View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4685-Insertion-9 (Length: 283)
Name: NF4685-Insertion-9
Description: NF4685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4685-Insertion-9 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 34676054 - 34676290
Alignment:
| Q |
8 |
atatcaacactactagtcttgtttgtgtattgatcaatgaaaatgcaaactctataggcatgtgcatttgagttgacattctctgtcattgtttatttat |
107 |
Q |
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| T |
34676054 |
atatcaacactactagtcttgtttgtgtattgatcaatgaaaatgcaaactctataggcatgtgcatttgagttgacattctctgtcattgtttatttat |
34676153 |
T |
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| Q |
108 |
tattatcaagaataaatgaatgaaatgaagcatatatatatcgtttaataattaatttcttgattctaaagcctaactctacgggttagtcttcctatat |
207 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
34676154 |
tattatcaaaaataaatgaatgaaatgaagcatatatatatcgtttaataattaatttcttgattctaaagcctaactctacgggttagtcttcccatat |
34676253 |
T |
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| Q |
208 |
atcttacttaccctagctatatatattccttatcttg |
244 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
34676254 |
atcttacttaccctagctatatatattccttatcttg |
34676290 |
T |
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