View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4687_high_5 (Length: 225)
Name: NF4687_high_5
Description: NF4687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4687_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 35211576 - 35211766
Alignment:
| Q |
19 |
atgaattcataaatattggttttagttaccttccgactgggattaaaatagtgattannnnnnnnaataaaaataatgatttggttaagcacaaatgtat |
118 |
Q |
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| T |
35211576 |
atgaattcacaaatattggttttagttaccttccgactgggattaaaatagtgattattttttataataaaaataatgatttggttaagcacaaatgtat |
35211675 |
T |
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| Q |
119 |
ttgtcttttttcttggacggggtggttgaaaaattaaataagaaagtcacaattctaaattaaagagttctgagtattgaccataaaatat |
209 |
Q |
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| T |
35211676 |
ttgtcttttttcttggacggggtggttgaaaaattaaataagaaagtcacaattctaaattaaagagttctgagtattgaccataaaatat |
35211766 |
T |
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