View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4686_low_19 (Length: 277)
Name: NF4686_low_19
Description: NF4686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4686_low_19 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 6 - 277
Target Start/End: Original strand, 6971985 - 6972256
Alignment:
| Q |
6 |
acattcattgatacagggtgactgtgtgaattcaggatatcccaaccgcaaggaatcatgatacaaaaattgagactaattaattagtgacacgctaata |
105 |
Q |
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| T |
6971985 |
acattcattgatacagggtgactgtgtgaattcaggatatcccaaccacaaggaatcatgatacaaaaattgagactaattaattagtgacacgctaata |
6972084 |
T |
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| Q |
106 |
aagtttacactagttaaagttgtgtttctaaattgccattgtgattacgccacaaaccttgatattagggcaaaatacggttggatacaactacgattac |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
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| T |
6972085 |
aagtttacactagttaaagttgtgtttctaaattgccattgtgattacgccacaaaccttgatattaaggcaaaatacggttggatacaactactattac |
6972184 |
T |
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| Q |
206 |
aactgtgatgccgttgcaaagacctctaaaacatttatattacgccactaattaattttcttttgaattcct |
277 |
Q |
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||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
6972185 |
aactgtgatgctgttgcaaagacctctaaaacctttatattacgccactaattaattttcttttgaattcct |
6972256 |
T |
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