View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4684_low_5 (Length: 388)

Name: NF4684_low_5
Description: NF4684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4684_low_5
NF4684_low_5
[»] chr3 (30 HSPs)
chr3 (16-373)||(30380621-30380975)
chr3 (244-373)||(44654802-44654931)
chr3 (242-373)||(20704428-20704559)
chr3 (242-373)||(14634051-14634182)
chr3 (243-359)||(44654616-44654731)
chr3 (243-373)||(20704626-20704756)
chr3 (247-348)||(30381068-30381169)
chr3 (247-358)||(26479239-26479350)
chr3 (240-317)||(26479066-26479143)
chr3 (240-361)||(54317942-54318062)
chr3 (282-348)||(14633890-14633956)
chr3 (329-373)||(4521780-4521825)
chr3 (277-373)||(2796212-2796308)
chr3 (333-373)||(33689678-33689718)
chr3 (248-348)||(54896241-54896340)
chr3 (334-373)||(9294257-9294296)
chr3 (334-373)||(23458278-23458317)
chr3 (334-373)||(26463897-26463936)
chr3 (278-373)||(33156293-33156388)
chr3 (334-373)||(40758234-40758273)
chr3 (334-373)||(51994185-51994224)
chr3 (335-373)||(8041707-8041745)
chr3 (335-373)||(10770759-10770797)
chr3 (335-373)||(36314566-36314604)
chr3 (335-373)||(48322645-48322683)
chr3 (335-373)||(54466514-54466552)
chr3 (329-373)||(42854520-42854562)
chr3 (251-358)||(32431506-32431613)
chr3 (277-373)||(40506086-40506182)
chr3 (329-373)||(41988047-41988091)
[»] chr7 (26 HSPs)
chr7 (242-373)||(15714591-15714722)
chr7 (243-348)||(23608984-23609089)
chr7 (244-321)||(23608808-23608885)
chr7 (242-371)||(7354860-7354989)
chr7 (252-348)||(15714404-15714499)
chr7 (277-373)||(40379802-40379898)
chr7 (334-373)||(6253561-6253600)
chr7 (334-373)||(10935884-10935923)
chr7 (334-373)||(23181293-23181332)
chr7 (334-373)||(24388909-24388948)
chr7 (243-373)||(13311332-13311461)
chr7 (273-359)||(20426643-20426729)
chr7 (246-315)||(7356555-7356623)
chr7 (243-288)||(20563733-20563778)
chr7 (277-373)||(28469307-28469403)
chr7 (334-373)||(17102110-17102149)
chr7 (328-359)||(20425562-20425593)
chr7 (334-373)||(27396894-27396933)
chr7 (334-373)||(27991829-27991868)
chr7 (334-373)||(32053442-32053481)
chr7 (334-373)||(42731509-42731548)
chr7 (244-358)||(18855968-18856082)
chr7 (335-373)||(30948428-30948466)
chr7 (335-373)||(32680863-32680901)
chr7 (334-374)||(19204579-19204619)
chr7 (242-314)||(32687395-32687467)
[»] chr2 (29 HSPs)
chr2 (247-373)||(11721389-11721515)
chr2 (244-373)||(17266398-17266527)
chr2 (247-373)||(11689544-11689670)
chr2 (243-375)||(16105551-16105683)
chr2 (240-371)||(6846780-6846911)
chr2 (246-348)||(11721195-11721297)
chr2 (242-374)||(17266628-17266762)
chr2 (252-371)||(6848035-6848154)
chr2 (244-359)||(11349518-11349633)
chr2 (242-348)||(10841700-10841806)
chr2 (246-348)||(11689762-11689864)
chr2 (247-373)||(2940938-2941065)
chr2 (270-373)||(10840502-10840605)
chr2 (241-354)||(28230057-28230170)
chr2 (246-313)||(3229720-3229787)
chr2 (334-373)||(6657968-6658007)
chr2 (334-373)||(11163322-11163361)
chr2 (334-373)||(15848178-15848217)
chr2 (334-373)||(16099145-16099184)
chr2 (334-373)||(37895646-37895685)
chr2 (334-373)||(39423605-39423644)
chr2 (334-373)||(39498400-39498439)
chr2 (334-373)||(44714060-44714099)
chr2 (335-373)||(14900751-14900789)
chr2 (335-373)||(33739794-33739832)
chr2 (242-358)||(202670-202786)
chr2 (334-371)||(2318248-2318285)
chr2 (240-289)||(44364462-44364510)
chr2 (243-295)||(28228669-28228721)
[»] chr4 (30 HSPs)
chr4 (244-373)||(11857892-11858021)
chr4 (244-348)||(7280209-7280313)
chr4 (243-373)||(7280405-7280535)
chr4 (246-359)||(11858102-11858216)
chr4 (244-356)||(32062589-32062701)
chr4 (328-373)||(48529875-48529920)
chr4 (247-372)||(52298286-52298411)
chr4 (282-373)||(14801774-14801865)
chr4 (273-373)||(51692582-51692682)
chr4 (277-373)||(43155795-43155891)
chr4 (277-373)||(53701845-53701941)
chr4 (237-373)||(40387460-40387596)
chr4 (329-373)||(52298111-52298155)
chr4 (334-373)||(13058127-13058166)
chr4 (334-373)||(23613399-23613438)
chr4 (334-373)||(24711201-24711240)
chr4 (244-358)||(30641520-30641632)
chr4 (334-373)||(34765679-34765718)
chr4 (334-373)||(36009112-36009151)
chr4 (334-373)||(44967337-44967376)
chr4 (334-373)||(49879475-49879514)
chr4 (334-373)||(50418936-50418975)
chr4 (335-373)||(4982994-4983032)
chr4 (335-373)||(9145034-9145072)
chr4 (335-373)||(27934623-27934661)
chr4 (335-373)||(42738299-42738337)
chr4 (246-295)||(37800954-37801003)
chr4 (242-294)||(11446268-11446320)
chr4 (242-358)||(32063650-32063766)
chr4 (329-373)||(48528557-48528601)
[»] chr1 (37 HSPs)
chr1 (244-373)||(42267303-42267432)
chr1 (269-373)||(22103805-22103909)
chr1 (252-373)||(13245858-13245979)
chr1 (244-374)||(9443572-9443702)
chr1 (244-373)||(21444597-21444723)
chr1 (253-373)||(10304154-10304274)
chr1 (247-373)||(10303926-10304052)
chr1 (246-348)||(19227183-19227285)
chr1 (238-359)||(42267513-42267638)
chr1 (240-359)||(22103606-22103724)
chr1 (252-358)||(32927266-32927372)
chr1 (330-374)||(16970833-16970877)
chr1 (334-373)||(43758912-43758951)
chr1 (333-373)||(183490-183530)
chr1 (329-361)||(19227047-19227079)
chr1 (333-373)||(25647973-25648013)
chr1 (242-358)||(32132302-32132418)
chr1 (329-373)||(34849096-34849140)
chr1 (329-373)||(34850364-34850408)
chr1 (277-373)||(42248506-42248602)
chr1 (334-373)||(1103551-1103590)
chr1 (334-373)||(6367652-6367691)
chr1 (334-373)||(14879061-14879100)
chr1 (334-373)||(24009840-24009879)
chr1 (330-373)||(25065929-25065972)
chr1 (334-373)||(40210669-40210708)
chr1 (334-373)||(40772597-40772636)
chr1 (247-317)||(4566960-4567030)
chr1 (306-348)||(21444802-21444844)
chr1 (335-373)||(24905435-24905473)
chr1 (335-373)||(28011454-28011492)
chr1 (335-373)||(31514585-31514623)
chr1 (335-373)||(33442862-33442900)
chr1 (276-373)||(19017928-19018025)
chr1 (242-295)||(32928191-32928244)
chr1 (279-359)||(13246060-13246140)
chr1 (333-373)||(47999391-47999431)
[»] chr5 (32 HSPs)
chr5 (244-373)||(12904754-12904883)
chr5 (244-373)||(14849006-14849135)
chr5 (245-374)||(15644725-15644854)
chr5 (242-373)||(14848737-14848868)
chr5 (243-358)||(15645026-15645141)
chr5 (237-372)||(5326050-5326185)
chr5 (244-351)||(4700433-4700540)
chr5 (277-373)||(38475298-38475394)
chr5 (244-373)||(5326318-5326447)
chr5 (242-358)||(24141450-24141566)
chr5 (281-373)||(38442105-38442197)
chr5 (334-374)||(6150544-6150584)
chr5 (277-373)||(39453333-39453429)
chr5 (334-373)||(3529141-3529180)
chr5 (334-373)||(5993979-5994018)
chr5 (334-373)||(8322494-8322533)
chr5 (334-373)||(14194722-14194761)
chr5 (334-373)||(28269687-28269726)
chr5 (334-373)||(28771137-28771176)
chr5 (334-373)||(29646661-29646700)
chr5 (334-373)||(32242332-32242371)
chr5 (334-373)||(35512238-35512277)
chr5 (334-373)||(35920483-35920522)
chr5 (242-313)||(40148896-40148967)
chr5 (335-373)||(297282-297320)
chr5 (335-373)||(6758133-6758171)
chr5 (335-373)||(31482670-31482708)
chr5 (335-373)||(41930607-41930645)
chr5 (334-374)||(11761839-11761879)
chr5 (333-373)||(18247173-18247213)
chr5 (334-374)||(18670289-18670329)
chr5 (334-370)||(24547427-24547463)
[»] chr8 (27 HSPs)
chr8 (246-373)||(22890293-22890420)
chr8 (252-361)||(20050091-20050200)
chr8 (251-373)||(24085780-24085903)
chr8 (247-359)||(22890101-22890212)
chr8 (269-373)||(11291210-11291313)
chr8 (243-348)||(11291026-11291131)
chr8 (240-357)||(13084802-13084919)
chr8 (245-373)||(31873198-31873326)
chr8 (239-373)||(9499897-9500030)
chr8 (277-373)||(36928509-36928605)
chr8 (244-358)||(2535864-2535978)
chr8 (247-348)||(10794178-10794279)
chr8 (284-373)||(22943947-22944036)
chr8 (277-373)||(23663813-23663909)
chr8 (277-373)||(39071709-39071805)
chr8 (334-373)||(1425321-1425360)
chr8 (240-295)||(2693686-2693741)
chr8 (334-373)||(16388825-16388864)
chr8 (334-373)||(23698543-23698582)
chr8 (334-373)||(35756672-35756711)
chr8 (334-373)||(38862708-38862747)
chr8 (335-373)||(3041724-3041762)
chr8 (335-373)||(36325325-36325363)
chr8 (335-373)||(38845567-38845605)
chr8 (335-373)||(40775918-40775956)
chr8 (335-373)||(44407125-44407163)
chr8 (336-373)||(31608812-31608849)
[»] chr6 (12 HSPs)
chr6 (247-371)||(33648766-33648889)
chr6 (252-348)||(1215015-1215111)
chr6 (249-373)||(1215165-1215289)
chr6 (246-359)||(13378527-13378640)
chr6 (242-348)||(33648567-33648672)
chr6 (334-373)||(12080726-12080765)
chr6 (334-373)||(30803951-30803990)
chr6 (334-373)||(33517624-33517663)
chr6 (277-359)||(26463212-26463294)
chr6 (335-373)||(28000653-28000691)
chr6 (335-373)||(30337540-30337578)
chr6 (240-289)||(22054077-22054125)
[»] scaffold0041 (1 HSPs)
scaffold0041 (247-350)||(11308-11410)
[»] scaffold0181 (2 HSPs)
scaffold0181 (245-359)||(9416-9530)
scaffold0181 (244-373)||(9207-9335)
[»] scaffold0100 (2 HSPs)
scaffold0100 (277-361)||(31217-31301)
scaffold0100 (247-348)||(31023-31124)
[»] scaffold0117 (1 HSPs)
scaffold0117 (244-360)||(15761-15876)
[»] scaffold0184 (1 HSPs)
scaffold0184 (243-373)||(8156-8285)
[»] scaffold0182 (1 HSPs)
scaffold0182 (246-348)||(31627-31728)
[»] scaffold0005 (1 HSPs)
scaffold0005 (282-373)||(37862-37953)
[»] scaffold0291 (1 HSPs)
scaffold0291 (244-321)||(6499-6576)
[»] scaffold0031 (1 HSPs)
scaffold0031 (277-373)||(68998-69094)
[»] scaffold0027 (1 HSPs)
scaffold0027 (282-374)||(14089-14180)
[»] scaffold0220 (1 HSPs)
scaffold0220 (243-314)||(23230-23301)
[»] scaffold0007 (1 HSPs)
scaffold0007 (334-373)||(1859-1898)
[»] scaffold0559 (1 HSPs)
scaffold0559 (335-373)||(1324-1362)
[»] scaffold0024 (1 HSPs)
scaffold0024 (335-373)||(141862-141900)
[»] scaffold0020 (1 HSPs)
scaffold0020 (335-373)||(139763-139801)
[»] scaffold0295 (1 HSPs)
scaffold0295 (333-373)||(2232-2272)


Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 373
Target Start/End: Original strand, 30380621 - 30380975
Alignment:
Q  16 agaagaaagcataaaggtaacaaatgagtgaatagtgttgtaatagtaatagtaaccgtaaaagtgagtaa-gagaaggttttggtgttacttgaagtga 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  30380621 agaagaaagcataaag-taacaaatgagtgaatagtgttgtaatagtaatagtaaccgtaaaagcgagtaaagagaaggttttggtgttacttgaagtga 30380719  T
Q  115 aaatgagaagaggaatggtttgagcgcgaatgaaaacttcccgccatgtgatgtcctacaaatttgtttgggcagtgaggtggccctaagccatataagt 214  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||    
T  30380720 aaatgagaagaggaaaggtttgagcgcgaatgaaaacttcccgccatgtgatgtcctacaaatttgtttgggctgtgaggtggccctaagcc--ataagt 30380817  T
Q  215 gaaatatttgtactcnnnnnnnatattaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctg 314  Q
    |||||||||||||||       |||||||  ||||||||||||||||||  || |||||||  ||||||||||||||||| ||||| ||  |||||||||    
T  30380818 gaaatatttgtactctttttttatattaa-acttttatatgtgtttagtttctgtaaataggagtcatttaaaaattggtttttgtttttcttaatcctg 30380916  T
Q  315 acatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    | |||||  | |||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  30380917 atattttgtcatgtcaaaatttaatcatttaaaatttcgtccctctgtccacttgatca 30380975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 244 - 373
Target Start/End: Complemental strand, 44654931 - 44654802
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||| |||  ||||||| | |||| || ||||||  | || |||||||||||||||    
T  44654931 ggcttttatatgtgtttagtccctgcaaataggggtcatttaaaaatttgtccatgtattcctaaatcatggcattttggcctgccaaaatttaatcact 44654832  T
Q  344 taaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||||||||| ||| |||||||    
T  44654831 taaaatttcgtccctctccccatttaatca 44654802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 242 - 373
Target Start/End: Original strand, 20704428 - 20704559
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca 341  Q
    ||||||||||||||||||||||||||  |||||   |||||||||||| ||||   | ||||| |||||| ||||||||| || || |||||||||||||    
T  20704428 aaggcttttatatgtgtttagtccctgcaaataagagtcatttaaaaaatggttcctatattccttaatcttgacattttgccctgccaaaatttaatca 20704527  T
Q  342 cttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||| |||||||||| |||||||||||    
T  20704528 cttaaaattccgtccctctccccacttaatca 20704559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 373
Target Start/End: Complemental strand, 14634182 - 14634051
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca 341  Q
    ||||||||||||| |||||||||| |  |||||| |||||||||||||||||||  ||||||| ||||||  | |||||| || || |||||||||||||    
T  14634182 aaggcttttatatatgtttagtccttgcaaataggggtcatttaaaaattggtccctgtattccttaatcgaggcattttgccctgccaaaatttaatca 14634083  T
Q  342 cttaaaatttcgtccctctctccacttaatca 373  Q
    || ||| |||||||| |||| |||||||||||    
T  14634082 ctaaaactttcgtccttctccccacttaatca 14634051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 243 - 359
Target Start/End: Original strand, 44654616 - 44654731
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcac 342  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||  ||||||  ||||| | | ||||||| | || ||||||||||||||    
T  44654616 aggcttttatatgtgtttagtccctgtaaataggggtcatttaaaaaatggtccatgtatttcttaattcaggcattttttcctg-caaaatttaatcac 44654714  T
Q  343 ttaaaatttcgtccctc 359  Q
    |||||| || |||||||    
T  44654715 ttaaaaattggtccctc 44654731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 373
Target Start/End: Complemental strand, 20704756 - 20704626
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcac 342  Q
    |||||||||||||||||||| ||||  |||||| | | ||||||||| ||||   ||||||  |||||||||  ||||| |  || ||||||||||||||    
T  20704756 aggcttttatatgtgtttagcccctgcaaatagggattatttaaaaaatggttcatgtatttcttaatcctggtattttgctctgccaaaatttaatcac 20704657  T
Q  343 ttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||||||||  |||||||||||    
T  20704656 ttaaaatttcgtccctcttcccacttaatca 20704626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 348
Target Start/End: Complemental strand, 30381169 - 30381068
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||| ||||||||||||| | |||||||  |||||||||||| |||||  ||||||||||||| ||| |||||| || || ||||||||||||| ||||    
T  30381169 ttttacatgtgtttagtccttgtaaataggagtcatttaaaaaatggtccatgtattctttaattctggcattttgccctgccaaaatttaatcatttaa 30381070  T
Q  347 aa 348  Q
    ||    
T  30381069 aa 30381068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 358
Target Start/End: Complemental strand, 26479350 - 26479239
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||| || |||||| || ||   | || |  |||| |||||||||||||    
T  26479350 ttttatatgtgtttagtccctgtaaataggggtcatttaaaaaatggtctctgtaatccttaatcgtggcaacctgccctcccaaagtttaatcacttaa 26479251  T
Q  347 aatttcgtccct 358  Q
    ||||| ||||||    
T  26479250 aattttgtccct 26479239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 26479066 - 26479143
Alignment:
Q  240 ttaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgaca 317  Q
    ||||||||||||||||||||||||||||  |||||| ||| ||||||||| |||||  |||| || ||||||||||||    
T  26479066 ttaaggcttttatatgtgtttagtccctgcaaataggggtgatttaaaaaatggtccatgtaatcgttaatcctgaca 26479143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 361
Target Start/End: Complemental strand, 54318062 - 54317942
Alignment:
Q  240 ttaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaat 339  Q
    |||||||||||||||||||||||||| |  |||||   ||||||||| || |||||  ||||||| ||||| |||||| ||| || |  |||||||||||    
T  54318062 ttaaggcttttatatgtgtttagtccttgcaaatatgagtcatttaagaaatggtccatgtattcgttaatactgacaatttacc-tcccaaaatttaat 54317964  T
Q  340 cacttaaaatttcgtccctctc 361  Q
    || ||||||||||||| |||||    
T  54317963 catttaaaatttcgtctctctc 54317942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 14633890 - 14633956
Alignment:
Q  282 tttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaa 348  Q
    |||||||| |||||| ||||||||||||||||||||||||  | |  ||||||||||||||||||||    
T  14633890 tttaaaaaatggtctatgtattctttaatcctgacattttgtcctaccaaaatttaatcacttaaaa 14633956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 4521825 - 4521780
Alignment:
Q  329 caaaatttaatcacttaaaatttcgtccctct-ctccacttaatca 373  Q
    |||||||||||||||||||||||||||||||| | |||||||||||    
T  4521825 caaaatttaatcacttaaaatttcgtccctctcccccacttaatca 4521780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 2796212 - 2796308
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||||||||||  |||| ||  |||||||| || ||| || |  ||   |||||||| ||||||||||||||||||| |||||||||||    
T  2796212 ggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 2796308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 33689718 - 33689678
Alignment:
Q  333 atttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  33689718 atttaatcatttaaaatttcgtccctctccccacttaatca 33689678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 348
Target Start/End: Complemental strand, 54896340 - 54896241
Alignment:
Q  248 tttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaa 347  Q
    ||||||| |||||| |||||  |||||   ||||||||||| |||||| | ||||||||||||  || |||||| |||||  ||||||||||||||||||    
T  54896340 tttatatatgtttaatccctgcaaatatgagtcatttaaaatttggtcat-gtattctttaattatggcattttgccttgctaaaatttaatcacttaaa 54896242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 9294296 - 9294257
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  9294296 tttaatcatttaaaatttcgtccctctccccacttaatca 9294257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 23458317 - 23458278
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  23458317 tttaatcatttaaaatttcgtccctctccccacttaatca 23458278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 26463936 - 26463897
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  26463936 tttaatcatttaaaatttcgtccctctccccacttaatca 26463897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 33156388 - 33156293
Alignment:
Q  278 gtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||||| ||| ||||| || |||||| || || ||| || | |||   |||||||| ||||||||||||||||| | |||||||||||    
T  33156388 gtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaaaatttcgtccctccccccacttaatca 33156293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 40758234 - 40758273
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  40758234 tttaatcatttaaaatttcgtccctctccccacttaatca 40758273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 51994224 - 51994185
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  51994224 tttaatcatttaaaatttcgtccctctccccacttaatca 51994185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 8041707 - 8041745
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  8041707 ttaatcatttaaaatttcgtccctctccccacttaatca 8041745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 10770797 - 10770759
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  10770797 ttaatcatttaaaatttcgtccctctccccacttaatca 10770759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 36314604 - 36314566
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  36314604 ttaatcatttaaaatttcgtccctctccccacttaatca 36314566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 48322683 - 48322645
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  48322683 ttaatcatttaaaatttcgtccctctccccacttaatca 48322645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 54466514 - 54466552
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  54466514 ttaatcatttaaaatttcgtccctctccccacttaatca 54466552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 42854520 - 42854562
Alignment:
Q  329 caaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||    
T  42854520 caaaatttaatcatttaaaatttcgt--ctctctccacttaatca 42854562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 358
Target Start/End: Complemental strand, 32431613 - 32431506
Alignment:
Q  251 atatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacattttt-ccttgtcaaaatttaatcacttaaaat 349  Q
    |||||| ||| |||||| ||| ||| |||||||||||||||||||  || | || ||||||||||||  ||  ||||| |||| ||||| || |||||||    
T  32431613 atatgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttg-caaagtttaaccatttaaaat 32431515  T
Q  350 ttcgtccct 358  Q
    |||||||||    
T  32431514 ttcgtccct 32431506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 40506182 - 40506086
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||| |||||   |||| || |||||||||||| ||| || |  ||  ||||||||| ||||||||||||| |||||  ||||||||||    
T  40506182 ggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcatttaaaatttcgtctctctccgcacttaatca 40506086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 41988047 - 41988091
Alignment:
Q  329 caaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||| ||||||||||||| |||||  ||||||||||    
T  41988047 caaaatttaatcatttaaaatttcgtctctctcctcacttaatca 41988091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 242 - 373
Target Start/End: Complemental strand, 15714722 - 15714591
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca 341  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||||||||||| || |||| |||||||||||||||| || || ||| |||||||||    
T  15714722 aaggcttttatatgtgtttagtccctgcaaataggggtcatttaaaaattggtctctgcattccttaatcctgacattttgccctgccaagatttaatca 15714623  T
Q  342 cttaaaatttcgtccctctctccacttaatca 373  Q
    ||||| ||||||| |||||| | |||||||||    
T  15714622 cttaacatttcgttcctctccctacttaatca 15714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 243 - 348
Target Start/End: Complemental strand, 23609089 - 23608984
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcac 342  Q
    ||||||||||||||||||| |||||  |||||| | ||||||||||| |||||  | ||||| |||||||||||||||| | ||||||||||||||||||    
T  23609089 aggcttttatatgtgtttaatccctgcaaatagggatcatttaaaaaatggtccctatattccttaatcctgacattttgcattgtcaaaatttaatcac 23608990  T
Q  343 ttaaaa 348  Q
    ||||||    
T  23608989 ttaaaa 23608984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 23608808 - 23608885
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttt 321  Q
    |||||||||||||||||||||| |  |||||| |||||||||||||||||||  ||||||  ||||||||| ||||||    
T  23608808 ggcttttatatgtgtttagtccttgcaaataggggtcatttaaaaattggtccctgtatttcttaatcctggcatttt 23608885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 371
Target Start/End: Original strand, 7354860 - 7354989
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca 341  Q
    |||||||||||| ||||||||| |||  |||||| |||||||||||||||||||  | ||||| |||||| || |||||| ||     |  |||||||||    
T  7354860 aaggcttttatacgtgtttagttcctgcaaataggggtcatttaaaaattggtccctatattcgttaatcgtggcattttgcccctaaactatttaatca 7354959  T
Q  342 cttaaaatttcgtccctctctccacttaat 371  Q
     ||||||||| ||||||| | |||||||||    
T  7354960 tttaaaatttggtccctccccccacttaat 7354989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 15714404 - 15714499
Alignment:
Q  252 tatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaa 348  Q
    ||||||||||||||||  |||||  |||||||||||||| | || | |||||| ||||||||| |||||| || || |||||||| |||||||||||    
T  15714404 tatgtgtttagtccctgcaaatatgggtcatttaaaaatggttcat-gtattccttaatcctggcattttgccctgccaaaatttcatcacttaaaa 15714499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 40379802 - 40379898
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| |||||||||||||||||||||||  |||||||  || ||| ||||   |   |||||||| ||||||||||||||||||| |||||||||||    
T  40379802 ggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaaatttcgtccctctccccacttaatca 40379898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 6253561 - 6253600
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  6253561 tttaatcatttaaaatttcgtccctctctccacttaatca 6253600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 10935884 - 10935923
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  10935884 tttaatcatttaaaatttcgtccctctctccacttaatca 10935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 23181332 - 23181293
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  23181332 tttaatcatttaaaatttcgtccctctctccacttaatca 23181293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 24388909 - 24388948
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  24388909 tttaatcacttaaaatttcgtccctctccccacttaatca 24388948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 373
Target Start/End: Complemental strand, 13311461 - 13311332
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcac 342  Q
    |||||||||||  ||||||||||  | |||||| ||||||||||| | ||||   ||||||| |||||| | ||| ||| || |  ||||||||||| |     
T  13311461 aggcttttatacatgtttagtcctac-aaataggggtcatttaaacaatggttcatgtattcgttaatcttaacaatttgcccttccaaaatttaataat 13311363  T
Q  343 ttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||||||||| | |||||||||    
T  13311362 ttaaaatttcgtccctctcccgacttaatca 13311332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 359
Target Start/End: Complemental strand, 20426729 - 20426643
Alignment:
Q  273 tagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctc 359  Q
    |||||||| ||||||||||||||  |||||||  |||||||| |||||| || |  |||| |||||||| ||||||||| |||||||    
T  20426729 tagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccctcacaaagtttaatcatttaaaatttagtccctc 20426643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 315
Target Start/End: Complemental strand, 7356623 - 7356555
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctga 315  Q
    |||||||||||||||| ||||| ||||||| |||||||| ||||||||||  ||||||  ||||||||||    
T  7356623 cttttatatgtgtttaatccctgtaaataggggtcattt-aaaattggtccctgtatttgttaatcctga 7356555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 20563733 - 20563778
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaa 288  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||    
T  20563733 aggcttttatatgtgtttagtccctgcaaataggggtcatttaaaa 20563778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 28469403 - 28469307
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| ||||||||||||||  |||| || ||||||||| || ||| || |  ||   |||||||| ||||||||||||||||||| |||||||||||    
T  28469403 ggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 28469307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 17102110 - 17102149
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  17102110 tttaatcatttaaaatttcgtccctctccccacttaatca 17102149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 359
Target Start/End: Original strand, 20425562 - 20425593
Alignment:
Q  328 tcaaaatttaatcacttaaaatttcgtccctc 359  Q
    ||||||||||||||||||||||||||||||||    
T  20425562 tcaaaatttaatcacttaaaatttcgtccctc 20425593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 27396933 - 27396894
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  27396933 tttaatcatttaaaatttcgtccctctccccacttaatca 27396894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 27991829 - 27991868
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  27991829 tttaatcatttaaaatttcgtccctctccccacttaatca 27991868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 32053481 - 32053442
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  32053481 tttaatcatttaaaatttcgtccctctccccacttaatca 32053442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 42731509 - 42731548
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  42731509 tttaatcatttaaaatttcgtccctctccccacttaatca 42731548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 18856082 - 18855968
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    |||||| |||| ||||| ||||||  || ||| |||||||||||||||||||  |||| || |||||| || ||  || || |  |||| |||||||| |    
T  18856082 ggctttgatatatgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatt 18855983  T
Q  344 taaaatttcgtccct 358  Q
    |||||||||||||||    
T  18855982 taaaatttcgtccct 18855968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 30948466 - 30948428
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  30948466 ttaatcatttaaaatttcgtccctctccccacttaatca 30948428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 32680901 - 32680863
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  32680901 ttaatcatttaaaatttcgtccctctccccacttaatca 32680863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 19204579 - 19204619
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatcat 374  Q
    |||||||| ||||||||| ||||||||| ||||||||||||    
T  19204579 tttaatcatttaaaattttgtccctctccccacttaatcat 19204619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 32687395 - 32687467
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctg 314  Q
    |||||||| |||||||||| |||| | ||| ||| |||||||||||| ||||||  |||| || |||||||||    
T  32687395 aaggctttaatatgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctg 32687467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 5e-32; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 247 - 373
Target Start/End: Complemental strand, 11721515 - 11721389
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||||||||||||||||  |  |||||| |||||||||||||||| ||  ||||||||||||||||||||||||  | || ||||||||||||||||||    
T  11721515 ttttatatgtgtttagtctttggaaataggggtcatttaaaaattgatccctgtattctttaatcctgacattttatcctgccaaaatttaatcacttaa 11721416  T
Q  347 aatttcgtccctctctccacttaatca 373  Q
    ||||||||| ||||| |||||||||||    
T  11721415 aatttcgtctctctccccacttaatca 11721389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 17266398 - 17266527
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||| |||||  ||||||| || ||||||||| |||||| |  ||||||||||||| |    
T  17266398 ggcttttatatgtgtttagtccctgtaaatagggatcatttaaaaaatggtcaatgtattcgtttatcctgacaattttcccttccaaaatttaatcatt 17266497  T
Q  344 taaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||| |||||||||||    
T  17266498 taaaatttggtccctctccccacttaatca 17266527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 373
Target Start/End: Original strand, 11689544 - 11689670
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||||||||||||||||| |  |||||| |||||||||||||||| ||  ||||||||||||||| | ||||||  | || ||||||||||||||||||    
T  11689544 ttttatatgtgtttagtccttggaaataggggtcatttaaaaattgatccctgtattctttaatcccggcattttgtcctgccaaaatttaatcacttaa 11689643  T
Q  347 aatttcgtccctctctccacttaatca 373  Q
    |||||||||| |||| |||||||||||    
T  11689644 aatttcgtccatctccccacttaatca 11689670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 375
Target Start/End: Original strand, 16105551 - 16105683
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcac 342  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||| |||||  || |||| |||||||||||||||| || |  |||||||||||||     
T  16105551 aggcttttatatgtgtttagtccctgtaaataggggccatttaaaaaatggtccctgcattccttaatcctgacattttgccctcccaaaatttaatcat 16105650  T
Q  343 ttaaaatttcgtccctctctccacttaatcatg 375  Q
    ||||||||| ||| ||| | |||||||||||||    
T  16105651 ttaaaatttagtctctccccccacttaatcatg 16105683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 240 - 371
Target Start/End: Original strand, 6846780 - 6846911
Alignment:
Q  240 ttaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttt-tccttgtcaaaatttaa 338  Q
    |||||||||||||||||||||| |||||  |||||| ||||||||||||||||||| ||| |||| ||||||| | |||||| ||| || ||||||| ||    
T  6846780 ttaaggcttttatatgtgtttaatccctgcaaataggggtcatttaaaaattggtccttgaattcgttaatccgggcattttgtccctg-caaaattgaa 6846878  T
Q  339 tcacttaaaatttcgtccctctctccacttaat 371  Q
    ||| ||||||||||||||||||  |||||||||    
T  6846879 tcatttaaaatttcgtccctcttcccacttaat 6846911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 11721195 - 11721297
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactta 345  Q
    ||||||||| |||||||||| |  |||||| ||||||||||||| || || |||||||||||||||||  |||||| || || |||||||||||||||||    
T  11721195 cttttatatatgtttagtccttggaaataggggtcatttaaaaaatgatccttgtattctttaatcctagcattttgccctgccaaaatttaatcactta 11721294  T
Q  346 aaa 348  Q
    |||    
T  11721295 aaa 11721297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 242 - 374
Target Start/End: Complemental strand, 17266762 - 17266628
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagagg-tcatttaaaaat-tggtctttgtattctttaatcctgacatttttccttgtcaaaatttaat 339  Q
    |||||||||||||||||||||| |||  |||||| || |||||||||||  |||||| ||||||| |||||| ||||| ||| || |  |||||||||||    
T  17266762 aaggcttttatatgtgtttagttcctgcaaatagggggtcatttaaaaaaatggtctctgtattcgttaatcttgacaatttgccctcccaaaatttaat 17266663  T
Q  340 cacttaaaatttcgtccctctctccacttaatcat 374  Q
    || |||||||||||||  |||| ||||||||||||    
T  17266662 catttaaaatttcgtcattctccccacttaatcat 17266628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 371
Target Start/End: Complemental strand, 6848154 - 6848035
Alignment:
Q  252 tatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttt-tccttgtcaaaatttaatcacttaaaatt 350  Q
    |||||||||| || ||  |||||  ||||||||||||||||||| ||| |||| |||||||||||||||| ||| ||  |||||||||||| ||||||||    
T  6848154 tatgtgtttactctctgcaaataagggtcatttaaaaattggtcattgaattcgttaatcctgacattttgtccctg-aaaaatttaatcatttaaaatt 6848056  T
Q  351 tcgtccctctctccacttaat 371  Q
    |||||| || | |||||||||    
T  6848055 tcgtccatcaccccacttaat 6848035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 359
Target Start/End: Complemental strand, 11349633 - 11349518
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgaca-tttttccttgtcaaaatttaatcac 342  Q
    |||||||||||||||||||||||   ||||||  ||||||||||| ||| |||||| |||| |||||||||||| ||| | | | | ||||||||||||     
T  11349633 ggcttttatatgtgtttagtcccagcaaataggagtcatttaaaatttgatctttgaattcgttaatcctgacagtttgtacctat-aaaatttaatcat 11349535  T
Q  343 ttaaaatttcgtccctc 359  Q
    |||||||||||||||||    
T  11349534 ttaaaatttcgtccctc 11349518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 10841806 - 10841700
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca 341  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||| ||  ||  || |||| ||||||||| |||||| ||   ||||||||||||||    
T  10841806 aaggcttttatatgtgtttagtccctgcaaataggggtcatttaaaattttatccctgaattcgttaatcctggcattttgccacttcaaaatttaatca 10841707  T
Q  342 cttaaaa 348  Q
     ||||||    
T  10841706 tttaaaa 10841700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 11689864 - 11689762
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactta 345  Q
    ||||||||||| |||||||| |  ||| |  ||||||||||||| |||||||||||||||||||||||  || |||  | || |||||||||||||||||    
T  11689864 cttttatatgtatttagtccttggaaacatgggtcatttaaaaaatggtctttgtattctttaatcctagcaatttgtcctgccaaaatttaatcactta 11689765  T
Q  346 aaa 348  Q
    |||    
T  11689764 aaa 11689762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 373
Target Start/End: Original strand, 2940938 - 2941065
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||  || |||  ||||||||  ||||||  |    ||||||||| ||| ||||    
T  2940938 ttttatatgtgtttagtccctgtaaataggggtcatttaaaatttggtccctgaatttgttaatcctagcattttatcactacaaaatttattcatttaa 2941037  T
Q  347 aatttcgtccctct-ctccacttaatca 373  Q
    ||||| |||||||| | |||||||||||    
T  2941038 aatttggtccctctcccccacttaatca 2941065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 373
Target Start/End: Original strand, 10840502 - 10840605
Alignment:
Q  270 aaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccactta 369  Q
    |||||| |||||||||||| |||||   |  |||| |||||||||||||||| ||   |||||||||||||| ||||| ||||||||||||  |||||||    
T  10840502 aaataggggtcatttaaaatttggttccttaattcattaatcctgacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccactta 10840601  T
Q  370 atca 373  Q
    ||||    
T  10840602 atca 10840605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 354
Target Start/End: Complemental strand, 28230170 - 28230057
Alignment:
Q  241 taaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatc 340  Q
    ||||||||| |||||||||| |||||| ||| ||  |||||||||||||||||||  |||| || ||||||||  ||  || || | ||||| |||||||    
T  28230170 taaggctttaatatgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatc 28230071  T
Q  341 acttaaaatttcgt 354  Q
    | ||||||||||||    
T  28230070 atttaaaatttcgt 28230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 3229787 - 3229720
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcct 313  Q
    ||||||||||| |||||||||| ||||||  |||||||||||| |||||| ||||||||  |||||||    
T  3229787 cttttatatgtttttagtccctgtaaataagggtcatttaaaatttggtccttgtattcgctaatcct 3229720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 6657968 - 6658007
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  6657968 tttaatcatttaaaatttcgtccctctccccacttaatca 6658007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 11163361 - 11163322
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  11163361 tttaatcatttaaaatttcgtccctctccccacttaatca 11163322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 15848178 - 15848217
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  15848178 tttaatcatttaaaatttcgtccctctccccacttaatca 15848217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 16099145 - 16099184
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  16099145 tttaatcatttaaaatttcgtccctctccccacttaatca 16099184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 37895685 - 37895646
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  37895685 tttaatcatttaaaatttcgtccctctccccacttaatca 37895646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 39423605 - 39423644
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  39423605 tttaatcatttaaaatttcgtccctctccccacttaatca 39423644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 39498400 - 39498439
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  39498400 tttaatcatttaaaatttcgtccctctccccacttaatca 39498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 44714099 - 44714060
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  44714099 tttaatcatttaaaatttcgtccctctccccacttaatca 44714060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 14900789 - 14900751
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  14900789 ttaatcatttaaaatttcgtccctctccccacttaatca 14900751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 33739794 - 33739832
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  33739794 ttaatcatttaaaatttcgtccctctccccacttaatca 33739832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 358
Target Start/End: Complemental strand, 202786 - 202670
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgac-atttttccttgtcaaaatttaatc 340  Q
    |||| ||| |||||||||| |||||| ||| ||| ||||||||||||||| |||  |||| || ||||||||| | | ||  ||||| || | |||||||    
T  202786 aaggttttaatatgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttg-cagagtttaatc 202688  T
Q  341 acttaaaatttcgtccct 358  Q
    | ||||||||||||||||    
T  202687 atttaaaatttcgtccct 202670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 371
Target Start/End: Original strand, 2318248 - 2318285
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaat 371  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  2318248 tttaatcatttaaaatttcgtccctctccccacttaat 2318285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 44364462 - 44364510
Alignment:
Q  240 ttaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaa 289  Q
    ||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  44364462 ttaaggcttttatatgtgtttagtccctgcaaatag-gttcatttaaaaa 44364510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 28228669 - 28228721
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtc 295  Q
    ||||||| |||||||||| ||||||  || ||| |||||||||||||||||||    
T  28228669 aggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtc 28228721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 11857892 - 11858021
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||  ||||||| ||||||||| |||||| |  || |||||||||||||||    
T  11857892 ggcttttatatgtgtttagtccctgcaaatagaggtcatttaaaaaatggtccctgtattccttaatcctggcattttgctctgccaaaatttaatcact 11857991  T
Q  344 taaaatttcgtccctctctccacttaatca 373  Q
    ||||| || |||||||  ||||||||||||    
T  11857992 taaaaattggtccctcattccacttaatca 11858021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 7280209 - 7280313
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    ||||||||||| |||||||||| | ||||||| ||||||||||||| |||||| ||||||||||||||||| |||||| || ||||||||||||||||||    
T  7280209 ggcttttatatatgtttagtccttgtaaataggggtcatttaaaaaatggtctctgtattctttaatcctgtcattttgccctgtcaaaatttaatcact 7280308  T
Q  344 taaaa 348  Q
    |||||    
T  7280309 taaaa 7280313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 243 - 373
Target Start/End: Complemental strand, 7280535 - 7280405
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcac 342  Q
    |||||||||||||||||||   |||  ||||||   |||||| || | ||||| |||||||||||||| |||||||||| || |||||||||||||||||    
T  7280535 aggcttttatatgtgtttatatcctgcaaataggaatcattttaataatggtccttgtattctttaattctgacattttgccatgtcaaaatttaatcac 7280436  T
Q  343 ttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||  ||| ||||| |||||||||||    
T  7280435 ttaaaattatgtctctctccccacttaatca 7280405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 359
Target Start/End: Complemental strand, 11858216 - 11858102
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaa-ttggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactt 344  Q
    ||||||||||| ||||||||||  ||||||  |||||||||||| ||||||  ||||||| ||||||||| |||||| || |||||||||||||||||||    
T  11858216 cttttatatgtatttagtccctgcaaataggagtcatttaaaaaattggtccctgtattccttaatcctggcattttaccctgtcaaaatttaatcactt 11858117  T
Q  345 aaaatttcgtccctc 359  Q
    |||| || |||||||    
T  11858116 aaaaattggtccctc 11858102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 32062589 - 32062701
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgac-atttttccttgtcaaaatttaatcac 342  Q
    |||||| |||||||||| ||||||  || ||| ||||||||||||||||||| |||||  | ||||||||||| | ||  |||||| ||||||||||||     
T  32062589 ggctttaatatgtgtttggtccctgaaattaggggtcatttaaaaattggtccttgtaaacattaatcctgacaaattagccttgt-aaaatttaatcat 32062687  T
Q  343 ttaaaatttcgtcc 356  Q
    ||||||||||||||    
T  32062688 ttaaaatttcgtcc 32062701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 48529920 - 48529875
Alignment:
Q  328 tcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||    
T  48529920 tcaaaatttaatcatttaaaattttgtccctctctccacttaatca 48529875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 52298411 - 52298286
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||||||||||||||||| | ||||||| |||||||||||| |||||   || |||  ||||||||  ||||||  ||   ||||||||||||| ||||    
T  52298411 ttttatatgtgtttagtccttataaataggggtcatttaaaatttggttcctgaatttgttaatcctagcattttgtctatgcaaaatttaatcatttaa 52298312  T
Q  347 aatttcgtccctctctccacttaatc 372  Q
    |||||||| ||| || ||| ||||||    
T  52298311 aatttcgttcctatccccatttaatc 52298286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 14801774 - 14801865
Alignment:
Q  282 tttaaaaattggtctttgtattctttaatcctgacatttttcc-ttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||||||||||| ||  ||||||||||| ||| || |||| |   |||||||| ||||||||||||||||||| |||||||||||    
T  14801774 tttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgt-attgtttaatcatttaaaatttcgtccctctccccacttaatca 14801865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 373
Target Start/End: Original strand, 51692582 - 51692682
Alignment:
Q  273 tagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatc 372  Q
    |||||||| ||||||||||| ||| |||| ||  ||||||||||| ||| || |  ||   |||||||||||||||||||||||||||| |||||| |||    
T  51692582 tagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcacttaaaatttcgtccctctccccacttgatc 51692681  T
Q  373 a 373  Q
    |    
T  51692682 a 51692682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 43155891 - 43155795
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttt-tccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| ||||||||||||||  |||| || ||||||||| || ||| ||| || ||  ||||||||| ||||||||||||||||||| |||||||||||    
T  43155891 ggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctg-cattatttaatcatttaaaatttcgtccctctccccacttaatca 43155795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 53701845 - 53701941
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttt-tccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| ||||||||||| ||| |||| ||| ||||||||||| ||| |||||| ||   |||||||| |||||||||| |||||||| |||||||||||    
T  53701845 ggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttg-cattgtttaatcatttaaaatttcttccctctccccacttaatca 53701941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 373
Target Start/End: Original strand, 40387460 - 40387596
Alignment:
Q  237 atattaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaattt 336  Q
    ||||||||||||| ||||||||||  |||||  || ||| || ||||||||||||||||  |||||||  |||||||| ||  || ||    ||||| ||    
T  40387460 atattaaggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagtt 40387559  T
Q  337 aatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||| |||||||||||| |||||   ||||||||||    
T  40387560 aatcatttaaaatttcgttcctcttctcacttaatca 40387596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 52298111 - 52298155
Alignment:
Q  329 caaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||||    
T  52298111 caaaatttaatcatttaaaatttcgtctctctccccacttaatca 52298155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 13058127 - 13058166
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  13058127 tttaatcatttaaaatttcgtccctctccccacttaatca 13058166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 23613399 - 23613438
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  23613399 tttaatcatttaaaatttcgtccctctccccacttaatca 23613438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 24711201 - 24711240
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  24711201 tttaatcatttaaaatttcgtccctctccccacttaatca 24711240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 244 - 358
Target Start/End: Original strand, 30641520 - 30641632
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    |||||| |||||||||| ||||||| || ||| ||||||||||||||| |||  |||| || ||||||||  ||  || || |  |||| |||||||| |    
T  30641520 ggctttaatatgtgtttcgtccctccaattaggggtcatttaaaaatttgtc--tgtaatcgttaatccttgcaaattaccattacaaagtttaatcatt 30641617  T
Q  344 taaaatttcgtccct 358  Q
    |||||||||||||||    
T  30641618 taaaatttcgtccct 30641632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 34765718 - 34765679
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  34765718 tttaatcatttaaaatttcgtccctctccccacttaatca 34765679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 36009151 - 36009112
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  36009151 tttaatcatttaaaatttcgtccctctccccacttaatca 36009112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 44967376 - 44967337
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  44967376 tttaatcatttaaaatttcgtccctctccccacttaatca 44967337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 49879514 - 49879475
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  49879514 tttaatcatttaaaatttcgtccctctccccacttaatca 49879475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 50418975 - 50418936
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  50418975 tttaatcatttaaaatttcgtccctctccccacttaatca 50418936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 4983032 - 4982994
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  4983032 ttaatcatttaaaatttcgtccctctccccacttaatca 4982994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 9145072 - 9145034
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  9145072 ttaatcatttaaaatttcgtccctctccccacttaatca 9145034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 27934623 - 27934661
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  27934623 ttaatcatttaaaatttcgtccctctccccacttaatca 27934661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 42738337 - 42738299
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  42738337 ttaatcatttaaaatttcgtccctctccccacttaatca 42738299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 37801003 - 37800954
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtc 295  Q
    |||||| |||||||||||||||  |||||| ||||||||||||| |||||    
T  37801003 cttttacatgtgtttagtccctacaaataggggtcatttaaaaaatggtc 37800954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 11446268 - 11446320
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggt 294  Q
    ||||| || |||||||||| ||||||  || ||||||||||||||||||||||    
T  11446268 aaggcattaatatgtgtttcgtccctgcaattagaggtcatttaaaaattggt 11446320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 358
Target Start/End: Complemental strand, 32063766 - 32063650
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca 341  Q
    |||||||| |||||| ||| ||||||  || ||| |||||||||||||||||| | |||| || ||||| ||| ||  || || |  |||| ||||||||    
T  32063766 aaggctttaatatgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatca 32063667  T
Q  342 cttaaaatttcgtccct 358  Q
     |||||||| |||||||    
T  32063666 tttaaaattccgtccct 32063650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 48528557 - 48528601
Alignment:
Q  329 caaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||| |||||||||||| ||| || |||||||||||    
T  48528557 caaaatttaatcatttaaaatttcgttcctatccccacttaatca 48528601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 42267303 - 42267432
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    |||||||||||||||||| |||||  |||||| |||||||||||||||||||  |||||||||||||||||||| |||  | || ||||||||||||| |    
T  42267303 ggcttttatatgtgtttattccctgcaaataggggtcatttaaaaattggtccctgtattctttaatcctgacaatttgtcctgccaaaatttaatcatt 42267402  T
Q  344 taaaatttcgtccctctctccacttaatca 373  Q
    ||| |||||||| ||||| |||||||||||    
T  42267403 taatatttcgtctctctccccacttaatca 42267432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 269 - 373
Target Start/End: Complemental strand, 22103909 - 22103805
Alignment:
Q  269 taaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccactt 368  Q
    ||||||| ||||||||||||| |||||  |||||| ||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  22103909 taaataggggtcatttaaaaaatggtccatgtattttttaatcctgctattttgccctgtcaaaatttaatcacttaaaatttcgtccctctctccactt 22103810  T
Q  369 aatca 373  Q
    |||||    
T  22103809 aatca 22103805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 252 - 373
Target Start/End: Original strand, 13245858 - 13245979
Alignment:
Q  252 tatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaattt 351  Q
    ||||| ||||||||||  ||||||   ||||||||||||||||| |||||||| ||||||||| |||||| || || |||||||||||||||||||||||    
T  13245858 tatgtatttagtccctgcaaataggattcatttaaaaattggtccttgtattccttaatcctggcattttaccctgccaaaatttaatcacttaaaattt 13245957  T
Q  352 cgtccctctctccacttaatca 373  Q
     ||||||||| |||||||||||    
T  13245958 tgtccctctccccacttaatca 13245979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 374
Target Start/End: Original strand, 9443572 - 9443702
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    |||||||||||||||||||||| |  |||||| ||||||||||||| |||||| ||||||| ||||||||| ||||||  | |  ||||||||||||| |    
T  9443572 ggcttttatatgtgtttagtccttgcaaataggggtcatttaaaaaatggtctctgtattccttaatcctggcattttgtcctcccaaaatttaatcatt 9443671  T
Q  344 taaaatttcgtccctctctccacttaatcat 374  Q
    |||||||| ||||||| | ||||||||||||    
T  9443672 taaaatttggtccctccccccacttaatcat 9443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 21444597 - 21444723
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    ||||||||||| ||||||||||   ||||||| | | ||||||||||||||| ||||||||||||||  || ||||||  | | ||||||||||||||||    
T  21444597 ggcttttatatatgtttagtcc---taaatagggattatttaaaaattggtccttgtattctttaattttggcattttatcctatcaaaatttaatcact 21444693  T
Q  344 taaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||| |||| |||||||||||    
T  21444694 taaaatttcgtccatctccccacttaatca 21444723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 373
Target Start/End: Complemental strand, 10304274 - 10304154
Alignment:
Q  253 atgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttc 352  Q
    |||||||||||||||  |||||| ||||||||||||| |||||  ||||||| ||||| ||| || ||| ||||  ||||||||||||| ||||||||||    
T  10304274 atgtgtttagtccctgcaaataggggtcatttaaaaaatggtcaatgtattcgttaattctggcaatttgccttcccaaaatttaatcatttaaaatttc 10304175  T
Q  353 gtccctctctccacttaatca 373  Q
    ||| ||||| |||||||||||    
T  10304174 gtctctctccccacttaatca 10304154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 373
Target Start/End: Original strand, 10303926 - 10304052
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    |||||||||||||| ||| ||  ||||||  |||||||||||| || ||| ||||||| ||||||||| || ||| || |  ||||||||||||| ||||    
T  10303926 ttttatatgtgtttggtctctgcaaataggagtcatttaaaaaatgatctatgtattcgttaatcctggcaatttgcccttccaaaatttaatcatttaa 10304025  T
Q  347 aatttcgtccctctctccacttaatca 373  Q
    ||||||||||||||| |||||||||||    
T  10304026 aatttcgtccctctccccacttaatca 10304052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 348
Target Start/End: Complemental strand, 19227285 - 19227183
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactta 345  Q
    ||||||||||||||||||| ||  |||||  ||||||||||||| | ||| |||||||| |||||||||||||||| || || |||||||||||||||||    
T  19227285 cttttatatgtgtttagtctctacaaataagggtcatttaaaaaatagtccttgtattccttaatcctgacattttgccctgccaaaatttaatcactta 19227186  T
Q  346 aaa 348  Q
    |||    
T  19227185 aaa 19227183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 238 - 359
Target Start/End: Complemental strand, 42267638 - 42267513
Alignment:
Q  238 tattaaggcttttatatgtgt----ttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaa 333  Q
    |||||||||||| ||||||||    |||||||||  ||||| |||||||||||||| |||||| ||||||| ||||||||| |||||| || |  |||||    
T  42267638 tattaaggctttcatatgtgtgtctttagtccctgcaaataaaggtcatttaaaaaatggtctctgtattccttaatcctggcattttgccctaccaaaa 42267539  T
Q  334 tttaatcacttaaaatttcgtccctc 359  Q
    ||||||||||| ||| || |||||||    
T  42267538 tttaatcacttcaaaattggtccctc 42267513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 359
Target Start/End: Original strand, 22103606 - 22103724
Alignment:
Q  240 ttaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaat 339  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||||||||| |||||  |||||| ||||||| || |||||| || |  ||||||| |||    
T  22103606 ttaaggcttttatacgtgtttagtcccg-taaataggggtcatttaaaaaatggtccatgtattttttaatcttggcattttgcccttccaaaattgaat 22103704  T
Q  340 cacttaaaatttcgtccctc 359  Q
    ||||||||| || |||||||    
T  22103705 cacttaaaaattggtccctc 22103724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 32927266 - 32927372
Alignment:
Q  252 tatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaattt 351  Q
    ||||||||||| |||| ||||||  ||||||||||||||| ||| ||| |||  ||||||||||||||||  |    ||||||||||||| |||||||||    
T  32927266 tatgtgtttagaccctgtaaatatgggtcatttaaaaattagtccttgaatttattaatcctgacattttgtcgctacaaaatttaatcagttaaaattt 32927365  T
Q  352 cgtccct 358  Q
     ||||||    
T  32927366 ggtccct 32927372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 16970877 - 16970833
Alignment:
Q  330 aaaatttaatcacttaaaatttcgtccctctctccacttaatcat 374  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||    
T  16970877 aaaatttaatcatttaaaatttcgtccctctccccacttaatcat 16970833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 43758912 - 43758951
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  43758912 tttaatcatttaaaatttcgtccctctctccacttaatca 43758951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 183530 - 183490
Alignment:
Q  333 atttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  183530 atttaatcatttaaaatttcgtccctctccccacttaatca 183490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 19227047 - 19227079
Alignment:
Q  329 caaaatttaatcacttaaaatttcgtccctctc 361  Q
    |||||||||||||||||||||||||||||||||    
T  19227047 caaaatttaatcacttaaaatttcgtccctctc 19227079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 373
Target Start/End: Original strand, 25647973 - 25648013
Alignment:
Q  333 atttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  25647973 atttaatcatttaaaatttcgtccctctccccacttaatca 25648013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 358
Target Start/End: Original strand, 32132302 - 32132418
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca 341  Q
    |||||||| |||||||||| ||||||| || ||| ||||||||||||||| |||  |||| || ||||||||  ||  || |  |  |||| ||||||||    
T  32132302 aaggctttaatatgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatca 32132401  T
Q  342 cttaaaatttcgtccct 358  Q
     ||||||||||||||||    
T  32132402 attaaaatttcgtccct 32132418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 34849096 - 34849140
Alignment:
Q  329 caaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||    
T  34849096 caaaatttaatcatttaaaatttcgtccctctcccctcttaatca 34849140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 34850408 - 34850364
Alignment:
Q  329 caaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||    
T  34850408 caaaatttaatcatttaaaatttcatccctctccccacttaatca 34850364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 42248506 - 42248602
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| |||||||||||||||||||| ||  ||||| || || ||| || |  ||   |||||||| ||||||||||||||||||| |||||||||||    
T  42248506 ggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 42248602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 1103551 - 1103590
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  1103551 tttaatcatttaaaatttcgtccctctccccacttaatca 1103590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 6367652 - 6367691
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  6367652 tttaatcatttaaaatttcgtccctctccccacttaatca 6367691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 14879061 - 14879100
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  14879061 tttaatcatttaaaatttcgtccctctccccacttaatca 14879100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 24009879 - 24009840
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  24009879 tttaatcatttaaaatttcgtccctctccccacttaatca 24009840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 330 - 373
Target Start/End: Complemental strand, 25065972 - 25065929
Alignment:
Q  330 aaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||    
T  25065972 aaaaattaatcatttaagatttcgtccctctctccacttaatca 25065929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 40210708 - 40210669
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  40210708 tttaatcatttaaaatttcgtccctctccccacttaatca 40210669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 40772597 - 40772636
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  40772597 tttaatcatttaaaatttcgtccctctccccacttaatca 40772636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 4566960 - 4567030
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgaca 317  Q
    |||||||||||||| ||||||  |||||   |||||||||||| |||||| | ||||| ||||||||||||    
T  4566960 ttttatatgtgtttcgtccctacaaatatgagtcatttaaaaaatggtctctttattcgttaatcctgaca 4567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 348
Target Start/End: Complemental strand, 21444844 - 21444802
Alignment:
Q  306 ttaatcctgacatttttccttgtcaaaatttaatcacttaaaa 348  Q
    ||||||||| |||||| || |||||||||||||||||||||||    
T  21444844 ttaatcctggcattttgccgtgtcaaaatttaatcacttaaaa 21444802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 24905473 - 24905435
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  24905473 ttaatcatttaaaatttcgtccctctccccacttaatca 24905435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 28011454 - 28011492
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  28011454 ttaatcatttaaaatttcgtccctctccccacttaatca 28011492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 31514623 - 31514585
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  31514623 ttaatcatttaaaatttcgtccctctccccacttaatca 31514585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 33442900 - 33442862
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  33442900 ttaatcatttaaaatttcgtccctctccccacttaatca 33442862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 373
Target Start/End: Complemental strand, 19018025 - 19017928
Alignment:
Q  276 aggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||| ||||||||||||||  |||||||  |||||||| || ||| || |  ||  ||||||||| ||||||||| ||||||||  |||||||||||    
T  19018025 aggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatcatttaaaattttgtccctcttcccacttaatca 19017928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 32928244 - 32928191
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtc 295  Q
    |||||||||||| ||||||||||| |  |||||| |||||||||| ||||||||    
T  32928244 aaggcttttatacgtgtttagtccgtgcaaataggggtcatttaagaattggtc 32928191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 13246140 - 13246060
Alignment:
Q  279 tcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctc 359  Q
    ||||||||||| |||||  ||||||| ||||||||  ||||||||| |  ||||||||||| || ||||| || |||||||    
T  13246140 tcatttaaaaaatggtccatgtattccttaatcctagcatttttccctaccaaaatttaatgacataaaaattggtccctc 13246060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 47999431 - 47999391
Alignment:
Q  333 atttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||| ||||||| ||||||||||| |||||||||||    
T  47999431 atttaatcatttaaaatatcgtccctctccccacttaatca 47999391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 12904754 - 12904883
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||| |||||  ||||||| |||||||||||| |||  | |  ||||||||||| | |    
T  12904754 ggcttttatatctgtttagtccctctaaatagggatcatttaaaaaatggtccctgtattcgttaatcctgacaatttgtcctcccaaaatttaataatt 12904853  T
Q  344 taaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||||||||| |||||||||||    
T  12904854 taaaatttcgtccctctccccacttaatca 12904883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 373
Target Start/End: Complemental strand, 14849135 - 14849006
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||| |||||  ||||||| |||||| || |||||| || |  ||||||||||||| |    
T  14849135 ggcttttatatgtgtttagtccttctaaatagggatcatttaaaaaatggtccatgtattccttaatcgtggcattttgccctaccaaaatttaatcatt 14849036  T
Q  344 taaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||| | |||||||||||    
T  14849035 taaaatttggtccctcaccccacttaatca 14849006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 245 - 374
Target Start/End: Original strand, 15644725 - 15644854
Alignment:
Q  245 gcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactt 344  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| || ||   |||||| ||||||||||||||||| | |  ||||||||||||| |     
T  15644725 gcttttatatgtgtttagtccctgtaaatagaggtcatttaaaaaatgatccccgtattccttaatcctgacattttttcctcccaaaatttaatcattc 15644824  T
Q  345 aaaatttcgtccctctctccacttaatcat 374  Q
    ||||||| | ||||| | ||||||||||||    
T  15644825 aaaatttggcccctccccccacttaatcat 15644854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 373
Target Start/End: Original strand, 14848737 - 14848868
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca 341  Q
    ||||||||||||||||||||||||||  |||||| | ||||||||||| |||| | || |||| ||||||||  ||||||||| |  |||||||||||||    
T  14848737 aaggcttttatatgtgtttagtccctgcaaatagggatcatttaaaaaatggtttgtgcattccttaatccttgcatttttccctcccaaaatttaatca 14848836  T
Q  342 cttaaaatttcgtccctctctccacttaatca 373  Q
     ||||||||| ||||||| | |||||||||||    
T  14848837 tttaaaatttggtccctccccccacttaatca 14848868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 358
Target Start/End: Complemental strand, 15645141 - 15645026
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcac 342  Q
    ||||||||||||||||||||| |||  ||||   |||||||||||||||||| | ||||||| |||||||||||||||| || |  |||||||||||||     
T  15645141 aggcttttatatgtgtttagttcctgcaaatgtgggtcatttaaaaattggtttatgtattcgttaatcctgacattttgccctcccaaaatttaatcat 15645042  T
Q  343 ttaaaatttcgtccct 358  Q
    ||||||||||||||||    
T  15645041 ttaaaatttcgtccct 15645026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 372
Target Start/End: Original strand, 5326050 - 5326185
Alignment:
Q  237 atattaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaattt 336  Q
    ||||| ||||||||||||||||||| |||||  |||||| ||||||||||||| |||||  || |||| ||||||||| |||||| || | |||||||||    
T  5326050 atatttaggcttttatatgtgtttaatccctgcaaataggggtcatttaaaaaatggtccctgcattccttaatcctggcattttgccctttcaaaattt 5326149  T
Q  337 aatcacttaaaatttcgtccctctctccacttaatc 372  Q
    ||||  ||||||||| || ||||   ||||||||||    
T  5326150 aatcttttaaaatttggttcctccacccacttaatc 5326185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 4700540 - 4700433
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    ||||||||||||||||| |||| | ||||||| ||||||||||||| || |  |||||||| |||||  ||||| |||||| |  |||||||| |||| |    
T  4700540 ggcttttatatgtgtttcgtccttataaataggggtcatttaaaaaatgattcttgtattcattaattatgacaattttcccttccaaaattttatcatt 4700441  T
Q  344 taaaattt 351  Q
    ||||||||    
T  4700440 taaaattt 4700433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 38475394 - 38475298
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| ||||||||||||||  |||| || |||||||||||| ||| || |  ||   |||||||| ||||||||||||||||||| |||||||||||    
T  38475394 ggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 38475298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 373
Target Start/End: Complemental strand, 5326447 - 5326318
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    |||||||| | ||||||||||| | ||||||| ||||||||||||| |||||  || |||| |||||| || ||||||  | |  ||||||||||| | |    
T  5326447 ggcttttacacgtgtttagtccttataaataggggtcatttaaaaaatggtccatgcattccttaatcatggcattttgtcctcccaaaatttaataatt 5326348  T
Q  344 taaaatttcgtccctctctccacttaatca 373  Q
    |||||||  ||| ||| | |||||||||||    
T  5326347 taaaattcggtcgctccccccacttaatca 5326318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 358
Target Start/End: Original strand, 24141450 - 24141566
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgac-atttttccttgtcaaaatttaatc 340  Q
    |||||||| |||||||||| ||||||  || |||| ||||||||||||||||||  |||| || ||||||||| | | ||  ||||| |||| |||||||    
T  24141450 aaggctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttg-caaagtttaatc 24141548  T
Q  341 acttaaaatttcgtccct 358  Q
    | |||||||||| |||||    
T  24141549 atttaaaatttcatccct 24141566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 373
Target Start/End: Original strand, 38442105 - 38442197
Alignment:
Q  281 atttaaaaattggtctttgtattctttaatcctgacatttttc-cttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||||||||| ||||| ||  ||||||||||| ||| | |||| ||   |||||||| ||||||||||||||||||| |||||||||||    
T  38442105 atttaaaaattggtcattgtaatcgctaatcctgacaatttactcttg-cattgtttaatcatttaaaatttcgtccctctccccacttaatca 38442197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 6150544 - 6150584
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatcat 374  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  6150544 tttaatcatttaaaatttcgtccctctccccacttaatcat 6150584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 39453333 - 39453429
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| ||||||||||||||| |||| ||  |||||||| || ||| || |  ||   |||||||| ||||||||||||||||||| |||||||||||    
T  39453333 ggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 39453429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 3529180 - 3529141
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  3529180 tttaatcatttaaaatttcgtccctctccccacttaatca 3529141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 5993979 - 5994018
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  5993979 tttaatcatttaaaatttcgtccctctccccacttaatca 5994018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 8322494 - 8322533
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  8322494 tttaatcatttaaaatttcgtccctctccccacttaatca 8322533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 14194761 - 14194722
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  14194761 tttaatcatttaaaatttcgtccctctccccacttaatca 14194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 28269726 - 28269687
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  28269726 tttaatcatttaaaatttcgtccctctccccacttaatca 28269687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 28771176 - 28771137
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  28771176 tttaatcatttaaaatttcgtccctctccccacttaatca 28771137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 29646700 - 29646661
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  29646700 tttaatcatttaaaatttcgtccctctccccacttaatca 29646661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 32242332 - 32242371
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  32242332 tttaatcatttaaaatttcgtccctctccccacttaatca 32242371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 35512238 - 35512277
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  35512238 tttaatcatttaaaatttcgtccctctccccacttaatca 35512277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 35920522 - 35920483
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  35920522 tttaatcatttaaaatttcgtccctctccccacttaatca 35920483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 40148896 - 40148967
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcct 313  Q
    |||||||| |||||||||| ||||||  || ||||| |||||||||||||||||  |||| || ||||||||    
T  40148896 aaggctttaatatgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcct 40148967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 297320 - 297282
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  297320 ttaatcatttaaaatttcgtccctctccccacttaatca 297282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 6758171 - 6758133
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  6758171 ttaatcatttaaaatttcgtccctctccccacttaatca 6758133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 31482708 - 31482670
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  31482708 ttaatcatttaaaatttcgtccctctccccacttaatca 31482670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 41930607 - 41930645
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  41930607 ttaatcatttaaaatttcgtccctctccccacttaatca 41930645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 11761839 - 11761879
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatcat 374  Q
    |||||||| |||||||||||||| |||| ||||||||||||    
T  11761839 tttaatcatttaaaatttcgtccatctccccacttaatcat 11761879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 373
Target Start/End: Original strand, 18247173 - 18247213
Alignment:
Q  333 atttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||| ||| ||||||||||||||| |||||||||||    
T  18247173 atttaatcatttagaatttcgtccctctccccacttaatca 18247213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 18670289 - 18670329
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatcat 374  Q
    |||||||| |||||||||||||| |||| ||||||||||||    
T  18670289 tttaatcatttaaaatttcgtccatctccccacttaatcat 18670329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 24547463 - 24547427
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaa 370  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  24547463 tttaatcatttaaaatttcgtccctctccccacttaa 24547427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 246 - 373
Target Start/End: Complemental strand, 22890420 - 22890293
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactta 345  Q
    ||||||||||||||||||||||  |||||| ||||||||||||  ||||   ||||||| |||||| |||||||||||| || |||||| ||||||||||    
T  22890420 cttttatatgtgtttagtccctgcaaataggggtcatttaaaacatggtacctgtattccttaatcttgacatttttccctggcaaaatctaatcactta 22890321  T
Q  346 aaatttcgtccctctctccacttaatca 373  Q
    |||||| ||||||||  |||||||||||    
T  22890320 aaattttgtccctcttcccacttaatca 22890293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 20050091 - 20050200
Alignment:
Q  252 tatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaattt 351  Q
    |||||||||||||||   |||||| |||||||||||||||||||  ||||||| ||||| ||| |||||| || || |||||||||||||||||||||||    
T  20050091 tatgtgtttagtcccaggaaataggggtcatttaaaaattggtccatgtattccttaattctggcattttgccctgccaaaatttaatcacttaaaattt 20050190  T
Q  352 cgtccctctc 361  Q
    ||||||||||    
T  20050191 cgtccctctc 20050200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 373
Target Start/End: Original strand, 24085780 - 24085903
Alignment:
Q  251 atatgtgtttagtccctctaaatagagg-tcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaat 349  Q
    |||||||||||||||||  ||||||||| |||| |||||| ||||| |||||||  ||||||||||||||||  | || |||||||||||| ||||||||    
T  24085780 atatgtgtttagtccctgcaaatagagggtcatataaaaaatggtccttgtatttcttaatcctgacattttgtcctgccaaaatttaatcgcttaaaat 24085879  T
Q  350 ttcgtccctctctccacttaatca 373  Q
    || ||||||||| |||||||||||    
T  24085880 tttgtccctctccccacttaatca 24085903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 359
Target Start/End: Original strand, 22890101 - 22890212
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| ||||| |||||||| |||||| |||||||||  |  ||||||||||||||||||||    
T  22890101 ttttatatgtgtttagtcccggtaaataggggtcatttaaaaaatggtc-ttgtattccttaatcatgacattttgtcccgtcaaaatttaatcacttaa 22890199  T
Q  347 aatttcgtccctc 359  Q
    || || |||||||    
T  22890200 aaattggtccctc 22890212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 373
Target Start/End: Complemental strand, 11291313 - 11291210
Alignment:
Q  269 taaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccactt 368  Q
    ||||||| ||||||||||||| |||||| ||||||||||||| ||| |||||| |||| |||||||||||||||||||||||| ||  |||||  |||||    
T  11291313 taaataggggtcatttaaaaaatggtctatgtattctttaat-ctggcattttgccttatcaaaatttaatcacttaaaattttgtatctctcctcactt 11291215  T
Q  369 aatca 373  Q
    |||||    
T  11291214 aatca 11291210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 348
Target Start/End: Original strand, 11291026 - 11291131
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcac 342  Q
    ||||||||||| ||||||||| |||  ||||||  |||||||||||| ||||  |||||||| |||||||||| ||||| || || ||||||||||||||    
T  11291026 aggcttttatacgtgtttagttcctacaaataggagtcatttaaaaaatggttcttgtattccttaatcctgatattttgccatgccaaaatttaatcac 11291125  T
Q  343 ttaaaa 348  Q
    ||||||    
T  11291126 ttaaaa 11291131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 357
Target Start/End: Complemental strand, 13084919 - 13084802
Alignment:
Q  240 ttaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaat 339  Q
    ||||||||||||||||||||||||| ||  |||||   ||||||||||||||||||  ||||||| |||||| ||  ||||| || || |||||||||||    
T  13084919 ttaaggcttttatatgtgtttagtctctgcaaatatgagtcatttaaaaattggtccatgtattccttaatcttggaattttgccctgccaaaatttaat 13084820  T
Q  340 cacttaaaatttcgtccc 357  Q
    ||||||||| || |||||    
T  13084819 cacttaaaaattggtccc 13084802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 373
Target Start/End: Complemental strand, 31873326 - 31873198
Alignment:
Q  245 gcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactt 344  Q
    |||||||||||||||||||||||  |||||  ||||||||||||| ||||| || ||||| |||||| || || ||| || |  ||||||||||||| ||    
T  31873326 gcttttatatgtgtttagtccctgcaaatatgggtcatttaaaaaatggtccttttattcgttaatcttggcaatttgccctcccaaaatttaatcattt 31873227  T
Q  345 aaaatttcgtccctctctccacttaatca 373  Q
    ||||||| || |||||  |||||||||||    
T  31873226 aaaattttgttcctcttcccacttaatca 31873198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 373
Target Start/End: Complemental strand, 9500030 - 9499897
Alignment:
Q  239 attaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaa 338  Q
    ||||| |||||| |||||||||||||| |  |||||| ||||  ||||||| ||||   ||||||  |||||||||||||||| || |  ||||||||||    
T  9500030 attaaagcttttgtatgtgtttagtccttacaaataggggtcgattaaaaaatggttcatgtatttcttaatcctgacattttaccctcccaaaatttaa 9499931  T
Q  339 tcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||| |||||||||  |||||| | |||||||||||    
T  9499930 tcatttaaaatttgatccctc-ccccacttaatca 9499897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 36928509 - 36928605
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| ||||||||||||||| |||| ||  ||||||||||| ||| || |  ||   |||||||| ||||||||||||||||||| |||||||||||    
T  36928509 ggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 36928605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 2535978 - 2535864
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    |||||| |||||| ||| ||||||  || ||| |||||||||||||||||||  |||| || ||||||||| ||  || || |  |||| |||||||| |    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatt 2535879  T
Q  344 taaaatttcgtccct 358  Q
    |||||||||||||||    
T  2535878 taaaatttcgtccct 2535864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 10794178 - 10794279
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    |||||||||||||| | |||| ||||||| | ||||||||||| || || || ||||| |||||  |||||||||  | || |||| |||||||||||||    
T  10794178 ttttatatgtgtttcgaccctataaatagggatcatttaaaaaatgatcattatattccttaattatgacattttatcctgccaaagtttaatcacttaa 10794277  T
Q  347 aa 348  Q
    ||    
T  10794278 aa 10794279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 22943947 - 22944036
Alignment:
Q  284 taaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||| |||  ||  |||||| || |||||| || || |||||||||||||| | |||||||||||| ||| |||||||||||    
T  22943947 taaaaattggtccttgggtttcttaatcttggcattttgccctgccaaaatttaatcacctgaaatttcgtccccctccccacttaatca 22944036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 373
Target Start/End: Complemental strand, 23663909 - 23663813
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| ||||||||||||||| |||| ||  |||||||| || ||| || |  ||   |||||||| ||||||||||||||||||| |||||||||||    
T  23663909 ggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 23663813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 39071709 - 39071805
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||| ||||||||||||||  |||| ||  ||||||||||| ||| || |  ||   |||||||| ||||||||||||||||||| |||||||||||    
T  39071709 ggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 39071805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 1425360 - 1425321
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  1425360 tttaatcatttaaaatttcgtccctctccccacttaatca 1425321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 2693686 - 2693741
Alignment:
Q  240 ttaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtc 295  Q
    ||||||||||||||||||||||||||||  |||||  |||| |||||||| |||||    
T  2693686 ttaaggcttttatatgtgtttagtccctgcaaatatgggtcgtttaaaaaatggtc 2693741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 16388864 - 16388825
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  16388864 tttaatcatttaaaatttcgtccctctccccacttaatca 16388825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 23698582 - 23698543
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  23698582 tttaatcatttaaaatttcgtccctctccccacttaatca 23698543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 35756672 - 35756711
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  35756672 tttaatcatttaaaatttcgtccctctccccacttaatca 35756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 38862708 - 38862747
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  38862708 tttaatcatttaaaatttcgtccctctccccacttaatca 38862747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 3041762 - 3041724
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  3041762 ttaatcatttaaaatttcgtccctctccccacttaatca 3041724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 36325325 - 36325363
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  36325325 ttaatcatttaaaatttcgtccctctccccacttaatca 36325363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 38845605 - 38845567
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  38845605 ttaatcatttaaaatttcgtccctctccccacttaatca 38845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 40775956 - 40775918
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  40775956 ttaatcatttaaaatttcgtccctctccccacttaatca 40775918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 44407163 - 44407125
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  44407163 ttaatcatttaaaatttcgtccctctccccacttaatca 44407125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 31608849 - 31608812
Alignment:
Q  336 taatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatca 31608812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 247 - 371
Target Start/End: Complemental strand, 33648889 - 33648766
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||||||||||||||||  | ||||||||||| |||||||||||||||| | |||  ||||| | |||||||||| | |||||||||||||||||||||    
T  33648889 ttttatatgtgtttagtctttgtaaatagaggttatttaaaaattggtctctatatcttttaaacatgacattttttc-tgtcaaaatttaatcacttaa 33648791  T
Q  347 aatttcgtccctctctccacttaat 371  Q
    |||||| ||||||||  ||||||||    
T  33648790 aatttcttccctctcctcacttaat 33648766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 1215015 - 1215111
Alignment:
Q  252 tatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaa 348  Q
    ||||||||||||||||  |||||| | ||||||||||  |||||| ||||||  |||||||||||||||| || |||||||||||||||||||||||    
T  1215015 tatgtgtttagtccctgcaaatagggctcatttaaaacatggtctctgtattgcttaatcctgacattttgccctgtcaaaatttaatcacttaaaa 1215111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 249 - 373
Target Start/End: Complemental strand, 1215289 - 1215165
Alignment:
Q  249 ttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaa 348  Q
    ||||||||||||| |||||  |||||| | ||||||||||| || |   ||||||| |||| |||  |||||| || |||||||||||||||||||||||    
T  1215289 ttatatgtgtttactccctgcaaatagggctcatttaaaaaatgattcatgtattccttaagcctaccattttgccctgtcaaaatttaatcacttaaaa 1215190  T
Q  349 tttcgtccctctctccacttaatca 373  Q
    |||||||||| || |||||||||||    
T  1215189 tttcgtccctatccccacttaatca 1215165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 359
Target Start/End: Original strand, 13378527 - 13378640
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactta 345  Q
    |||| |||||| |||| |||||  |||||| ||||||||||||| ||||| |||||||  ||||||||| || ||| || |   ||||||||||||||||    
T  13378527 ctttaatatgtatttactccctgcaaataggggtcatttaaaaaatggtccttgtatttgttaatcctggcaatttgccctcctaaaatttaatcactta 13378626  T
Q  346 aaatttcgtccctc 359  Q
    ||| || |||||||    
T  13378627 aaaattggtccctc 13378640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 348
Target Start/End: Original strand, 33648567 - 33648672
Alignment:
Q  242 aaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca 341  Q
    ||||||||||||||||||||||   | |||||| || ||||||||||| |||||  |||||| ||||||| ||  |||||  | ||| ||||||||||||    
T  33648567 aaggcttttatatgtgtttagttgatgtaaata-agatcatttaaaaaatggtcaatgtattttttaatcatggtattttgtcatgtgaaaatttaatca 33648665  T
Q  342 cttaaaa 348  Q
    |||||||    
T  33648666 cttaaaa 33648672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 12080726 - 12080765
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  12080726 tttaatcatttaaaatttcgtccctctccccacttaatca 12080765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 30803951 - 30803990
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  30803951 tttaatcatttaaaatttcgtccctctccccacttaatca 30803990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 33517624 - 33517663
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  33517624 tttaatcatttaaaatttcgtccctctccccacttaatca 33517663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 359
Target Start/End: Original strand, 26463212 - 26463294
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctc 359  Q
    |||| ||||||||||||||  ||||||| ||||||||| ||  || || |  |||| |||||||| |||||||||||||||||    
T  26463212 ggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctc 26463294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 28000691 - 28000653
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  28000691 ttaatcatttaaaatttcgtccctctccccacttaatca 28000653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 30337540 - 30337578
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  30337540 ttaatcatttaaaatttcgtccctctccccacttaatca 30337578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 22054077 - 22054125
Alignment:
Q  240 ttaaggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaa 289  Q
    ||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  22054077 ttaaggcttttatatgtgtttagtccctgcaaatag-gttcatttaaaaa 22054125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 350
Target Start/End: Original strand, 11308 - 11410
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||| || ||| |||| ||||||||| |||||| |  |||||||||||||||| ||||    
T  11308 ttttatatgtgtttagtccttataaatagaggttatttaaaaattgatcattgaattcgttaatcctg-cattttacactgtcaaaatttaatcatttaa 11406  T
Q  347 aatt 350  Q
    ||||    
T  11407 aatt 11410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 359
Target Start/End: Complemental strand, 9530 - 9416
Alignment:
Q  245 gcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactt 344  Q
    |||||||||||||||||||||||| ||| || | ||||||||||| |||||  | ||||| |||||||||  |||||  | |||||||||||||||||||    
T  9530 gcttttatatgtgtttagtccctccaaacagggatcatttaaaaaatggtccctatattccttaatcctggtattttgtcctgtcaaaatttaatcactt 9431  T
Q  345 aaaatttcgtccctc 359  Q
    |||| || |||||||    
T  9430 aaaaattggtccctc 9416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 373
Target Start/End: Original strand, 9207 - 9335
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcact 343  Q
    ||||||||||||| ||||||| ||  ||||||| || |||||||||||| ||  ||||||  |||||||   |||||| || ||   |||||||||||||    
T  9207 ggcttttatatgtatttagtctctgcaaatagatgttatttaaaaattgatccctgtatttcttaatccatgcattttgccctgcagaaatttaatcact 9306  T
Q  344 taaaatttcgtccctctctccacttaatca 373  Q
    ||||||| |||||| ||| |||||||||||    
T  9307 taaaattccgtccc-ctccccacttaatca 9335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 31301 - 31217
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctc 361  Q
    |||||||||||||||||||  ||||||| |||||  | | ||||| || | ||||||||||||||||||||||||||||||||||    
T  31301 ggtcatttaaaaattggtccatgtattccttaattataatattttgccctatcaaaatttaatcacttaaaatttcgtccctctc 31217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 31023 - 31124
Alignment:
Q  247 ttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaa 346  Q
    ||||||||||||||| |||||  |||||   |||||||||||| ||||   ||||||| ||||| ||| || |||  | |||||||||||||||||||||    
T  31023 ttttatatgtgtttaatccctgcaaatatgagtcatttaaaaaatggttcatgtattccttaattctggcaatttgtcctgtcaaaatttaatcacttaa 31122  T
Q  347 aa 348  Q
    ||    
T  31123 aa 31124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 360
Target Start/End: Complemental strand, 15876 - 15761
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcattta-aaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatca- 341  Q
    |||||||||||||  |||||||||  |||||| ||||||||| ||||||| || | |||||||||||||| | ||||||||| || |||||||||||||     
T  15876 ggcttttatatgt--ttagtccctgcaaataggggtcatttagaaaattgttcct-gtattctttaatccaggcatttttccctgccaaaatttaatcat 15780  T
Q  342 cttaaaatttcgtccctct 360  Q
     ||||||||||||||||||    
T  15779 tttaaaatttcgtccctct 15761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 373
Target Start/End: Complemental strand, 8285 - 8156
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcac 342  Q
    |||||||||||||| |||||||| |  ||| ||| || |||||||||||| ||  ||||||||| ||| ||| |||||| || |||||||||||||||||    
T  8285 aggcttttatatgtatttagtccttgcaaacagatgttatttaaaaattgatccctgtattcttcaattctggcattttacc-tgtcaaaatttaatcac 8187  T
Q  343 ttaaaatttcgtccctctctccacttaatca 373  Q
    |||||| || ||| |||  | ||||||||||    
T  8186 ttaaaaattggtctctcggttcacttaatca 8156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 348
Target Start/End: Original strand, 31627 - 31728
Alignment:
Q  246 cttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcactta 345  Q
    |||| |||||||||||||||||  ||||||| |||||||||| | |||||  ||||||| |||||||| ||| ||| || |  |||||||||||||||||    
T  31627 ctttaatatgtgtttagtccctacaaatagaagtcatttaaacaatggtc-atgtattcgttaatccttacaatttgccctcccaaaatttaatcactta 31725  T
Q  346 aaa 348  Q
    |||    
T  31726 aaa 31728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 37953 - 37862
Alignment:
Q  282 tttaaaaattggtctttgtattctttaatcctgacatttttcc-ttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||||||||||| ||  ||||||||||| ||| || |||| |   |||||||| ||||||||||||||||||| |||||||||||    
T  37953 tttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgt-attgtttaatcatttaaaatttcgtccctctccccacttaatca 37862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 6499 - 6576
Alignment:
Q  244 ggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctgacatttt 321  Q
    |||||||||||||| ||||||||   |||||| ||||||||||||| |||||  ||||||  ||||||||| ||||||    
T  6499 ggcttttatatgtgattagtcccagcaaataggggtcatttaaaaaatggtccatgtatttcttaatcctggcatttt 6576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 68998 - 69094
Alignment:
Q  277 ggtcatttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||||||||||||||  |||| ||  |||||||| || ||| || |  ||   |||||||| ||||||||||||||||||| |||||||||||    
T  68998 ggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatca 69094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 374
Target Start/End: Complemental strand, 14180 - 14089
Alignment:
Q  282 tttaaaaattggtctttgtattctttaatcctgacatttttccttgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatcat 374  Q
    |||||||| | |||| | ||||| |||||||||| ||||| || |  ||||||||||||| ||||||||| ||||||| | ||||||||||||    
T  14180 tttaaaaaatagtctctctattccttaatcctgatattttgccctcccaaaatttaatcatttaaaatttggtccctc-ccccacttaatcat 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 23230 - 23301
Alignment:
Q  243 aggcttttatatgtgtttagtccctctaaatagaggtcatttaaaaattggtctttgtattctttaatcctg 314  Q
    ||||||| |||||||||| ||||||  |||||   ||||||||||||||||||| ||||||  |||||||||    
T  23230 aggctttgatatgtgtttcgtccctgcaaatatgagtcatttaaaaattggtctatgtatttgttaatcctg 23301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 1859 - 1898
Alignment:
Q  334 tttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  1859 tttaatcatttaaaatttcgtccctctccccacttaatca 1898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 1324 - 1362
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  1324 ttaatcatttaaaatttcgtccctctccccacttaatca 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 141900 - 141862
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  141900 ttaatcatttaaaatttcgtccctctccccacttaatca 141862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 139763 - 139801
Alignment:
Q  335 ttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  139763 ttaatcatttaaaatttcgtccctctccccacttaatca 139801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 373
Target Start/End: Original strand, 2232 - 2272
Alignment:
Q  333 atttaatcacttaaaatttcgtccctctctccacttaatca 373  Q
    ||||||||| ||||||||| ||||||||| |||||||||||    
T  2232 atttaatcatttaaaattttgtccctctccccacttaatca 2272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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