View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4686-Insertion-9 (Length: 400)
Name: NF4686-Insertion-9
Description: NF4686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4686-Insertion-9 |
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Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 27 - 384
Target Start/End: Original strand, 33878949 - 33879310
Alignment:
| Q |
27 |
tgttagagagaggaagaagaaattcacaagtaatgcatattctatacactttccattgaaagatcaaacacttgtattgagctagaaaattactttatcc |
126 |
Q |
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| T |
33878949 |
tgttagagagaggaagaagaaattcacaagtaatgcatattctatacactttccattgaaagatcaaacacttgtattgagctagaaaattactttatcc |
33879048 |
T |
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| Q |
127 |
tctccgtaagagtaaacttgtagccacctaacaaccttttatttccttatttttgtaattcatcaaagggctaagttggtagacagattattccttaatg |
226 |
Q |
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| T |
33879049 |
tctccgtaatagtaaacttgtagccacctaacaaccttttatttccttatttttgtaattcatcaaagggctaagttggtagacagattattccttaatg |
33879148 |
T |
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| Q |
227 |
ctcgtaatctgttggaattatagtgaaaatccttcaa----gtgtgaaggtactggacgtagctaccaagttgttgggtgagtcgatataaactttctgt |
322 |
Q |
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| T |
33879149 |
ctcgtgatctgttggaattatagcgaaaatccttcaagtgtgtgtgaaggtactggacgtagctaccaagttgttgggtgagtcgatataaactttctgt |
33879248 |
T |
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| Q |
323 |
ctctctatcatttatctccttatccttaaatttgtttttgttcaacttgcccctctctcctt |
384 |
Q |
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| T |
33879249 |
ctctctatcatttatctccttatccttaaatttgtttttgttcaacttgcccatctctcctt |
33879310 |
T |
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