View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4688_low_6 (Length: 251)
Name: NF4688_low_6
Description: NF4688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4688_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 35279001 - 35278759
Alignment:
| Q |
1 |
ttggttattaacattctgcagaaatcttcaagtcattatatgtcctttcgcgtgtatgtatgttgtctta-ggaagtggatattgatgcatttagctagt |
99 |
Q |
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| T |
35279001 |
ttggttattaacattctgcagaaatcttcaagtcattatatgtcctttcgcgtgtatgtatgttgtcttaaggaagtggatattgatgcatttagctagt |
35278902 |
T |
|
| Q |
100 |
gatcatgtagaagtggttggtggcgcatcctttacttaagtttctgcataattgacaacttcttcaagagctttgtttagtttgttatcttctttgaatt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35278901 |
gatcatgtagaagtggttggtggcgcatcctttacttaagtttctgcataattgacaacttcttcaagagctttgtttagtttgttatcttctttgaatt |
35278802 |
T |
|
| Q |
200 |
gacacaattgacgtttgttgtcaatgttgtttgttcttcttct |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35278801 |
gacacaattgacgtttgttgtcaatgttgtttgttcttcttct |
35278759 |
T |
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