View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4685_low_28 (Length: 223)

Name: NF4685_low_28
Description: NF4685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4685_low_28
NF4685_low_28
[»] chr6 (1 HSPs)
chr6 (1-205)||(26275801-26276005)
[»] chr5 (2 HSPs)
chr5 (1-205)||(3358733-3358937)
chr5 (1-205)||(3341824-3342028)
[»] chr1 (5 HSPs)
chr1 (1-205)||(9087928-9088132)
chr1 (1-205)||(32517049-32517253)
chr1 (1-205)||(45881129-45881333)
chr1 (1-205)||(35813531-35813735)
chr1 (1-179)||(2315775-2315953)
[»] chr8 (2 HSPs)
chr8 (1-205)||(5157473-5157677)
chr8 (1-205)||(39773939-39774143)
[»] chr7 (1 HSPs)
chr7 (1-205)||(7331485-7331689)
[»] chr4 (2 HSPs)
chr4 (1-205)||(29379961-29380165)
chr4 (1-205)||(2519795-2519998)
[»] chr2 (4 HSPs)
chr2 (1-205)||(37644779-37644983)
chr2 (1-205)||(21647839-21648043)
chr2 (1-205)||(29982525-29982729)
chr2 (1-205)||(15322052-15322254)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-205)||(17683-17887)


Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 26275801 - 26276005
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26275801 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 26275900  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26275901 ctcagaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattaaccaatgaccatccatattgaacgg 26276000  T
Q  201 agtta 205  Q
    |||||    
T  26276001 agtta 26276005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 3358937 - 3358733
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3358937 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 3358838  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3358837 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 3358738  T
Q  201 agtta 205  Q
    |||||    
T  3358737 agtta 3358733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 3342028 - 3341824
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3342028 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccagatatacgtcgatggtttctgtcaagataagaga 3341929  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3341928 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 3341829  T
Q  201 agtta 205  Q
    |||||    
T  3341828 agtta 3341824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 9088132 - 9087928
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9088132 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 9088033  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9088032 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 9087933  T
Q  201 agtta 205  Q
    |||||    
T  9087932 agtta 9087928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 32517253 - 32517049
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32517253 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgccgatggtttctgtcaagataagaga 32517154  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32517153 ctcagaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 32517054  T
Q  201 agtta 205  Q
    |||||    
T  32517053 agtta 32517049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 45881129 - 45881333
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45881129 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgccgatggtttctgtcaagataagaga 45881228  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45881229 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 45881328  T
Q  201 agtta 205  Q
    |||||    
T  45881329 agtta 45881333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 35813735 - 35813531
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35813735 tgctagaatgattgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 35813636  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35813635 ctcggaagtgaaagaatctgcaacgactgaagcatcagtttcatggctctcattcttagtatcaataaaagattgaccaatgaccatccatattgaacgg 35813536  T
Q  201 agtta 205  Q
    |||||    
T  35813535 agtta 35813531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 2315775 - 2315953
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    |||||| |||||||||||||||||||| || |||||||||  ||||||||| |||||| ||||||||||||| |||||||| ||||||||||||| ||||    
T  2315775 tgctaggatggttgaattcctcagcatctgtagggcttaccctcctcttatcaggtgcatttgccggatataggtcgatggattctgtcaagataggaga 2315874  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgacca 179  Q
    ||| ||| |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2315875 ctccgaaatgaaagaatctgcaactactgaagcatcagtttcattgctctcattcctagtatcaataaaagattgacca 2315953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 5157677 - 5157473
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5157677 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgtcggatatacgtcgatggtttctgtcaagataagaga 5157578  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5157577 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 5157478  T
Q  201 agtta 205  Q
    |||||    
T  5157477 agtta 5157473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 39773939 - 39774143
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39773939 tgctagaatggttgaattcctcagcatttgcagggtttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 39774038  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39774039 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 39774138  T
Q  201 agtta 205  Q
    |||||    
T  39774139 agtta 39774143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 7331485 - 7331689
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7331485 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgccgatggtttctgtcaagataagaga 7331584  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7331585 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 7331684  T
Q  201 agtta 205  Q
    |||||    
T  7331685 agtta 7331689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 29380165 - 29379961
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29380165 tgctagaatggttgaattcctcagcatttgcagggcttacttttctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 29380066  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29380065 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 29379966  T
Q  201 agtta 205  Q
    |||||    
T  29379965 agtta 29379961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 2519998 - 2519795
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2519998 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 2519899  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2519898 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgacc-atgaccatccatattgaacgg 2519800  T
Q  201 agtta 205  Q
    |||||    
T  2519799 agtta 2519795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 37644779 - 37644983
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37644779 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgtcggatatacgtcgatggtttctgtcaagataagaga 37644878  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37644879 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 37644978  T
Q  201 agtta 205  Q
    |||||    
T  37644979 agtta 37644983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21648043 - 21647839
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  21648043 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgttttccggatatacgtcgatggtttttgtcaagataagaga 21647944  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21647943 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 21647844  T
Q  201 agtta 205  Q
    |||||    
T  21647843 agtta 21647839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 29982525 - 29982729
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29982525 tgctagaatggttgaattcctcagcatttgcaaggcttactttcctcttataaggtgcgtttgtcggatatacgtcgatggtttctgtcaagataagaga 29982624  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29982625 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 29982724  T
Q  201 agtta 205  Q
    |||||    
T  29982725 agtta 29982729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 15322254 - 15322052
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  15322254 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataag-tgcgttt-ccggatatacgtcgatggtttctgtcaagataagaga 15322157  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15322156 ctcagaagtgaaagaatctgcaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattggacgg 15322057  T
Q  201 agtta 205  Q
    |||||    
T  15322056 agtta 15322052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 17683 - 17887
Alignment:
Q  1 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgccggatatacgtcgatggtttctgtcaagataagaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  17683 tgctagaatggttgaattcctcagcatttgcagggcttactttcctcttataaggtgcgtttgttggatatacgtcgatggtttctgtcaagataagaga 17782  T
Q  101 ctcagaagtgaacgaatctacaactactgaagcatcagtttcatggctctcattcctagtatcaataaaagattgaccaatgaccatccatattgaacgg 200  Q
    ||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17783 ctcggaagtgaaagaatctgcaactactgaagcatcagtttcatcgctctcattcctagtatcaataaaagatcgaccaatgaccatccatattgaacgg 17882  T
Q  201 agtta 205  Q
    |||||    
T  17883 agtta 17887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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