View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4685-Insertion-13 (Length: 139)
Name: NF4685-Insertion-13
Description: NF4685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4685-Insertion-13 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 132; Significance: 6e-69; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 132; E-Value: 6e-69
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 17067974 - 17067843
Alignment:
| Q |
8 |
tattgctggtacggtaattaacatattgctttcaattaaagcacatctcagcatttctcaataacttaataacatacacgttttatatattagcattttt |
107 |
Q |
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| T |
17067974 |
tattgctggtacggtaattaacatattgctttcaattaaagcacatctcagcatttctcaataacttaataacatacacgttttatatattagcattttt |
17067875 |
T |
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| Q |
108 |
gagttcaactgacttttggttgcagatcctga |
139 |
Q |
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| T |
17067874 |
gagttcaactgacttttggttgcagatcctga |
17067843 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 132; E-Value: 6e-69
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 17580383 - 17580514
Alignment:
| Q |
8 |
tattgctggtacggtaattaacatattgctttcaattaaagcacatctcagcatttctcaataacttaataacatacacgttttatatattagcattttt |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17580383 |
tattgctggtacggtaattaacatattgctttcaattaaagcacatctcagcatttctcaataacttaataacatacacgttttatatattagcattttt |
17580482 |
T |
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| Q |
108 |
gagttcaactgacttttggttgcagatcctga |
139 |
Q |
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| T |
17580483 |
gagttcaactgacttttggttgcagatcctga |
17580514 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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