View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4685-Insertion-12 (Length: 153)
Name: NF4685-Insertion-12
Description: NF4685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4685-Insertion-12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 147; Significance: 7e-78; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 147; E-Value: 7e-78
Query Start/End: Original strand, 7 - 153
Target Start/End: Complemental strand, 39743366 - 39743220
Alignment:
| Q |
7 |
atgaactatatattaatgtaacttgatttatttataattaaacctgtggaatagcaaagattgcaaggacaagaccagccaagacatcacacttaaactt |
106 |
Q |
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| T |
39743366 |
atgaactatatattaatgtaacttgatttatttataattaaacctgtggaatagcaaagattgcaaggacaagaccagccaagacatcacacttaaactt |
39743267 |
T |
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| Q |
107 |
ttgaacattgtagtttttgaatgaattaaggattggaaaaacacact |
153 |
Q |
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| T |
39743266 |
ttgaacattgtagtttttgaatgaattaaggattggaaaaacacact |
39743220 |
T |
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