View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4685-Insertion-8 (Length: 353)
Name: NF4685-Insertion-8
Description: NF4685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4685-Insertion-8 |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 101 - 345
Target Start/End: Original strand, 41234130 - 41234376
Alignment:
| Q |
101 |
cttataaaccttaatgaga----gtggccaattagagattttgtaggggattaaaaaattgaaatcgccactaatgtctcgtcatttcgtcaataaattt |
196 |
Q |
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| T |
41234130 |
cttataaaccttaatgagagagagtggccaattagagattttgtaggggattaaaaaattgaaatcgccactaatgtctcgtcatttcgtcaataaattt |
41234229 |
T |
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| Q |
197 |
agtgagaaaaactgagaagttactcaaaattttcatatatatttttcatctatatcttttgttgactgtatttcccaacnnnnnnnnnngattaatcaat |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
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| T |
41234230 |
agtgagaaaaactgagaagttactcaaaattttcatatatatttttcatctatatcttttgttgactgtatttcccaac--ttttttttgactaatcaat |
41234327 |
T |
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| Q |
297 |
agttctatctatttcctaacttcaatatatttccttaattgctaagaaa |
345 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
41234328 |
agttctatctatttcctaactttaatatatttccttaattgctaagaaa |
41234376 |
T |
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