View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4685_low_7 (Length: 351)

Name: NF4685_low_7
Description: NF4685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4685_low_7
NF4685_low_7
[»] chr3 (44 HSPs)
chr3 (21-184)||(19984846-19985010)
chr3 (22-184)||(19986010-19986175)
chr3 (13-184)||(22776752-22776924)
chr3 (23-184)||(54540730-54540892)
chr3 (22-183)||(7758400-7758563)
chr3 (24-184)||(49216247-49216408)
chr3 (22-184)||(12700173-12700335)
chr3 (22-184)||(7267642-7267804)
chr3 (20-184)||(29931222-29931388)
chr3 (13-181)||(29932641-29932810)
chr3 (20-184)||(29980376-29980542)
chr3 (13-181)||(29981795-29981964)
chr3 (51-173)||(55191946-55192068)
chr3 (55-152)||(46719973-46720070)
chr3 (22-152)||(534497-534628)
chr3 (41-184)||(6171183-6171324)
chr3 (27-161)||(54986970-54987103)
chr3 (51-152)||(31645001-31645102)
chr3 (51-152)||(34019117-34019218)
chr3 (25-184)||(8456479-8456639)
chr3 (21-184)||(7268767-7268930)
chr3 (55-184)||(23770346-23770476)
chr3 (23-152)||(46721192-46721322)
chr3 (24-184)||(47614185-47614347)
chr3 (19-152)||(51469967-51470101)
chr3 (23-184)||(54539754-54539916)
chr3 (18-99)||(12703525-12703606)
chr3 (51-152)||(23769885-23769985)
chr3 (18-184)||(47610519-47610687)
chr3 (48-179)||(6250522-6250652)
chr3 (22-152)||(11671313-11671443)
chr3 (21-184)||(51347265-51347430)
chr3 (24-100)||(51037536-51037612)
chr3 (22-152)||(8875904-8876035)
chr3 (22-152)||(47609695-47609826)
chr3 (107-184)||(47615516-47615594)
chr3 (16-80)||(27852998-27853063)
chr3 (23-183)||(52839036-52839197)
chr3 (37-125)||(24516474-24516562)
chr3 (27-150)||(52104484-52104604)
chr3 (22-75)||(47615597-47615651)
chr3 (18-99)||(51038815-51038897)
chr3 (22-99)||(5029708-5029785)
chr3 (18-75)||(28262187-28262244)
[»] chr1 (42 HSPs)
chr1 (23-167)||(45157166-45157310)
chr1 (48-184)||(39153056-39153192)
chr1 (48-184)||(39151956-39152092)
chr1 (22-150)||(51685739-51685868)
chr1 (48-167)||(45156074-45156193)
chr1 (51-184)||(45148609-45148741)
chr1 (19-184)||(14999280-14999442)
chr1 (23-184)||(11436041-11436204)
chr1 (41-152)||(43059978-43060089)
chr1 (22-184)||(45149910-45150073)
chr1 (23-184)||(44404441-44404603)
chr1 (24-184)||(39699707-39699867)
chr1 (22-152)||(11437171-11437302)
chr1 (34-152)||(43058796-43058914)
chr1 (58-184)||(44411906-44412032)
chr1 (24-152)||(51684366-51684495)
chr1 (24-152)||(39222445-39222575)
chr1 (21-152)||(50680329-50680460)
chr1 (41-178)||(24426020-24426158)
chr1 (22-184)||(24422798-24422962)
chr1 (21-152)||(35066974-35067106)
chr1 (23-150)||(36612852-36612979)
chr1 (19-184)||(36613843-36614010)
chr1 (23-184)||(52274967-52275130)
chr1 (22-184)||(35595131-35595296)
chr1 (79-152)||(30248168-30248240)
chr1 (51-152)||(30249462-30249563)
chr1 (23-99)||(33088642-33088719)
chr1 (23-184)||(35594216-35594377)
chr1 (21-99)||(7674525-7674602)
chr1 (22-99)||(23980491-23980569)
chr1 (23-152)||(52827346-52827476)
chr1 (129-178)||(14999901-14999950)
chr1 (51-152)||(40384753-40384854)
chr1 (24-96)||(50681632-50681705)
chr1 (24-152)||(41364829-41364957)
chr1 (22-180)||(52276106-52276266)
chr1 (21-152)||(7983047-7983178)
chr1 (22-152)||(52828042-52828173)
chr1 (51-184)||(43378652-43378786)
chr1 (79-140)||(31194109-31194170)
chr1 (23-69)||(39221357-39221405)
[»] chr5 (36 HSPs)
chr5 (48-184)||(24332938-24333074)
chr5 (23-184)||(19752911-19753073)
chr5 (22-184)||(28538674-28538837)
chr5 (27-152)||(2186774-2186899)
chr5 (22-184)||(25523067-25523231)
chr5 (27-184)||(28539760-28539917)
chr5 (21-184)||(40255612-40255776)
chr5 (37-184)||(36486428-36486575)
chr5 (81-184)||(16650050-16650154)
chr5 (22-184)||(18486841-18487005)
chr5 (22-152)||(16650827-16650958)
chr5 (18-152)||(42196172-42196307)
chr5 (23-145)||(21835040-21835162)
chr5 (24-184)||(20214196-20214357)
chr5 (24-183)||(22940563-22940723)
chr5 (21-184)||(33160227-33160390)
chr5 (19-184)||(25055407-25055574)
chr5 (55-152)||(42195164-42195261)
chr5 (18-184)||(1015478-1015645)
chr5 (37-152)||(19754102-19754217)
chr5 (55-180)||(36485332-36485457)
chr5 (22-184)||(5778775-5778939)
chr5 (24-100)||(21834943-21835019)
chr5 (64-152)||(25524070-25524158)
chr5 (51-113)||(33158126-33158188)
chr5 (51-97)||(34893693-34893739)
chr5 (55-184)||(1016804-1016932)
chr5 (24-115)||(25056390-25056482)
chr5 (18-75)||(18485132-18485190)
chr5 (22-99)||(20216788-20216866)
chr5 (23-184)||(1797237-1797398)
chr5 (21-99)||(25524152-25524232)
chr5 (51-99)||(1796082-1796130)
chr5 (52-152)||(5730834-5730934)
chr5 (22-98)||(5777899-5777974)
chr5 (51-115)||(7311618-7311682)
[»] chr2 (32 HSPs)
chr2 (23-184)||(802531-802692)
chr2 (23-184)||(22587894-22588055)
chr2 (48-184)||(810721-810857)
chr2 (12-184)||(38840433-38840606)
chr2 (22-152)||(18905960-18906090)
chr2 (18-184)||(36449772-36449939)
chr2 (51-184)||(22587529-22587661)
chr2 (25-152)||(13030293-13030418)
chr2 (51-184)||(41879152-41879285)
chr2 (23-180)||(11258754-11258913)
chr2 (18-152)||(18300697-18300829)
chr2 (22-184)||(7899822-7899985)
chr2 (22-181)||(36450864-36451023)
chr2 (55-152)||(11996739-11996836)
chr2 (24-152)||(18299373-18299502)
chr2 (23-184)||(22848190-22848353)
chr2 (15-184)||(7898682-7898852)
chr2 (51-152)||(24475252-24475353)
chr2 (51-184)||(38839270-38839403)
chr2 (21-184)||(18797243-18797409)
chr2 (22-148)||(23869511-23869637)
chr2 (35-99)||(13567983-13568048)
chr2 (37-152)||(18869134-18869251)
chr2 (51-99)||(32739651-32739699)
chr2 (24-163)||(41878092-41878234)
chr2 (22-99)||(18904365-18904443)
chr2 (51-152)||(26545493-26545594)
chr2 (64-184)||(32739693-32739812)
chr2 (22-152)||(11938761-11938891)
chr2 (22-99)||(18868922-18869000)
chr2 (51-152)||(28617950-28618050)
chr2 (23-75)||(21837304-21837355)
[»] chr4 (41 HSPs)
chr4 (22-184)||(1290137-1290301)
chr4 (24-184)||(31600925-31601086)
chr4 (48-184)||(10448200-10448336)
chr4 (24-184)||(10447006-10447168)
chr4 (27-184)||(12129626-12129785)
chr4 (22-184)||(26421562-26421724)
chr4 (27-172)||(8758789-8758935)
chr4 (55-152)||(37728537-37728634)
chr4 (37-184)||(31599803-31599950)
chr4 (26-152)||(19750547-19750673)
chr4 (26-152)||(19789133-19789259)
chr4 (21-99)||(49308052-49308130)
chr4 (22-184)||(5526065-5526228)
chr4 (24-152)||(1834119-1834249)
chr4 (22-184)||(1835041-1835205)
chr4 (22-184)||(25685761-25685925)
chr4 (22-172)||(8757673-8757822)
chr4 (51-152)||(1289125-1289226)
chr4 (18-99)||(17382987-17383068)
chr4 (24-162)||(50909634-50909774)
chr4 (22-100)||(1963194-1963273)
chr4 (20-99)||(17388236-17388315)
chr4 (22-184)||(21177995-21178157)
chr4 (22-152)||(49306773-49306902)
chr4 (24-152)||(25684934-25685063)
chr4 (27-184)||(35934347-35934503)
chr4 (55-115)||(27257969-27258029)
chr4 (121-184)||(54107957-54108020)
chr4 (23-152)||(10470545-10470675)
chr4 (24-184)||(10471327-10471489)
chr4 (22-152)||(13509331-13509461)
chr4 (51-184)||(52491549-52491680)
chr4 (27-100)||(55602379-55602452)
chr4 (27-152)||(8155741-8155866)
chr4 (22-98)||(13386012-13386090)
chr4 (55-152)||(37727729-37727825)
chr4 (23-152)||(5525359-5525488)
chr4 (23-75)||(14868889-14868941)
chr4 (23-75)||(14876993-14877045)
chr4 (55-127)||(21539068-21539140)
chr4 (48-140)||(50909297-50909388)
[»] chr8 (40 HSPs)
chr8 (33-170)||(18970920-18971057)
chr8 (22-173)||(24122881-24123032)
chr8 (18-184)||(12353301-12353466)
chr8 (19-152)||(5513977-5514110)
chr8 (24-152)||(30336473-30336602)
chr8 (36-184)||(30570196-30570343)
chr8 (41-152)||(1824050-1824161)
chr8 (41-152)||(1858495-1858606)
chr8 (22-152)||(8389661-8389792)
chr8 (24-184)||(10006344-10006506)
chr8 (33-183)||(18978029-18978179)
chr8 (24-184)||(22220388-22220550)
chr8 (55-152)||(30335671-30335768)
chr8 (22-183)||(30568885-30569046)
chr8 (55-178)||(18488208-18488331)
chr8 (22-152)||(2379896-2380023)
chr8 (20-184)||(10007702-10007868)
chr8 (23-152)||(8388463-8388591)
chr8 (55-184)||(11287808-11287937)
chr8 (51-152)||(24123870-24123971)
chr8 (23-147)||(32207302-32207425)
chr8 (22-184)||(17844276-17844435)
chr8 (55-152)||(1823584-1823682)
chr8 (55-152)||(1858029-1858127)
chr8 (25-170)||(18979074-18979220)
chr8 (23-152)||(22221336-22221466)
chr8 (23-152)||(22227678-22227808)
chr8 (55-152)||(11282040-11282137)
chr8 (12-184)||(45114457-45114629)
chr8 (66-152)||(24361166-24361251)
chr8 (27-97)||(29968364-29968434)
chr8 (82-152)||(40471119-40471189)
chr8 (51-184)||(12351949-12352082)
chr8 (23-152)||(24359808-24359936)
chr8 (52-161)||(29043427-29043536)
chr8 (51-152)||(43661795-43661896)
chr8 (24-75)||(24483143-24483195)
chr8 (55-184)||(43661297-43661427)
chr8 (22-99)||(5514295-5514372)
chr8 (22-81)||(11456636-11456696)
[»] chr7 (29 HSPs)
chr7 (22-184)||(7501791-7501955)
chr7 (24-152)||(18371424-18371553)
chr7 (37-152)||(18372429-18372544)
chr7 (21-151)||(21505413-21505542)
chr7 (22-184)||(42886226-42886389)
chr7 (51-184)||(22629514-22629648)
chr7 (22-152)||(22630424-22630555)
chr7 (18-99)||(11658373-11658455)
chr7 (32-178)||(14999101-14999246)
chr7 (51-184)||(46482625-46482759)
chr7 (23-152)||(7500454-7500583)
chr7 (107-184)||(14998064-14998140)
chr7 (24-184)||(31659622-31659785)
chr7 (25-152)||(3227109-3227236)
chr7 (20-98)||(17782579-17782658)
chr7 (22-152)||(31949320-31949451)
chr7 (22-152)||(127335-127464)
chr7 (51-115)||(34351520-34351584)
chr7 (22-152)||(3227566-3227697)
chr7 (23-184)||(34352726-34352888)
chr7 (23-95)||(20163585-20163658)
chr7 (51-152)||(47369809-47369910)
chr7 (51-99)||(11662576-11662624)
chr7 (26-152)||(17781663-17781790)
chr7 (22-97)||(34174010-34174085)
chr7 (23-100)||(31661033-31661111)
chr7 (32-97)||(47524533-47524599)
chr7 (24-184)||(47525306-47525468)
chr7 (51-99)||(48934928-48934976)
[»] scaffold1303 (1 HSPs)
scaffold1303 (21-152)||(1436-1568)
[»] chr6 (24 HSPs)
chr6 (23-145)||(3333005-3333128)
chr6 (55-184)||(1829543-1829672)
chr6 (22-181)||(16704440-16704600)
chr6 (24-184)||(7314880-7315041)
chr6 (38-179)||(26574999-26575140)
chr6 (22-152)||(6842255-6842386)
chr6 (37-184)||(10785853-10786000)
chr6 (21-184)||(7316233-7316398)
chr6 (21-152)||(27437825-27437957)
chr6 (22-184)||(8659263-8659427)
chr6 (22-141)||(8821871-8821991)
chr6 (23-184)||(3721611-3721774)
chr6 (51-184)||(26949125-26949255)
chr6 (22-150)||(6840192-6840319)
chr6 (20-152)||(27322040-27322172)
chr6 (77-152)||(5658810-5658885)
chr6 (22-152)||(26574617-26574747)
chr6 (22-98)||(3722533-3722610)
chr6 (32-184)||(29473085-29473238)
chr6 (136-184)||(14823515-14823563)
chr6 (23-152)||(8660176-8660305)
chr6 (57-115)||(12350832-12350889)
chr6 (25-184)||(12382650-12382811)
chr6 (21-80)||(4597652-4597712)
[»] scaffold0019 (2 HSPs)
scaffold0019 (24-152)||(60090-60219)
scaffold0019 (51-152)||(61431-61532)
[»] scaffold0320 (1 HSPs)
scaffold0320 (22-152)||(19486-19617)
[»] scaffold0003 (1 HSPs)
scaffold0003 (21-152)||(49405-49537)
[»] scaffold0586 (1 HSPs)
scaffold0586 (48-141)||(6368-6461)
[»] scaffold0302 (2 HSPs)
scaffold0302 (22-180)||(17468-17627)
scaffold0302 (24-173)||(18727-18877)
[»] scaffold0294 (1 HSPs)
scaffold0294 (22-152)||(5410-5541)
[»] scaffold2034 (2 HSPs)
scaffold2034 (51-184)||(261-394)
scaffold2034 (55-184)||(918-1047)
[»] scaffold0369 (1 HSPs)
scaffold0369 (13-137)||(13182-13305)
[»] scaffold0632 (1 HSPs)
scaffold0632 (22-184)||(3248-3410)
[»] scaffold0049 (2 HSPs)
scaffold0049 (8-145)||(7394-7532)
scaffold0049 (24-100)||(7538-7614)
[»] scaffold0186 (1 HSPs)
scaffold0186 (24-84)||(23081-23140)


Alignment Details
Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 19984846 - 19985010
Alignment:
Q  21 ataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    |||||||||| ||||||||||||| |  |||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||| |    
T  19984846 ataggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaaccc 19984945  T
Q  120 ttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
     ||||||| |||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||    
T  19984946 ctttgcatctttggtccttttggtcaattttgaccagtcaatgcctacgtggcatgccacatgtg 19985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 19986175 - 19986010
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccct--ctatgtacaataactacaattttaaccctttaagatttaact 118  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||   ||||||| || |||||||||||| ||||| |||||||||||     
T  19986175 taggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaacc 19986076  T
Q  119 cttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    | ||||||| ||||||| ||| |||||||||||| | |||||||||||| ||||||||||||||||    
T  19986075 cctttgcatctttggtcatttcggtcaattttgaccagtcaatgcctacgtggcatgccacgtgtg 19986010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 22776924 - 22776752
Alignment:
Q  13 aatagaatataggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaaga 111  Q
    |||| ||||||||||||| ||||||||||| || | || ||||| ||| ||||||||||||||| |||||||||| ||||||||||||  |||  |||||    
T  22776924 aataaaatataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaaga 22776825  T
Q  112 tttaactcttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
     ||| | | ||||||| |||||||| |||   ||||||||| | |||||||||||| ||||||||||||||||    
T  22776824 attagcccctttgcatatttggtccattttcccaattttgaccggtcaatgcctacgtggcatgccacgtgtg 22776752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 54540892 - 54540730
Alignment:
Q  23 aggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||||||| |  || ||||||||||||||||||||| |||  || |||||| ||||||||||||  |||  ||||||||| | | |    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccct 54540793  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||| ||||||| ||||||||||| | |||||||||||| ||||||||||||||||    
T  54540792 ttgcaactttgatcctttttgtcaattttgaccggtcaatgcctacgtggcatgccacgtgtg 54540730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 7758400 - 7758563
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||| ||| |  || ||||||||||||||||||||| ||| ||| |||||| ||||||||||||  |||  ||||||||||| |     
T  7758400 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccc 7758499  T
Q  121 tttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgt 183  Q
    |||| || |||||||||||||||||||||||| || ||||| || ||  |||||||||||||||    
T  7758500 tttgtatctttggtccttttggtcaattttgacctagtcaacgcttaagtggcatgccacgtgt 7758563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 49216247 - 49216408
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||| | |  |||||||||||| ||||||||||| ||| |||||||||| |||||||||| |  ||| |||||||||| ||| ||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagctcatt 49216346  T
Q  123 tgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| |||| || |||||| ||||||||| |  |||||| |||| ||||||| ||||||||    
T  49216347 tgcatctttgatcattttggccaattttgaccgatcaatgtctacgtggcatgtcacgtgtg 49216408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 12700173 - 12700335
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| |||||||| |||| | || ||||||||||||||||||||||||| ||| |||||| |||||||||||| ||||  || |||||| |        
T  12700173 taggctaaagtgcactttccccc-ctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagccaca 12700271  T
Q  122 ttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||| ||||||||||||||||||||||||  |  |||| |||||| ||||| ||||||||||    
T  12700272 ttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 12700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 7267642 - 7267804
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||| |||| |||||||||||||   || ||||||||||||||||||||||||| ||| |||||  ||||||||||||  |||  ||||||||| |        
T  7267642 taggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcctca 7267741  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||  ||||||||||||||||||| | |||||||| ||||||||| ||||||||||    
T  7267742 ttgcaactttaatccttttggtcaattttgaccggtcaatgcatacatggcacgccacgtgtg 7267804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 29931222 - 29931388
Alignment:
Q  20 tataggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaact 118  Q
    ||||||||||| ||||||||||| || | || |||||||||||||||||||| |||| |||  ||||| ||||||||||||  |||  |||||||||||     
T  29931222 tataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacc 29931321  T
Q  119 cttttgcatttttggtccttttggtcaattttga-actgtcaatgcctacatggcatgccacgtgtg 184  Q
    | |||||| |  | |||||||||||||||||||| || ||||| ||||  ||||||| |||||||||    
T  29931322 cctttgcaataatagtccttttggtcaattttgacacagtcaacgcctgtatggcattccacgtgtg 29931388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 29932810 - 29932641
Alignment:
Q  13 aatagaatataggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaaga 111  Q
    ||||||||  |||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||||| |||||||||||| |||| ||||||    
T  29932810 aatagaattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccc-ctaagtacaaaaactacaattttgaccccttaaga 29932712  T
Q  112 tttaactcttttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgt 181  Q
    ||||   | |||||| |  | |||||||||| ||||||||| || ||||| | || | |||||||||||||    
T  29932711 tttagtccctttgcaataatagtccttttggccaattttgacctagtcaacgtcttcctggcatgccacgt 29932641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 29980376 - 29980542
Alignment:
Q  20 tataggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaact 118  Q
    ||||||||||| ||||||||||| || | || |||||||||||||||||||| |||| |||  ||||| ||||||||||||  |||  |||||||||||     
T  29980376 tataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacc 29980475  T
Q  119 cttttgcatttttggtccttttggtcaattttga-actgtcaatgcctacatggcatgccacgtgtg 184  Q
    | |||||| |  | |||||||||||||||||||| || ||||| ||||  ||||||| |||||||||    
T  29980476 cctttgcaataatagtccttttggtcaattttgacacagtcaacgcctgtatggcattccacgtgtg 29980542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 29981964 - 29981795
Alignment:
Q  13 aatagaatataggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaaga 111  Q
    ||||||||  |||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||||| |||||||||||| |||| ||||||    
T  29981964 aatagaattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccc-ctaagtacaaaaactacaattttgaccccttaaga 29981866  T
Q  112 tttaactcttttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgt 181  Q
    ||||   | |||||| |  | |||||||||| ||||||||| || ||||| | || | |||||||||||||    
T  29981865 tttagtccctttgcaataatagtccttttggccaattttgacctagtcaacgtcttcctggcatgccacgt 29981795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 55192068 - 55191946
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||  ||| | |||| ||||| | |||||| ||||| || |||| |||||||||    
T  55192068 tttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctttgcaattttgatcatttttgtcaatttt 55191969  T
Q  151 gaactgtcaatgcctacatggca 173  Q
    || | || |||| ||||||||||    
T  55191968 gatcggttaatgtctacatggca 55191946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 46719973 - 46720070
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    ||||| |||| |||||||||| ||||||| || |||||||||||||  ||| ||||||||| | | ||||||| ||||||||||||||||||||||||    
T  46719973 aaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccatttgcatatttggtccttttggtcaattttga 46720070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 534497 - 534628
Alignment:
Q  22 taggctaaattgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||| |||||| || | ||||||||||||||||||| ||  |||||||||| ||||||||||||  |||  ||||||||| |       
T  534497 taggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagccta 534596  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    ||||||| |||||||| ||||| |||||||||    
T  534597 tttgcatctttggtccatttggccaattttga 534628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 6171324 - 6171183
Alignment:
Q  41 cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcctttt 140  Q
    |||||| |||||| ||||| |||  |||||||||| |||||||||| ||||| |||||| ||||| ||||||||||  | ||||||| ||||||||||||    
T  6171324 cccctctaagttttaaaaaattgtgattttggccc-ctatgtacaaaaactataattttgaccctctaagatttaaa-catttgcatctttggtcctttt 6171227  T
Q  141 ggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || |||||||||    ||||||||||| ||||| ||||| ||||    
T  6171226 ggccaattttgactaatcaatgcctacttggcacgccacatgtg 6171183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 54987103 - 54986970
Alignment:
Q  27 taaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgca 126  Q
    |||| ||||||||||||| | |||||||||||| |||| ||||| | || ||||||| || ||||| |||||| ||||| ||||||||| ||| ||||||    
T  54987103 taaagtgcacttttcccc-ctaagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcctttgca 54987005  T
Q  127 tttttggtccttttggtcaattttgaactgtcaat 161  Q
    | |||| || |||||| ||||||||| | ||||||    
T  54987004 tctttgatcattttggccaattttgaccggtcaat 54986970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 31645001 - 31645102
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    |||||||||||| |||||||||||| ||| || ||| ||||||||||||||||   ||||||||| | | ||||||| |||||||||||||  |||||||    
T  31645001 tttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatctttggtccttttgaccaatttt 31645100  T
Q  151 ga 152  Q
    ||    
T  31645101 ga 31645102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 34019218 - 34019117
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||||||||||||||| ||| ||| ||||||  |||||||||||   ||  ||| ||||| ||| ||||||| ||||||||||||||||||||||    
T  34019218 tttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcatttgcatctttggtccttttggtcaatttt 34019119  T
Q  151 ga 152  Q
    ||    
T  34019118 ga 34019117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 8456479 - 8456639
Alignment:
Q  25 gctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttg 124  Q
    |||||| ||||||||| ||| | || |||||||||||||||||||||| || |||  ||||| ||||||||||||  |||  ||||||||| |    |||    
T  8456479 gctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcctcattg 8456578  T
Q  125 catttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||  |||| ||||||| ||||||||||| || ||||| |||| | ||||||||||||||||    
T  8456579 caaatttgatccttttagtcaattttgacctagtcaacgcctgcgtggcatgccacgtgtg 8456639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 7268930 - 7268767
Alignment:
Q  21 ataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||| |||| ||||||||||||| | || ||||||||||||||||||||||||  ||| ||| |  ||||||||||||  ||   |||||||||   |     
T  7268930 ataggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtccc 7268831  T
Q  121 tttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
     ||||| ||||  |||||||| |||||||||| | |||||||| ||| ||||| ||||||||||    
T  7268830 attgcaattttaatccttttgatcaattttgaccggtcaatgcttacgtggcacgccacgtgtg 7268767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 23770476 - 23770346
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaac 154  Q
    ||||| || ||||||||| ||  ||||||||| ||||||||||||| |||  ||||||||||| | ||||||| ||| |||||||||||||| ||||| |    
T  23770476 aaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagatttaacccctttgcatctttagtccttttggtcaactttgacc 23770377  T
Q  155 -tgtcaatgcctacatggcatgccacgtgtg 184  Q
      ||||| || ||  ||||||||||||||||    
T  23770376 aagtcaacgcatatgtggcatgccacgtgtg 23770346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 46721322 - 46721192
Alignment:
Q  23 aggctaaattgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| |||||||||| ||| | || ||| ||||| |||| |||||  ||| |||||||||| |||||||||||||  ||  ||||||||| | | |    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccct 46721223  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||| |||||||||| |||||||||||||    
T  46721222 ttgcatatttggtccttctggtcaattttga 46721192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 47614185 - 47614347
Alignment:
Q  24 ggctaaattgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||| |||||| || ||||||||||||||||||||||||| ||| |||  | ||| ||||||||  |||  ||||||||| |   ||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctctt 47614284  T
Q  123 tgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| |||||| |||||||| ||||||||  |  |||| |||||| ||||| ||||||||||    
T  47614285 tgcatctttggtgcttttggttaattttgacttattcaacgcctacgtggcaggccacgtgtg 47614347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 51469967 - 51470101
Alignment:
Q  19 atataggctaaattgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaac 117  Q
    |||| ||||||| |||||||||||| | | || ||||||||||||||||||||||||| ||| |||| | ||| ||||||| | |||  ||||||||| |    
T  51469967 atattggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagc 51470066  T
Q  118 tcttttgcatttttggtccttttggtcaattttga 152  Q
     |  |||||  ||||||||||||| ||||||||||    
T  51470067 cccattgcaactttggtccttttgatcaattttga 51470101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 54539754 - 54539916
Alignment:
Q  23 aggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||||| | |  || ||||||||||||||||||||  ||| |||  ||||| |||||||||||| | ||  ||||||||| ||| |    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagctcat 54539853  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||| ||||||| | |||||||||   ||||| || ||| ||||||||||||||||    
T  54539854 ttgcaactttgatcctttttgccaattttgactggtcaaagcatacgtggcatgccacgtgtg 54539916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 12703606 - 12703525
Alignment:
Q  18 aatataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    |||| |||||||| ||||||||| ||||| || ||||||||| ||| ||||||||||| ||| |||||| ||||||||||||    
T  12703606 aataaaggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 12703525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 23769885 - 23769985
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    |||||| || ||||||||||   ||||||||| ||| |||||||||||| |||| | |||||||  ||| ||||||| ||||||||||||||||||||||    
T  23769885 tttcaacaagttgcaattttaatcctctatgtgcaaaaactacaattttgacccct-aagatttcgctcatttgcatctttggtccttttggtcaatttt 23769983  T
Q  151 ga 152  Q
    ||    
T  23769984 ga 23769985  T

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Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 47610687 - 47610519
Alignment:
Q  18 aatataggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaa 116  Q
    |||||||| |||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||| | ||| |||||||   |||  |||||||||     
T  47610687 aatataggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttag 47610588  T
Q  117 ctcttttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    | |  |||||  |||||||||||||  ||||||||| || ||||| ||  | |||||||||||| ||||    
T  47610587 ccccattgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 47610519  T

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Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 6250652 - 6250522
Alignment:
Q  48 aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 147  Q
    |||||| ||||| |||  ||||||| || |||||||||| | ||| ||||||| |||| ||||||||||| | ||||||| |||| ||||||||  ||||    
T  6250652 aagttttaaaaaattgtgattttggtcccctatgtacaaaacctaaaattttagccctctaagatttaac-catttgcatctttgatccttttgaccaat 6250554  T
Q  148 tttgaactgtcaatgcctacatggcatgccac 179  Q
    |||||    ||||||||||||||||| |||||    
T  6250553 tttgactaatcaatgcctacatggcacgccac 6250522  T

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Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 11671443 - 11671313
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| ||||||||| ||  | || |||||||||||||||||||| |||| |||  || || |||||||  ||| ||||  || |||||||| | |    
T  11671443 taggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaacccct 11671344  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    || ||| ||||||||||||| ||||||||||    
T  11671343 ttacatctttggtccttttgatcaattttga 11671313  T

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Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 51347265 - 51347430
Alignment:
Q  21 ataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    ||||| |||| |||||||| ||||||  |||||| ||||| |||||||||||| |||||||| |||| ||  |||||||| ||||  ||||||||||| |    
T  51347265 ataggttaaagtgcactttccccctcttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaattttgaccccctaagatttaaccc 51347364  T
Q  120 ttttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
     ||||||  |||| || ||||| ||||| |||| || ||||| || ||| ||||| || |||||||    
T  51347365 gtttgcaactttgatcattttgatcaatgttgacctagtcaacgcatacgtggcaggctacgtgtg 51347430  T

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Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 51037536 - 51037612
Alignment:
Q  24 ggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttta 100  Q
    ||||||| |||||||||| ||   || ||||||||| ||||||||||| ||||||||| |||| |||||||||||||    
T  51037536 ggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaatttta 51037612  T

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Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 8875904 - 8876035
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| |||||||||| || |  |||||  |||||  ||||||||| ||||  ||||||||| ||||||||||||  |||  ||||||||| |       
T  8875904 taggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagccaa 8876003  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    ||||||| |||||||||||| |||||||||||    
T  8876004 tttgcatatttggtccttttagtcaattttga 8876035  T

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Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 47609695 - 47609826
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| |  || ||||||||||||||||||||| ||| ||| |||| | ||| ||||||| | |||  ||||||||| | |     
T  47609695 taggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcccc 47609794  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
     |||||  |||||||||||||  |||||||||    
T  47609795 attgcaactttggtccttttgaccaattttga 47609826  T

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Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 47615594 - 47615516
Alignment:
Q  107 taagatttaactcttttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||||| | | ||||||| ||||||||||||||||||||||||  |  ||||||||||| ||||| ||||||||||    
T  47615594 taagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggcaggccacgtgtg 47615516  T

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Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 27853063 - 27852998
Alignment:
Q  16 agaatataggctaaattgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctat 80  Q
    ||||||||||||||| | |||||||| ||||| |||||||||||  ||||||||||||||| ||||    
T  27853063 agaatataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctat 27852998  T

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Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 52839036 - 52839197
Alignment:
Q  23 aggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| |||| |||||||| || || || |||||| ||| ||||||| ||||||| |||| | ||| ||||||||| |||| ||| ||||| | |      
T  52839036 aggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagcccca 52839135  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgt 183  Q
    |||||  |||  ||||||||||||||||||| | ||||| |||||  ||| | |||||||||    
T  52839136 ttgcaaatttcatccttttggtcaattttgaccggtcaaagcctatgtggtacgccacgtgt 52839197  T

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Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 24516474 - 24516562
Alignment:
Q  37 ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgc 125  Q
    |||||||| | || ||| ||||||||||||||||||| | ||| ||| || ||||||||||||  ||| |||||||||| ||| |||||    
T  24516474 ttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcctttgc 24516562  T

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Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 52104484 - 52104604
Alignment:
Q  27 taaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgca 126  Q
    |||| ||||||||||||| | || ||||||||| ||| |||||||| |||  |||||||| ||||| ||||||  ||   ||||||||||||| ||||||    
T  52104484 taaaatgcacttttcccc-ctaactttcaaaaagttgtaattttggtcct--atgtacaaaaactataattttggccacctaagatttaactcatttgca 52104580  T
Q  127 tttttggtccttttggtcaatttt 150  Q
    | ||||||| |||||  |||||||    
T  52104581 tctttggtcattttgaccaatttt 52104604  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 47615651 - 47615597
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccc 75  Q
    ||||||||| ||||||||||||| |  || |||||||||||||||||||||||||    
T  47615651 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccc 47615597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 51038897 - 51038815
Alignment:
Q  18 aatataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||||||| ||||||||||| | |  || ||| ||||| ||||||||||| ||| ||||| |||| ||||||||||||    
T  51038897 aatataggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaatttt 51038815  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 5029785 - 5029708
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||| ||||||||||||| | |  |||||||| |||||||||||||||  ||| |||| | ||| ||||||||    
T  5029785 taggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttt 5029708  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 28262187 - 28262244
Alignment:
Q  18 aatataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccc 75  Q
    ||||||||||||| ||||||||||||| | || ||||||||  |||| ||||||||||    
T  28262187 aatataggctaaagtgcacttttcccccctaactttcaaaacgttgcgattttggccc 28262244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 45157310 - 45157166
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| |||||||| |||| | |||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||| | ||    
T  45157310 aggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 45157211  T
Q  123 tgcatttttggtccttttggtcaattttgaactgtcaatgcctac 167  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||    
T  45157210 tgcatctttggtccttttggtcaattttgaccagtcaatgcctac 45157166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 39153192 - 39153056
Alignment:
Q  48 aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 147  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||| ||||| ||||||||||| | ||||||| |||||||||||||||||||    
T  39153192 aagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaat 39153093  T
Q  148 tttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| | |||||||||||| ||||||||||||||||    
T  39153092 tttgaccagtcaatgcctacgtggcatgccacgtgtg 39153056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 39151956 - 39152092
Alignment:
Q  48 aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 147  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||||||||| | ||||||| |||||||||||||||||||    
T  39151956 aagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagatttaacccctttgcatctttggtccttttggtcaat 39152055  T
Q  148 tttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| | |||||||||||| ||||||||||| ||||    
T  39152056 tttgaccagtcaatgcctacgtggcatgccacatgtg 39152092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 51685868 - 51685739
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| || || ||||||||| |||| ||||||||||||||||||||| |||||||||||| ||||  ||||||||| | |     
T  51685868 taggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccc 51685769  T
Q  121 tttgcatttttggtccttttggtcaatttt 150  Q
    ||||||| |||||||||||||| |||||||    
T  51685768 tttgcatctttggtccttttggccaatttt 51685739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 45156074 - 45156193
Alignment:
Q  48 aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 147  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||||||||||||| |||||||||||   |||| || ||||||| |||||||||||    
T  45156074 aagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagatttaacctctttgtatctttggtctttttggtcaat 45156173  T
Q  148 tttgaactgtcaatgcctac 167  Q
    ||||| | ||||||| ||||    
T  45156174 tttgaccagtcaatgtctac 45156193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 45148609 - 45148741
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||||||||||||||||||| ||| ||| || ||||||||||||  |||  ||||||||||| | ||||||| |||||||||||||| |||||||    
T  45148609 tttcaaaaacttgcaattttggccccctaagtaaaa-aactacaattttgcccccctaagatttaacccctttgcatctttggtccttttggccaatttt 45148707  T
Q  151 gaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || | ||||| |||||| ||||||||||| ||||    
T  45148708 gaccggtcaaagcctacgtggcatgccacatgtg 45148741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 14999280 - 14999442
Alignment:
Q  19 atataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaact 118  Q
    |||||||||||| || |||||||||| | || ||||||||||||||||||||| ||| ||| |||||| |||||||||||| | ||| |   ||||| ||    
T  14999280 atataggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctct---atttagct 14999376  T
Q  119 cttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    | | ||||  |||| ||||||| ||||||||||| | |||||||||||| |||||||||| |||||    
T  14999377 catctgcaactttgatcctttttgtcaattttgaccggtcaatgcctacgtggcatgccatgtgtg 14999442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 11436041 - 11436204
Alignment:
Q  23 aggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||||||| |  || |||||||||||||||||||||||| | || ||| || ||||||||||||  |||  ||||||||||| | |    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccat 11436140  T
Q  122 ttgcatttttggtccttttggtcaattttgaac-tgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||| |||||| ||||||||||||||||| |  ||||| |||||  ||||||||||| ||||    
T  11436141 ttgcatctttggttcttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtg 11436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 43060089 - 43059978
Alignment:
Q  41 cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcctttt 140  Q
    |||||| || ||||||||| ||| ||||||| |||  || |||||| |||||||||||| |||| |||||||||| ||| ||||||| ||||||||||||    
T  43060089 cccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctcatttgcatctttggtcctttt 43059990  T
Q  141 ggtcaattttga 152  Q
    ||||||||||||    
T  43059989 ggtcaattttga 43059978  T

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Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 45150073 - 45149910
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt-aaccctttaagatttaactct 120  Q
    |||| |||| ||||||||||||| | || |||||||||||||||||||||||||  || |||||| ||| ||||||||   |||  ||||||||| | |     
T  45150073 taggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccc 45149974  T
Q  121 tttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||| |||| ||||||||| ||||||||| | ||||| |||||| ||| ||||||||||||    
T  45149973 tttgcatctttgatccttttggccaattttgaccggtcaaagcctacgtggaatgccacgtgtg 45149910  T

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Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 44404441 - 44404603
Alignment:
Q  23 aggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||| |||||  || ||||||||||| |||||||| |||| ||| |||||| ||||| ||||||  |||  ||| ||||| |   |    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagccaat 44404540  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||| ||||||| |||||||||||||||| | |||||||||||| ||||| ||||||||||    
T  44404541 ttgcatctttggtcattttggtcaattttgaccggtcaatgcctacgtggcacgccacgtgtg 44404603  T

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Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 184
Target Start/End: Complemental strand, 39699867 - 39699707
Alignment:
Q  24 ggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctttt 123  Q
    ||||||| ||||||||||||| | || |||||| |||||||||||||| ||| ||| |||||  ||||||||||||  |||  ||||||||| | |  ||    
T  39699867 ggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagccccatt 39699768  T
Q  124 gcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||  |||  ||||||||||||||||||| | |||||||||||| ||||| |||| |||||    
T  39699767 gcaactttaatccttttggtcaattttgaccggtcaatgcctacgtggcacgccatgtgtg 39699707  T

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Target: chr1; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 11437302 - 11437171
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||| ||| |  || |||||||||||||||||||||| ||  || |||||| ||||||||||||  |||  ||||||||||| ||    
T  11437302 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagatttaaccct 11437203  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    ||| ||| |||| |||||||||||||||||||    
T  11437202 tttacatctttgatccttttggtcaattttga 11437171  T

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Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 43058796 - 43058914
Alignment:
Q  34 cacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttgg 133  Q
    ||||||| ||| | || ||| ||||||||||||||||| ||| ||| |||||| ||||||||||||| |||| ||||||||| | | ||| ||| ||||     
T  43058796 cactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctttacatctttga 43058895  T
Q  134 tccttttggtcaattttga 152  Q
    |||||||||||||||||||    
T  43058896 tccttttggtcaattttga 43058914  T

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Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 44412032 - 44411906
Alignment:
Q  58 aacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaactgt 157  Q
    ||||||||||||| | || ||| |||||| ||||||||||||| ||||||||||||||   | ||||||  |||| ||||||| | ||||||||| | ||    
T  44412032 aacttgcaattttagtcccctaagtacaaaaactacaattttacccctttaagatttaggccctttgcaactttgatcctttttgccaattttgaccggt 44411933  T
Q  158 caatgcctacatggcatgccacgtgtg 184  Q
    |||||||||| ||||| ||||||||||    
T  44411932 caatgcctacgtggcacgccacgtgtg 44411906  T

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Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 51684366 - 51684495
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||||| |  || ||| ||||| ||||||||||||||| ||||||| || ||||||||||||  |||  ||||||||| | | ||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcccctt 51684465  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||||| |||||||||||||| |||||||||    
T  51684466 tgcatctttggtccttttggccaattttga 51684495  T

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Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 39222575 - 39222445
Alignment:
Q  24 ggctaaattgcactttt--cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||| |||||||||  |||||  || ||||||||||||||||||||||||| ||| ||| || ||||||||| ||| |||| ||||||||  | | |    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgcccat 39222476  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||| ||||||| |||||| |||||||||    
T  39222475 ttgcatctttggtctttttgggcaattttga 39222445  T

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Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 50680329 - 50680460
Alignment:
Q  21 ataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||| |||| |||| ||||||||   || || |||||||||||||||||||||| ||| ||| || ||||| |||||||  ||  ||||||||||| |     
T  50680329 ataggttaaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccc 50680428  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    ||||||| |||| |||||||||||||||||||    
T  50680429 tttgcatctttgatccttttggtcaattttga 50680460  T

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Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 41 - 178
Target Start/End: Complemental strand, 24426158 - 24426020
Alignment:
Q  41 cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcctttt 140  Q
    |||||| || ||||||||||||||||||||||||| ||| |||||| |||||||||||||  ||  ||||||||| | |  |||||  |||| | |||||    
T  24426158 cccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgcaaatttgatactttt 24426059  T
Q  141 ggtcaattttgaact-gtcaatgcctacatggcatgcca 178  Q
    |||||||||||| || ||||| || | ||||||||||||    
T  24426058 ggtcaattttgacctagtcaacgcttgcatggcatgcca 24426020  T

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Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 24422798 - 24422962
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||| ||| |  || ||||||||||||||||||||| ||| ||| |||||| ||||||||||||  |||  ||||||||| | |     
T  24422798 taggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccc 24422897  T
Q  121 tttgcatttttggtccttttggtcaattttga-actgtcaatgcctacatggcatgccacgtgtg 184  Q
     |||||  |||| ||||||||||||||||||| |  ||||| ||||   ||||||||||||||||    
T  24422898 attgcaaatttgatccttttggtcaattttgacatagtcaacgcctgtgtggcatgccacgtgtg 24422962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 35067106 - 35066974
Alignment:
Q  21 ataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    |||||||||| ||||||||||||| |  |||||||||||| |||| |||||||||| ||||| |||| ||||||||||||  |||  ||| ||||| | |    
T  35067106 ataggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagccc 35067007  T
Q  120 ttttgcatttttggtccttttggtcaattttga 152  Q
     |||||| |  | ||||||||||||||||||||    
T  35067006 ctttgcaataatagtccttttggtcaattttga 35066974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 36612852 - 36612979
Alignment:
Q  23 aggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| |||| |||||||| |  || ||||||||| ||||||||||||  || || |||||| |||||||||||||||||  |||||||||   | |    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttggatct-taagtacaaaaactacaattttaaccccctaagatttagtccct 36612950  T
Q  122 ttgcatttttggtccttttggtcaatttt 150  Q
    |||||| ||||||| ||||||||||||||    
T  36612951 ttgcatctttggtcattttggtcaatttt 36612979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 36614010 - 36613843
Alignment:
Q  19 atataggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaac 117  Q
    |||| ||||||| |||| |||||| || | || ||| ||||||||| ||||||||||| ||| |||||| |||||||||||| ||||  ||||||||| |    
T  36614010 atattggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagc 36613911  T
Q  118 tcttttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
       ||||||  ||| ||||||||| ||||||||||  |  |||| |||||| ||||| ||||||||||    
T  36613910 ctctttgcaactttagtccttttgatcaattttgacttattcaacgcctacgtggcaggccacgtgtg 36613843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 52274967 - 52275130
Alignment:
Q  23 aggctaaattgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||| |||| | || ||||||||||||||||||||| ||| ||| |||||| ||||||||||||   ||  ||||||||| |        
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcctca 52275066  T
Q  122 ttgcatttttggtccttttggtcaattttga-actgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||| ||||||||||||||||||| |  ||||| |||| | |||||||||| |||||    
T  52275067 ttgcaaatttgatccttttggtcaattttgacatagtcaacgcctgcgtggcatgccaagtgtg 52275130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 35595296 - 35595131
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaactt-gcaattttggccctctatgtacaataacta-caattttaaccctttaagatttaact 118  Q
    ||||||||| || |||||||||| || || ||| |||||||| ||||||||| ||| ||||||| || ||||| |||||||  ||| | |||||||| |     
T  35595296 taggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccct-aagatttagcc 35595198  T
Q  119 cttttgcatttttggtccttttggtcaattttgaac-tgtcaatgcctacatggcatgccacgtgtg 184  Q
    | ||||||| |||||||||||||||||||||||| |  ||||||||  |  ||||||||||||||||    
T  35595197 cctttgcatctttggtccttttggtcaattttgaccaagtcaatgctgatttggcatgccacgtgtg 35595131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 30248168 - 30248240
Alignment:
Q  79 atgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    |||||||| ||||||||||||| |||| ||||||||||||| ||||||| |||| || |||||| |||||||||    
T  30248168 atgtacaaaaactacaatttta-ccctctaagatttaactcctttgcatctttgatcattttggccaattttga 30248240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 30249563 - 30249462
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||| ||| |||||||  | | ||||||||| |||||||||||| |||| |||||||||| ||| |||| || |||| || ||||| ||||||||    
T  30249563 tttcaaaaagttgtaattttgatcttttatgtacaaaaactacaattttgaccccttaagatttagctcatttgtatctttgatctttttgatcaatttt 30249464  T
Q  151 ga 152  Q
    ||    
T  30249463 ga 30249462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 33088719 - 33088642
Alignment:
Q  23 aggctaaattgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    |||||||| |||||||||||| ||| ||  |||||||||||||||||||| |||| || |||||| ||||||||||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaatttt 33088642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 35594216 - 35594377
Alignment:
Q  23 aggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||||| || | || ||||||||||||||||||||| ||| ||| |||  | |||||||||||| ||||  ||| ||||| | | |    
T  35594216 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccc-ctaagtattaaaactacaattttgaccc-ctaaaatttagcccct 35594313  T
Q  122 ttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||| |||||||||||| | |||||||||  | ||||| || ||  ||||||||||||||||    
T  35594314 ttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 35594377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 7674525 - 7674602
Alignment:
Q  21 ataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    |||||||||| ||| ||||||||| | || ||| |||||||||||||||||| || ||| |||||| ||||||||||||    
T  7674525 ataggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttgggcc-ctaagtacaaaaactacaatttt 7674602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 23980569 - 23980491
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||| ||||||||||||| || || ||| ||||||||||||||||||| | ||| |||||| ||||| ||||||    
T  23980569 taggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataatttt 23980491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 52827346 - 52827476
Alignment:
Q  23 aggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||||||| |  || ||||||||||||||||||||| ||| ||| |||| | ||| ||||||| | |||  ||||||||| | |      
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcccca 52827445  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||  |||||||||||||  |||||||||    
T  52827446 ttgcaactttggtccttttgaccaattttga 52827476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 14999950 - 14999901
Alignment:
Q  129 tttggtccttttggtcaattttgaactgtcaatgcctacatggcatgcca 178  Q
    |||| ||||||| ||||||||||| |||||||||||||| ||||||||||    
T  14999950 tttgatcctttttgtcaattttgacctgtcaatgcctacgtggcatgcca 14999901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 40384753 - 40384854
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||| |||||||||| | |  |||||||||| |||||||||||| | ||  ||| ||||| |   ||||||| |||||||||||||| |||||||    
T  40384753 tttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatcccctaaaatttagcctctttgcatctttggtccttttggccaatttt 40384852  T
Q  151 ga 152  Q
    ||    
T  40384853 ga 40384854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 50681705 - 50681632
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaat 96  Q
    ||||||| |||||||||||||||  || ||||||||||||||||||||||| |||||  || || |||||||||    
T  50681705 ggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaat 50681632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 41364829 - 41364957
Alignment:
Q  24 ggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctttt 123  Q
    ||||||| |||||||||| || | || ||||||||||||||||||||||||| |||  ||| | ||| |||||||   |||  ||||||||| | |  ||    
T  41364829 ggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagccccatt 41364928  T
Q  124 gcatttttggtccttttggtcaattttga 152  Q
    |||  ||||||| ||||| ||||||||||    
T  41364929 gcaactttggtcattttgatcaattttga 41364957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 52276266 - 52276106
Alignment:
Q  22 taggctaaattgcacttttcccct-cgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    |||| |||| |||||||| ||||| | || ||||||||| ||| ||||||||||| ||| |||||| ||||| || ||||  ||  ||||||||| | |     
T  52276266 taggttaaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagcccc 52276167  T
Q  121 tttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacg 180  Q
     |||||  |||| |||||||| |||||||||| || ||||| || | ||||||||||||||    
T  52276166 attgcaaatttgatccttttgatcaattttgacctagtcaacgcttgcatggcatgccacg 52276106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 7983047 - 7983178
Alignment:
Q  21 ataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||| |||| |||||||||| ||   || |||||| |||||||||||||||||| |||||||  | ||| ||||||||  |||  ||||||||| | |     
T  7983047 ataggttaaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatcccc 7983146  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
     |||||  |||  |||||||||||||||||||    
T  7983147 attgcaaatttcatccttttggtcaattttga 7983178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 52828173 - 52828042
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    |||| |||| ||||||||||||| || || ||||||||||||||||||||||| | ||| |||| | ||| |||||||   |||  ||||||||| | |     
T  52828173 taggttaaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 52828074  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
     |||||  |||||||||||||  |||||||||    
T  52828073 attgcaactttggtccttttgaccaattttga 52828042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 184
Target Start/End: Complemental strand, 43378786 - 43378652
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    |||||||||||| ||||||||  || ||| |||||| || ||||||||| |||   ||||||||| | | ||||||| |||  ||||||||||| |||||    
T  43378786 tttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgcatctttaatccttttggtcgatttt 43378687  T
Q  151 gaac-tgtcaatgcctacatggcatgccacgtgtg 184  Q
    || |  ||||| || ||  ||||||||||||||||    
T  43378686 gaccaagtcaacgcatatgtggcatgccacgtgtg 43378652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 31194109 - 31194170
Alignment:
Q  79 atgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcctttt 140  Q
    |||||||| ||||| ||||||  |||||||||||||| |  |||||||| ||||||||||||    
T  31194109 atgtacaaaaactaaaattttggccctttaagatttagcctttttgcatctttggtcctttt 31194170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 39221357 - 39221405
Alignment:
Q  23 aggctaaattgcactttt--cccctcgaagtttcaaaaacttgcaattt 69  Q
    ||||||||||||||||||  |||||| || |||||||||||||||||||    
T  39221357 aggctaaattgcacttttcccccctctaactttcaaaaacttgcaattt 39221405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 24332938 - 24333074
Alignment:
Q  48 aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 147  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||| ||||| ||||||||||| | ||||||| |||||||||||||||||||    
T  24332938 aagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaat 24333037  T
Q  148 tttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| | |||||||||||| ||||||||||||||||    
T  24333038 tttgaccagtcaatgcctacgtggcatgccacgtgtg 24333074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 19752911 - 19753073
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| ||||||||||||| | || ||||||||||||||||||||||||| ||| |||||| ||||||||||||  |||  || |||||| | |  |    
T  19752911 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccat 19753010  T
Q  123 tgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| ||||||||||||||||||||||||  |  |||| |||||| ||||| ||||||||||    
T  19753011 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 19753073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 28538674 - 28538837
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||| | || || ||||||||||||||||||||| |||  || |||||| ||||||||||||| |||  ||||||||| | |     
T  28538674 taggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccc 28538773  T
Q  121 tttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||  |||| ||||||| ||||||||||| | ||||||| |||  ||||||||||||||||    
T  28538774 tttgcaactttgatcctttttgtcaattttgaccggtcaatgtctatgtggcatgccacgtgtg 28538837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 2186774 - 2186899
Alignment:
Q  27 taaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgca 126  Q
    |||| |||| |||| ||| | |||||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||  ||||||||| |  |||| ||    
T  2186774 taaagtgcattttttccccctaagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagccattttaca 2186873  T
Q  127 tttttggtccttttggtcaattttga 152  Q
    | ||||||||||||||||||||||||    
T  2186874 tctttggtccttttggtcaattttga 2186899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 25523067 - 25523231
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| |  || |||||||||||||||||||| |||| ||| |||||| |||||||||||| ||||  ||||||||| | |     
T  25523067 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccc 25523166  T
Q  121 tttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||| |||| |||||||| ||||||||||  |  |||| |||||| |||| |||||||||||    
T  25523167 tttgcatctttgatccttttgatcaattttgatttattcaacgcctacgtggcctgccacgtgtg 25523231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 28539917 - 28539760
Alignment:
Q  27 taaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgca 126  Q
    |||| |||| |||||||| | || ||| ||||||||||||||||| ||||||| |||||| ||||||||||||   ||  |||||||||   | ||||||    
T  28539917 taaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgca 28539818  T
Q  127 tttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
      |||| ||||||| | ||||||||| | |||||||||||| ||||||||||||||||    
T  28539817 actttgatcctttttgccaattttgaccggtcaatgcctacgtggcatgccacgtgtg 28539760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 40255776 - 40255612
Alignment:
Q  21 ataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    |||||||||| |||||||||||||||  || ||| ||||||||||||||||| ||| |||  ||||  ||||||||||||  |||  ||||||||||| |    
T  40255776 ataggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaaccc 40255677  T
Q  120 ttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
      ||||| ||||  || ||||| |||||||||| | |||||||||||| |||| |||||||||||    
T  40255676 cattgcaattttaatctttttgatcaattttgaccggtcaatgcctacgtggcgtgccacgtgtg 40255612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 36486575 - 36486428
Alignment:
Q  37 ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcc 136  Q
    |||||||| | || ||| ||||||||||||||||| ||| ||| |||||| ||||||||||||   ||  |||||||||   | ||||||  |||| |||    
T  36486575 ttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccctttgcaactttgatcc 36486476  T
Q  137 ttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||| ||||||||||| | |||||||||||| ||||||||||||||||    
T  36486475 tttttgtcaattttgaccggtcaatgcctacgtggcatgccacgtgtg 36486428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 16650050 - 16650154
Alignment:
Q  81 gtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaac-tgtcaatgcctacatggcatgccac 179  Q
    |||||| |||||||||||| ||||| ||||||||||| | ||||||| |||||||||||||||||||||||| |  |||||||| |   |||||||||||    
T  16650050 gtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaattttgaccaagtcaatgcatgtgtggcatgccac 16650149  T
Q  180 gtgtg 184  Q
    |||||    
T  16650150 gtgtg 16650154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 18487005 - 18486841
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| |||||||| |||| |  || ||||||||||||||||||||||||| ||| ||| |  ||| ||||||||  |||  ||||||||| | |     
T  18487005 taggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccc 18486906  T
Q  121 tttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||| ||||||||||||||||||||||||  |  |||| |||||| ||||| ||||||||||    
T  18486905 tttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 18486841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 16650958 - 16650827
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||| | |  || ||| ||||||||||||||||| ||| ||| ||| || ||||||||||||| |||  |||| |||| | |     
T  16650958 taggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagccca 16650859  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    ||||||| ||||||||||||||||||||||||    
T  16650858 tttgcatctttggtccttttggtcaattttga 16650827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 42196307 - 42196172
Alignment:
Q  18 aatataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaa 116  Q
    ||||||||||||| |||||||| |||| |  || ||| ||||| |||  | ||||||||||||||||||| ||||||| |||||  ||  |||||||||     
T  42196307 aatataggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttag 42196208  T
Q  117 ctcttttgcatttttggtccttttggtcaattttga 152  Q
    | | ||||||| ||||||||||||||||||||||||    
T  42196207 cccatttgcatctttggtccttttggtcaattttga 42196172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 21835040 - 21835162
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| |||||||| |||||| |||||| ||||| |||  |||||| ||| |||||||||| |||||||||||| ||||  ||||||||||| | ||    
T  21835040 aggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttgaccccctaagatttaacccctt 21835139  T
Q  123 tgcatttttggtccttttggtca 145  Q
    ||||  |||| ||||||| ||||    
T  21835140 tgcaactttgatccttttagtca 21835162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 20214196 - 20214357
Alignment:
Q  24 ggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctttt 123  Q
    ||||||| |||||||||||||   || |||||||||||||||||||| || |||||||||||| ||||||||||||  ||| | |||| ||| | | |||    
T  20214196 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccctcaagaattatcccattt 20214295  T
Q  124 gcatttttggtccttttggtcaattttga-actgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||| |  | |||||||  |||||||||||  | ||||| ||||| |||||| ||||||||||    
T  20214296 gcaatagtagtcctttatgtcaattttgactcggtcaacgcctatatggcaggccacgtgtg 20214357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 22940723 - 22940563
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||||| |  || ||||||||||||||||||||||||| ||| |||||| || ||||||||| ||||  ||| ||||| | | ||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgaccc-ctaaaatttagcccctt 22940625  T
Q  123 tgcatttttggtccttttggtcaattttgaac-tgtcaatgcctacatggcatgccacgtgt 183  Q
    | ||| |||  ||||||||||||||||||| |  ||||| |||||  |||||||||||||||    
T  22940624 ttcatcttttatccttttggtcaattttgaccaagtcaacgcctaagtggcatgccacgtgt 22940563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 33160390 - 33160227
Alignment:
Q  21 ataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    |||||||||| ||||||||||||| |  || |||||||||||||||||||| |||| ||| ||| |  |||||||||||| |||| |||||||||| | |    
T  33160390 ataggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttagc-c 33160292  T
Q  120 ttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
      |||||  |||  ||||||| | ||||||||| | |||||||||||| ||||| ||||| ||||    
T  33160291 cattgcaactttaatccttttagccaattttgaccggtcaatgcctacgtggcacgccacatgtg 33160227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 25055407 - 25055574
Alignment:
Q  19 atataggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaac 117  Q
    |||||||||||| ||||||||||||| || || ||| ||   ||||||||||||  || ||||||| || ||||||||||||  |||  ||||||||| |    
T  25055407 atataggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagc 25055506  T
Q  118 tcttttgcatttttggtccttttggtcaattttgaac-tgtcaatgcctacatggcatgccacgtgtg 184  Q
     | ||||||| ||||||||||||| |||||||||| |  ||||||||  |  ||||||||||||||||    
T  25055507 ccatttgcatctttggtccttttgatcaattttgagcaagtcaatgctgatttggcatgccacgtgtg 25055574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 42195164 - 42195261
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    ||||| |||| |||||||||| |||||||||| | ||||||||||   ||  ||||||||| | | ||||||| ||||||||||||||||||||||||    
T  42195164 aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgcatctttggtccttttggtcaattttga 42195261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 1015478 - 1015645
Alignment:
Q  18 aatataggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaa 116  Q
    |||| |||| ||| ||||||||||| || | || ||| ||||| || |||||||||||| || ||||||| | |||||||||||||||  ||||| |||     
T  1015478 aataaaggcaaaaatgcacttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaattag 1015577  T
Q  117 ctcttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
      | ||||||| ||||||||||||   ||||||||| |  ||||||||||| || |||||||| ||||    
T  1015578 tccctttgcatatttggtccttttccccaattttgaccaatcaatgcctacgtgacatgccacatgtg 1015645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 19754217 - 19754102
Alignment:
Q  37 ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcc 136  Q
    |||||||| | || ||||||||||||||||||||||||| |||  ||||| ||||||||||||  |||  || |||||| | |  |||||| ||||||||    
T  19754217 ttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagccccattgcatctttggtcc 19754118  T
Q  137 ttttggtcaattttga 152  Q
    |||||  |||||||||    
T  19754117 ttttgaacaattttga 19754102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 36485332 - 36485457
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaac 154  Q
    |||||||| |||||||| ||   || |||||| ||||| ||||||  |||  ||||||||||| | ||||||  |||| || |||| ||||||||||| |    
T  36485332 aaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttgcaactttgatcatttttgtcaattttgacc 36485431  T
Q  155 tgtcaatgcctacatggcatgccacg 180  Q
     ||||||||||| |||||||||||||    
T  36485432 ggtcaatgcctatatggcatgccacg 36485457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 5778939 - 5778775
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| || || |||||||||||||||||||| |||| ||| |||| | ||| |||||||   |||  ||||||||| | |     
T  5778939 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 5778840  T
Q  121 tttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
     |||||  |||||||||||||  ||||||||| || ||||| ||  | |||||||||||| ||||    
T  5778839 attgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 5778775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 21835019 - 21834943
Alignment:
Q  24 ggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttta 100  Q
    ||||||| ||||||||||||||  |||||| ||||| |||||| |||| || |||||| |||| |||||||||||||    
T  21835019 ggctaaagtgcacttttcccctataagtttgaaaaagttgcaaatttgaccttctatgaacaaaaactacaatttta 21834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 25524158 - 25524070
Alignment:
Q  64 caattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    |||||||||||  ||| |||||| ||||| |||||| ||||  ||||||||| | | ||||||| ||| ||||||||||||||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatctttagtccttttggtcaattttga 25524070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 33158126 - 33158188
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatt 113  Q
    ||||||||||||||||||||| | | ||| |||||| |||||||||||| |||| ||||||||    
T  33158126 tttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgaccccttaagatt 33158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 34893693 - 34893739
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaatt 97  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||||    
T  34893693 tttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 1016932 - 1016804
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaac 154  Q
    ||||| ||| |||||||| | ||||||||||| |||||||||||| || |  ||||| ||| ||| |||||||  |||||| ||||   ||||||||| |    
T  1016932 aaaaaattgtaattttggtcttctatgtacaaaaactacaattttgactc-ctaagaattagctcctttgcatagttggtcattttccccaattttgatc 1016834  T
Q  155 tgtcaatgcctacatggcatgccacgtgtg 184  Q
     |||||||||||| | ||||| ||||||||    
T  1016833 ggtcaatgcctacgtagcatgtcacgtgtg 1016804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 25056482 - 25056390
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagattta 115  Q
    ||||||| ||||||||||| |||  || ||||||||||||||||||||| ||| ||| |||  | |||||||||||| ||||  |||||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagattta 25056390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 18485132 - 18485190
Alignment:
Q  18 aatataggctaaattgcactttt-cccctcgaagtttcaaaaacttgcaattttggccc 75  Q
    |||| |||||||| ||||||||| |||||| || ||| |||||||||||||||||||||    
T  18485132 aataaaggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccc 18485190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 20216866 - 20216788
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    |||| |||| ||||||||||||| |  || |||||||||||||||||||| || | |||| ||||| ||||||||||||    
T  20216866 taggttaaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaatttt 20216788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 1797398 - 1797237
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| || | |||| ||||  |||||| ||||||||||||||||||| |  |||  |||| ||||||||||||   || |||||||||| | | ||    
T  1797398 aggctaaagtggattttttccctttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagcccctt 1797299  T
Q  123 tgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||  |||| | | |||  |||||||||| | |||||||||||  ||||| ||||| ||||    
T  1797298 tgcaactttgattccttttttcaattttgaccggtcaatgcctatgtggcacgccacatgtg 1797237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 25524232 - 25524152
Alignment:
Q  21 ataggctaaattgcacttttcccctcg--aagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    |||||||||| ||||||||||||| |   || ||| ||||| ||| ||||||||||| ||| |||||| ||||||||||||    
T  25524232 ataggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 25524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 1796082 - 1796130
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    |||||||||||||||| |||||||  ||| |||||| ||||||||||||    
T  1796082 tttcaaaaacttgcaactttggccacctaagtacaaaaactacaatttt 1796130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 5730934 - 5730834
Alignment:
Q  52 ttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttg 151  Q
    ||||||||||| |||||||||||| ||| |||| | ||| |||||||   |||  ||||||||||| |  |||||  |||||| |||||| |||||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaatttagtccccctaagatttaaccccattgcaactttggttcttttgatcaattttg 5730835  T
Q  152 a 152  Q
    |    
T  5730834 a 5730834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 5777899 - 5777974
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattt 98  Q
    ||||||||| |||||||| |||| | || ||||||||||||||||||||| ||| ||| |||| | ||| |||||||    
T  5777899 taggctaaagtgcactttccccc-ctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 5777974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 7311618 - 7311682
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagattta 115  Q
    ||||||||||||||||| ||||||  | | |||||| ||||||||||||| |||  |||||||||    
T  7311618 tttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagattta 7311682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 802692 - 802531
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| || |||||||||| | |||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||| |||||||| || | ||    
T  802692 aggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctt 802593  T
Q  123 tgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| ||||||||||| |||||||||||| | |||||| ||||  ||||||| || |||||    
T  802592 tgcatatttggtcctttaggtcaattttgagcagtcaatacctaggtggcatgtcatgtgtg 802531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 22588055 - 22587894
Alignment:
Q  23 aggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| |||| ||||||||||  || ||||||||||||||||||||||||| |||||||||| ||||||||||||  ||| |||||||||| | | |    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggccc-ctatgtacaaaaactacaattttggccccttaagatttagcccct 22587957  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||| |||||||||||||| |||||| || | ||||| | |||  ||||||||||||||||    
T  22587956 ttgcatctttggtccttttggccaatttcgaccagtcaacgtctatgtggcatgccacgtgtg 22587894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 810857 - 810721
Alignment:
Q  48 aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 147  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||| |||||||| || | ||||||| ||||||||||| | |||||    
T  810857 aagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcatatttggtcctttagatcaat 810758  T
Q  148 tttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| | |||||| ||||  ||||||| || |||||    
T  810757 tttgagcagtcaatacctaggtggcatgtcatgtgtg 810721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 38840606 - 38840433
Alignment:
Q  12 taatagaatataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaag 110  Q
    ||||| || |||||||||| ||||||||||||| |  || |||||||||||||||||||| |||| ||| |||||| ||||||||||||| |||  ||||    
T  38840606 taataaaaaataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaag 38840507  T
Q  111 atttaactcttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| | |  ||||| ||||  |||||||| |||||||||| | ||||||||||||  ||| |||||||||||    
T  38840506 atttagccccattgcaattttaatccttttgatcaattttgaccggtcaatgcctacgcggcgtgccacgtgtg 38840433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 18906090 - 18905960
Alignment:
Q  22 taggctaaattgcacttttcccct-cgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| |||||||||||||| | || |||||||||||||||||||| |||| ||| |||||| ||||||||||||| |||  ||||||||| |||     
T  18906090 taggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccc-ctaagatttagctca 18905992  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    ||||||| ||||||| ||||| ||||||||||    
T  18905991 tttgcatctttggtctttttgatcaattttga 18905960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 36449772 - 36449939
Alignment:
Q  18 aatataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaa 116  Q
    ||||||||||||| ||||||||||||| |  || ||||||||||||||||||||||||| ||| |||||| ||||||||||||  |||   |||| |||     
T  36449772 aatataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaattag 36449871  T
Q  117 ctcttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
      | |||||| ||||| ||||||||  ||||||||| | |||||||||||| |||||||||| |||||    
T  36449872 gccctttgcaattttgatccttttgaccaattttgaccggtcaatgcctacgtggcatgccatgtgtg 36449939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 22587529 - 22587661
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||| || ||||||||| || |||| ||||| ||||||||||||  |||  ||||||||| |   ||||||| |||||||||||||| |||||||    
T  22587529 tttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagcctctttgcatctttggtccttttggccaatttt 22587627  T
Q  151 gaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || | |||||||||||||||||||||||||||||    
T  22587628 gaccagtcaatgcctacatggcatgccacgtgtg 22587661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 152
Target Start/End: Original strand, 13030293 - 13030418
Alignment:
Q  25 gctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttg 124  Q
    |||||| ||||||||||||| | || ||||||||||||| ||||||||||| ||| |||||| || |||||||||  |||  ||||||||| ||||||||    
T  13030293 gctaaagtgcacttttcccc-ctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttttgccccctaagatttagctcttttg 13030390  T
Q  125 catttttggtccttttggtcaattttga 152  Q
    ||| ||||||| ||||||||||||||||    
T  13030391 catctttggtcattttggtcaattttga 13030418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 51 - 184
Target Start/End: Complemental strand, 41879285 - 41879152
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||||||||||||||||||| ||| |||||  |||||||||||||||||  ||| ||||| | |  ||||| ||||  || ||||| ||||||||    
T  41879285 tttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagcaccattgcaattttaatcattttgatcaatttt 41879186  T
Q  151 gaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || | |||||||||||| |||| |||||||||||    
T  41879185 gaccagtcaatgcctacgtggcgtgccacgtgtg 41879152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 11258913 - 11258754
Alignment:
Q  23 aggctaaattgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| |||| ||| ||| ||| || ||||||||||||||||||||||||| ||| |||||| |||||||||||||  ||  ||||||||| | |      
T  11258913 aggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagcccca 11258814  T
Q  122 ttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacg 180  Q
    |||||  |||| ||||||||||||||||||| || ||||| || | ||||||||||||||    
T  11258813 ttgcagatttgatccttttggtcaattttgacctagtcaacgcttgcatggcatgccacg 11258754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 18300829 - 18300697
Alignment:
Q  18 aatataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaac 117  Q
    |||||| |||||||||||||||||||| | || ||||| ||||||||||||||| ||| ||| |||||| |||||||||||| ||||  ||  ||||| |    
T  18300829 aatataagctaaattgcacttttcccc-ctaactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttgaccc-ctataatttagc 18300732  T
Q  118 tcttttgcatttttggtccttttggtcaattttga 152  Q
     | ||||||| |||||||||||||| |||||||||    
T  18300731 ccctttgcatctttggtccttttggacaattttga 18300697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 7899985 - 7899822
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| |  || |||||||||||||||||||||| || ||| |||||  ||||||||||||| |||  ||||||||| | |     
T  7899985 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcccc 7899886  T
Q  121 tttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
     ||| |  |||  || |||||||||||||||| | |||||||| ||| ||||| ||||||||||    
T  7899885 attgtaactttaatctttttggtcaattttgaccggtcaatgcatacgtggcacgccacgtgtg 7899822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 36451023 - 36450864
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||| |||| |||||||||||||   || |||||||||||||||||||||| || ||| |||||  |||||||||||   |||   |||| ||| ||| |    
T  36451023 taggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcct 36450924  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgt 181  Q
    ||||| ||||| ||||||||| |||||||||   |||||||||||| |||||| ||||||    
T  36450923 ttgcaattttgatccttttggccaattttgactggtcaatgcctacgtggcataccacgt 36450864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 11996739 - 11996836
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    ||||| |||| |||||| ||| |||||||||| |||||||||||||   || ||||||||||| | ||| ||| ||||||||||||||||||||||||    
T  11996739 aaaaagttgcgattttgaccccctatgtacaaaaactacaattttagttctctaagatttaacccctttacatctttggtccttttggtcaattttga 11996836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 18299373 - 18299502
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||| | || || |||||||||||| |||||||||||  ||| ||| || ||||||||||||  |||  || |||||| | ||||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagcccttt 18299472  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||||| |||| |||||||||||||||||||    
T  18299473 tgcatctttgatccttttggtcaattttga 18299502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 22848190 - 22848353
Alignment:
Q  23 aggctaaattgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||| |||| | || |||||||||||||||||||||| || |||  ||||| ||||||||||||  | |  ||||||||| | | |    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccct 22848289  T
Q  122 ttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  ||||||||||||| ||||||||||  |  |||| |||||| ||||| ||||||||||    
T  22848290 ttgcagctttggtccttttgatcaattttgacttattcaacgcctacgtggcaagccacgtgtg 22848353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 7898682 - 7898852
Alignment:
Q  15 tagaatataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatt 113  Q
    ||||| ||||| |||| |||||||||| || |  || |||||||||||||||||||| |||  ||| ||| |  ||||||||||||  |||  |||||||    
T  7898682 tagaaaataggttaaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatt 7898781  T
Q  114 taactcttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || | |  ||||| ||||  |||||||| |||||||||| | |||||||| ||| ||||||||||||||||    
T  7898782 tagccccattgcaattttaatccttttgatcaattttgaccagtcaatgcttacgtggcatgccacgtgtg 7898852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 24475252 - 24475353
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||||||| |||||| |||| ||| ||| || ||||||||||||  |||  ||  ||||| ||| ||||||| ||||||||||||||||||||||    
T  24475252 tttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagctcatttgcatctttggtccttttggtcaatttt 24475351  T
Q  151 ga 152  Q
    ||    
T  24475352 ga 24475353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 38839270 - 38839403
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    |||||||||||||||||||| |||| |||  ||||| ||||||||||||  |||  ||||||||| | |  ||||| ||||  || ||||||||||||||    
T  38839270 tttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagccccattgcaattttaatcattttggtcaatttt 38839369  T
Q  151 gaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || | |||||||| ||| |||| |||||| ||||    
T  38839370 gacccgtcaatgcttacgtggcgtgccacttgtg 38839403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 18797243 - 18797409
Alignment:
Q  21 ataggctaaattgcacttttcc--cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaact 118  Q
    |||||||||| |||||||||||  || | || ||||||||||||||||||||| |||  || |||  | |||||||||||| ||||  ||| ||||| |     
T  18797243 ataggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcc 18797342  T
Q  119 cttttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    | ||||||| |||||||||||| | |||||||||  | ||||| || ||  ||||||||||||||||    
T  18797343 cctttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 18797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 23869637 - 23869511
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| ||||||||||| | |  |  || ||||||||||||||||||||| |||  ||||| ||||||||||||| | |  ||||||||| | | |    
T  23869637 taggctaaagtgcacttttccacccttaactttaaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccct 23869538  T
Q  122 ttgcatttttggtccttttggtcaatt 148  Q
    |||||| |||| |||||||| ||||||    
T  23869537 ttgcatctttgatccttttgttcaatt 23869511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 13567983 - 13568048
Alignment:
Q  35 acttttcccct-cgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||  ||||| ||||||||||||    
T  13567983 acttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaatttt 13568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 18869251 - 18869134
Alignment:
Q  37 ttttcccctcgaagtttcaaaaacttg-caattttggccctctatgtacaataactacaattttaaccctttaagatttaactc-ttttgcatttttggt 134  Q
    ||||| |||| || ||||||||| ||| ||||||||||| |||| |||||| |||||||||||| | ||  ||||||||| | | |||||||| ||||||    
T  18869251 ttttcacctctaactttcaaaaatttggcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagcccattttgcatctttggt 18869152  T
Q  135 ccttttggtcaattttga 152  Q
    | ||||| ||||||||||    
T  18869151 ctttttgatcaattttga 18869134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 32739651 - 32739699
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  32739651 tttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt 32739699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 41878092 - 41878234
Alignment:
Q  24 ggctaaattgcacttttcccctcgaagtttcaaaaact---tgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||| |||||||| ||||   || |||||||||||   |||||||||||||| ||| |||||  ||||||||||||  ||| |||||||||| | |     
T  41878092 ggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagcccc 41878191  T
Q  121 tttgcatttttggtccttttggtcaattttgaactgtcaatgc 163  Q
     ||||| ||||  || |||||||||||||||| | ||||||||    
T  41878192 attgcaattttaatctttttggtcaattttgaccggtcaatgc 41878234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 18904365 - 18904443
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||| ||||||||||||| |  || |||||||||| ||||||||||||||  || |||||| ||||||||||||    
T  18904365 taggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaatttt 18904443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 26545594 - 26545493
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||| ||||||||||| |||  ||  ||||| || || |||||| ||||| ||||||||| | | ||||||| ||||||| ||||| ||||||||    
T  26545594 tttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagcccctttgcatctttggtcattttgatcaatttt 26545495  T
Q  151 ga 152  Q
    ||    
T  26545494 ga 26545493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 32739693 - 32739812
Alignment:
Q  64 caattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaactgtcaatgc 163  Q
    |||||||||||| | || ||||| ||||||||||||  ||| ||||||||||    |||| ||| |||||||| ||||| ||||||||| | ||||| ||    
T  32739693 caattttggccccc-atatacaaaaactacaattttggccccttaagatttagtcattttccatctttggtccatttggccaattttgaccggtcaacgc 32739791  T
Q  164 ctacatggcatgccacgtgtg 184  Q
    |||||| |||  |||||||||    
T  32739792 ctacatcgcacaccacgtgtg 32739812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 11938891 - 11938761
Alignment:
Q  22 taggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||| || | || |||||||||||||||||||||| |  ||| |||||| || || ||||||  |||  ||||| ||| ||||    
T  11938891 taggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaa-aaatataattttgcccccctaagaattagctct 11938793  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    |||||| ||||| || |||| | |||||||||    
T  11938792 tttgcaattttgatcatttttgccaattttga 11938761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 18868922 - 18869000
Alignment:
Q  22 taggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||| || |||||||| || | || ||||||||||||||||||||||||  |||  ||||| ||||||||||||    
T  18868922 taggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaatttt 18869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 28617950 - 28618050
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    |||||||| |||||||||||||||| | | |||||| |||| |||||||  |||  ||||||||| | | ||||||| ||||||  |||||||| |||||    
T  28617950 tttcaaaatcttgcaattttggccccccaagtacaaaaacttcaatttt-gccccctaagatttagcccctttgcatctttggttattttggtctatttt 28618048  T
Q  151 ga 152  Q
    ||    
T  28618049 ga 28618050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 21837355 - 21837304
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccc 75  Q
    |||||||| ||||||||| ||| | || |||||||||||||||||||||||||    
T  21837355 aggctaaagtgcactttttccc-ctaactttcaaaaacttgcaattttggccc 21837304  T

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Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 1290301 - 1290137
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| |  || |||||||| |||||||||||||||||||| |||||| ||||||||||||| |||  ||||||||||| |     
T  1290301 taggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccc 1290202  T
Q  121 tttgcatttttggtccttttggtcaattttgaac-tgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||| |||||||||||||||||||||||| |  ||||| |||||  ||||||||||| ||||    
T  1290201 tttgcatctttggtccttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtg 1290137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 184
Target Start/End: Complemental strand, 31601086 - 31600925
Alignment:
Q  24 ggctaaattgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||| |||||| || ||| ||||||||||||||||| ||| ||| |||||| |||||||||||| |||| |||||||||| | | ||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccatt 31600987  T
Q  123 tgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||  |||| ||||||| ||||||||||| | |||||||||||  ||||||||||||||||    
T  31600986 tgcaactttgatcctttttgtcaattttgaccggtcaatgcctatgtggcatgccacgtgtg 31600925  T

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Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 10448336 - 10448200
Alignment:
Q  48 aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 147  Q
    |||||||||||| |||| ||||| |||| |||||||||| ||||||||||||  |||| |||||| || | | ||||||| |||||||||||||| ||||    
T  10448336 aagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccctttgcatctttggtccttttggccaat 10448237  T
Q  148 tttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| | |||||||||||| ||||||||||||||||    
T  10448236 tttgaccagtcaatgcctacgtggcatgccacgtgtg 10448200  T

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Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 10447006 - 10447168
Alignment:
Q  24 ggctaaattgcacttttcccc-tcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||| ||||||||||||| ||  |||||||||||| |||||||||| |||| |||||||||| ||| ||||||||| |||  ||||||||| | | |    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccct 10447105  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||| ||||||||||||||  |||||| | | |||||||||||| ||||| ||||||||||    
T  10447106 ttgcatctttggtccttttggctaattttaaccagtcaatgcctacgtggcacgccacgtgtg 10447168  T

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Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 12129626 - 12129785
Alignment:
Q  27 taaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgc 125  Q
    |||| |||||||||||||||  || |||||||||||||||||||||||||  || |||||| |||||||||||| |||| |||||||||| | | |||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T
Q  126 atttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    || ||||||| ||||| ||||||||||  |  |||| |||||| ||||| ||||||||||    
T  12129726 atctttggtcattttgatcaattttgacttattcaacgcctacgtggcaggccacgtgtg 12129785  T

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Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 26421724 - 26421562
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||| ||  ||| |||||| |||||||||||| |||| |||||||||| | |      
T  26421724 taggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttagc-cca 26421626  T
Q  122 ttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||| || |||| ||||||||| || | ||||| |||| | ||||||||||||||||    
T  26421625 ttgcaaatttgatcattttagtcaattttaaaatagtcaacgcctgcgtggcatgccacgtgtg 26421562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 172
Target Start/End: Complemental strand, 8758935 - 8758789
Alignment:
Q  27 taaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgc 125  Q
    |||| ||||||||||||| |  || ||||||||||||||||||||||||| ||| |||||  ||||||||||||  ||| |||||||||| |||  ||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagctccattgc 8758836  T
Q  126 atttttggtccttttggtcaattttgaactgtcaatgcctacatggc 172  Q
    | ||||  ||||||||||||||||||| |  ||||||||||| ||||    
T  8758835 aattttaatccttttggtcaattttgatcgatcaatgcctacgtggc 8758789  T

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Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 37728634 - 37728537
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    ||||| ||||||||||||||  |||||||||| |||||||||||| ||||||||||||||| ||  ||||||| |||| ||||||| |||||||||||    
T  37728634 aaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagatttagcttctttgcatctttgatccttttagtcaattttga 37728537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 31599803 - 31599950
Alignment:
Q  37 ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcc 136  Q
    |||||||| | || ||| ||||||||||||||||| ||| ||| |||||| ||||||||||||   ||  ||||||||| | | ||||||  |||| |||    
T  31599803 ttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccctttgcaactttgatcc 31599902  T
Q  137 ttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||| | ||||||||| | |||||||||||| ||||||||||||||||    
T  31599903 tttttgccaattttgaccggtcaatgcctacgtggcatgccacgtgtg 31599950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 19750673 - 19750547
Alignment:
Q  26 ctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgc 125  Q
    ||||| ||||||||||||| | || ||| ||||||||||||||||||||| ||| |||||| ||||||||||||| |||  ||||||||| | |  ||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19750574  T
Q  126 atttttggtccttttggtcaattttga 152  Q
    |  |||| |||||||||||| ||||||    
T  19750573 aaatttgatccttttggtcacttttga 19750547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 19789133 - 19789259
Alignment:
Q  26 ctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgc 125  Q
    ||||| ||||||||||||| | || ||| ||||||||||||||||||||| ||| |||||| ||||||||||||| |||  ||||||||| | |  ||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19789232  T
Q  126 atttttggtccttttggtcaattttga 152  Q
    |  |||| |||||||||||| ||||||    
T  19789233 aaatttgatccttttggtcacttttga 19789259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 49308130 - 49308052
Alignment:
Q  21 ataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    |||||||||| ||||||||||||| | || ||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  49308130 ataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 49308052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 5526228 - 5526065
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||||||| ||| |||  | ||| |||||||   |||  ||||||||| | |      
T  5526228 taggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagcccca 5526129  T
Q  122 ttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| ||||||||||||||  ||||||||| || ||||| ||  | |||||||||||| ||||    
T  5526128 ttgcaattttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 5526065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 1834119 - 1834249
Alignment:
Q  24 ggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt-aaccctttaagatttaactctt 121  Q
    ||||||| ||||||||||||| || || ||| |||||||| |||||||| ||| ||||||| || ||||||||||||   |||  ||||||||| | | |    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccat 1834218  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||| ||||||||||||||||||||||||    
T  1834219 ttgcatctttggtccttttggtcaattttga 1834249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 1835205 - 1835041
Alignment:
Q  22 taggctaaattgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| |||||||||||  | | || ||||||||||||||||||||| ||| ||| |||  | |||||||||||| ||||  ||||||||| | |     
T  1835205 taggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccc 1835106  T
Q  121 tttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||| |||||||||||| | |||||||||  | ||||| || ||  ||||||||||||||||    
T  1835105 tttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 1835041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 25685925 - 25685761
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||| | ||| |||||||  ||||  ||||||||| | |     
T  25685925 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagcccc 25685826  T
Q  121 tttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
     |||||  |||||||||||||  ||||||||| || ||||| ||  | |||||||||||| ||||    
T  25685825 attgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 25685761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 8757673 - 8757822
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| ||||||||| |||   || |||||||||||| ||||||| |||| ||| |||||  ||||||||||||   || |||||||||| | |      
T  8757673 taggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagcccca 8757772  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggc 172  Q
    ||||| ||||  |||||||||||||||||| || |||||||||||| ||||    
T  8757773 ttgcaattttaatccttttggtcaattttg-acggtcaatgcctacgtggc 8757822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 1289125 - 1289226
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||| | ||| |||||||  |||||| ||| || ||||||||||||| ||  |||||||||||| |  |||||| ||||||||||||||||||||||    
T  1289125 tttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaacccccttgcatctttggtccttttggtcaatttt 1289224  T
Q  151 ga 152  Q
    ||    
T  1289225 ga 1289226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 17382987 - 17383068
Alignment:
Q  18 aatataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||||||| |||||||||| || | || |||||||||||||||||||||| ||  || |||||| ||||||||||||    
T  17382987 aatataggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaatttt 17383068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 50909774 - 50909634
Alignment:
Q  24 ggctaaattgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccct-ttaagatttaactctt 121  Q
    ||||||| ||||||||| || | | |||||| ||||| |||| |||||| | | ||||||| || |||||||||||| ||||  |||||||||| | | |    
T  50909774 ggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagcccct 50909675  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatg 162  Q
    |||||| ||||||||||||| |||||||||| | |||||||    
T  50909674 ttgcatctttggtccttttgatcaattttgaccggtcaatg 50909634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 1963194 - 1963273
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttta 100  Q
    ||||||||| ||||||||||||| |  || ||||||||| ||||||||||||||  |||||||||| |||||||||||||    
T  1963194 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaatttta 1963273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 17388315 - 17388236
Alignment:
Q  20 tataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||||| ||||||||||||| | || |||||||||||||||||||||| ||  || |||||  ||||||||||||    
T  17388315 tataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaatttt 17388236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 21177995 - 21178157
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| || ||||| |||| | || ||||| ||| |||||||||||  || ||||| |||| |||||||||||| ||||  ||| ||||| | |||    
T  21177995 taggctaaagtgtactttccccccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagccctt 21178094  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||| || |||| | |||||||||   |||||||||||  ||||| ||||||||||    
T  21178095 ttgcaactttgatcatttttgccaattttgactggtcaatgcctatgtggcacgccacgtgtg 21178157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 49306773 - 49306902
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| |||||||||  || | || |||||||||||||||||||||||| | || |||||| ||||||||||||  |||  || ||||||    ||    
T  49306773 taggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaatttt-gcccaatatgatttagtcatt 49306871  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||| ||||||||||||  ||||||||||    
T  49306872 ttgcatctttggtcctttttatcaattttga 49306902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 25684934 - 25685063
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||||| |  || ||||||||||||||||||||| ||||||| |||| | ||| |||||||   |||  ||||||||| | |  |    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagccccat 25685033  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||||  ||||||||||||| ||||||||||    
T  25685034 tgcaactttggtccttttgatcaattttga 25685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 35934347 - 35934503
Alignment:
Q  27 taaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgca 126  Q
    |||| ||||||||||||| | || ||||||||||||| |||||||| || ||| ||| |  || || ||||||  ||| |||||||||| | |  |||||    
T  35934347 taaagtgcacttttcccc-ctaactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccccattgca 35934445  T
Q  127 tttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
      |||  | ||||||||||||||||| | |||||||||||| ||||||| ||||||||    
T  35934446 actttaattcttttggtcaattttgaccagtcaatgcctacgtggcatgtcacgtgtg 35934503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 27258029 - 27257969
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagattta 115  Q
    ||||| ||||||||||| |||||||| ||||| |||| |||||||||||| ||||||||||    
T  27258029 aaaaagttgcaattttgaccctctatatacaaaaactccaattttaaccccttaagattta 27257969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 54107957 - 54108020
Alignment:
Q  121 tttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||| ||||||| |||||| ||||||| | | |||||||||||||||||| ||||||||||    
T  54107957 tttgcatctttggtctttttggccaattttaaccagtcaatgcctacatggcacgccacgtgtg 54108020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 10470545 - 10470675
Alignment:
Q  23 aggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||||||| |  || ||||||||||||||||||||| ||||||| |||| | ||  |||||||   |||  ||||||||| | |      
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagcccca 10470644  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||  ||||||||||||| ||||||||||    
T  10470645 ttgcaactttggtccttttgatcaattttga 10470675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 184
Target Start/End: Complemental strand, 10471489 - 10471327
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||||| |  || ||||||||||||||||||||||||| ||| |||| | ||| |||||||   |||  ||||||||| | |  |    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 10471390  T
Q  123 tgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||  |||||||||||||  ||||||||| || ||||| ||  | |||||||||||| ||||    
T  10471389 tgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 10471327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 13509461 - 13509331
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| || |||||||||| | || ||| ||||| ||||||||||||||| | | |||  | |||||||||||| | ||  ||||||||| | | |    
T  13509461 taggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcccct 13509362  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||  |||| ||||||||| |||||||||    
T  13509361 ttgcacctttgctccttttggccaattttga 13509331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 184
Target Start/End: Complemental strand, 52491680 - 52491549
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    |||||||||||||||||||||| ||||||  ||||  ||||||||||||  |||  ||| ||||| | |  |||||  |||  |||||||||||||||||    
T  52491680 tttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagccccattgcaactttaatccttttggtcaatttt 52491581  T
Q  151 gaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||   |||||||||||| ||||  ||||||||||    
T  52491580 gacaggtcaatgcctacgtggc--gccacgtgtg 52491549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 55602379 - 55602452
Alignment:
Q  27 taaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttta 100  Q
    |||| |||| |||||||||  || |||||||||||||||||||| | ||||||| || || |||||||||||||    
T  55602379 taaagtgcatttttcccctttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaatttta 55602452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 8155741 - 8155866
Alignment:
Q  27 taaattgcacttttcccctcgaagtttcaaaaacttgcaattttggc-cctctatgtacaataactacaattttaaccctttaagatttaactcttttgc 125  Q
    |||| ||||||||||||| | || |||||||||||||||||||| || || ||| || ||| ||||||||||||  |||  ||||||||| |   |||||    
T  8155741 taaagtgcacttttcccc-ctaactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttgc 8155839  T
Q  126 atttttggtccttttggtcaattttga 152  Q
    || ||| ||| |||||||||| |||||    
T  8155840 atctttagtcattttggtcaactttga 8155866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 13386012 - 13386090
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaa-acttgcaattttggccctctatgtacaataactacaattt 98  Q
    ||||||||| ||||||||||||| || || |||||||| ||||||||||||||||| ||| |||| | ||| |||||||    
T  13386012 taggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 13386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 37727729 - 37727825
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagattta-actcttttgcatttttggtccttttggtcaattttga 152  Q
    ||||| ||| ||||||||| || ||| ||||| ||||||||||||||||| ||||||||||  ||| |||| || ||||||| |||| |||||||||||    
T  37727729 aaaaagttgtaattttggctct-tatatacaaaaactacaattttaaccccttaagatttagtctc-tttgtatctttggtcattttagtcaattttga 37727825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 5525359 - 5525488
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| | || |||||||| | || ||||||||||||||||||||| ||| ||| |||| | ||| |||||||   |||  ||||||||| | |  |    
T  5525359 aggctaaagtacatttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5525458  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||||  |||||||||||||  |||||||||    
T  5525459 tgcaactttggtccttttgaccaattttga 5525488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 14868889 - 14868941
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccc 75  Q
    |||||||| ||||||||||||| | |  |||||||| ||||||||||||||||    
T  14868889 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccc 14868941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 14877045 - 14876993
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccc 75  Q
    |||||||| ||||||||||||| | |  |||||||| ||||||||||||||||    
T  14877045 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccc 14876993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 21539140 - 21539068
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcat 127  Q
    ||||||||||||||||||||  ||| ||  || |||||||||||| ||||  ||||||||| ||| |||||||    
T  21539140 aaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgcat 21539068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 140
Target Start/End: Original strand, 50909297 - 50909388
Alignment:
Q  48 aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcctttt 140  Q
    |||||| ||||| ||||||||||| ||  |||| || || ||||||||||||||||   |||||||| | || ||||||| ||||||||||||    
T  50909297 aagttttaaaaagttgcaattttgacctcctatatataaaaactacaattttaacctcctaagattt-agtcatttgcatctttggtcctttt 50909388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 170
Target Start/End: Original strand, 18970920 - 18971057
Alignment:
Q  33 gcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttg 132  Q
    |||||||||||| | || |||||||| ||| |||||||||||| ||| |||||| |||||||||||| |||| | |||||||||| | ||||||  ||||    
T  18970920 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgcaactttg 18971019  T
Q  133 gtccttttggtcaattttgaactgtcaatgcctacatg 170  Q
    |||||||| | ||||||||| | |||||||||||||||    
T  18971020 gtcctttttgccaattttgaccggtcaatgcctacatg 18971057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 24122881 - 24123032
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| |||| |||||||| | || ||| ||||| ||||||||||| ||| ||| |||||| ||||| |||||||  ||  ||||||||| ||  |    
T  24122881 taggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagcttct 24122980  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggca 173  Q
    |||||| |||||||||||||||||||||||| | |||||||||||| |||||    
T  24122981 ttgcatctttggtccttttggtcaattttgaccggtcaatgcctacgtggca 24123032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 12353466 - 12353301
Alignment:
Q  18 aatataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaac 117  Q
    |||| |||||||| |||||||||||||   || ||||||||||||||||||||||||| ||| |||||| ||||| ||||||  |||  ||||||||| |    
T  12353466 aataaaggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacaa-aactataattttggccccctaagatttagc 12353368  T
Q  118 tcttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
     |  ||||| ||||  | ||||||||||||||||| | |||||||| |||||||| |||||||||||    
T  12353367 cccattgcaattttaattcttttggtcaattttgaccggtcaatgcttacatggcgtgccacgtgtg 12353301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 5513977 - 5514110
Alignment:
Q  19 atataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaact 118  Q
    |||||||||||| ||||||||| ||| | || |||||||||||| |||||||||||| ||| |||||| ||||||||||||  |||  ||| ||||| |     
T  5513977 atataggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcc 5514076  T
Q  119 cttttgcatttttggtccttttggtcaattttga 152  Q
    | ||||||| ||||||||||||| ||||||||||    
T  5514077 cctttgcatctttggtccttttgatcaattttga 5514110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 30336602 - 30336473
Alignment:
Q  24 ggctaaattgcactt-ttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||| |||||| | || ||||||||||||  |||||| |||  ||| |||||| |||||||||||||||||| ||||||||| |  |||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagccattt 30336503  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||||| ||||||||||||||||||||||||    
T  30336502 tgcatctttggtccttttggtcaattttga 30336473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 30570343 - 30570196
Alignment:
Q  36 cttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtc 135  Q
    ||||||||||| |||||| ||||| |||||||||||  ||| ||||||||| || || ||||||  |||  ||||||||| | ||||||||| |||||||    
T  30570343 cttttcccctctaagttttaaaaagttgcaattttgatcct-tatgtacaaaaattagaattttggccccctaagatttagcccttttgcatctttggtc 30570245  T
Q  136 cttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||| ||||||||| | ||||||| |||| ||||| ||||||||||    
T  30570244 cttttggccaattttgaccagtcaatgtctacgtggcacgccacgtgtg 30570196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 1824161 - 1824050
Alignment:
Q  41 cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcctttt 140  Q
    |||||| || |||||||||||||||||||||| || ||| |||||| ||||||||||||  |||  ||||||||| |  |||||||| ||||||||||||    
T  1824161 cccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatctttggtcctttt 1824062  T
Q  141 ggtcaattttga 152  Q
    ||||||||||||    
T  1824061 ggtcaattttga 1824050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 1858606 - 1858495
Alignment:
Q  41 cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcctttt 140  Q
    |||||| || |||||||||||||||||||||| || ||| |||||| ||||||||||||  |||  ||||||||| |  |||||||| ||||||||||||    
T  1858606 cccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatctttggtcctttt 1858507  T
Q  141 ggtcaattttga 152  Q
    ||||||||||||    
T  1858506 ggtcaattttga 1858495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 8389792 - 8389661
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    |||| |||| |||||||||||||||  |||||||||||| |||||||||||| ||  ||||||||| |||||||||||||  ||  ||||||||||| |     
T  8389792 taggttaaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaacccc 8389693  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    ||| |||||||||||||||||  |||||||||    
T  8389692 tttacatttttggtccttttgaacaattttga 8389661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 10006344 - 10006506
Alignment:
Q  24 ggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||  | ||| ||||||||  |||  ||||||||| | | ||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcccctt 10006443  T
Q  123 tgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| ||||||||||||||||||||||||  |  |||| |||||| ||||| ||||||||||    
T  10006444 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 10006506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 18978029 - 18978179
Alignment:
Q  33 gcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttg 132  Q
    |||||||||||| | || |||||||| ||| |||||||||||| ||| |||||| ||||||||||||  ||| |||||||||| | | ||||||  ||||    
T  18978029 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgcaactttg 18978128  T
Q  133 gtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgt 183  Q
     |||||||   |||||||||   |||||||||||| ||||| |||||||||    
T  18978129 atccttttttccaattttgacgggtcaatgcctacgtggcacgccacgtgt 18978179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 22220388 - 22220550
Alignment:
Q  24 ggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||||| || || ||| ||| ||||||||||||| ||| ||||||| || ||||||||||||  |||  ||||||||| | | ||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccatt 22220487  T
Q  123 tgcatttttggtccttttggtcaattttgaac-tgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| ||||||||||||| |||||||||| |  ||||||||  |  ||||||||||||||||    
T  22220488 tgcatctttggtccttttgatcaattttgagcaagtcaatgctgatttggcatgccacgtgtg 22220550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 30335671 - 30335768
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    ||||||||||||||||||| | ||| |||||| || ||||||||||||||  ||||||||| | | ||||||| ||||||||||||| ||||||||||    
T  30335671 aaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcccctttgcatctttggtccttttgttcaattttga 30335768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 30568885 - 30569046
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| |||||||| |||||| |||||||||||| || ||||||||  |   || |||||| ||||| |||||| | ||  ||||||||| | | |    
T  30568885 taggctaaagtgcactttccccctctaagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagcccct 30568984  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgt 183  Q
    |||||| |||||||||||||| ||||| ||| | ||||||| |||| ||||| |||||||||    
T  30568985 ttgcatctttggtccttttggccaattgtgaccagtcaatgtctacgtggcacgccacgtgt 30569046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 178
Target Start/End: Complemental strand, 18488331 - 18488208
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaac 154  Q
    ||||| |||||||||| | || |||| ||||| ||||||||||||  |||| |||||| |||| | ||||||| |||||||||||||  || |||||| |    
T  18488331 aaaaagttgcaattttagtcccctatatacaaaaactacaattttggccctctaagatataacccctttgcatctttggtccttttgaccagttttgacc 18488232  T
Q  155 tgtcaatgcctacatggcatgcca 178  Q
     |||||||||||| ||||||||||    
T  18488231 agtcaatgcctacgtggcatgcca 18488208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 2380023 - 2379896
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| |  |||||||||| | || ||||||||| ||| ||||||||||| |||||||| | ||||||||||||  ||| |||||||||| ||| |    
T  2380023 taggctaaagtttacttttcccc-ctaactttcaaaaagttgtaattttggccc-ctatgtacga-aactacaattttggccccttaagatttagctcat 2379927  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||| |||||| |||||||||||||||||    
T  2379926 ttgcatctttggttcttttggtcaattttga 2379896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 10007868 - 10007702
Alignment:
Q  20 tataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaact 118  Q
    ||||||||||| ||||||||||||| |  || ||||||||||||||||||||||||| ||| ||| |  ||| ||||||||   ||  ||||||||| |     
T  10007868 tataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcc 10007769  T
Q  119 cttttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    | ||||||| |||||||||||| |||||||||||  |  |||| |||||| ||||| ||||||||||    
T  10007768 cctttgcatctttggtccttttcgtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 10007702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 8388463 - 8388591
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| |||||||| |||| | || ||| ||||| |||||||||| |||| |||||||||| ||||| ||||||  |||  ||||||||| | | ||    
T  8388463 aggctaaagtgcactttccccc-ctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctt 8388561  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||| |||||||||||||||  |||||||||    
T  8388562 tgcgtttttggtccttttgcccaattttga 8388591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 11287808 - 11287937
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaac 154  Q
    ||||||||||||||||||||| ||| |||||  ||||||||||||  |||  ||||| ||||||| |||||| ||||| || ||||  |||||||||| |    
T  11287808 aaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgcaattttgatcatttttatcaattttgacc 11287907  T
Q  155 tgtcaatgcctacatggcatgccacgtgtg 184  Q
     ||||| |||||   |||||||||| ||||    
T  11287908 ggtcaacgcctatgcggcatgccacatgtg 11287937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 24123971 - 24123870
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||||||||||||||||||   || |||| | || |||||||||| ||   ||||||||| | | ||||||| ||||||||||||||||||||||    
T  24123971 tttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgcatctttggtccttttggtcaatttt 24123872  T
Q  151 ga 152  Q
    ||    
T  24123871 ga 24123870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 147
Target Start/End: Complemental strand, 32207425 - 32207302
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| |||||||| |||| | ||  |||||||||||||||||||| | | ||| |||||| ||||||||||||  ||  |||||||||| |   ||    
T  32207425 aggctaaagtgcactttccccc-ctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctt 32207327  T
Q  123 tgcatttttggtccttttggtcaat 147  Q
    ||||| |||||||||||||||||||    
T  32207326 tgcatctttggtccttttggtcaat 32207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 17844276 - 17844435
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| |||||||| |||  | |||||||||||| |||  ||||||| |||  |||||||| ||||||||||||   || | || |||||||   |    
T  17844276 taggctaaagtgcactttcccctccaaagtttcaaaaagttgtgattttggtcct--atgtacaaaaactacaattttggtccct-aacatttaacctct 17844372  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||  || |||||||||||||| ||||||||| | |||||||||||||||||| | ||||||||    
T  17844373 ttatatctttggtccttttggccaattttgatcggtcaatgcctacatggcacgtcacgtgtg 17844435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 1823584 - 1823682
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgca-tttttggtccttttggtcaattttga 152  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||    ||  ||||||||| | | |||||| |||||||||||||||| |||||||||    
T  1823584 aaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatttgcattttttggtccttttggccaattttga 1823682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 1858029 - 1858127
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgca-tttttggtccttttggtcaattttga 152  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||    ||  ||||||||| | | |||||| |||||||||||||||| |||||||||    
T  1858029 aaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatttgcattttttggtccttttggccaattttga 1858127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 18979220 - 18979074
Alignment:
Q  25 gctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctttt 123  Q
    |||||| ||||||||||||| |  || |||||| |||||||||||||||||| |||  || || ||||||||||||  ||| ||| |||||| | | |||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccattt 18979121  T
Q  124 gcatttttggtccttttggtcaattttgaactgtcaatgcctacatg 170  Q
    |||  |||| ||||||| | |||||||||   |||||||||||||||    
T  18979120 gcaactttgatcctttttgccaattttgacaggtcaatgcctacatg 18979074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 22221466 - 22221336
Alignment:
Q  23 aggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||||| || | || ||||||||||||||||||||| ||| ||| |||  | |||||||||||| ||||  ||||||||| | | |    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 22221367  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    || ||| |||| ||||||| | |||||||||    
T  22221366 ttacatctttgatccttttagccaattttga 22221336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 22227808 - 22227678
Alignment:
Q  23 aggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||||| || | || ||||||||||||||||||||| ||| ||| |||  | |||||||||||| ||||  ||||||||| | | |    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 22227709  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    || ||| |||| ||||||| | |||||||||    
T  22227708 ttacatctttgatccttttagccaattttga 22227678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 11282040 - 11282137
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    ||||| ||||||||||||||| |||| ||||| ||  |||||||| ||||  ||||||||||| | |||||| ||||| || ||||| ||||||||||    
T  11282040 aaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgcaattttgatctttttgatcaattttga 11282137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 45114629 - 45114457
Alignment:
Q  12 taatagaatataggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaag 110  Q
    |||||||| | ||||| || ||||||||||| || | || ||||||||||||||||||||||  | |||||||||  ||||||||||||   ||| ||||    
T  45114629 taatagaacaaaggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaatttt-ggcctctaag 45114531  T
Q  111 atttaactcttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||||    |||||  |||  || ||||||| |||||||| | |||||||||||| |||||  |||||||||    
T  45114530 atttaacctcattgcaactttaatcattttggttaattttgaccggtcaatgcctacgtggcacaccacgtgtg 45114457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 24361251 - 24361166
Alignment:
Q  66 attttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||||||| | | ||||||||||| ||  ||||  ||||||||||    
T  24361251 attttggtcctctatgtacaaaaattacaattttaatcctttaagatttagc-catttgcatttttagttttttttatcaattttga 24361166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 29968434 - 29968364
Alignment:
Q  27 taaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatt 97  Q
    |||| |||||||||||||   || ||| ||||||||||||||||||||| ||| |||||| ||||||||||    
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatt 29968364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 40471189 - 40471119
Alignment:
Q  82 tacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    ||||| ||||||||||||| ||| ||||||||||||   |||| || ||||||| ||||||||||||||||    
T  40471189 tacaaaaactacaattttagccccttaagatttaacctctttgtatctttggtcattttggtcaattttga 40471119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 12351949 - 12352082
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||| ||||||||||| ||| ||| |||||| |||||||||||| ||||  ||||||||| |    ||||| ||||   |||||||| |||||||    
T  12351949 tttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcctcattgcaattttaacccttttggacaatttt 12352048  T
Q  151 gaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || | |||||||| ||  |||| || ||||||||    
T  12352049 gaccggtcaatgcatatgtggcgtgtcacgtgtg 12352082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 24359808 - 24359936
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| ||| ||||| ||||| || ||| ||||| |||| ||||| ||| ||||| ||||| |||||||||||| ||||  ||||||||| |   ||    
T  24359808 aggctaaagtgctctttttccctctaacttttaaaaagttgcgatttttgcc-tctatatacaaaaactacaattttgaccccctaagatttagcctatt 24359906  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||||| ||| |||  |||||||||||||||    
T  24359907 tgcatctttagtcactttggtcaattttga 24359936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 29043427 - 29043536
Alignment:
Q  52 ttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttg 151  Q
    |||||||| | || |||||| ||| |||||||||| ||||||||||||  |||| ||||||||| | | |||| || |||| ||||||| | ||||||||    
T  29043427 ttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaattttttccctctaagatttagcccctttgtatctttgatccttttagacaattttg 29043526  T
Q  152 aactgtcaat 161  Q
    | | ||||||    
T  29043527 accagtcaat 29043536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 43661896 - 43661795
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||| ||||||||||   ||||||||||||| ||||| ||||||  |||  ||||||||  | |  |||||| ||||||||||||| ||||||||    
T  43661896 tttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagatttcgcccaattgcatctttggtccttttgatcaatttt 43661797  T
Q  151 ga 152  Q
    ||    
T  43661796 ga 43661795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 24483143 - 24483195
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccc 75  Q
    ||||||| |||||||||||||||  || |||||||||||||||||||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccc 24483195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 43661297 - 43661427
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaac 154  Q
    ||||| || ||||||||| ||  ||||||||| ||||| ||||||  |||  ||||||||| | | ||||||| |||||| ||||||||||| ||||| |    
T  43661297 aaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttgcatctttggttcttttggtcaactttgacc 43661396  T
Q  155 -tgtcaatgcctacatggcatgccacgtgtg 184  Q
      ||||| || ||  ||||||||||||||||    
T  43661397 aagtcaacgcatatgtggcatgccacgtgtg 43661427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 5514372 - 5514295
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||| |||||||||  || | || ||| |||||||||||||||| ||| ||||  ||||| ||||||||||||    
T  5514372 taggctaaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaatttt 5514295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 11456636 - 11456696
Alignment:
Q  22 taggctaaattgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctatg 81  Q
    ||||||||| |||||||||| ||| | || ||||||||| ||||||||||||||| |||||    
T  11456636 taggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggccccctatg 11456696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 7501955 - 7501791
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||  | ||| ||||||||  ||| ||||||| || | |     
T  7501955 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccc 7501856  T
Q  121 tttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||| ||||||||||||||||||||||||  |  ||||||||||| ||||| ||||||||||    
T  7501855 tttgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggcaggccacgtgtg 7501791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 18371424 - 18371553
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| |||||||||||||||  || |||||||||||||||||||||||||  || |||||| ||||||||||||  |||  ||||||||| | | ||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcacatt 18371523  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||||| |||| |||||||||||||||||||    
T  18371524 tgcatctttgatccttttggtcaattttga 18371553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 18372544 - 18372429
Alignment:
Q  37 ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcc 136  Q
    |||||||| | || ||||||||||||||||||||||||| ||| |||||| ||||||||||||  |||  ||||||||| | | |||| || ||||||||    
T  18372544 ttttcccccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatctttggtcc 18372445  T
Q  137 ttttggtcaattttga 152  Q
    ||||||||||||||||    
T  18372444 ttttggtcaattttga 18372429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 21505413 - 21505542
Alignment:
Q  21 ataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    |||||||||| ||||||||||||| | || ||||||||| |||| |||||||||| | || ||||| |||||||||||| ||||  ||||||||| | |     
T  21505413 ataggctaaagtgcacttttcccc-ctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccc 21505511  T
Q  121 tttgcatttttggtccttttggtcaattttg 151  Q
    ||||||| |||||||||||||| ||||||||    
T  21505512 tttgcatctttggtccttttggacaattttg 21505542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 42886389 - 42886226
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    |||| |||| |||||||||| ||||  || ||||||||| ||||||||||| ||| |||  ||||| ||||||||||||| |||  ||||||||| | |     
T  42886389 taggttaaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagccca 42886290  T
Q  121 tttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||| |||| || |||||||||||||||| |  |||||| |||  ||||||||||||||||    
T  42886289 tttgcatctttgatcattttggtcaattttgaccgatcaatgtctatgtggcatgccacgtgtg 42886226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 22629514 - 22629648
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||||||| ||||||||||  ||| |||||| ||||||||||||  |||  ||||||||| | | ||||||| ||||||||||||||||||||||    
T  22629514 tttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 22629613  T
Q  151 gaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||  |  |||| |||||| |||| |||||||||||    
T  22629614 gacttattcaacgcctacgtggcctgccacgtgtg 22629648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 22630555 - 22630424
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||  |  || ||||||||||||||||||||||||| |||  ||||| ||||||||||||| |||  ||||||| | |       
T  22630555 taggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctc 22630456  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    |||| || ||||||||||||||||||||||||    
T  22630455 tttgtatctttggtccttttggtcaattttga 22630424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 11658373 - 11658455
Alignment:
Q  18 aatataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||||||||||||||||||||| |  || |||||||||| ||||||||| |||| |||||||||| ||||||||||||    
T  11658373 aatataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaatttt 11658455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 178
Target Start/End: Complemental strand, 14999246 - 14999101
Alignment:
Q  32 tgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcattttt 131  Q
    ||||||||||||| | || |||||||| |||||||||||| ||| |||  ||||| ||||||||||||  | |  ||||||||| | | ||||||| |||    
T  14999246 tgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcatcttt 14999148  T
Q  132 ggtccttttggtcaattttgaactgtcaatgcctacatggcatgcca 178  Q
    | |||||| |||||||||||| | |||||||| ||| ||||||||||    
T  14999147 gttcctttaggtcaattttgaccggtcaatgcttacgtggcatgcca 14999101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 46482625 - 46482759
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||| ||| || |||| ||| |||||||||| ||||| |||||||| ||  ||||||||| ||| |||||||||||  |||||||||||||||||    
T  46482625 tttcaaaaatttgtaaatttgaccccctatgtacaaaaactataattttaatcccctaagatttatctcctttgcattttttatccttttggtcaatttt 46482724  T
Q  151 gaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||  |  ||||||||||| ||||| |||| |||||    
T  46482725 gacttattcaatgcctacgtggcaagccatgtgtg 46482759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 7500454 - 7500583
Alignment:
Q  23 aggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    |||||||| |||||||||||||   || |||||||||||||||||||||  |||||| ||| |  ||| ||||||||  |||  ||||||||| | | ||    
T  7500454 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccctt 7500553  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||||| |||| |||||||||||||||||||    
T  7500554 tgcatctttgatccttttggtcaattttga 7500583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 14998064 - 14998140
Alignment:
Q  107 taagatttaactcttttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||||| | | ||||||| |||||||||||||||||||||| | | |||||||||||||| ||||||||||||||    
T  14998064 taagatttagcccctttgcatctttggtccttttggtcaattttaatcggtcaatgcctacat-gcatgccacgtgtg 14998140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 31659622 - 31659785
Alignment:
Q  24 ggctaaattgcactttt--cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||| |||||||||  |||| | || |||||||||||| |||||||| ||| ||| |||||| ||||||||||||  |||  ||||||||| | |      
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccca 31659721  T
Q  122 ttgcatttttggtccttttggtcaattttga-actgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||| ||||||||||||||||||| |  ||||| || | | ||||||||||||||||    
T  31659722 ttgcaaatttgatccttttggtcaattttgacatagtcaacgcatgcgtggcatgccacgtgtg 31659785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 152
Target Start/End: Original strand, 3227109 - 3227236
Alignment:
Q  25 gctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttg 124  Q
    |||||| |||||||| |||| | || ||||||||||||||||||||||||| ||| |||| | ||| |||||||   ||| |||||||||| | |  |||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagatttagccccattg 3227208  T
Q  125 catttttggtccttttggtcaattttga 152  Q
    ||  |||||||||||||  |||||||||    
T  3227209 caactttggtccttttgaacaattttga 3227236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 17782658 - 17782579
Alignment:
Q  20 tataggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattt 98  Q
    ||||||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||| | ||| |||||||    
T  17782658 tataggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 17782579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 31949320 - 31949451
Alignment:
Q  22 taggctaaattgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| |||||||||||| | | || ||||||||||||||||||||||||| ||| |||| | ||| |||||||   |||  ||||||||| | |     
T  31949320 taggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 31949419  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
     |||||  ||||||||||||| ||||||||||    
T  31949420 attgcaactttggtccttttgatcaattttga 31949451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 127335 - 127464
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| ||||||||||||| | || |||||||||||||||||||||| || ||| |||| | ||| |||| |||| |||  ||||||||| | |      
T  127335 taggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaa-tttagccccctaagatttagcccaa 127433  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||  |||||||||||||  |||||||||    
T  127434 ttgcaactttggtccttttgaccaattttga 127464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 34351520 - 34351584
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagattta 115  Q
    ||||||||||||||||||||||| ||| | ||| |  ||||||||||||||||| ||||||||||    
T  34351520 tttcaaaaacttgcaattttggctctccaagtatagaaactacaattttaaccccttaagattta 34351584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 3227697 - 3227566
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| |  || ||||||||||||||||||||||||| ||| |||| | ||| |||||||    ||  ||||||||| | |     
T  3227697 taggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagcccc 3227598  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
     |||||  ||||||||||||| ||||||||||    
T  3227597 attgcaactttggtccttttgatcaattttga 3227566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 34352888 - 34352726
Alignment:
Q  23 aggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||| | |||| || |||||||||||| | ||||||| ||  || |||||  ||||| ||||||  |||| |||||||||||  |     
T  34352888 aggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccctctaagatttaacctta 34352789  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||  || |||||| ||||||||| | |||||||||||| || || ||||||||||    
T  34352788 ttgcaactttaatcattttggccaattttgaccggtcaatgcctacgtgacacgccacgtgtg 34352726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  23 aggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaa 95  Q
    |||||||| ||||||| ||| || | || ||||||||||||||||||||||| | |||||||||| ||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 47369809 - 47369910
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    |||||||||||||||||||| |||   || |||||| ||||| ||||||  ||| |||||||||| | | ||||||| ||| ||  ||||||||||||||    
T  47369809 tttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctttgcatctttagttattttggtcaatttt 47369908  T
Q  151 ga 152  Q
    ||    
T  47369909 ga 47369910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 11662624 - 11662576
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    |||||||||||||||||||| || |||||||||||| ||||| ||||||    
T  11662624 tttcaaaaacttgcaattttagctctctatgtacaaaaactataatttt 11662576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 17781663 - 17781790
Alignment:
Q  26 ctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttg 124  Q
    ||||| ||||||||||||| |  || ||||||||||||||||||||| ||| ||| |||| | ||| ||||||| | |||  ||||||||| | |  |||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattg 17781762  T
Q  125 catttttggtccttttggtcaattttga 152  Q
    ||  |||||||||||||  |||||||||    
T  17781763 caactttggtccttttgaccaattttga 17781790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 34174085 - 34174010
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatt 97  Q
    ||||||||| ||||||||||||| | |  |||||||| |||||||||||||||| ||| |||| | ||| ||||||    
T  34174085 taggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 31661111 - 31661033
Alignment:
Q  23 aggctaaattgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttta 100  Q
    |||||||| |||||||| ||| ||| || ||||||||| ||||||||||| |||| || |||||| ||||| |||||||    
T  31661111 aggctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataatttta 31661033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 47524533 - 47524599
Alignment:
Q  32 tgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatt 97  Q
    ||||||||||||| || || ||||||||||||||||||||||||| ||| |||| | ||| ||||||    
T  47524533 tgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 184
Target Start/End: Complemental strand, 47525468 - 47525306
Alignment:
Q  24 ggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||| |||| ||| |||  | ||| |||||||   |||  ||||||||| | |  |    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagccccat 47525369  T
Q  123 tgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||  |||||||||||||  ||||||||| || ||||| ||  | |||||||||||| ||||    
T  47525368 tgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 47525306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 48934976 - 48934928
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaatttt 99  Q
    ||||||||||||| ||||||| ||||||| |||||| ||||| ||||||    
T  48934976 tttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaatttt 48934928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 1436 - 1568
Alignment:
Q  21 ataggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    |||||||||| || |||||||||| || || ||| ||||||||||||||||| ||| ||||||| || ||||| |||||| ||||  ||||||||| | |    
T  1436 ataggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagccc 1535  T
Q  120 ttttgcatttttggtccttttggtcaattttga 152  Q
     ||||||| ||||||||||||||||||||||||    
T  1536 atttgcatctttggtccttttggtcaattttga 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 3333128 - 3333005
Alignment:
Q  23 aggctaaattgcacttttcccct-cgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||||||||||||||||| | |||||| ||||| |||| |||||||||| |||||||||| |||||||||||||||||| ||| ||||| | | |    
T  3333128 aggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaatttagcccct 3333029  T
Q  122 ttgcatttttggtccttttggtca 145  Q
    |||||  |||| ||||||| ||||    
T  3333028 ttgcaactttgatccttttagtca 3333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 1829672 - 1829543
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaac 154  Q
    ||||||||||||||||| ||| ||| ||| || ||||||||||||  |||  ||||||||| | | ||||||| ||||||| |||||||||||||||| |    
T  1829672 aaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgcatctttggtcattttggtcaattttgacc 1829573  T
Q  155 tgtcaatgcctacatggcatgccacgtgtg 184  Q
     |||||||||||| |||||  |||||||||    
T  1829572 ggtcaatgcctacgtggcacaccacgtgtg 1829543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 16704600 - 16704440
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||| | |  || ||||||||||||||||||||| ||| ||| |||||| |||||||||||| | ||||||||||||| |       
T  16704600 taggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctc 16704501  T
Q  121 tttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgt 181  Q
    ||||||  | || ||||||| |||||||||||   |||||||||||| ||| |||||||||    
T  16704500 tttgcaactatgatcctttttgtcaattttgattggtcaatgcctacgtggtatgccacgt 16704440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 7314880 - 7315041
Alignment:
Q  24 ggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||  | ||| |||||||| ||||  ||||||||| | | ||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccc-ctaagtatcaaaacaacaattttgaccccctaagatttagcccctt 7314978  T
Q  123 tgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||| ||||||| ||||||||||||||||  |  |||| |||||| ||||| ||||||||||    
T  7314979 tgcatctttggtcattttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 7315041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 26575140 - 26574999
Alignment:
Q  38 tttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcct 137  Q
    ||||| ||| || ||||||||||||||||||||  |||  || |||||| ||||||||||||  |||  ||||||||||||| ||||||  |||| ||||    
T  26575140 tttcctctctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgcaactttgatcct 26575041  T
Q  138 tttggtcaattttgaactgtcaatgcctacatggcatgccac 179  Q
    ||| | ||||||||| | ||||||| |||| |||||||||||    
T  26575040 ttttgccaattttgaccggtcaatgtctacgtggcatgccac 26574999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 6842386 - 6842255
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| || |||||||||||| ||||||||||||||| |||||| ||| |||||||||||||   | |||| |||| | |||    
T  6842386 taggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaattttagttccttaaaattt-agtct 6842288  T
Q  121 -tttgcatttttggtccttttggtcaattttga 152  Q
     ||||||| |||| ||||||||| |||||||||    
T  6842287 gtttgcatctttgatccttttggccaattttga 6842255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 10786000 - 10785853
Alignment:
Q  37 ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtcc 136  Q
    |||||||| | || ||| ||||| ||||||||||  ||| ||| |||||| ||||||||||||||||| |||||||||| | | ||||||  |||| |||    
T  10786000 ttttcccccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgcaactttgatcc 10785901  T
Q  137 ttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||   |||||||||   |||||||| ||||||||| ||||||||||    
T  10785900 tttttaccaattttgactagtcaatgcatacatggcacgccacgtgtg 10785853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 7316398 - 7316233
Alignment:
Q  21 ataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    |||||||||| ||||||||||||| |  || ||||||||||||||||||||||||| |||  ||    ||| ||||||||  ||| |||||||||| | |    
T  7316398 ataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagccc 7316299  T
Q  120 ttttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
     ||||||| | ||||||||||||||||||||||  |  |||| |||||| ||||| ||||||||||    
T  7316298 ctttgcatctatggtccttttggtcaattttgacttattcaacgcctacgtggcaagccacgtgtg 7316233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 27437825 - 27437957
Alignment:
Q  21 ataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    |||||||||| |||||||||| || |  || ||| ||||| ||||||||||||||| ||||  | || |||||||||||| ||||  ||||||||| |||    
T  27437825 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctc 27437924  T
Q  120 ttttgcatttttggtccttttggtcaattttga 152  Q
     ||||||  |||||||||||||| |||||||||    
T  27437925 ctttgcaactttggtccttttggccaattttga 27437957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 8659263 - 8659427
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||| | ||| |||||||   |||  ||||||||| | |     
T  8659263 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 8659362  T
Q  121 tttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
     |||||  |||||||||||||  ||||||||| || ||||| ||  | |||||||||||| ||||    
T  8659363 attgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 8659427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 8821871 - 8821991
Alignment:
Q  22 taggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| || || ||||||||||||||||||||||||| ||| |||| | ||| |||||||   |||  ||||||||| |||     
T  8821871 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagctcc 8821970  T
Q  121 tttgcatttttggtccttttg 141  Q
     |||||  |||||||||||||    
T  8821971 attgcaactttggtccttttg 8821991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 3721611 - 3721774
Alignment:
Q  23 aggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| ||||||||||||| || || ||||||||||||||||||||| ||| ||| |||| | ||| | |||||  |||| |||||||||| | |      
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagcccca 3721710  T
Q  122 ttgcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||||||||||||  ||||||||| || ||||| ||  | |||||||||||| ||||    
T  3721711 ttgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 3721774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 184
Target Start/End: Complemental strand, 26949255 - 26949125
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||| ||||||||||| ||||  | ||| || |||||||||||||| | | ||||||||||| | ||||||| ||| ||  ||||| ||||||||    
T  26949255 tttcaaaaa-ttgcaattttgcccct--aagtataaaaactacaattttaatcttctaagatttaacccctttgcatctttagtgtttttgatcaatttt 26949159  T
Q  151 gaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || | |||||||||| ||||||| ||||| ||||    
T  26949158 gaccagtcaatgccttcatggcacgccacatgtg 26949125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 6840192 - 6840319
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||| || |||||||| |||||  |||||||||||| |||| ||||||||||  ||  ||||| ||||| |||||| ||||| ||||||||||  | |    
T  6840192 taggctgaagtgcactttccccctt-aagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttgaccctctaagatttaatccct 6840290  T
Q  122 ttgcatttttggtccttttggtcaatttt 150  Q
    |||||| |||| ||||||||  |||||||    
T  6840291 ttgcatctttgatccttttgaccaatttt 6840319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 152
Target Start/End: Complemental strand, 27322172 - 27322040
Alignment:
Q  20 tataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    ||||||||||| ||||||||||||| | |  |||||||| |||||||||||||||| ||| |||| | ||| ||||||||  |||  ||||| ||| | |    
T  27322172 tataggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagccc 27322073  T
Q  120 ttttgcatttttggtccttttggtcaattttga 152  Q
     ||||| | ||| ||||||||| || |||||||    
T  27322072 ctttgcttatttcgtccttttgctctattttga 27322040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 5658810 - 5658885
Alignment:
Q  77 ctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 152  Q
    |||||||||| |||||||||||| | || |||||||||| | | ||||||  |||| |||||||||||||||||||    
T  5658810 ctatgtacaaaaactacaattttgatcccttaagatttagcccatttgcaactttgatccttttggtcaattttga 5658885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 26574617 - 26574747
Alignment:
Q  22 taggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| |||| ||| || |||| || |||||||||||||||||||||  |||||| |||||| |||||| ||||| | || |||||||||| | |     
T  26574617 taggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactac-attttgatcccttaagatttagcccc 26574715  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    ||||||  |||| || |||| |||||||||||    
T  26574716 tttgcaactttgatcttttttgtcaattttga 26574747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 3722610 - 3722533
Alignment:
Q  22 taggctaaattgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattt 98  Q
    ||||||||| |||||||||||| | | || ||||||||||||||||||||| ||||||| |||| | ||| |||||||    
T  3722610 taggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 29473085 - 29473238
Alignment:
Q  32 tgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttt 130  Q
    ||||||||||||| |  |||||| ||||| ||||||||||||  | ||||| |||| ||  ||||||||  ||||  |||| ||  | | |||||| |||    
T  29473085 tgcacttttccccccttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccctccaagaattggcccctttgcaattt 29473184  T
Q  131 tggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || ||||||| ||||||||| | | |||||||||||| ||||||||||| ||||    
T  29473185 tgatcctttttgtcaatttttaccggtcaatgcctacgtggcatgccacatgtg 29473238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 14823563 - 14823515
Alignment:
Q  136 cttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    ||||||||||||||||| | |||||||||||| ||||| ||||||||||    
T  14823563 cttttggtcaattttgaccggtcaatgcctacgtggcacgccacgtgtg 14823515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 8660305 - 8660176
Alignment:
Q  23 aggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    |||||||| |||||||||||||||  || ||||||||||||||||||||| ||| ||| |||| | ||| |||||||   |||  ||||||||| |||      
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgaccc-ctaagtaccaaaaccacaatttagcccccctaagatttagctcca 8660207  T
Q  122 ttgcatttttggtccttttggtcaattttga 152  Q
    |||||  |||| ||||||||  |||||||||    
T  8660206 ttgcaactttgatccttttgaccaattttga 8660176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 12350832 - 12350889
Alignment:
Q  57 aaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagattta 115  Q
    ||||||||||||||| ||| ||||||| || |||||||||||||||||  |||||||||    
T  12350832 aaacttgcaattttgaccc-ctatgtataaaaactacaattttaaccccctaagattta 12350889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 12382811 - 12382650
Alignment:
Q  25 gctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctttt 123  Q
    |||||| ||||||||||| |||| || ||| ||||| ||| ||||||| ||| ||| |||  | ||||| |||||| | ||   |||||||||| |||||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagatttaaccctttt 12382712  T
Q  124 gcatttttggtccttttggtcaattttgaact-gtcaatgcctacatggcatgccacgtgtg 184  Q
    |||| |||||||||||| |  ||||||||  | ||||| || ||  ||||||||||||||||    
T  12382711 gcatctttggtccttttagctaattttgacttggtcaacgcttatttggcatgccacgtgtg 12382650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 4597712 - 4597652
Alignment:
Q  21 ataggctaaattgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctat 80  Q
    |||||||||| | |||||||| ||||| |||||||||||  ||||||||||||||| ||||    
T  4597712 ataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctat 4597652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 60090 - 60219
Alignment:
Q  24 ggctaaattgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||||| |||| || ||| ||||||||||||||||| ||| ||||||| || |||||||||||| ||||  || |||||| | | ||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccctt 60189  T
Q  123 tgcatttttggtccttttggtcaattttga 152  Q
    ||||| ||||||| ||||||||||||||||    
T  60190 tgcatctttggtctttttggtcaattttga 60219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 61532 - 61431
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    |||||||||||||||||||| |||| ||| |||||| ||||| ||||||  |||  || |||||| | ||||||||| ||||||||||||||||||||||    
T  61532 tttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagcccttttgcatctttggtccttttggtcaatttt 61433  T
Q  151 ga 152  Q
    ||    
T  61432 ga 61431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 19486 - 19617
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| |||| |||||||| |  || |||||||| |||||||||||||||| ||| ||| || |||||||||||| | ||  ||||||||||| |     
T  19486 taggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccc 19585  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
    ||||||| |||| || ||||||||||||||||    
T  19586 tttgcatctttgatcattttggtcaattttga 19617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 49537 - 49405
Alignment:
Q  21 ataggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactc 119  Q
    |||||||||| |||||||||| || |  || ||| ||||| ||||||||||||||| ||||  | || |||||||||||| ||||  ||||||||| |||    
T  49537 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctc 49438  T
Q  120 ttttgcatttttggtccttttggtcaattttga 152  Q
     ||||||  |||||||||||||| |||||||||    
T  49437 ctttgcaactttggtccttttggccaattttga 49405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 141
Target Start/End: Original strand, 6368 - 6461
Alignment:
Q  48 aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttg 141  Q
    |||||||||||| || | ||||| |||| |||||||||| |||||||||||| ||||  ||||||||| |  |||||||| |||||||||||||    
T  6368 aagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagcctttttgcatctttggtccttttg 6461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 17468 - 17627
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||| ||| |  || ||| ||||||||||||||||||||| ||| |||||| ||||||||||||  |||   |||| ||| | |     
T  17468 taggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccc 17567  T
Q  121 tttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacg 180  Q
    |||||| ||| | || ||||   ||||||||| | |||||||||||| ||||||||||||    
T  17568 tttgcaatttcgatcttttttaccaattttgaccggtcaatgcctacgtggcatgccacg 17627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 18877 - 18727
Alignment:
Q  24 ggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttt 122  Q
    ||||||| ||||||||| |||||  || ||| ||||| |||||||||||| || ||| |||||| ||||| ||||||  ||| |||| ||||| | |  |    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagccccat 18778  T
Q  123 tgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggca 173  Q
    ||||  |||  || |||||||||||||||| | |||||||||||| |||||    
T  18777 tgcaactttaatcattttggtcaattttgaccggtcaatgcctacgtggca 18727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 5541 - 5410
Alignment:
Q  22 taggctaaattgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactct 120  Q
    ||||||||| ||||||||||||| |  || ||||||||||||||||||||| |||  || |||||| ||||||||||||  ||| |||||||||| | |     
T  5541 taggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcccc 5442  T
Q  121 tttgcatttttggtccttttggtcaattttga 152  Q
     || ||  |||| |||||||||| ||||||||    
T  5441 attacaaatttgatccttttggttaattttga 5410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 261 - 394
Alignment:
Q  51 tttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 150  Q
    ||||||||| |||||||||||| || |||||||||| ||||| ||||||   ||  ||||| ||| | | ||||||| |||| |||||||   |||||||    
T  261 tttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccctttgcatatttgatcctttttcccaatttt 360  T
Q  151 gaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    || | ||||| |||||  ||||||||||||||||    
T  361 gaccggtcaacgcctatgtggcatgccacgtgtg 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 184
Target Start/End: Complemental strand, 1047 - 918
Alignment:
Q  55 aaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgaac 154  Q
    ||||| |||||||||||| ||  ||||||||| ||||| ||||||  |||   |||| ||| | | ||||||| ||||||||||||   ||||||||| |    
T  1047 aaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccccaagaattagcccctttgcatatttggtcctttttcccaattttgacc 948  T
Q  155 tgtcaatgcctacatggcatgccacgtgtg 184  Q
     ||||| || ||| ||||||||||||||||    
T  947 ggtcaacgcttacgtggcatgccacgtgtg 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 13182 - 13305
Alignment:
Q  13 aatagaatataggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagat 112  Q
    |||| |||| |||||||| ||||||||||||| | || ||| ||||| |||  |||||| ||  |||||||| | ||||||||||||   ||  ||||||    
T  13182 aataaaataaaggctaaagtgcacttttcccc-ctaactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttttgtcccctaagat 13280  T
Q  113 ttaactcttttgcatttttggtcct 137  Q
    ||||||||||||||| |||||||||    
T  13281 ttaactcttttgcatatttggtcct 13305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 3410 - 3248
Alignment:
Q  22 taggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctttaagatttaactctt 121  Q
    ||||||||| ||||||||||||| |  | |||||||||||| |||||||| |||  || |||||| ||||| ||||||   ||  ||||||||| | | |    
T  3410 taggctaaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccct 3311  T
Q  122 ttgcatttttggtccttttggtcaattttgaactgtcaatgcctacatggcatgccacgtgtg 184  Q
    |||||  |||| ||||||| | ||||||| |   |||||||||||| | ||||||||| ||||    
T  3310 ttgcaactttgatcctttttgccaatttttactggtcaatgcctacgtagcatgccacatgtg 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 7532 - 7394
Alignment:
Q  8 tgcttaatagaatataggctaaattgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaattttaaccctt 106  Q
    |||| |||| |||| |||||||| ||||||| ||||| || |||||| ||||| || | |||||| ||| |||||||||  |||||||||||| ||||      
T  7532 tgctcaataaaataaaggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccc 7433  T
Q  107 taagatttaactcttttgcatttttggtccttttggtca 145  Q
    ||||||||| | | ||||||  |||| ||||||| ||||    
T  7432 taagatttagcccctttgcaactttgatccttttagtca 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 7538 - 7614
Alignment:
Q  24 ggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaataactacaatttta 100  Q
    ||||||| |||||||| |||||  |||||| ||||| ||| || |||| ||| ||||| |||| |||||||||||||    
T  7538 ggctaaagtgcactttccccctataagtttgaaaaagttgtaaatttgaccccctatgaacaaaaactacaatttta 7614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 23081 - 23140
Alignment:
Q  24 ggctaaattgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtac 84  Q
    ||||||| ||||||||||||| | || ||||||||||||||||||||| ||||||| ||||    
T  23081 ggctaaagtgcacttttcccc-ctaactttcaaaaacttgcaattttgtccctctaagtac 23140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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