View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4689-Insertion-1 (Length: 945)

Name: NF4689-Insertion-1
Description: NF4689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4689-Insertion-1
NF4689-Insertion-1
[»] chr8 (49 HSPs)
chr8 (39-843)||(3794754-3795583)
chr8 (714-808)||(3734733-3734827)
chr8 (390-485)||(3799051-3799145)
chr8 (714-808)||(34237765-34237859)
chr8 (678-804)||(34694650-34694776)
chr8 (678-796)||(41070770-41070888)
chr8 (692-808)||(26168936-26169052)
chr8 (714-807)||(4718643-4718736)
chr8 (714-807)||(28193472-28193565)
chr8 (714-807)||(39349254-39349347)
chr8 (691-807)||(3403589-3403705)
chr8 (714-804)||(27746445-27746535)
chr8 (717-806)||(19471608-19471697)
chr8 (717-806)||(19542532-19542621)
chr8 (717-806)||(19590075-19590164)
chr8 (715-807)||(20305906-20305998)
chr8 (715-807)||(21092539-21092631)
chr8 (716-807)||(2618184-2618275)
chr8 (678-785)||(34639281-34639387)
chr8 (714-784)||(14632975-14633045)
chr8 (714-807)||(18532105-18532198)
chr8 (714-807)||(42643228-42643321)
chr8 (692-807)||(32879277-32879393)
chr8 (714-805)||(28964033-28964124)
chr8 (698-804)||(8387538-8387644)
chr8 (714-804)||(15259516-15259606)
chr8 (694-760)||(36094729-36094795)
chr8 (699-795)||(11714914-11715010)
chr8 (714-790)||(21603245-21603321)
chr8 (401-456)||(3812417-3812471)
chr8 (678-761)||(13749099-13749182)
chr8 (714-785)||(18128533-18128604)
chr8 (678-785)||(22200634-22200741)
chr8 (714-795)||(264509-264590)
chr8 (714-795)||(651331-651412)
chr8 (714-795)||(837066-837147)
chr8 (715-796)||(8765637-8765718)
chr8 (390-454)||(3804425-3804488)
chr8 (714-806)||(42328004-42328095)
chr8 (714-784)||(4698833-4698903)
chr8 (737-808)||(5202223-5202294)
chr8 (737-804)||(8042655-8042722)
chr8 (703-774)||(15974936-15975006)
chr8 (716-783)||(16317636-16317703)
chr8 (714-756)||(6953117-6953159)
chr8 (717-807)||(7558056-7558146)
chr8 (717-774)||(12312877-12312934)
chr8 (228-281)||(13921204-13921257)
chr8 (717-782)||(20469940-20470005)
[»] chr4 (41 HSPs)
chr4 (691-807)||(41621683-41621799)
chr4 (714-808)||(25852207-25852301)
chr4 (698-806)||(13873388-13873497)
chr4 (714-807)||(40058962-40059055)
chr4 (714-807)||(32986191-32986284)
chr4 (714-803)||(34835527-34835616)
chr4 (714-807)||(54127452-54127545)
chr4 (714-809)||(27528905-27529000)
chr4 (716-807)||(52983613-52983704)
chr4 (699-788)||(13017742-13017831)
chr4 (714-807)||(13771593-13771686)
chr4 (714-807)||(22625180-22625273)
chr4 (714-807)||(33696389-33696482)
chr4 (714-790)||(2351024-2351100)
chr4 (714-784)||(7392073-7392143)
chr4 (714-807)||(46714386-46714480)
chr4 (714-807)||(33992620-33992713)
chr4 (714-807)||(34844868-34844961)
chr4 (714-807)||(35674851-35674944)
chr4 (715-807)||(1985830-1985922)
chr4 (714-804)||(20566346-20566437)
chr4 (717-796)||(51535618-51535697)
chr4 (715-807)||(42508493-42508585)
chr4 (714-785)||(49287874-49287945)
chr4 (716-806)||(19220528-19220618)
chr4 (717-782)||(38869794-38869860)
chr4 (177-290)||(51079048-51079162)
chr4 (715-804)||(13584365-13584454)
chr4 (714-807)||(19660642-19660735)
chr4 (714-783)||(20078094-20078163)
chr4 (695-750)||(22630277-22630332)
chr4 (714-761)||(38740890-38740937)
chr4 (728-803)||(42245744-42245819)
chr4 (720-783)||(56409976-56410039)
chr4 (716-774)||(12500170-12500228)
chr4 (714-796)||(35229173-35229254)
chr4 (719-789)||(43352439-43352509)
chr4 (738-783)||(21344842-21344887)
chr4 (716-761)||(37455617-37455661)
chr4 (714-807)||(40307536-40307628)
chr4 (717-782)||(44343533-44343598)
[»] chr2 (43 HSPs)
chr2 (678-806)||(8192425-8192553)
chr2 (691-796)||(4618772-4618877)
chr2 (687-784)||(29698164-29698261)
chr2 (715-807)||(33827684-33827776)
chr2 (681-795)||(3405229-3405343)
chr2 (714-807)||(15037953-15038046)
chr2 (714-807)||(18976536-18976628)
chr2 (714-807)||(25293160-25293253)
chr2 (714-807)||(44946163-44946256)
chr2 (716-803)||(4852556-4852643)
chr2 (714-785)||(10582100-10582171)
chr2 (697-784)||(19525489-19525576)
chr2 (698-796)||(19605939-19606037)
chr2 (692-784)||(43374412-43374505)
chr2 (717-803)||(44976267-44976353)
chr2 (714-803)||(17324764-17324853)
chr2 (714-807)||(32845085-32845178)
chr2 (714-807)||(41313986-41314079)
chr2 (698-782)||(28194227-28194311)
chr2 (714-804)||(4567547-4567637)
chr2 (717-807)||(11941323-11941413)
chr2 (714-784)||(36242422-36242492)
chr2 (698-796)||(40591188-40591286)
chr2 (715-803)||(918808-918898)
chr2 (715-784)||(5394034-5394103)
chr2 (714-807)||(30466940-30467033)
chr2 (730-807)||(32526211-32526288)
chr2 (714-790)||(27290599-27290675)
chr2 (687-778)||(36179899-36179990)
chr2 (714-808)||(36390678-36390770)
chr2 (716-806)||(14946774-14946864)
chr2 (718-784)||(38341754-38341820)
chr2 (714-807)||(24195998-24196091)
chr2 (724-808)||(27269470-27269554)
chr2 (714-806)||(40997460-40997552)
chr2 (716-784)||(45271401-45271469)
chr2 (691-774)||(18708504-18708587)
chr2 (714-784)||(1191530-1191600)
chr2 (718-783)||(12517738-12517804)
chr2 (718-784)||(13266507-13266573)
chr2 (754-807)||(6714431-6714484)
chr2 (749-802)||(38784324-38784377)
chr2 (717-802)||(41329842-41329927)
[»] chr1 (49 HSPs)
chr1 (692-807)||(32729539-32729654)
chr1 (714-807)||(4621347-4621440)
chr1 (714-807)||(7946838-7946931)
chr1 (714-807)||(24674387-24674480)
chr1 (714-807)||(46607804-46607897)
chr1 (714-806)||(24216973-24217065)
chr1 (714-807)||(7197356-7197449)
chr1 (714-807)||(8077641-8077734)
chr1 (698-795)||(25237083-25237180)
chr1 (714-807)||(30677170-30677263)
chr1 (691-807)||(1138573-1138689)
chr1 (715-806)||(1486415-1486504)
chr1 (714-807)||(15059512-15059605)
chr1 (714-783)||(45859153-45859222)
chr1 (692-807)||(168195-168311)
chr1 (715-807)||(21726723-21726815)
chr1 (715-807)||(29057448-29057540)
chr1 (717-807)||(34778336-34778426)
chr1 (714-807)||(7766837-7766930)
chr1 (714-807)||(20487300-20487393)
chr1 (714-803)||(24122021-24122110)
chr1 (714-807)||(27454976-27455069)
chr1 (714-802)||(46113512-46113600)
chr1 (692-790)||(7578420-7578519)
chr1 (714-809)||(23232375-23232470)
chr1 (700-795)||(25496584-25496679)
chr1 (714-807)||(1378892-1378985)
chr1 (714-807)||(18646847-18646940)
chr1 (714-783)||(39964530-39964599)
chr1 (714-785)||(37351571-37351642)
chr1 (691-785)||(19034473-19034567)
chr1 (714-784)||(33905620-33905690)
chr1 (714-782)||(9500465-9500533)
chr1 (691-784)||(16539625-16539718)
chr1 (717-784)||(4471033-4471101)
chr1 (715-807)||(14258538-14258630)
chr1 (691-747)||(16899557-16899613)
chr1 (714-774)||(36155998-36156058)
chr1 (743-807)||(36987558-36987621)
chr1 (714-785)||(17935785-17935856)
chr1 (714-807)||(2537698-2537785)
chr1 (739-809)||(26608174-26608243)
chr1 (717-807)||(34965323-34965413)
chr1 (681-783)||(37047010-37047112)
chr1 (717-807)||(40802180-40802270)
chr1 (714-803)||(1378743-1378832)
chr1 (695-803)||(2272342-2272451)
chr1 (714-783)||(23734134-23734203)
chr1 (714-783)||(23741326-23741395)
[»] scaffold0576 (1 HSPs)
scaffold0576 (714-808)||(5192-5286)
[»] scaffold0026 (1 HSPs)
scaffold0026 (714-808)||(97476-97570)
[»] chr7 (45 HSPs)
chr7 (714-808)||(2751268-2751362)
chr7 (714-807)||(11997847-11997940)
chr7 (714-808)||(7175972-7176066)
chr7 (716-806)||(7799944-7800034)
chr7 (714-807)||(7275275-7275368)
chr7 (714-807)||(40543020-40543113)
chr7 (714-808)||(21217943-21218037)
chr7 (715-804)||(12211646-12211735)
chr7 (714-803)||(22119890-22119979)
chr7 (714-806)||(2103054-2103146)
chr7 (705-809)||(28646965-28647069)
chr7 (691-806)||(23330826-23330941)
chr7 (714-796)||(21835160-21835242)
chr7 (691-804)||(8435782-8435895)
chr7 (714-807)||(10091186-10091279)
chr7 (714-807)||(18044105-18044198)
chr7 (714-807)||(27009357-27009450)
chr7 (714-790)||(22299864-22299940)
chr7 (715-807)||(27312150-27312242)
chr7 (715-806)||(19421230-19421321)
chr7 (716-807)||(43785411-43785502)
chr7 (717-807)||(2344297-2344387)
chr7 (714-796)||(22696329-22696411)
chr7 (692-785)||(22703506-22703600)
chr7 (714-803)||(13332533-13332622)
chr7 (714-807)||(17197060-17197153)
chr7 (714-807)||(17212051-17212144)
chr7 (691-806)||(21574189-21574305)
chr7 (715-807)||(42913624-42913716)
chr7 (724-807)||(22264622-22264705)
chr7 (692-785)||(42814884-42814978)
chr7 (738-783)||(19612645-19612690)
chr7 (714-807)||(39145762-39145855)
chr7 (715-808)||(40332096-40332189)
chr7 (688-803)||(1469114-1469229)
chr7 (737-807)||(23854394-23854464)
chr7 (714-804)||(28089817-28089907)
chr7 (714-763)||(654814-654863)
chr7 (715-804)||(9718098-9718187)
chr7 (717-780)||(29785285-29785349)
chr7 (719-807)||(31713010-31713098)
chr7 (717-803)||(3950901-3950988)
chr7 (714-785)||(27704022-27704093)
chr7 (714-807)||(22638290-22638383)
chr7 (754-803)||(28003838-28003887)
[»] chr6 (26 HSPs)
chr6 (714-808)||(15360208-15360302)
chr6 (698-807)||(9208246-9208355)
chr6 (714-807)||(9238969-9239062)
chr6 (691-807)||(33499468-33499585)
chr6 (716-807)||(12591631-12591722)
chr6 (714-807)||(3222745-3222837)
chr6 (698-785)||(17149550-17149637)
chr6 (717-803)||(14212890-14212976)
chr6 (714-807)||(13753234-13753327)
chr6 (718-807)||(22576061-22576150)
chr6 (714-807)||(34147340-34147433)
chr6 (714-807)||(34159956-34160049)
chr6 (692-807)||(11007159-11007275)
chr6 (714-801)||(11448871-11448958)
chr6 (714-807)||(654256-654349)
chr6 (716-805)||(21982432-21982521)
chr6 (692-804)||(1344934-1345045)
chr6 (717-807)||(28672061-28672151)
chr6 (714-807)||(17081164-17081257)
chr6 (691-783)||(10377733-10377825)
chr6 (717-804)||(9843935-9844022)
chr6 (714-808)||(5360181-5360275)
chr6 (714-770)||(6691532-6691588)
chr6 (717-796)||(3907546-3907625)
chr6 (714-761)||(9583413-9583460)
chr6 (715-760)||(28028578-28028623)
[»] chr5 (38 HSPs)
chr5 (691-805)||(19145498-19145612)
chr5 (714-807)||(27498841-27498934)
chr5 (714-811)||(25586922-25587019)
chr5 (714-807)||(31288056-31288149)
chr5 (714-807)||(32059550-32059643)
chr5 (678-807)||(36895419-36895548)
chr5 (692-804)||(8484748-8484861)
chr5 (714-807)||(33709611-33709703)
chr5 (717-807)||(13038567-13038657)
chr5 (717-807)||(13108562-13108652)
chr5 (714-807)||(1827640-1827733)
chr5 (715-804)||(4603774-4603863)
chr5 (714-807)||(11926612-11926705)
chr5 (714-807)||(15641215-15641308)
chr5 (713-806)||(36954813-36954906)
chr5 (715-804)||(38631072-38631161)
chr5 (717-807)||(34310136-34310226)
chr5 (714-807)||(23270632-23270725)
chr5 (714-807)||(38684202-38684295)
chr5 (727-807)||(22392695-22392775)
chr5 (714-808)||(15931052-15931146)
chr5 (717-792)||(37495056-37495131)
chr5 (714-784)||(12398558-12398628)
chr5 (715-804)||(8780475-8780564)
chr5 (715-806)||(40330628-40330719)
chr5 (714-784)||(19456320-19456389)
chr5 (714-807)||(30485822-30485915)
chr5 (692-804)||(930572-930685)
chr5 (714-807)||(12317260-12317353)
chr5 (715-807)||(5049131-5049223)
chr5 (692-807)||(11464994-11465110)
chr5 (714-774)||(18207234-18207294)
chr5 (714-773)||(10869675-10869734)
chr5 (754-809)||(12647732-12647787)
chr5 (714-785)||(15971232-15971303)
chr5 (731-784)||(15485418-15485471)
chr5 (714-804)||(25750719-25750811)
chr5 (714-807)||(42193479-42193572)
[»] chr3 (53 HSPs)
chr3 (687-807)||(4252479-4252599)
chr3 (717-807)||(31537951-31538041)
chr3 (714-807)||(30807263-30807356)
chr3 (714-807)||(35492905-35492998)
chr3 (715-807)||(30257618-30257710)
chr3 (715-807)||(34492686-34492778)
chr3 (714-809)||(40133559-40133654)
chr3 (716-807)||(46576342-46576433)
chr3 (700-807)||(55371381-55371488)
chr3 (714-807)||(8456260-8456353)
chr3 (714-807)||(40940819-40940912)
chr3 (714-807)||(48977382-48977475)
chr3 (692-807)||(21362937-21363053)
chr3 (715-807)||(45529865-45529957)
chr3 (714-809)||(7485635-7485730)
chr3 (738-809)||(36660762-36660833)
chr3 (714-805)||(53424286-53424377)
chr3 (714-807)||(25289824-25289917)
chr3 (714-807)||(49258372-49258465)
chr3 (717-806)||(52455762-52455851)
chr3 (714-790)||(26108303-26108379)
chr3 (715-807)||(50582986-50583078)
chr3 (691-806)||(51390926-51391041)
chr3 (692-809)||(7470302-7470420)
chr3 (714-807)||(15566609-15566701)
chr3 (714-795)||(26174119-26174200)
chr3 (714-807)||(29915379-29915472)
chr3 (714-807)||(29964532-29964625)
chr3 (714-807)||(45272526-45272619)
chr3 (714-795)||(52821745-52821826)
chr3 (714-802)||(25379760-25379848)
chr3 (714-803)||(6041782-6041871)
chr3 (714-807)||(18176997-18177090)
chr3 (714-785)||(53234020-53234091)
chr3 (693-806)||(16140292-16140405)
chr3 (714-783)||(26158836-26158905)
chr3 (714-807)||(32151419-32151511)
chr3 (714-779)||(39041962-39042027)
chr3 (717-806)||(50162038-50162127)
chr3 (714-807)||(51532783-51532876)
chr3 (715-803)||(4462631-4462719)
chr3 (715-783)||(53863850-53863918)
chr3 (717-808)||(55287796-55287887)
chr3 (715-774)||(9853643-9853702)
chr3 (714-809)||(50731344-50731438)
chr3 (714-809)||(50781416-50781510)
chr3 (714-765)||(53288822-53288873)
chr3 (693-750)||(2511385-2511443)
chr3 (714-784)||(10083929-10083999)
chr3 (714-784)||(10190852-10190922)
chr3 (737-783)||(35623271-35623317)
chr3 (714-807)||(19857047-19857138)
chr3 (714-783)||(34844396-34844465)
[»] scaffold0070 (1 HSPs)
scaffold0070 (714-808)||(40318-40412)
[»] scaffold0199 (1 HSPs)
scaffold0199 (705-807)||(8508-8610)
[»] scaffold0623 (1 HSPs)
scaffold0623 (714-803)||(1166-1255)
[»] scaffold0366 (2 HSPs)
scaffold0366 (714-803)||(9409-9498)
scaffold0366 (714-803)||(12110-12199)
[»] scaffold0049 (1 HSPs)
scaffold0049 (717-807)||(66756-66846)
[»] scaffold0028 (1 HSPs)
scaffold0028 (717-807)||(27770-27860)
[»] scaffold0460 (1 HSPs)
scaffold0460 (714-807)||(8289-8382)
[»] scaffold0459 (1 HSPs)
scaffold0459 (714-803)||(10803-10892)
[»] scaffold0328 (1 HSPs)
scaffold0328 (714-807)||(14985-15078)
[»] scaffold0068 (1 HSPs)
scaffold0068 (715-807)||(41755-41847)
[»] scaffold0051 (1 HSPs)
scaffold0051 (714-806)||(52981-53073)
[»] scaffold0019 (1 HSPs)
scaffold0019 (714-782)||(161828-161896)
[»] scaffold0217 (1 HSPs)
scaffold0217 (714-807)||(7419-7512)
[»] scaffold0200 (1 HSPs)
scaffold0200 (714-807)||(26653-26746)
[»] scaffold0160 (1 HSPs)
scaffold0160 (691-790)||(29229-29328)
[»] scaffold0020 (1 HSPs)
scaffold0020 (699-758)||(123146-123205)
[»] scaffold0157 (1 HSPs)
scaffold0157 (716-774)||(20249-20307)


Alignment Details
Target: chr8 (Bit Score: 577; Significance: 0; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 577; E-Value: 0
Query Start/End: Original strand, 39 - 843
Target Start/End: Complemental strand, 3795583 - 3794754
Alignment:
Q  39 cccgcaggaaagtacttgctactagcataaacggcagcgaagtccttgggtattcatgcggttgattttccctagctaaatttgcaggaaacgggtattt 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3795583 cccgcaggaaagtacttgctactagcataaacggcagcgaagtccttgggtattcatgcggttgattttcccaagctaaatttgcaggaaacgggtattt 3795484  T
Q  139 gtagtattgaccacacataaatctactttctatgattcgatcaataaatcacaatatatttaatttaacttacttgtgaaacttattatccaatgttgga 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3795483 gtagtattgaccacacataaatctactttctatgattcgatcaataaatcacaatatatttaatttaacttacttgtgaaacttattatccaatgttgga 3795384  T
Q  239 aacaacattgtgcatgttgcatgacttctcatccttgtgcaccatagagttgactca--tataaatattcattcatttatttatttacgttcttaatttg 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3795383 aacaacattgtgcatgttgcatgacttctcatccttgtgcaccatagagttgactcatatataaatattcattcatttatttatttacgttcttaatttg 3795284  T
Q  337 cttagnnnnnnnnnatgtgtacaggtggaagcaaagattcatcaatgtcatgtagcatgctactttcggtacttgtcatcatcaaggctttggttttgct 436  Q
    |||||         |||||||||||||||||||||||||||||||||   ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  3795283 cttagtttttttttatgtgtacaggtggaagcaaagattcatcaatg---tgtagcatgctgctttcggtgcttgtcatcatcaaggctttggttttgct 3795187  T
Q  437 tgccttctgctacaaaaagtatgttctgaagagtatattgttaacattacaactcttatat------------atcgttaacacgatcattgattcaaaa 524  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||            |   ||||||| |||||||||||||||    
T  3795186 tg-cttctgctacaaaaagtatgttccgaagagtatattgttaacattacaactcttatatttgaactgccaaaggtttaacacaatcattgattcaaaa 3795088  T
Q  525 ctttattttctctatttctctttctatcacat--------acatatcacattattctctcggtctcaagatatagatggattttgagtg------tttgc 610  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||      |||||    
T  3795087 ctttattttctctatttctctttctatcacataattaagaacatatcacattattctctcggtctcaagatatagatggattttgagtgttttaatttgc 3794988  T
Q  611 caattgttttatttttccttaacattattctttaaaacag---nnnnnnnncgttttgaaaactcgggtatctaagctcgagtaaagctttgtatgaact 707  Q
    |||||||||||||||||||||||||||||||||||||| |             |||||||||||| ||||||||||||||||||||||||||||||||||    
T  3794987 caattgttttatttttccttaacattattctttaaaacggtttttttttttttttttgaaaactc-ggtatctaagctcgagtaaagctttgtatgaact 3794889  T
Q  708 tgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3794888 tgcccgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatggatt 3794789  T
Q  808 cagtatgcttatggaatggtgttagaatgtgcgaga 843  Q
    |||||||||||| |||||||||||||||||||||||    
T  3794788 cagtatgcttat-gaatggtgttagaatgtgcgaga 3794754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 714 - 808
Target Start/End: Original strand, 3734733 - 3734827
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  3734733 ccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttc 3734827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 390 - 485
Target Start/End: Complemental strand, 3799145 - 3799051
Alignment:
Q  390 agcatgctactttcggtacttgtcatcatcaaggctttggttttgcttgccttctgctacaaaaagtatgttctgaagagtatattgttaacatta 485  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||||||||||| | || ||  |||||||||||||||||||||    
T  3799145 agcatgctacttttggtgcttgtcatcgtcaaggctttggttttgcttg-cttctgctacaaaaaatgtgctccaaagagtatattgttaacatta 3799051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 714 - 808
Target Start/End: Original strand, 34237765 - 34237859
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  34237765 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttc 34237859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 678 - 804
Target Start/End: Original strand, 34694650 - 34694776
Alignment:
Q  678 tctaagctcgagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaa 777  Q
    |||||||  ||| ||||||||||||||| |||||  ||||||||||||||||| |||| ||||| | ||||||||||||||||||||| |||||||  ||    
T  34694650 tctaagccggagcaaagctttgtatgaatttgcccaccgaaattggcaccagatggaatcgaacctaagaccttgagaggagcaaactccaagatcacaa 34694749  T
Q  778 gccaaccattaggtcaaccacaaatgg 804  Q
    | |||||| |||  ||||| |||||||    
T  34694750 gtcaaccactagaccaaccccaaatgg 34694776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 678 - 796
Target Start/End: Complemental strand, 41070888 - 41070770
Alignment:
Q  678 tctaagctcgagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaa 777  Q
    |||||||  |||||||||| ||||||||||||||  ||||||||| ||||| |||||| ||||| |||||||||||||| |||| ||| |||||||| ||    
T  41070888 tctaagccagagtaaagctatgtatgaacttgcccaccgaaattgacaccaaagggaatcgaacttgagaccttgagagtagcacactccaagatcccaa 41070789  T
Q  778 gccaaccattaggtcaacc 796  Q
    | |||||| |||| |||||    
T  41070788 gtcaaccactaggccaacc 41070770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 692 - 808
Target Start/End: Original strand, 26168936 - 26169052
Alignment:
Q  692 aagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggt 791  Q
    ||||| ||||||||||||||  |||||||||||| |||  |||| | ||| ||||||||||||||||||||||| |||||||| |||| ||||| ||||     
T  26168936 aagctctgtatgaacttgcccaccgaaattggcatcaggaggaatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggc 26169035  T
Q  792 caaccacaaatgggttc 808  Q
    |||||  ||||||||||    
T  26169036 caaccctaaatgggttc 26169052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 4718736 - 4718643
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagacct-tgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  4718736 ccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 4718643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 28193565 - 28193472
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||| ||||    
T  28193565 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaataggtt 28193472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 39349347 - 39349254
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| | || ||||| ||||||||||    
T  39349347 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaatgggtt 39349254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 691 - 807
Target Start/End: Original strand, 3403589 - 3403705
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||| |||||||| |||||||  ||||||||||||||||| |||| ||||||| ||||||||||| ||||||||| |||||||  | |||||||   |||    
T  3403589 aaagttttgtatggacttgcccaccgaaattggcaccagatggaatcgaacataagaccttgagatgagcaaactccaagatctcaggccaaccccaagg 3403688  T
Q  791 tcaaccacaaatgggtt 807  Q
     ||||| ||||||||||    
T  3403689 ccaacctcaaatgggtt 3403705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 714 - 804
Target Start/End: Original strand, 27746445 - 27746535
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    ||||||||||||||| |||||| ||||| |||||||||  |||||||||||| |||||||| || ||||||| |||| ||||| |||||||    
T  27746445 ccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 27746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 717 - 806
Target Start/End: Complemental strand, 19471697 - 19471608
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||||||||||||||| | ||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||    
T  19471697 aaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19471608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 717 - 806
Target Start/End: Complemental strand, 19542621 - 19542532
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||||||||||||||| | ||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||    
T  19542621 aaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19542532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 717 - 806
Target Start/End: Original strand, 19590075 - 19590164
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||||||||||||||| | ||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||    
T  19590075 aaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 19590164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 715 - 807
Target Start/End: Complemental strand, 20305998 - 20305906
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||| |||| ||||  |||||||||  ||||||||||||  ||||||| |||||||||| |||| ||||| ||||||||||    
T  20305998 cgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtt 20305906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 715 - 807
Target Start/End: Complemental strand, 21092631 - 21092539
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||| |||| ||||  |||||||||  ||||||||||||  ||||||| |||||||||| |||| ||||| ||||||||||    
T  21092631 cgaaattggcaccagaaggaatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgggtt 21092539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 716 - 807
Target Start/End: Complemental strand, 2618275 - 2618184
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||| |||||   ||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  2618275 gaaattggcaccagagggaatcgaacccaagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 2618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 678 - 785
Target Start/End: Original strand, 34639281 - 34639387
Alignment:
Q  678 tctaagctcgagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaa 777  Q
    |||||||  ||| |||||| |||||| |||| ||  ||||||||||||||||||||| | || | ||||||||||||||||||| ||| |||||||| ||    
T  34639281 tctaagccagagcaaagctctgtatggacttacccaccgaaattggcaccagagggatc-gagcctgagaccttgagaggagcacactccaagatcccaa 34639379  T
Q  778 gccaacca 785  Q
    ||||||||    
T  34639380 gccaacca 34639387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 714 - 784
Target Start/End: Complemental strand, 14633045 - 14632975
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||    
T  14633045 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 14632975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 18532198 - 18532105
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| || | ||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  18532198 ccgaaattgacatctgagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 18532105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 42643228 - 42643321
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||| |||||||| ||||  ||||||||   |||||||||||| |||||||| ||| |||||| |||| ||||| ||||||||||    
T  42643228 ccgaaattggcactagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 42643321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 692 - 807
Target Start/End: Complemental strand, 32879393 - 32879277
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||| ||||||||||| |||  |||||||||||||||||||||| ||||| ||||||||   ||||| ||||||  ||||||| ||| |||||| |||     
T  32879393 aagctctgtatgaacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggaccaaactcgaagatcccaagtcaaccactaga 32879294  T
Q  791 tcaaccacaaatgggtt 807  Q
     ||||| ||||||||||    
T  32879293 ccaaccccaaatgggtt 32879277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 714 - 805
Target Start/End: Complemental strand, 28964124 - 28964033
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatggg 805  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||  ||||||  || ||||||| |||  ||||| ||||||||    
T  28964124 ccgaaattggcaccagatggaatcgaacatgaaaccttaagaggagcaaactctaagatctcaaaccaaccactagaccaaccccaaatggg 28964033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 698 - 804
Target Start/End: Original strand, 8387538 - 8387644
Alignment:
Q  698 tgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacca 797  Q
    |||||| |||||||  || |||||||||||||||| || ||||| ||||||| |||||| ||||||||  ||||||  ||| |||||| |||| |||||     
T  8387538 tgtatggacttgcccaccaaaattggcaccagaggaaatcgaacttgagaccctgagagaagcaaactctaagatctcaagacaaccactaggccaaccc 8387637  T
Q  798 caaatgg 804  Q
    |||||||    
T  8387638 caaatgg 8387644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 714 - 804
Target Start/End: Original strand, 15259516 - 15259606
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||| | |||||||| || ||||||| |||  ||||| |||||||    
T  15259516 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaatccaagatcccaaaccaaccactagaccaaccccaaatgg 15259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 694 - 760
Target Start/End: Complemental strand, 36094795 - 36094729
Alignment:
Q  694 gctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagc 760  Q
    |||||||||| ||||| || |||||||||  ||||||||||| ||||| ||||||||||||||||||    
T  36094795 gctttgtatggacttgtctaccgaaattgataccagagggaatcgaacctgagaccttgagaggagc 36094729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 699 - 795
Target Start/End: Original strand, 11714914 - 11715010
Alignment:
Q  699 gtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaac 795  Q
    ||||||||||||| || |||||||||| ||| ||||| ||||| ||| | |||||||| |||||||| |||||||  || ||||||| |||| ||||    
T  11714914 gtatgaacttgcccgctgaaattggcatcagggggaatcgaacctgaaatcttgagagaagcaaactccaagatctcaaaccaaccactaggccaac 11715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 714 - 790
Target Start/End: Complemental strand, 21603321 - 21603245
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||||||||||||| |||||| ||||| ||||||||   ||||||||||||  ||||||| |||||||||| ||||    
T  21603321 ccgaaattggcaccatagggaatcgaacctgagacctctggaggagcaaactctaagatcccaagccaaccactagg 21603245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 401 - 456
Target Start/End: Complemental strand, 3812471 - 3812417
Alignment:
Q  401 ttcggtacttgtcatcatcaaggctttggttttgcttgccttctgctacaaaaagt 456  Q
    |||||| ||||||| | ||||||||||||||||||||| |||||||||||||||||    
T  3812471 ttcggtgcttgtcaccgtcaaggctttggttttgcttg-cttctgctacaaaaagt 3812417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 678 - 761
Target Start/End: Complemental strand, 13749182 - 13749099
Alignment:
Q  678 tctaagctcgagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagca 761  Q
    |||||||  ||| |||||||||||||||||||||  || |||||||||||  ||| || ||||| ||| |||||||||||||||    
T  13749182 tctaagccagagcaaagctttgtatgaacttgcccaccaaaattggcaccgaaggaaatcgaacctgaaaccttgagaggagca 13749099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 18128604 - 18128533
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    |||||||||||||||||| ||| ||||  | ||||||||| ||||||| |||||||||||| ||| ||||||    
T  18128604 ccgaaattggcaccagagagaatcgaatctaagaccttgaaaggagcacacttcaagatcccaagtcaacca 18128533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 678 - 785
Target Start/End: Original strand, 22200634 - 22200741
Alignment:
Q  678 tctaagctcgagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaa 777  Q
    |||||||  ||| |||||| |||||||||||  |   |||||||||||| |||||||| ||||| |||||| ||||||| || ||||| |||||||| ||    
T  22200634 tctaagccagagcaaagctctgtatgaacttttccctcgaaattggcactagagggaatcgaacctgagactttgagagaagtaaactccaagatcccaa 22200733  T
Q  778 gccaacca 785  Q
     |||||||    
T  22200734 accaacca 22200741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 795
Target Start/End: Original strand, 264509 - 264590
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaac 795  Q
    ||||||||||||| |||||||| ||||| ||||| ||   ||||||||||||  ||||||| |||||||||| |||| ||||    
T  264509 ccgaaattggcactagagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 264590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 795
Target Start/End: Complemental strand, 651412 - 651331
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaac 795  Q
    ||||||||||||| |||||||| ||||| ||||| ||   ||||||||||||  ||||||| |||||||||| |||| ||||    
T  651412 ccgaaattggcactagagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 651331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 795
Target Start/End: Complemental strand, 837147 - 837066
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaac 795  Q
    ||||||||||||| |||||||| ||||| ||||| ||   ||||||||||||  ||||||| |||||||||| |||| ||||    
T  837147 ccgaaattggcactagagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 837066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 796
Target Start/End: Original strand, 8765637 - 8765718
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 796  Q
    ||||||||||||||||||||| ||||| ||||| ||   | |||||||||| |||||||  ||||||| |||||| ||||||    
T  8765637 cgaaattggcaccagagggaatcgaacctgagatctctgggggagcaaactccaagatctcaagccaatcattagctcaacc 8765718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 390 - 454
Target Start/End: Complemental strand, 3804488 - 3804425
Alignment:
Q  390 agcatgctactttcggtacttgtcatcatcaaggctttggttttgcttgccttctgctacaaaaa 454  Q
    |||||||||| || ||| ||||||||| ||||||||||||||| ||||| ||| |||||||||||    
T  3804488 agcatgctacatttggtgcttgtcatcgtcaaggctttggtttcgcttg-cttttgctacaaaaa 3804425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 806
Target Start/End: Complemental strand, 42328095 - 42328004
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    |||||||||||| ||||||||| | ||| ||| ||||   |||||| ||||| |||||||| |||||||||| |||| ||||| |||||||||    
T  42328095 ccgaaattggcaacagagggaatcaaacctgacacctctggaggag-aaactccaagatcccaagccaaccactaggccaaccccaaatgggt 42328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 784
Target Start/End: Original strand, 4698833 - 4698903
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagacct-tgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||||||| |||||||||||| ||||| |||||||| ||| ||||||||||| |||||||| || ||||||    
T  4698833 ccgaaattgacaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcccaaaccaacc 4698903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 737 - 808
Target Start/End: Original strand, 5202223 - 5202294
Alignment:
Q  737 cgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    ||||| |||||| |||||| ||||||||||||||||| ||| ||||| |||||  ||||| |||||| ||||    
T  5202223 cgaacttgagactttgagatgagcaaacttcaagatcttaaaccaactattagaccaaccccaaatgagttc 5202294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 737 - 804
Target Start/End: Complemental strand, 8042722 - 8042655
Alignment:
Q  737 cgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    ||||| |||||| ||  |||||||||||| |||||||| ||||||| || |||||||||| |||||||    
T  8042722 cgaacctgagacttttggaggagcaaactccaagatcccaagccaagcactaggtcaaccccaaatgg 8042655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 703 - 774
Target Start/End: Complemental strand, 15975006 - 15974936
Alignment:
Q  703 gaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcc 774  Q
    |||||||||  |||||||| |||| || ||||| ||||| ||||||||||||||||||| ||| ||||||||    
T  15975006 gaacttgcccaccgaaatttgcactag-gggaatcgaacttgagaccttgagaggagcatactccaagatcc 15974936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 783
Target Start/End: Complemental strand, 16317703 - 16317636
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||||||||| ||| ||||||||||||  ||||||||||| |||  ||| ||| ||||||||    
T  16317703 gaaattggcaccagagagaatcgaacatgagacgctgagaggagcacactctaaggtcccaagccaac 16317636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 714 - 756
Target Start/End: Original strand, 6953117 - 6953159
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagag 756  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||    
T  6953117 ccgaaattggcaccagagggaatcgaacctgagacctttagag 6953159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 717 - 807
Target Start/End: Original strand, 7558056 - 7558146
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||| || ||||  |||||| |   |||||||||||| |||||||| |||| ||| | |||| ||||| ||||||||||    
T  7558056 aaattggcaccagaggaaatcgaatctgagacttctggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggtt 7558146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 774
Target Start/End: Complemental strand, 12312934 - 12312877
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcc 774  Q
    |||||||||||||||| || ||||| |||||  |||||| ||||||||| ||||||||    
T  12312934 aaattggcaccagaggaaatcgaacttgagattttgagaagagcaaactccaagatcc 12312877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 13921204 - 13921257
Alignment:
Q  228 ccaatgttggaaacaacattgtgcatgttgcatgacttctcatccttgtgcacc 281  Q
    |||||| |||||||||| |||| |||| |||| ||||| |||||||||||||||    
T  13921204 ccaatggtggaaacaaccttgtacatggtgcaagacttatcatccttgtgcacc 13921257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 782
Target Start/End: Complemental strand, 20470005 - 20469940
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaa 782  Q
    |||||||| | |||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||    
T  20470005 aaattggctctagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaa 20469940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 1e-25; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 691 - 807
Target Start/End: Original strand, 41621683 - 41621799
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||| |||||| | |||||  || |||||||||||||||| || | ||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  41621683 aaagctctgtatggatttgcccaccaaaattggcaccagaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccattagg 41621782  T
Q  791 tcaaccacaaatgggtt 807  Q
     ||||| ||||||||||    
T  41621783 ccaaccccaaatgggtt 41621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 714 - 808
Target Start/End: Complemental strand, 25852301 - 25852207
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  25852301 ccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttc 25852207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 698 - 806
Target Start/End: Original strand, 13873388 - 13873497
Alignment:
Q  698 tgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 796  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||| |||||||||   ||||||||||| |||||||| |||| ||||| |||| |||||    
T  13873388 tgtatgaacttagcctaccgaaattggcaccagagggaatcgaacctgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaacc 13873487  T
Q  797 acaaatgggt 806  Q
     |||||||||    
T  13873488 ccaaatgggt 13873497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 40058962 - 40059055
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||| ||| ||||| ||||||||  ||||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  40058962 ccgaaattggcaccagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 40059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 32986284 - 32986191
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||||||||||  |||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  32986284 ccgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 32986191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 803
Target Start/End: Complemental strand, 34835616 - 34835527
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||||||||||  ||||||| |||||||||| |||  ||||| ||||||    
T  34835616 ccgaaattgacaccagagggaatcgaacatgagaccttaagaggagcaaactctaagatcccaagccaaccactagaccaaccccaaatg 34835527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 54127452 - 54127545
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||| ||||||||  |||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  54127452 ccgaaattggcacaagagggaattgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 54127545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 714 - 809
Target Start/End: Original strand, 27528905 - 27529000
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttca 809  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| || | ||||| || |||||||||    
T  27528905 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccagatgggttca 27529000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 716 - 807
Target Start/End: Complemental strand, 52983704 - 52983613
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||  |||||||||| |||| ||||| ||||||||||    
T  52983704 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgggtt 52983613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 699 - 788
Target Start/End: Complemental strand, 13017831 - 13017742
Alignment:
Q  699 gtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccatta 788  Q
    |||||||||||||  || ||||||||| |||||||||  |||| |||||||||||||||| || |||||||||| | |||||||||||||    
T  13017831 gtatgaacttgcccaccaaaattggcaacagagggaatggaacctgagaccttgagaggaacacacttcaagattccaagccaaccatta 13017742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 13771593 - 13771686
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||| |||| || ||||||||| ||||  ||||||||||||| |||||||||||||||||| ||||||||||| ||  ||||| ||||||||||    
T  13771593 ccgagattgacatcagagggaatcgaatttgagaccttgagatgagcaaacttcaagatcccaagccaaccatcagaccaaccccaaatgggtt 13771686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 22625180 - 22625273
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||| |||||||||| ||||| ||||||||   |||||| ||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  22625180 ccgaaattggctccagagggaatcgaacctgagacctctggaggagtaaactccaagatcccaagccaaccactaggccaacctcaaatgggtt 22625273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 33696389 - 33696482
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||||||||||  |||| ||||||||   |||||||||||| |||||||| |||||||||| |||| |||||  |||||||||    
T  33696389 ccgaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccctaaatgggtt 33696482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 714 - 790
Target Start/End: Complemental strand, 2351100 - 2351024
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||||||||||||||||||| ||||| ||||||||   ||||||||||||||||||| | |||||||||| ||||    
T  2351100 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaacttcaagattccaagccaaccactagg 2351024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 714 - 784
Target Start/End: Original strand, 7392073 - 7392143
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||||||||||||| |||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||    
T  7392073 ccgaaattggcaccatagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 7392143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 46714480 - 46714386
Alignment:
Q  714 ccgaaattggcaccagagggaac-cgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||| ||||||  ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  46714480 ccgaaattggcaccaaagggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 46714386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 33992713 - 33992620
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||| ||| ||||| | ||||||   |||||||||||| |||||||| || ||||||| ||||||||||  |||||||||    
T  33992713 ccgaaattggcaccagagagaatcgaacctaagacctctggaggagcaaactccaagatcccaaaccaaccactaggtcaaccctaaatgggtt 33992620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 34844868 - 34844961
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||| ||| ||||| ||||||||   |||||||||||| |||||||  |||| ||||| |||| ||||| ||||||||||    
T  34844868 ccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaaccccaaatgggtt 34844961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 35674851 - 35674944
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||| |||||||||| ||||| || ||||||  || ||||||||| |||||||| |||||||||| | || ||||| ||||||||||    
T  35674851 ccgaaattggctccagagggaatcgaacctgtgacctttggaagagcaaactccaagatcccaagccaaccacttggccaaccccaaatgggtt 35674944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 715 - 807
Target Start/End: Complemental strand, 1985922 - 1985830
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||| |||||| |||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||| | ||||||||||    
T  1985922 cgaaattcgcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgggtt 1985830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 714 - 804
Target Start/End: Complemental strand, 20566437 - 20566346
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgag-accttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||||||||||||||||||| ||||| |||  ||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||    
T  20566437 ccgaaattggcaccagagggaatcgaacctgatcacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 20566346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 717 - 796
Target Start/End: Complemental strand, 51535697 - 51535618
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 796  Q
    ||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| ||| |||||| |||| |||||    
T  51535697 aaattggcaccagagggaatcgaacctgagacctgtggaggagcaaactccaagatcccaagtcaaccactaggccaacc 51535618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 807
Target Start/End: Original strand, 42508493 - 42508585
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||| | | || | ||| | |||| ||||| ||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||||    
T  42508493 cgaaattggcaccaaaagaaatcaaactttagactttgaggggagcaaacatcaagatcccaagtcaaccattaggtcaacctcaaatcggtt 42508585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 49287945 - 49287874
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    |||||||||||||||||| ||| ||||| ||||||||   |||||||||||| |||||||| || |||||||    
T  49287945 ccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaacca 49287874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 716 - 806
Target Start/End: Complemental strand, 19220618 - 19220528
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||||||| ||||| || ||||| ||| ||||||||||||||| ||| ||||||| |||| ||||||  | | ||||| |||||||||    
T  19220618 gaaattggcactagaggaaatcgaacctgaaaccttgagaggagcacactccaagatcttaagtcaaccaccatgccaacctcaaatgggt 19220528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 717 - 782
Target Start/End: Complemental strand, 38869860 - 38869794
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttga-gaggagcaaacttcaagatcctaagccaa 782  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||| ||| | |||||| |||||||    
T  38869860 aaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaa 38869794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 290
Target Start/End: Complemental strand, 51079162 - 51079048
Alignment:
Q  177 gatcaataaatcacaatatatttaatttaacttacttgtgaaacttatt-atccaatgttggaaacaacattgtgcatgttgcatgacttctcatccttg 275  Q
    |||||||||||| ||   ||||| ||| |||||| | ||| || ||||| |||||||  |||||||||| ||||||||| |||| ||||| || | ||||    
T  51079162 gatcaataaatctcatcctattttattaaacttaatagtggaatttattgatccaatagtggaaacaaccttgtgcatggtgcaagacttatcttgcttg 51079063  T
Q  276 tgcaccatagagttg 290  Q
    |||||||||||||||    
T  51079062 tgcaccatagagttg 51079048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 804
Target Start/End: Original strand, 13584365 - 13584454
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||||| |||||||||||| ||||| |||||| ||  |||||||||||| ||| |||  | |||||||| |||| ||||| |||||||    
T  13584365 cgaaattgacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacctcaaatgg 13584454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 19660642 - 19660735
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||| ||| ||||| ||| | ||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||  ||||||||||    
T  19660642 ccgaaatttgcatcagagagaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaaatgggtt 19660735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 783
Target Start/End: Original strand, 20078094 - 20078163
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||||||||| ||||| | ||| ||||||||   |||||||||||| |||||||| ||||||||    
T  20078094 ccgaaattggcaccagtgggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaac 20078163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 695 - 750
Target Start/End: Original strand, 22630277 - 22630332
Alignment:
Q  695 ctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagacct 750  Q
    ||||||||| |||||||  || ||||||||||||||||||| ||||| ||||||||    
T  22630277 ctttgtatggacttgcccaccaaaattggcaccagagggaatcgaacctgagacct 22630332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 761
Target Start/End: Complemental strand, 38740937 - 38740890
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagca 761  Q
    ||||||||| |||||||||||| ||||| ||||||||| |||||||||    
T  38740937 ccgaaattgacaccagagggaatcgaacctgagaccttaagaggagca 38740890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 728 - 803
Target Start/End: Complemental strand, 42245819 - 42245744
Alignment:
Q  728 agagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    |||||||| |||||  |||||||| |||||||||||||  ||||||| ||| |||||| |||| ||||| ||||||    
T  42245819 agagggaatcgaacccgagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatg 42245744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 783
Target Start/End: Complemental strand, 56410039 - 56409976
Alignment:
Q  720 ttggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||| | ||| ||||| ||||||||||||||||||| ||| |||| ||| ||||||||    
T  56410039 ttggcaccagggagaatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaac 56409976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 716 - 774
Target Start/End: Original strand, 12500170 - 12500228
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcc 774  Q
    |||||||||||||||||||| | ||| |||||||||   ||||||||||| ||||||||    
T  12500170 gaaattggcaccagagggaatcaaacctgagacctttgaaggagcaaactccaagatcc 12500228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 714 - 796
Target Start/End: Complemental strand, 35229254 - 35229173
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 796  Q
    ||||||||||||  ||| |||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| |||||    
T  35229254 ccgaaattggcat-agaaggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 35229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 719 - 789
Target Start/End: Original strand, 43352439 - 43352509
Alignment:
Q  719 attggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattag 789  Q
    |||| |||||||| ||| ||||| ||||  ||||||||||||||||| || ||||  ||||||||||||||    
T  43352439 attgacaccagagagaatcgaacctgagttcttgagaggagcaaactccatgatctcaagccaaccattag 43352509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 738 - 783
Target Start/End: Complemental strand, 21344887 - 21344842
Alignment:
Q  738 gaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||||||||||||||||| ||| |||| ||| ||||||||    
T  21344887 gaacatgagaccttgagaggagcacactccaaggtcccaagccaac 21344842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 716 - 761
Target Start/End: Complemental strand, 37455661 - 37455617
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagca 761  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||    
T  37455661 gaaattggcaccag-gggaatcgaacctgagaccttgagaggagca 37455617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 40307628 - 40307536
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||| ||| || | || |||||||||||||||||||| ||| ||| |||| || |||| || ||||||||   ||||||||||    
T  40307628 ccgaaattggcaccaaagg-aatcaaatatgagaccttgagaggagcacactccaaaatcccaaaccaaacactaggtcaattccaaatgggtt 40307536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 782
Target Start/End: Complemental strand, 44343598 - 44343533
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaa 782  Q
    ||||| ||||||||||||| ||||| |||| ||||  | |||||||||| |||||||| |||||||    
T  44343598 aaattagcaccagagggaatcgaacttgagtcctttgggggagcaaactccaagatcccaagccaa 44343533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 1e-25; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 678 - 806
Target Start/End: Original strand, 8192425 - 8192553
Alignment:
Q  678 tctaagctcgagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaa 777  Q
    |||||||  ||| |||||| | |||| |||||||  |||| ||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||| ||    
T  8192425 tctaagccagagcaaagctctatatggacttgcccaccgacattggcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaa 8192524  T
Q  778 gccaaccattaggtcaaccacaaatgggt 806  Q
    |||||||| |||| ||||| |||||||||    
T  8192525 gccaaccactaggccaaccccaaatgggt 8192553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 691 - 796
Target Start/End: Original strand, 4618772 - 4618877
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||| |||||||| ||||||| ||||||||||||||||| || || ||||| ||| ||||||||||||||| ||| |||||| | |||||||||| ||||    
T  4618772 aaagttttgtatggacttgcccgccgaaattggcaccaggggaaatcgaacctgaaaccttgagaggagcatactccaagattccaagccaaccactagg 4618871  T
Q  791 tcaacc 796  Q
     |||||    
T  4618872 ccaacc 4618877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 687 - 784
Target Start/End: Complemental strand, 29698261 - 29698164
Alignment:
Q  687 gagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    |||||||||| ||||||||||||||  ||||||||| ||||||||| ||   ||| ||||||||||||||||||||| | |||||||| |||||||||    
T  29698261 gagtaaagctctgtatgaacttgcccaccgaaattgacaccagaggaaataaaacttgagaccttgagaggagcaaattccaagatcccaagccaacc 29698164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 715 - 807
Target Start/End: Original strand, 33827684 - 33827776
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||||||||| ||||| ||||||||   ||||||||| || |||||||| |||||||||| |||| ||||| ||||||||||    
T  33827684 cgaaattggcaccagagggaatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaaccccaaatgggtt 33827776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 681 - 795
Target Start/End: Original strand, 3405229 - 3405343
Alignment:
Q  681 aagctcgagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagcc 780  Q
    ||||| ||||||||||||||||| |||||||     ||||||||||||||||||| ||||| || |||||||||| ||||| | | |||||||| ||| |    
T  3405229 aagctagagtaaagctttgtatggacttgcccattaaaattggcaccagagggaatcgaacctgtgaccttgagatgagcacattccaagatcccaagtc 3405328  T
Q  781 aaccattaggtcaac 795  Q
    ||||| |||||||||    
T  3405329 aaccactaggtcaac 3405343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 15038046 - 15037953
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||| |||||| ||||| |||||||||  |||||||||||| ||||||||  || |||||| |||| ||||| ||||||||||    
T  15038046 ccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaaccccaaatgggtt 15037953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 18976536 - 18976628
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||| | |||||||| ||||||||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  18976536 ccgaaattggctc-agagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 18976628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 25293253 - 25293160
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| ||| |||||| |||  ||||| ||||||||||    
T  25293253 ccgaaattggcaccagagggaatcgaacctgagacctctcgaggagcaaactccaagatcccaagtcaaccactagaccaacctcaaatgggtt 25293160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 44946163 - 44946256
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||| |||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||  ||||| ||||||||||    
T  44946163 ccgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 44946256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 716 - 803
Target Start/End: Complemental strand, 4852643 - 4852556
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    |||||| ||||||||||||| ||||| |||||||||  |||||||||||| |||||| | ||| |||||| |||||||||| ||||||    
T  4852643 gaaattagcaccagagggaatcgaacctgagacctttggaggagcaaactccaagattccaagtcaaccactaggtcaaccccaaatg 4852556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 10582100 - 10582171
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| ||||||||||    
T  10582100 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacca 10582171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 697 - 784
Target Start/End: Original strand, 19525489 - 19525576
Alignment:
Q  697 ttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||||| |||||||  || ||||||||||||||||||| ||||| ||||| |||||||| | || |||||||||||| |||||||||    
T  19525489 ttgtatggacttgcccaccaaaattggcaccagagggaatcgaacctgagatcttgagagaaacacacttcaagatcccaagccaacc 19525576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 698 - 796
Target Start/End: Original strand, 19605939 - 19606037
Alignment:
Q  698 tgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 796  Q
    |||||| |||||||  |||||||| |||  |||||||| ||||| ||||||||||||||||||  ||| |||||||| |||||||||| |||| |||||    
T  19605939 tgtatggacttgcccaccgaaattagcattagagggaatcgaacctgagaccttgagaggagcgcactccaagatcccaagccaaccactagggcaacc 19606037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 692 - 784
Target Start/End: Original strand, 43374412 - 43374505
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagacct-tgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||||||||| ||||| |||  |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||| |||||||| |||||||||    
T  43374412 aagctttgtataaacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcccaagccaacc 43374505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 717 - 803
Target Start/End: Original strand, 44976267 - 44976353
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||||||||||||| ||||| ||||||||   |||||||||||  |||||||| |||||||||| |||| ||||| ||||||    
T  44976267 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaggccaaccccaaatg 44976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 803
Target Start/End: Complemental strand, 17324853 - 17324764
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||| | || ||||||| |||| ||||| ||||||    
T  17324853 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaaccccaaatg 17324764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 32845178 - 32845085
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||| || ||  |||||||||||| |||||||| |||| ||| | |||| ||||| ||||||||||    
T  32845178 ccgaaattggcaccagagggaatcgaacctgaaacttttggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgggtt 32845085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 41314079 - 41313986
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| |||||||||||| ||||| ||||||||   |||||||||||| |||||||| || ||||||| || | ||||| ||||||||||    
T  41314079 ccgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactacggcaaccccaaatgggtt 41313986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 698 - 782
Target Start/End: Original strand, 28194227 - 28194311
Alignment:
Q  698 tgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaa 782  Q
    |||||| |||||||  |||||||||||||||||| ||| ||||| | ||||||| ||||||||| ||| |||||||| |||||||    
T  28194227 tgtatggacttgcccaccgaaattggcaccagagagaatcgaacctaagaccttaagaggagcacactccaagatcccaagccaa 28194311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 714 - 804
Target Start/End: Original strand, 4567547 - 4567637
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagacct-tgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    ||||||||||||||||||| || ||||| |||||| | ||| |||||||||||||||||||| |||||||| | |||| ||||| |||||||    
T  4567547 ccgaaattggcaccagaggaaatcgaacctgagacttctga-aggagcaaacttcaagatcccaagccaactactaggccaaccccaaatgg 4567637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 807
Target Start/End: Original strand, 11941323 - 11941413
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| ||||||  |||| ||||||||   |||||||||||| |||||||| |||||||||| |||  ||||| ||||||||||    
T  11941323 aaattggcaccatagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 11941413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 714 - 784
Target Start/End: Original strand, 36242422 - 36242492
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||||||| |||||||||||| ||||| ||||||||   |||||||||| |||||||||| |||||||||    
T  36242422 ccgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaatttcaagatcccaagccaacc 36242492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 698 - 796
Target Start/End: Complemental strand, 40591286 - 40591188
Alignment:
Q  698 tgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 796  Q
    |||||| |||||||  ||||||||| ||||||| | || | ||| |||||| |||||||||||| ||| |||||||  |||||||| ||||||||||||    
T  40591286 tgtatggacttgcccaccgaaattgccaccagaagaaatcaaacctgagactttgagaggagcacactccaagatctcaagccaactattaggtcaacc 40591188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 803
Target Start/End: Original strand, 918808 - 918898
Alignment:
Q  715 cgaaattggcaccagagggaaccga---acatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    |||||||||||| |||||||| |||   || ||||||||  ||||||||||||||||| |||| |||||||||| |||||||||| ||||||    
T  918808 cgaaattggcacaagagggaatcgacgaacttgagacctc-agaggagcaaacttcaaaatcccaagccaaccactaggtcaaccccaaatg 918898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 784
Target Start/End: Complemental strand, 5394103 - 5394034
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    |||||||| |||||||||||| ||||| |||||||||  |||||||||||| |||||||  |||||||||    
T  5394103 cgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaagatctcaagccaacc 5394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 30466940 - 30467033
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| ||||| ||| ||||| ||||||||  |||||| |||||| ||| |||| || ||||||| |||| ||||| ||||||||||    
T  30466940 ccgaaattggcagcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaaccccaaatgggtt 30467033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 730 - 807
Target Start/End: Original strand, 32526211 - 32526288
Alignment:
Q  730 agggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| ||  |||||| || | ||||  ||||||||||    
T  32526211 agggaatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccactaagccaactccaaatgggtt 32526288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 714 - 790
Target Start/End: Complemental strand, 27290675 - 27290599
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||||||||||||  |||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| ||||    
T  27290675 ccgaaattggcaccgaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagg 27290599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 687 - 778
Target Start/End: Complemental strand, 36179990 - 36179899
Alignment:
Q  687 gagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaag 778  Q
    ||||||| ||||||||| ||||||||  |||||||| || ||| | ||| |||||||||||||| |||| ||  ||||| ||||||||||||    
T  36179990 gagtaaaactttgtatggacttgcctatcgaaattgacatcagggagaatcgaacatgagacctcgagatgaaaaaactccaagatcctaag 36179899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 714 - 808
Target Start/End: Original strand, 36390678 - 36390770
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    ||||||||||||||||||| || ||||| |||||||||  ||| ||||||||   |||||| || ||||||| |||| ||||| |||||||||||    
T  36390678 ccgaaattggcaccagaggaaatcgaacctgagacctttggagaagcaaact--cagatcccaaaccaaccactaggccaaccccaaatgggttc 36390770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 716 - 806
Target Start/End: Complemental strand, 14946864 - 14946774
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||| ||||||||  || ||||| | | |||||||||||||||||||||||||||  ||| |||||| |||| ||||  |||||||||    
T  14946864 gaaattgacaccagagaaaatcgaacctaaaaccttgagaggagcaaacttcaagatctcaagtcaaccactaggccaactccaaatgggt 14946774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 38341820 - 38341754
Alignment:
Q  718 aattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||| || ||| ||||| ||||  |||||||||||||||||||||||||||||||| ||| |||||    
T  38341820 aattgacaacagggggaatcgaatctgagaccttgagaggagcaaacttcaagatcccaagtcaacc 38341754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 24196091 - 24195998
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||| ||||||||||||| ||||| ||| ||||   ||||||| |||  ||| |||| |||||||||| |||| ||||| ||||||||||    
T  24196091 ccgaaatttgcaccagagggaatcgaacctgaaacctctggaggagcgaaccccaaaatcccaagccaaccactaggccaaccccaaatgggtt 24195998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 724 - 808
Target Start/End: Original strand, 27269470 - 27269554
Alignment:
Q  724 caccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||| | ||| | | ||||| |||||||||||||  ||||||| |||||||||| || | ||||| |||||||||||    
T  27269470 caccagagggaatcaaacctaaaacctttagaggagcaaactcgaagatcccaagccaaccactatgccaaccccaaatgggttc 27269554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 806
Target Start/End: Original strand, 40997460 - 40997552
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    |||||||||| || || |||||  ||||||||||||||  |||||||||||| |||||||| ||| |||||| |||  | ||| |||||||||    
T  40997460 ccgaaattggtactagggggaattgaacatgagacctttggaggagcaaactccaagatcccaagtcaaccactagacccacctcaaatgggt 40997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 716 - 784
Target Start/End: Complemental strand, 45271469 - 45271401
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    |||||||||||||||||||| ||||||||| ||||   ||| ||||||||  ||||||| |||||||||    
T  45271469 gaaattggcaccagagggaatcgaacatgaaacctctggagaagcaaactctaagatcccaagccaacc 45271401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 691 - 774
Target Start/End: Complemental strand, 18708587 - 18708504
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcc 774  Q
    |||||| ||||||||| ||||  | |||||||| | ||||||||  ||||| |||||||||||||||| || ||| ||||||||    
T  18708587 aaagctctgtatgaacatgcccactgaaattggtatcagagggagtcgaacctgagaccttgagaggaacacactccaagatcc 18708504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 714 - 784
Target Start/End: Complemental strand, 1191600 - 1191530
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    |||||||||| || |||||||| ||||| ||||||||   |||||||||||| |||||||  |||||||||    
T  1191600 ccgaaattggtactagagggaaacgaacctgagacctctggaggagcaaactccaagatctcaagccaacc 1191530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 783
Target Start/End: Original strand, 12517738 - 12517804
Alignment:
Q  718 aattggcaccagagggaaccgaacatgagaccttga-gaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||||| | ||| | ||||||||||||||| |||||||||||| |||| ||| ||||||||    
T  12517738 aattggcaccagggagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaac 12517804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 718 - 784
Target Start/End: Complemental strand, 13266573 - 13266507
Alignment:
Q  718 aattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    |||||||||||||| ||| ||||||||||||||  | ||||||||| | |||||||  |||||||||    
T  13266573 aattggcaccagagtgaatcgaacatgagacctctaaaggagcaaattccaagatctcaagccaacc 13266507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 754 - 807
Target Start/End: Original strand, 6714431 - 6714484
Alignment:
Q  754 gaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| |||||||  ||||||||||||||| ||| | ||||||||||    
T  6714431 gaggagcaaactccaagatctcaagccaaccattaggccaatcccaaatgggtt 6714484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 749 - 802
Target Start/End: Original strand, 38784324 - 38784377
Alignment:
Q  749 cttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaat 802  Q
    ||||||||||||||||| ||||||||||| |||| || ||| |||||| |||||    
T  38784324 cttgagaggagcaaactccaagatcctaacccaaacactagatcaaccccaaat 38784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 802
Target Start/End: Complemental strand, 41329927 - 41329842
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaat 802  Q
    ||||||||||||||||||| ||||  ||| |||||  ||||||||||||  ||||||| || | ||||| |||| ||||| |||||    
T  41329927 aaattggcaccagagggaatcgaatctgaaacctttggaggagcaaactctaagatcccaaactaaccactaggccaaccccaaat 41329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 4e-25; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 692 - 807
Target Start/End: Complemental strand, 32729654 - 32729539
Alignment:
Q  692 aagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggt 791  Q
    ||||| |||||| |||||||  ||||||||||||||| |||||| ||||| |||||| ||||||||||||||||  ||||||| |||||||||| ||||     
T  32729654 aagctctgtatggacttgcccaccgaaattggcaccatagggaatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggc 32729555  T
Q  792 caaccacaaatgggtt 807  Q
    ||||| ||||||||||    
T  32729554 caaccccaaatgggtt 32729539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 4621347 - 4621440
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  4621347 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 4621440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 7946931 - 7946838
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   ||||||||||||||||||||  |||||||||| |||||| ||| ||||||||||    
T  7946931 ccgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaacttcaagatctcaagccaaccactaggtcgaccccaaatgggtt 7946838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 24674480 - 24674387
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  24674480 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 24674387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 46607897 - 46607804
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||||| |||||||| ||| |||||| |||| ||||| ||||||||||    
T  46607897 ccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 46607804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 714 - 806
Target Start/End: Complemental strand, 24217065 - 24216973
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||||||||||| ||| || ||||| ||||||||||||||||||| ||| |||||||| ||| |||||| |||||||||| |||||||||    
T  24217065 ccgaaattggcaccaaaggtaatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaaccccaaatgggt 24216973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 7197356 - 7197449
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| ||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  7197356 ccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7197449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 8077734 - 8077641
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||| ||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  8077734 ccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 8077641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 698 - 795
Target Start/End: Original strand, 25237083 - 25237180
Alignment:
Q  698 tgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaac 795  Q
    |||||| |||||||  ||||||||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||| || | |||||||||| ||||    
T  25237083 tgtatggacttgcccaccgaaattggcactagagggaatcgaacctgagaccttgagagaagcaaactccaagatcccaaactaaccattaggccaac 25237180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 30677263 - 30677170
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| | ||| |||||||||  |||||||||||| | |||||| || ||||||| |||||||||| ||||||||||    
T  30677263 ccgaaattggcaccagagggaatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaatgggtt 30677170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 691 - 807
Target Start/End: Complemental strand, 1138689 - 1138573
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||| |||||| ||||| |  ||||||||||||| |||| ||  ||||| | ||||||||||||||||| ||| |||||||  |||||||||| ||||    
T  1138689 aaagctctgtatggacttgtccaccgaaattggcactagagagattcgaacctaagaccttgagaggagcacactccaagatctcaagccaaccactagg 1138590  T
Q  791 tcaaccacaaatgggtt 807  Q
    |||||| ||||||||||    
T  1138589 tcaaccccaaatgggtt 1138573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 715 - 806
Target Start/End: Complemental strand, 1486504 - 1486415
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    |||||||||||||| |||||| ||||| |||||||||||||| |||  ||| |||||||| |||||||||| |||||||||| |||||||||    
T  1486504 cgaaattggcaccaaagggaatcgaacctgagaccttgagagtagc--actccaagatcccaagccaaccactaggtcaaccccaaatgggt 1486415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 15059512 - 15059605
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||| ||| ||||| ||||||||   |||||||||||| |||||| | |||||||||| |||| ||||| ||||||||||    
T  15059512 ccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggtt 15059605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 783
Target Start/End: Original strand, 45859153 - 45859222
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||| |||||||| ||||||||    
T  45859153 ccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaac 45859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 692 - 807
Target Start/End: Complemental strand, 168311 - 168195
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||| ||||||||||| |||  |||||||||||||||||||||| ||||| |||||||||   | |||||||||  ||||||| |||||||||| ||||    
T  168311 aagctctgtatgaacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttgaaagagcaaactctaagatcccaagccaaccactagg 168212  T
Q  791 tcaaccacaaatgggtt 807  Q
     ||||  ||||||||||    
T  168211 ccaactccaaatgggtt 168195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 715 - 807
Target Start/End: Complemental strand, 21726815 - 21726723
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||| |||||| ||||| ||||||||   |||||||||||||||||| || ||  |||||| |||||||||| ||||||||||    
T  21726815 cgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaacttcaagaacccaaatcaaccactaggtcaacctcaaatgggtt 21726723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 715 - 807
Target Start/End: Original strand, 29057448 - 29057540
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| |||||||| ||||| |||||||||  ||| |||||||| |||||||| || ||||||| |||| ||||| ||||||||||    
T  29057448 cgaaattggcacaagagggaatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 29057540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 717 - 807
Target Start/End: Complemental strand, 34778426 - 34778336
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||| ||||||||||| | ||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  34778426 aaattggtaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34778336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 7766837 - 7766930
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||| ||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||| ||||| |||| ||||| | ||||||||    
T  7766837 ccgaaattagcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaaccccgaatgggtt 7766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 20487300 - 20487393
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| ||||||||  ||||||||| ||   ||||| ||||||||||    
T  20487300 ccgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgggtt 20487393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 803
Target Start/End: Complemental strand, 24122110 - 24122021
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||  |||||||| |||||||||| || | ||||| ||||||    
T  24122110 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaagccaaccccaaatg 24122021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 27454976 - 27455069
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| ||||| ||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||  ||||| ||||||||||    
T  27454976 ccgaaattggcatcagagtgaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 27455069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 714 - 802
Target Start/End: Original strand, 46113512 - 46113600
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaat 802  Q
    |||||||||| ||||||||||| ||||| ||||||||   |||||||||||| |||||||| || ||||||| |||| ||||| |||||    
T  46113512 ccgaaattggtaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 46113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 692 - 790
Target Start/End: Complemental strand, 7578519 - 7578420
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||||||||| |||| |||  ||||||||||||||| |||||| ||||| ||||||||   ||||| |||||| |||||||| |||||||||| ||||    
T  7578519 aagctttgtatggacttagcccaccgaaattggcaccatagggaatcgaacctgagacctctggaggaacaaactccaagatcccaagccaaccactagg 7578420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 714 - 809
Target Start/End: Original strand, 23232375 - 23232470
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttca 809  Q
    ||||||||||| |||||||||| ||||| ||| ||||   || |||||||||||||||||| ||| |||||| |||| ||| | ||||||||||||    
T  23232375 ccgaaattggcgccagagggaatcgaacctgaaacctctggaagagcaaacttcaagatcccaagtcaaccactaggccaatcccaaatgggttca 23232470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 700 - 795
Target Start/End: Original strand, 25496584 - 25496679
Alignment:
Q  700 tatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaac 795  Q
    |||||||||||   ||||||| ||||| |||||||| ||||| ||||||||| |||||||||| || |||||||| ||||||| || |||| ||||    
T  25496584 tatgaacttgctcaccgaaataggcactagagggaatcgaacttgagaccttaagaggagcaatctccaagatcccaagccaatcactaggccaac 25496679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 1378985 - 1378892
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| ||||||||| || |||||||||||| ||  |||||||||||| |||||||| ||| |||||| || | |||||  |||||||||    
T  1378985 ccgaaattgacaccagaggaaatcgaacatgagacttttggaggagcaaactccaagatcccaagtcaaccactaagccaaccttaaatgggtt 1378892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 18646940 - 18646847
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||| ||| ||||| ||||||||   ||| ||||||||  ||||||  |||||||||| |||||||||| ||||| ||||    
T  18646940 ccgaaattggcaccagagagaatcgaacctgagacctctggagaagcaaactcaaagatcacaagccaaccactaggtcaaccccaaataggtt 18646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 783
Target Start/End: Complemental strand, 39964599 - 39964530
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||| ||| |||| ||  ||||||||    
T  39964599 ccgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaaggtcgcaagccaac 39964530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 37351571 - 37351642
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    |||||||||||| |||| |||| ||||| |||||| ||  |||||||||||| |||||||| ||||||||||    
T  37351571 ccgaaattggcatcagaaggaatcgaacctgagacatttggaggagcaaactccaagatcccaagccaacca 37351642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 691 - 785
Target Start/End: Original strand, 19034473 - 19034567
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    |||||| |||||| |||||||  ||||||||||||||||||  || ||||| ||| |||||  ||||| |||||| |||||||| || |||||||    
T  19034473 aaagctctgtatggacttgcccaccgaaattggcaccagagataatcgaacctgaaaccttttgaggaacaaactccaagatcccaaaccaacca 19034567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 714 - 784
Target Start/End: Original strand, 33905620 - 33905690
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    |||||||||  ||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||    
T  33905620 ccgaaattgataccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 33905690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 782
Target Start/End: Original strand, 9500465 - 9500533
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagacct-tgagaggagcaaacttcaagatcctaagccaa 782  Q
    |||||||||||||||||| ||| ||||| |||||||| ||| ||||||||||| |||||||| |||||||    
T  9500465 ccgaaattggcaccagagagaatcgaacctgagacctctga-aggagcaaactccaagatcccaagccaa 9500533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 691 - 784
Target Start/End: Complemental strand, 16539718 - 16539625
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    |||||| |||||| |||||||  || ||||||||||||||||||| | ||| ||||||||||  ||||||  ||| |||||||| || ||||||    
T  16539718 aaagctctgtatggacttgcccaccaaaattggcaccagagggaatcaaacctgagaccttgcaaggagctcactccaagatcccaaaccaacc 16539625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 784
Target Start/End: Complemental strand, 4471101 - 4471033
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagagg-agcaaacttcaagatcctaagccaacc 784  Q
    |||||||||| |||| |||  ||||||||||| |||||||| ||||||||||||||||  |||||||||    
T  4471101 aaattggcacgagagagaattgaacatgagacattgagagggagcaaacttcaagatctcaagccaacc 4471033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 807
Target Start/End: Original strand, 14258538 - 14258630
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| ||||||||||| |||||  ||||| |   ||||| |||||| |||||||| |||||||||| |||| ||| | ||||||||||    
T  14258538 cgaaattggtaccagagggaatcgaaccagagacatctggaggaacaaactccaagatcccaagccaaccactaggccaagcccaaatgggtt 14258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 691 - 747
Target Start/End: Complemental strand, 16899613 - 16899557
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgaga 747  Q
    ||||||||||||| ||| |||  |||||||||||||||||||||| ||||| |||||    
T  16899613 aaagctttgtatggactggcccaccgaaattggcaccagagggaatcgaacctgaga 16899557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 774
Target Start/End: Original strand, 36155998 - 36156058
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcc 774  Q
    |||||||||||||||||||||| ||||| ||| ||||   |||||||||||| ||||||||    
T  36155998 ccgaaattggcaccagagggaatcgaacctgacacctctggaggagcaaactccaagatcc 36156058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 743 - 807
Target Start/End: Complemental strand, 36987621 - 36987558
Alignment:
Q  743 tgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||| ||| ||||||||| || |||||||||| || ||||||| ||||||||||    
T  36987621 tgagaccttgagaggtgcacacttcaagaccccaagccaaccactacgtcaacc-caaatgggtt 36987558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 17935856 - 17935785
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    ||||||||||||| ||| |||| ||||| ||||||||   |||||||||||| |||||||| ||| ||||||    
T  17935856 ccgaaattggcactagaaggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaacca 17935785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 2537785 - 2537698
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||| | |||| | ||| |||||||||||||||||||      ||||||| || ||||||| |||| ||||| ||||||||||    
T  2537785 ccgaaattggcaccaaatggaatcaaacctgagaccttgagaggagca------aagatcccaatccaaccactaggccaaccccaaatgggtt 2537698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 809
Target Start/End: Complemental strand, 26608243 - 26608174
Alignment:
Q  739 aacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttca 809  Q
    ||||||||||||||||||||||| | |||||||||| ||  |||||| |||| ||||| |||||| |||||    
T  26608243 aacatgagaccttgagaggagcacaattcaagatcc-aattcaaccactaggccaaccccaaatgagttca 26608174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 717 - 807
Target Start/End: Complemental strand, 34965413 - 34965323
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||| || ||||||||| ||||| ||||||  | ||||||||||   ||| |||||||||||  |||| ||||| ||||    
T  34965413 aaattggcaccagaggaaatcgaacatgaaaccttaagaggaatacacttcaagatttcaagtcaaccattaggcaaaccgcaaataggtt 34965323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 681 - 783
Target Start/End: Complemental strand, 37047112 - 37047010
Alignment:
Q  681 aagctcgagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagcc 780  Q
    ||||| ||| |||||| |||||| ||| |||  || ||||| | ||||| ||||| | ||| ||||||||||||||||||| ||| |||| ||| |||||    
T  37047112 aagctagagcaaagctctgtatggactagcccaccaaaatttgtaccagggggaatcaaacctgagaccttgagaggagcacactccaaggtcccaagcc 37047013  T
Q  781 aac 783  Q
    |||    
T  37047012 aac 37047010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 717 - 807
Target Start/End: Original strand, 40802180 - 40802270
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||  | ||| | ||||||||||||||||| ||||||||| ||| |||  ||||||||||  | | ||||| ||||||||||    
T  40802180 aaattggcaccatggagaatcaaacatgagaccttgagatgagcaaactccaatatctcaagccaaccacaaagccaaccccaaatgggtt 40802270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 803
Target Start/End: Complemental strand, 1378832 - 1378743
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||| ||||||||  || |||||||||||||||  |||||| ||||| |||||| | ||| |||||| |||  ||||| ||||||    
T  1378832 ccgaaattgacaccagagaaaatcgaacatgagacctttggaggagtaaactccaagattccaagtcaaccactagaccaaccccaaatg 1378743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 695 - 803
Target Start/End: Complemental strand, 2272451 - 2272342
Alignment:
Q  695 ctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtca 793  Q
    |||||||||||||| |||   ||||||||||| ||||||||| | ||| ||||||||    |||||||||||  ||||||| ||| |||||| |||| ||    
T  2272451 ctttgtatgaacttagcccagcgaaattggcatcagagggaatcaaacctgagacctctgtaggagcaaactctaagatcccaagtcaaccactaggcca 2272352  T
Q  794 accacaaatg 803  Q
    ||| ||||||    
T  2272351 accccaaatg 2272342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 783
Target Start/End: Complemental strand, 23734203 - 23734134
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||||| ||||||||| ||||| ||||||||   |||||||||| |  ||||||| ||||||||    
T  23734203 ccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaac 23734134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 783
Target Start/End: Complemental strand, 23741395 - 23741326
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||||| ||||||||| ||||| ||||||||   |||||||||| |  ||||||| ||||||||    
T  23741395 ccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaac 23741326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 714 - 808
Target Start/End: Original strand, 5192 - 5286
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  5192 ccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttc 5286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 714 - 808
Target Start/End: Original strand, 97476 - 97570
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  97476 ccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatgggttc 97570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 2e-24; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 714 - 808
Target Start/End: Complemental strand, 2751362 - 2751268
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  2751362 ccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttc 2751268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 11997940 - 11997847
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||| |||||||| |||||||||| |||  ||||||||||||||||    
T  11997940 ccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagcccaaccacaaatgggtt 11997847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 714 - 808
Target Start/End: Original strand, 7175972 - 7176066
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  7175972 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttc 7176066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 716 - 806
Target Start/End: Original strand, 7799944 - 7800034
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    |||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||||||||| |||||||||    
T  7799944 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatgggt 7800034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 7275368 - 7275275
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  7275368 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 7275275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 40543020 - 40543113
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  40543020 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 40543113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 714 - 808
Target Start/End: Original strand, 21217943 - 21218037
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||| ||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  21217943 ccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttc 21218037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 715 - 804
Target Start/End: Original strand, 12211646 - 12211735
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||||||||||||||| || | ||| ||||| ||||||||||||| ||| ||||||||||||||||||| |||| ||||| |||||||    
T  12211646 cgaaattggcaccagaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaaccccaaatgg 12211735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 803
Target Start/End: Complemental strand, 22119979 - 22119890
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||    
T  22119979 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 22119890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 714 - 806
Target Start/End: Complemental strand, 2103146 - 2103054
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||||||| |||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||    
T  2103146 ccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggt 2103054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 705 - 809
Target Start/End: Complemental strand, 28647069 - 28646965
Alignment:
Q  705 acttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||||  |||||||||||||||||||||| ||||| |||||||||||||| |||| ||| |||||||| ||| ||| || |||| ||||| ||||| |    
T  28647069 acttgcccaccgaaattggcaccagagggaatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccccaaatag 28646970  T
Q  805 gttca 809  Q
    |||||    
T  28646969 gttca 28646965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 691 - 806
Target Start/End: Original strand, 23330826 - 23330941
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||| |||||| |||||||  |||||||||||||| ||||||  ||||| ||||||||||||||||||| |||  || |||| |||||||||| ||||    
T  23330826 aaagctctgtatggacttgcccaccgaaattggcaccggagggagtcgaacctgagaccttgagaggagcacactctaaaatcccaagccaaccactagg 23330925  T
Q  791 tcaaccacaaatgggt 806  Q
      |||| |||||||||    
T  23330926 ctaaccccaaatgggt 23330941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 714 - 796
Target Start/End: Complemental strand, 21835242 - 21835160
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 796  Q
    |||||||||||||||||||||| ||||| ||||| ||   |||||||||||| |||||||| |||||||||| ||||||||||    
T  21835242 ccgaaattggcaccagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggtcaacc 21835160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 691 - 804
Target Start/End: Original strand, 8435782 - 8435895
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||||||||||| |||||||  ||||||||||||||||||| || ||||| | ||| ||| | ||||||||||| |||||||| ||| |||||| |||     
T  8435782 aaagctttgtatggacttgcccaccgaaattggcaccagaggaaatcgaacctaagatcttcaaaggagcaaactccaagatcccaagtcaaccactaga 8435881  T
Q  791 tcaaccacaaatgg 804  Q
     ||||| |||||||    
T  8435882 ccaaccccaaatgg 8435895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 10091279 - 10091186
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||| |||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||  ||||| ||||||||||    
T  10091279 ccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 10091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 18044198 - 18044105
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||| |||||||| ||||| || |||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  18044198 ccgaaattggcacaagagggaatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 18044105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 27009450 - 27009357
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||| | ||||| ||||||||   || ||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  27009450 ccgaaattggcaccagaggggatcgaacctgagacctctggatgagcaaactccaagatccgaagccaaccactaggccaaccccaaatgggtt 27009357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 714 - 790
Target Start/End: Complemental strand, 22299940 - 22299864
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| ||||    
T  22299940 ccgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactagg 22299864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 715 - 807
Target Start/End: Complemental strand, 27312242 - 27312150
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| |||||||| ||||| ||| ||||  ||||||||||||| |||||||| |||||||||| |||| ||||| ||||| ||||    
T  27312242 cgaaattggcactagagggaatcgaacctgaaacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaataggtt 27312150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 806
Target Start/End: Complemental strand, 19421321 - 19421230
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    |||||||| ||||||| | || ||||| ||||||||  ||||||||||||| |||||||| |||||||||| || ||||||| |||||||||    
T  19421321 cgaaattgacaccagaagaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaagtcaaccccaaatgggt 19421230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 716 - 807
Target Start/End: Original strand, 43785411 - 43785502
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||| |||| || ||||| ||||| |||||||||  ||||||||| ||  ||||||| ||||||||||||||||||||| ||||||||||    
T  43785411 gaaattagcacaagtgggaatcgaacttgagacctttggaggagcaatctcaaagatcccaagccaaccattaggtcaaccccaaatgggtt 43785502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 717 - 807
Target Start/End: Complemental strand, 2344387 - 2344297
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||| |||| ||||  ||||| |||  |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  2344387 aaattggcaccagaaggaatcgaatctgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 2344297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 714 - 796
Target Start/End: Complemental strand, 22696411 - 22696329
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 796  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||| ||| |||||||| ||  |||||| |||| |||||    
T  22696411 ccgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaacc 22696329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 692 - 785
Target Start/End: Complemental strand, 22703600 - 22703506
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    |||||||||||| |||| |||  ||||||||| |||||||||||| ||||| ||||||||   |||||||||||| |||||||| ||||||||||    
T  22703600 aagctttgtatggacttagcccaccgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacca 22703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 803
Target Start/End: Original strand, 13332533 - 13332622
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||||| |||||||||| || || ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||    
T  13332533 ccgaaattggctccagagggaatcgtacctgagacctcaggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 13332622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 17197060 - 17197153
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||  || ||||||| |||| | ||| ||||||||||    
T  17197060 ccgaaattggcaccagagggaatcgaacttgagacctatggaggagcaaactccaagatcgcaaaccaaccactaggccgaccccaaatgggtt 17197153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 17212144 - 17212051
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||| |||  |||| ||||||||   |||||||||||| |||||||| |||||||||| || | ||||| ||||||||||    
T  17212144 ccgaaattggcaccagagagaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccaaatgggtt 17212051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 691 - 806
Target Start/End: Original strand, 21574189 - 21574305
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagaggg-aaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattag 789  Q
    |||||| |||||| |||||||  ||||| ||||||||| |||| || ||||| || |||||||||||||||| ||| ||| |||| || ||||||| |||    
T  21574189 aaagctctgtatggacttgcccaccgaagttggcaccaaaggggaatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccactag 21574288  T
Q  790 gtcaaccacaaatgggt 806  Q
    | ||||| |||||||||    
T  21574289 gccaaccccaaatgggt 21574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 715 - 807
Target Start/End: Original strand, 42913624 - 42913716
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||| | | || ||||| ||||||||  ||||||||||||| |||||||| |||||||||| |||| |||||  |||||||||    
T  42913624 cgaaattggcaccatatgaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccgaaaatgggtt 42913716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 724 - 807
Target Start/End: Original strand, 22264622 - 22264705
Alignment:
Q  724 caccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| ||||  ||||||||||||||||||||||| |||||| | || |||||| || || ||||| ||||||||||    
T  22264622 caccagagggaatcgaatctgagaccttgagaggagcaaactccaagattccaaaccaacccttcggccaaccccaaatgggtt 22264705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 785
Target Start/End: Complemental strand, 42814978 - 42814884
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    |||||||||||| |||| |||  ||||||||| |||||||||||| ||||| |||||| |  ||||||||||||| |||||||| ||| ||||||    
T  42814978 aagctttgtatggacttagcccaccgaaattgacaccagagggaatcgaacctgagacttcaagaggagcaaactccaagatcccaagtcaacca 42814884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 738 - 783
Target Start/End: Original strand, 19612645 - 19612690
Alignment:
Q  738 gaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||    
T  19612645 gaacatgagaccttgagaggagcacacttcaagatcccaagccaac 19612690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 39145762 - 39145855
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||| |||||| |||||   |||| |   |||||||||||| |||||||| ||| |||||| |||||||||| ||||||||||    
T  39145762 ccgaaattggcaccacagggaatcgaaccgaagacatctggaggagcaaactccaagatcccaagtcaaccactaggtcaacctcaaatgggtt 39145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 808
Target Start/End: Complemental strand, 40332189 - 40332096
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||| ||||||||| || ||||| ||||||||| ||||||||||||| ||||||   |||||||||| |||  ||||  |||||||||||    
T  40332189 cgaaattgacaccagaggaaatcgaacctgagacctttagaggagcaaactccaagatttcaagccaaccactagaccaactccaaatgggttc 40332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 688 - 803
Target Start/End: Complemental strand, 1469229 - 1469114
Alignment:
Q  688 agtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccatt 787  Q
    |||||||||||||||| |||||||   |||||||||||  | ||| || ||||| ||||||||||||| || |||||| ||||||   ||| |||||| |    
T  1469229 agtaaagctttgtatggacttgcccatcgaaattggcattaaaggaaatcgaacctgagaccttgagatgaacaaactccaagatttcaagtcaaccact 1469130  T
Q  788 aggtcaaccacaaatg 803  Q
    ||| ||||| ||||||    
T  1469129 aggccaaccccaaatg 1469114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 737 - 807
Target Start/End: Complemental strand, 23854464 - 23854394
Alignment:
Q  737 cgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  23854464 cgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 23854394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 714 - 804
Target Start/End: Complemental strand, 28089907 - 28089817
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    ||||||||| |||||||||| | ||||| |||||| |   |||||||||||| |||||||  |||||||||| |||| ||||| |||||||    
T  28089907 ccgaaattgacaccagagggtatcgaacctgagacatctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgg 28089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 763
Target Start/End: Original strand, 654814 - 654863
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaa 763  Q
    |||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  654814 ccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaa 654863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 715 - 804
Target Start/End: Original strand, 9718098 - 9718187
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||||| |||||||||||| ||||| |||||| ||  |||||||||||| ||| |||  | |||||||| |||| ||||| |||||||    
T  9718098 cgaaattgacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacctcaaatgg 9718187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 780
Target Start/End: Original strand, 29785285 - 29785349
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttga-gaggagcaaacttcaagatcctaagcc 780  Q
    ||||||||||||||  ||| ||||||||||||||||| |||||||| ||||| |||||| |||||    
T  29785285 aaattggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcc 29785349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 719 - 807
Target Start/End: Original strand, 31713010 - 31713098
Alignment:
Q  719 attggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||| || | | | ||||||||   |||||||||||| |||||||| || ||||||| |||| ||||| ||||||||||    
T  31713010 attggcaccagaggaaatcaatcctgagacctctcgaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 31713098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 803
Target Start/End: Original strand, 3950901 - 3950988
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcct-aagccaaccattaggtcaaccacaaatg 803  Q
    ||||| |||||| |||||| |||||||||||| ||||||||||||  || |||||| || |||||||||| |||  ||||| ||||||    
T  3950901 aaattagcaccaaagggaatcgaacatgagacattgagaggagcacgctccaagattctcaagccaaccactagaccaaccccaaatg 3950988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 27704093 - 27704022
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    ||||||||||||||| ||| || ||||| ||||||||    |||||||||||||||||||  ||||||||||    
T  27704093 ccgaaattggcaccaaaggaaatcgaacctgagacctctgtaggagcaaacttcaagatctcaagccaacca 27704022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 22638383 - 22638290
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||| ||||||||||||| ||||| |||||||||   | |||||||||  ||||||  ||| |||||| |||  ||||| ||||||||||    
T  22638383 ccgaaattagcaccagagggaatcgaacctgagacctttgaaagagcaaactctaagatctcaagtcaaccactagaccaaccccaaatgggtt 22638290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 754 - 803
Target Start/End: Complemental strand, 28003887 - 28003838
Alignment:
Q  754 gaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    |||||||||||| |||||||| |||||||||| ||| |||||| ||||||    
T  28003887 gaggagcaaactccaagatcccaagccaaccactagatcaaccccaaatg 28003838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 2e-24; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 714 - 808
Target Start/End: Original strand, 15360208 - 15360302
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| |||||||||||    
T  15360208 ccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttc 15360302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 698 - 807
Target Start/End: Complemental strand, 9208355 - 9208246
Alignment:
Q  698 tgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacca 797  Q
    |||||| |||||||  |||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||  |||||     
T  9208355 tgtatggacttgcccaccgaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaaccc 9208256  T
Q  798 caaatgggtt 807  Q
    ||||||||||    
T  9208255 caaatgggtt 9208246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 9239062 - 9238969
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  9239062 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 9238969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 691 - 807
Target Start/End: Complemental strand, 33499585 - 33499468
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaacc-gaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattag 789  Q
    |||| |||||||| ||| |||  ||||||||| |||||||||||| | |||| ||||||||||||||||||||||| |||||||| ||||||||||  ||    
T  33499585 aaagatttgtatggactagcccaccgaaattgacaccagagggaatctgaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccag 33499486  T
Q  790 gtcaaccacaaatgggtt 807  Q
    | ||||| ||||||||||    
T  33499485 gccaaccccaaatgggtt 33499468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 716 - 807
Target Start/End: Complemental strand, 12591722 - 12591631
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||| |||||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  12591722 gaaattggcacgagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 12591631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 3222745 - 3222837
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  3222745 ccgaaattggcaccagagggaatcgaacctgagacctct-gaggagcaaactgcaagatcccaagccaaccactaggccaaccccaaatgggtt 3222837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 698 - 785
Target Start/End: Original strand, 17149550 - 17149637
Alignment:
Q  698 tgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    |||||| |||||||  |||||||| ||||||||||||| ||||| ||||||||||||||||||| ||| |||||||| || |||||||    
T  17149550 tgtatggacttgccaaccgaaattagcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaaaccaacca 17149637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 717 - 803
Target Start/End: Complemental strand, 14212976 - 14212890
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||||||||||||| ||||| ||||||||   |||||||||||| ||||||||  |||||||||||||||||| | ||||||    
T  14212976 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccgagccaaccattaggtcaatcccaaatg 14212890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 13753327 - 13753234
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||| |||  |||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  13753327 ccgaaattggcaccagagagaattgaacctgagacctctggaggagcaaactccaagatccaaagccaaccactaggccaaccccaaatgggtt 13753234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 718 - 807
Target Start/End: Complemental strand, 22576150 - 22576061
Alignment:
Q  718 aattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||| ||||  ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  22576150 aattggcaccagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 22576061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 34147433 - 34147340
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| |||||| |   || ||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  34147433 ccgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34147340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 34160049 - 34159956
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| |||||| |   || ||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  34160049 ccgaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34159956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 692 - 807
Target Start/End: Complemental strand, 11007275 - 11007159
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||||||||| |||| |||  |||||||||  | ||||| ||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||     
T  11007275 aagctttgtatggacttagcccaccgaaattgagagcagagtgaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaga 11007176  T
Q  791 tcaaccacaaatgggtt 807  Q
    |||||| ||||||||||    
T  11007175 tcaaccccaaatgggtt 11007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 714 - 801
Target Start/End: Complemental strand, 11448958 - 11448871
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaa 801  Q
    |||||||||||||||||| ||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||    
T  11448958 ccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 654256 - 654349
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| ||| || ||| |||| ||| | ||||||||||    
T  654256 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcagccactaggccaaacccaaatgggtt 654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 716 - 805
Target Start/End: Original strand, 21982432 - 21982521
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatggg 805  Q
    |||||||||||||  ||||| ||||| | ||||||   ||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  21982432 gaaattggcaccatcgggaatcgaacctcagacctctggaggagcaaacttcaagatcccaagccaaccactaggccaaccccaaatggg 21982521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 804
Target Start/End: Complemental strand, 1345045 - 1344934
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||||||||| |||| |||  | |||||||||||||||||||| ||||| ||||||||   ||||| |||||| |||||||| |  ||||||| ||||    
T  1345045 aagctttgtatggacttagcccactgaaattggcaccagagggaatcgaacctgagacctctggaggaacaaactccaagatccca--ccaaccactagg 1344948  T
Q  791 tcaaccacaaatgg 804  Q
    |||||| |||||||    
T  1344947 tcaaccccaaatgg 1344934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 807
Target Start/End: Complemental strand, 28672151 - 28672061
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||| |||||||||||| ||||| | ||||||  ||||||||||||| |||||||  ||| |||||| |||| ||||| ||||||||||    
T  28672151 aaattgacaccagagggaatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 28672061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 17081164 - 17081257
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| |||||||||||| | ||| |||||| |   |||||||||||| ||||||||||||||||||| |||   |||| ||||||||||    
T  17081164 ccgaaattgacaccagagggaatcaaacttgagacatctggaggagcaaactccaagatcctaagccaaccactagactaacctcaaatgggtt 17081257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 783
Target Start/End: Complemental strand, 10377825 - 10377733
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    |||||| |||||| |||||||  ||||||||||||||| ||||||  |||| ||||||||||| | ||||| ||| |||||||  ||||||||    
T  10377825 aaagctatgtatggacttgcccaccgaaattggcaccatagggaattgaacctgagaccttgacatgagcacactccaagatctcaagccaac 10377733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 717 - 804
Target Start/End: Complemental strand, 9844022 - 9843935
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||| ||||||||| |  ||||| ||||||||  ||||||||||||| |||||||| |||||||||| |||  ||||| |||||||    
T  9844022 aaattgacaccagaggaagtcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 9843935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 714 - 808
Target Start/End: Original strand, 5360181 - 5360275
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    ||||||||||||  |||||||| ||||| ||||||||   ||| |||||||| |||||||| ||||||||||  ||| ||||  |||||||||||    
T  5360181 ccgaaattggcattagagggaatcgaacctgagacctcttgagaagcaaactccaagatcccaagccaaccaccaggccaactccaaatgggttc 5360275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 770
Target Start/End: Original strand, 6691532 - 6691588
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaag 770  Q
    |||||||||||||| ||| ||| ||||| ||||||||||||||||||| ||| ||||    
T  6691532 ccgaaattggcaccggagagaatcgaacctgagaccttgagaggagcacactccaag 6691588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 796
Target Start/End: Complemental strand, 3907625 - 3907546
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 796  Q
    ||||||||||||||| ||| ||||| ||| | ||||||||||||| ||  |||||||| || ||||||| ||| ||||||    
T  3907625 aaattggcaccagagagaatcgaacttgaaatcttgagaggagcacaccccaagatcccaaaccaaccactagatcaacc 3907546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 761
Target Start/End: Complemental strand, 9583460 - 9583413
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagca 761  Q
    |||||||||||||||||| ||| |||||  ||||||||||||||||||    
T  9583460 ccgaaattggcaccagagagaatcgaactggagaccttgagaggagca 9583413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 715 - 760
Target Start/End: Complemental strand, 28028623 - 28028578
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagc 760  Q
    ||||||||||| ||| | ||| ||||||||||||||||||||||||    
T  28028623 cgaaattggcatcagggagaatcgaacatgagaccttgagaggagc 28028578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 2e-24; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 691 - 805
Target Start/End: Original strand, 19145498 - 19145612
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||| |||||| |||||||  |||||||||||||||||||||| |||||  |||||||||||||||||| ||| |||||||| ||| |||||| ||||    
T  19145498 aaagctctgtatggacttgcccaccgaaattggcaccagagggaatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactagg 19145597  T
Q  791 tcaaccacaaatggg 805  Q
     ||||| ||||||||    
T  19145598 ccaaccccaaatggg 19145612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 27498841 - 27498934
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||| |||||| | |||||||||| |||||||||| ||||||||||    
T  27498841 ccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactaggtcaaccccaaatgggtt 27498934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 811
Target Start/End: Complemental strand, 25587019 - 25586922
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttcagt 811  Q
    ||||||||||||||||||| || ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||||||    
T  25587019 ccgaaattggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggttcagt 25586922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 31288056 - 31288149
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||| |||||| |||||||||||||||  |||||||||||| |||||||| |||||||||| |||| |||||  |||||||||    
T  31288056 ccgaaattggcaccaaagggaatcgaacatgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacccaaaatgggtt 31288149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 32059550 - 32059643
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||||| |||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  32059550 ccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 32059643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 678 - 807
Target Start/End: Complemental strand, 36895548 - 36895419
Alignment:
Q  678 tctaagctcgagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaa 777  Q
    |||||||  ||| ||||||||||||| ||||| |  |||||||||| ||||||||||| ||||||||| ||||||||||||||| ||| |||||||| ||    
T  36895548 tctaagccagagcaaagctttgtatggacttgaccaccgaaattggtaccagagggaatcgaacatgaaaccttgagaggagcacactccaagatcccaa 36895449  T
Q  778 gccaaccattaggtcaaccacaaatgggtt 807  Q
    || || || || ||||| | ||||||||||    
T  36895448 gctaatcactacgtcaatctcaaatgggtt 36895419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 692 - 804
Target Start/End: Original strand, 8484748 - 8484861
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||| ||||||||||| |||  |||||||||||||||||||||| | ||| ||||||||   |||||||||||| |||||||| |||||||||| ||||    
T  8484748 aagctctgtatgaacttagcccaccgaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagg 8484847  T
Q  791 tcaaccacaaatgg 804  Q
     ||||| |||||||    
T  8484848 ccaaccccaaatgg 8484861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 33709611 - 33709703
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  33709611 ccgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc-caaatgggtt 33709703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 717 - 807
Target Start/End: Original strand, 13038567 - 13038657
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| || ||||||| |||| ||||| ||||||||||    
T  13038567 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 13038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 717 - 807
Target Start/End: Original strand, 13108562 - 13108652
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||||||| ||||| ||||| ||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  13108562 aaattggcaccagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 13108652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 1827640 - 1827733
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||| | ||||||||| ||||| ||||||||   |||||||||||| |||||||  |||||||||| |||||||||| ||||||||||    
T  1827640 ccgaaattggtatcagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgggtt 1827733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 715 - 804
Target Start/End: Complemental strand, 4603863 - 4603774
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||||||||||||| |||| ||||| ||||| |||  |||||||||||| |||||||| |||||||||| |||| ||||| |||||||    
T  4603863 cgaaattggcaccagaaggaatcgaacttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 4603774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 11926612 - 11926705
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| | ||| ||||||||   |||||||||||| |||||||| || ||||||| |||| ||||| ||||||||||    
T  11926612 ccgaaattggcaccagagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 11926705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 15641215 - 15641308
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||| |||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| ||||  |||| ||||||||||    
T  15641215 ccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaatgggtt 15641308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 713 - 806
Target Start/End: Complemental strand, 36954906 - 36954813
Alignment:
Q  713 gccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||||| | ||||||||||| ||||| ||||||||  ||||||||||||| |||||||| ||| |||||| |||| ||||| |||||||||    
T  36954906 gccgaaattagaaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaaggcaaccactaggccaaccccaaatgggt 36954813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 715 - 804
Target Start/End: Original strand, 38631072 - 38631161
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    ||||||||||||||||||||| ||||  ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||    
T  38631072 cgaaattggcaccagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 38631161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 717 - 807
Target Start/End: Complemental strand, 34310226 - 34310136
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||| | ||||| |||| |||| ||||| ||||||||||    
T  34310226 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagattccaagccgaccactaggccaaccccaaatgggtt 34310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 23270632 - 23270725
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| | |||| || ||||| |||||||||  || ||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  23270632 ccgaaattggcatcggaggaaatcgaacttgagacctttggatgagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 23270725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 38684295 - 38684202
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| ||| |||||| | || ||||| ||| ||||||    
T  38684295 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaaccccaagtgggtt 38684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 727 - 807
Target Start/End: Complemental strand, 22392775 - 22392695
Alignment:
Q  727 cagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  22392775 cagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 22392695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 714 - 808
Target Start/End: Complemental strand, 15931146 - 15931052
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagacct-tgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| |||||| | ||| || |||||||| |||||||| |||| ||||| |||| ||||| |||||||||||    
T  15931146 ccgaaattggcaccagagggaatcgaacctgagacttgtga-agaagcaaactccaagatcccaagctaaccactaggccaaccccaaatgggttc 15931052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 717 - 792
Target Start/End: Complemental strand, 37495131 - 37495056
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtc 792  Q
    ||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||  |||||||||| ||||||    
T  37495131 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggtc 37495056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 714 - 784
Target Start/End: Original strand, 12398558 - 12398628
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||||||| ||||| |||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||    
T  12398558 ccgaaattgacaccatagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 12398628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 804
Target Start/End: Complemental strand, 8780564 - 8780475
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||||| ||| ||||  || ||||| ||||||||||||||||||| ||| |||||||| | | |||||| |||||||||| |||||||    
T  8780564 cgaaattgacacaagagacaatcgaacctgagaccttgagaggagcacactccaagatccgatgtcaaccactaggtcaacctcaaatgg 8780475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 715 - 806
Target Start/End: Complemental strand, 40330719 - 40330628
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||| |||||| || |||  |||| ||||||||||||||||||||||| |||||||  |||| ||||| || | ||||| |||||||||    
T  40330719 cgaaattagcaccatagagaattgaacttgagaccttgagaggagcaaactccaagatctcaagctaaccactaagccaacctcaaatgggt 40330628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 714 - 784
Target Start/End: Original strand, 19456320 - 19456389
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||||||||||||||||||| | |||| ||||||||   |||||||||||| |||||||| |||||||||    
T  19456320 ccgaaattggcaccagagggatc-gaacctgagacctctggaggagcaaactccaagatcccaagccaacc 19456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 30485915 - 30485822
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagacct-tgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| |||||||| ||| ||||| |||||||| ||| ||||||||||| |||||||| |||||||||  | || ||||| ||||||||||    
T  30485915 ccgaaattgacaccagagtgaatcgaacctgagacctctga-aggagcaaactccaagatcccaagccaaccgctgggccaaccccaaatgggtt 30485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 804
Target Start/End: Original strand, 930572 - 930685
Alignment:
Q  692 aagctttgtatgaacttgcctgccgaaattggcacca-gagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||| |||||||| ||| |  ||||||||||||||| | ||||| ||||| |||||| ||||||||||||||||  || |||  |||||||||| | ||    
T  930572 aagctatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaacctgagactttgagaggagcaaactctaaaatctcaagccaaccactggg 930671  T
Q  791 tcaaccacaaatgg 804  Q
     ||||| |||||||    
T  930672 ccaaccccaaatgg 930685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 12317260 - 12317353
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| ||||||| | || | |||  |||||||  ||||||||||||| |||||| | |||||||||| |||| ||||| ||||||||||    
T  12317260 ccgaaattgacaccagatgaaatcaaacccgagacctcaagaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgggtt 12317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 807
Target Start/End: Complemental strand, 5049223 - 5049131
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| |||||||||||  |||  ||||||||| |||  ||||||||||||||| | ||  ||| ||||| ||||||| ||||||||||    
T  5049223 cgaaattggtaccagagggaattgaatctgagacctttagaaaagcaaacttcaagattccaaatcaatcattaagtcaaccccaaatgggtt 5049131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 692 - 807
Target Start/End: Original strand, 11464994 - 11465110
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||| ||||||||||| |||  || |||||||||||||||| || ||||| |||||| ||  |||||||||||| ||||||   ||||||| || ||||    
T  11464994 aagctctgtatgaacttagcccaccaaaattggcaccagaggaaatcgaacctgagacatttggaggagcaaactccaagatttcaagccaatcactagg 11465093  T
Q  791 tcaaccacaaatgggtt 807  Q
     |||||  |||||||||    
T  11465094 ccaacccgaaatgggtt 11465110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 774
Target Start/End: Complemental strand, 18207294 - 18207234
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcc 774  Q
    |||||||||||||| ||||||| ||||| ||||||||   |||||||||||| ||||||||    
T  18207294 ccgaaattggcaccggagggaatcgaacctgagacctctggaggagcaaactccaagatcc 18207234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 773
Target Start/End: Original strand, 10869675 - 10869734
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatc 773  Q
    |||||||||| |||||| |||| ||||| |||||||||  |||||||||||| |||||||    
T  10869675 ccgaaattggaaccagatggaatcgaacctgagacctttggaggagcaaactccaagatc 10869734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 754 - 809
Target Start/End: Complemental strand, 12647787 - 12647732
Alignment:
Q  754 gaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttca 809  Q
    |||||| |||||  |||||||||| ||||||| |||||||||| ||||||||||||    
T  12647787 gaggagtaaactcaaagatcctaaaccaaccactaggtcaacctcaaatgggttca 12647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 15971232 - 15971303
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    ||||||||| || |||||| || ||||| ||||||||   |||||||||||| |||||||| ||||||||||    
T  15971232 ccgaaattgacatcagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacca 15971303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 731 - 784
Target Start/End: Original strand, 15485418 - 15485471
Alignment:
Q  731 gggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||| ||||| ||||||||||||||||||| ||| |||| ||| |||||||||    
T  15485418 gggaatcgaacctgagaccttgagaggagcacactccaaggtcccaagccaacc 15485471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 804
Target Start/End: Original strand, 25750719 - 25750811
Alignment:
Q  714 ccgaaattggcaccagagggaac--cgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    ||||||||||||||||| ||||   | ||| ||||||||   |||||||||||| |||||||| ||| |||||| |||| ||||| |||||||    
T  25750719 ccgaaattggcaccagaaggaatatccaacttgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 25750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 42193572 - 42193479
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| |||||| || ||||| ||||||||   | | |||||||| |||||||| ||| |||||| |||| |||| | |||||||||    
T  42193572 ccgaaattggcatcagaggaaatcgaacctgagacctctggggaagcaaactccaagatcccaagtcaaccactaggccaacaataaatgggtt 42193479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 3e-23; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 687 - 807
Target Start/End: Original strand, 4252479 - 4252599
Alignment:
Q  687 gagtaaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccat 786  Q
    ||||||||||||||||| |||||    | |||||||||||||||||||| | ||| ||||||||||||||||||| ||| |||||||  ||||||||||     
T  4252479 gagtaaagctttgtatggacttgatcactgaaattggcaccagagggaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccac 4252578  T
Q  787 taggtcaaccacaaatgggtt 807  Q
    |||| ||||| ||||||||||    
T  4252579 taggccaaccccaaatgggtt 4252599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 717 - 807
Target Start/End: Original strand, 31537951 - 31538041
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||||||| | ||||||||||||   |||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||    
T  31537951 aaattggcaccagagggaatcaaacatgagacctctggaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggtt 31538041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 30807263 - 30807356
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  30807263 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 30807356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 35492998 - 35492905
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  35492998 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 35492905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 715 - 807
Target Start/End: Complemental strand, 30257710 - 30257618
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||| |||||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  30257710 cgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 30257618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 715 - 807
Target Start/End: Original strand, 34492686 - 34492778
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||| ||||||||| ||||||||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  34492686 cgaaattggcagcagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 34492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 714 - 809
Target Start/End: Original strand, 40133559 - 40133654
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttca 809  Q
    ||||||||| |||||||||||| ||||| |||||||||  |||||||||||| ||| |||| |||||||||| |||| ||||| ||||||||||||    
T  40133559 ccgaaattgacaccagagggaatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaatgggttca 40133654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 716 - 807
Target Start/End: Complemental strand, 46576433 - 46576342
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  46576433 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 46576342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 700 - 807
Target Start/End: Original strand, 55371381 - 55371488
Alignment:
Q  700 tatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccaca 799  Q
    |||||||||| | |||||||||||||||| |||||| |||||||||||||||||||| |||| ||| ||| |||  |||||||||| |||| ||||| ||    
T  55371381 tatgaacttgtccgccgaaattggcaccaaagggaatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacctca 55371480  T
Q  800 aatgggtt 807  Q
    ||| ||||    
T  55371481 aataggtt 55371488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 8456260 - 8456353
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   ||||||||||||  ||||||| |||||||||| |||| ||||| ||||||||||    
T  8456260 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgggtt 8456353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 40940912 - 40940819
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||  ||||| ||||||||||    
T  40940912 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 40940819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 48977475 - 48977382
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||||||| |||| ||||| |||||||||  |||||||||||| |||||||| ||| |||||| |||| ||||| ||||||||||    
T  48977475 ccgaaattggcaccagaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 48977382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 692 - 807
Target Start/End: Complemental strand, 21363053 - 21362937
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||| |||||| |||| |||| ||||||||| |||||||||||| ||||| ||||||||   |||||||||||| |||||||| ||| |||||| ||||    
T  21363053 aagctctgtatggacttagcctaccgaaattgacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactagg 21362954  T
Q  791 tcaaccacaaatgggtt 807  Q
     ||||| ||||||||||    
T  21362953 ccaaccccaaatgggtt 21362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 715 - 807
Target Start/End: Original strand, 45529865 - 45529957
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||| |||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||||    
T  45529865 cgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgggtt 45529957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 714 - 809
Target Start/End: Original strand, 7485635 - 7485730
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttca 809  Q
    |||||||||||| ||||||||| ||||| |||||||||  |||||||||||| |||||||| ||| |||||| || | ||||| ||||||||||||    
T  7485635 ccgaaattggcatcagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactatgccaaccccaaatgggttca 7485730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 738 - 809
Target Start/End: Complemental strand, 36660833 - 36660762
Alignment:
Q  738 gaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttca 809  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||||| |||||    
T  36660833 gaacctgagaccttgagaggagcaaactccaagatcctaaaccaaccactaggtcaaccccaaatgcgttca 36660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 714 - 805
Target Start/End: Original strand, 53424286 - 53424377
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatggg 805  Q
    ||||||||||||||| |||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||||    
T  53424286 ccgaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggg 53424377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 25289824 - 25289917
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||| |||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||  ||||| ||||||||||    
T  25289824 ccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgggtt 25289917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 49258372 - 49258465
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||| |||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| ||||  |||| ||||||||||    
T  49258372 ccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaaccactaggcaaaccccaaatgggtt 49258465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 717 - 806
Target Start/End: Original strand, 52455762 - 52455851
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    ||||||||||||||||||| ||||| ||||||||   |||||||||||| ||||||||  ||||||||| |||| ||||| |||||||||    
T  52455762 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccctagccaaccactaggccaaccccaaatgggt 52455851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 714 - 790
Target Start/End: Complemental strand, 26108379 - 26108303
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| ||||    
T  26108379 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagg 26108303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 715 - 807
Target Start/End: Complemental strand, 50583078 - 50582986
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||| |||||| || ||||| ||| ||||| ||||||||||||| |||||||| || ||||||| |||| ||||| ||||||||||    
T  50583078 cgaaattggcaacagaggaaatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgggtt 50582986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 691 - 806
Target Start/End: Original strand, 51390926 - 51391041
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||||||||||  |||| || ||||||||||||| ||||||||  |||  ||||| |||||||||||||||||  ||||||  |||||||||| ||||    
T  51390926 aaagctttgtatgggcttgtctaccgaaattggcacaagagggaattgaaattgagatcttgagaggagcaaactctaagatctcaagccaaccactagg 51391025  T
Q  791 tcaaccacaaatgggt 806  Q
     || || |||||||||    
T  51391026 acagcctcaaatgggt 51391041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 692 - 809
Target Start/End: Original strand, 7470302 - 7470420
Alignment:
Q  692 aagctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    ||||| ||||||||||| |||  ||||||||||||  |||||||| ||||| |||||||||  |||||||||||| |||||||  ||| |||||| ||||    
T  7470302 aagctctgtatgaacttagcccaccgaaattggcattagagggaatcgaacctgagacctttggaggagcaaactccaagatctcaagtcaaccactagg 7470401  T
Q  791 tcaaccacaaatgggttca 809  Q
      |||| ||||||||||||    
T  7470402 caaaccccaaatgggttca 7470420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 15566609 - 15566701
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||| |||||||| ||||| ||||||||   |||||||||||| |||||||  |||||||||| |||| ||||| ||||||||||    
T  15566609 ccgaaattggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaacc-caaatgggtt 15566701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 795
Target Start/End: Complemental strand, 26174200 - 26174119
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaac 795  Q
    ||||||||||||||||||| || ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||    
T  26174200 ccgaaattggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 26174119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 29915379 - 29915472
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||| |||||||||| | || ||||| ||||||||   |||||||||||| |||||||| ||| |||||||||||||||||  |||||||||    
T  29915379 ccgaaaatggcaccagaagaaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtt 29915472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 29964532 - 29964625
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||| |||||||||| | || ||||| ||||||||   |||||||||||| |||||||| ||| |||||||||||||||||  |||||||||    
T  29964532 ccgaaaatggcaccagaagaaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaaccctaaatgggtt 29964625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 45272526 - 45272619
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||  |||||| |   |||||||||||| |||||||| |||||||| | |||| ||||| ||||||||||    
T  45272526 ccgaaattggcaccagagggaatcgaaactgagacatctggaggagcaaactccaagatcccaagccaacgactaggccaaccccaaatgggtt 45272619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 795
Target Start/End: Original strand, 52821745 - 52821826
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaac 795  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| ||| |||||| |||| ||||    
T  52821745 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaac 52821826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 714 - 802
Target Start/End: Complemental strand, 25379848 - 25379760
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaat 802  Q
    ||||||||||||| ||| |||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||    
T  25379848 ccgaaattggcactagaaggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 25379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 803
Target Start/End: Original strand, 6041782 - 6041871
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||||||| || || || |||||||||  |||||||||||||||||| ||||||   ||| ||||||||||| ||||| ||||||    
T  6041782 ccgaaattggcactaggggcaatcgaacatgactccttgagaggagcaaactccaagatttcaagtcaaccattagggcaaccccaaatg 6041871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 18176997 - 18177090
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||| ||||   || ||||||||| |||||||  ||| |||||| |||| ||||| ||||||||||    
T  18176997 ccgaaattggcaccagagggaatcgaacctgatacctctggaagagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgggtt 18177090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 53234020 - 53234091
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacca 785  Q
    |||||||||||||||||| ||| ||||| |||||| |   |||||||||||| |||||||| ||||||||||    
T  53234020 ccgaaattggcaccagagagaatcgaacctgagacttctggaggagcaaactccaagatcccaagccaacca 53234091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 693 - 806
Target Start/End: Complemental strand, 16140405 - 16140292
Alignment:
Q  693 agctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtc 792  Q
    |||||| |||| |||||||  || |||||| ||| ||||  || |||||||||||| ||||||||||||| || |||||||| || | || || |||| |    
T  16140405 agctttatatggacttgcccaccaaaattgacactagagaaaatcgaacatgagactttgagaggagcaagctccaagatcccaaactaatcactaggcc 16140306  T
Q  793 aaccacaaatgggt 806  Q
    |||| |||||||||    
T  16140305 aaccccaaatgggt 16140292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 783
Target Start/End: Complemental strand, 26158905 - 26158836
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    ||||||||||||||| ||||||   ||| ||||||||||||||||||| ||| |||||||  ||||||||    
T  26158905 ccgaaattggcaccaaagggaatgaaacctgagaccttgagaggagcacactccaagatctcaagccaac 26158836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 32151511 - 32151419
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||| |||| ||| ||||  ||| |||||  |||||||||||| |||||||| ||| |||||| |||| ||||| ||||||||||    
T  32151511 ccgaaattggcactagagagaatcgaatttgaaacctttggaggagcaaactccaagatcccaagtcaaccactaggccaacc-caaatgggtt 32151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 779
Target Start/End: Original strand, 39041962 - 39042027
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagc 779  Q
    |||||||||||||||||| ||| ||||| ||||||||   |||||||||||| |||||||| ||||    
T  39041962 ccgaaattggcaccagagagaatcgaacttgagacctctggaggagcaaactccaagatcccaagc 39042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 717 - 806
Target Start/End: Complemental strand, 50162127 - 50162038
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    |||||||||  |||||||| ||||  ||||||||||||||||||  |||||||||||| ||| |||||| |  ||||| | |||||||||    
T  50162127 aaattggcaatagagggaatcgaatctgagaccttgagaggagcgcacttcaagatcccaagtcaaccacttagtcaaacccaaatgggt 50162038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 51532876 - 51532783
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||  |||| ||| |||||||||||||||  ||| |||||||| ||| |||  || ||||| | |||||||||| ||||||||||    
T  51532876 ccgaaattggcattagagagaatcgaacatgagacctttggagaagcaaactccaaaatctcaaaccaactaataggtcaaccccaaatgggtt 51532783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 803
Target Start/End: Complemental strand, 4462719 - 4462631
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    |||||||||  |||||||||| |||||||||||| ||   || |||||||| |||||||  |||||||||| |||| ||||| ||||||    
T  4462719 cgaaattggtgccagagggaatcgaacatgagacttttgaagtagcaaactccaagatctcaagccaaccactaggccaaccccaaatg 4462631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 715 - 783
Target Start/End: Original strand, 53863850 - 53863918
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    ||||||||||||||||| |||  |||| | ||||||||||||||||| ||| |||| ||| ||||||||    
T  53863850 cgaaattggcaccagagagaattgaacctaagaccttgagaggagcacactccaaggtcccaagccaac 53863918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 808
Target Start/End: Complemental strand, 55287887 - 55287796
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagacct-tgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    ||||||||||||||||||| ||||| ||| |||| ||| |||||||||||  ||||| | |||||||||| || | ||||| |||||||||||    
T  55287887 aaattggcaccagagggaatcgaacctgaaacctctga-aggagcaaactctaagattccaagccaaccactatgccaaccccaaatgggttc 55287796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 774
Target Start/End: Complemental strand, 9853702 - 9853643
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcc 774  Q
    ||||||||||||| | ||||| ||||| |||||||||  |||||||||||| ||||||||    
T  9853702 cgaaattggcaccggtgggaatcgaacctgagacctttggaggagcaaactccaagatcc 9853643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 809
Target Start/End: Original strand, 50731344 - 50731438
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttca 809  Q
    |||||||||| |||| | |||| | ||| ||||||||||||||||||| |||||||||||  ||| |||||| |||||| ||  ||||||| ||||    
T  50731344 ccgaaattggtacca-acggaatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccactaggtcgacaccaaatggattca 50731438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 809
Target Start/End: Complemental strand, 50781510 - 50781416
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttca 809  Q
    |||||||||| |||| | |||| | ||| ||||||||||||||||||| |||||||||||  ||| |||||| |||||| ||  ||||||| ||||    
T  50781510 ccgaaattggtacca-acggaatcaaacttgagaccttgagaggagcacacttcaagatctcaagtcaaccactaggtcgacaccaaatggattca 50781416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 765
Target Start/End: Original strand, 53288822 - 53288873
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaact 765  Q
    |||||||||||||||||||||| ||| | |||||||||  ||||||||||||    
T  53288822 ccgaaattggcaccagagggaatcgagcctgagacctttggaggagcaaact 53288873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 693 - 750
Target Start/End: Original strand, 2511385 - 2511443
Alignment:
Q  693 agctttgtatgaactt-gcctgccgaaattggcaccagagggaaccgaacatgagacct 750  Q
    |||| ||||||||||| |||  |||||||||||||||||||||| ||||| ||||||||    
T  2511385 agctctgtatgaacttagcccaccgaaattggcaccagagggaatcgaacctgagacct 2511443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 714 - 784
Target Start/End: Original strand, 10083929 - 10083999
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||||||||||| |||||||| | ||| |||| |||   |||||||||||| |||||||| |||||||||    
T  10083929 ccgaaattggcactagagggaatcaaacctgagccctctggaggagcaaactccaagatcccaagccaacc 10083999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 714 - 784
Target Start/End: Original strand, 10190852 - 10190922
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaacc 784  Q
    ||||||||||||| |||||||| | ||| |||| |||   |||||||||||| |||||||| |||||||||    
T  10190852 ccgaaattggcactagagggaatcaaacctgagccctctggaggagcaaactccaagatcccaagccaacc 10190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 35623271 - 35623317
Alignment:
Q  737 cgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    ||||||||||||||||||||||||| ||| |||| ||| ||||||||    
T  35623271 cgaacatgagaccttgagaggagcacactccaaggtcccaagccaac 35623317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 19857138 - 19857047
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| ||||| |||||| ||||| |||||| |   |||||||||||| |||||||| ||||||||||  ||| ||||| ||||||||||    
T  19857138 ccgaaattgacaccaaagggaatcgaacctgagacatctggaggagcaaactccaagatcc-aagccaaccaccaggccaacc-caaatgggtt 19857047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 783
Target Start/End: Complemental strand, 34844465 - 34844396
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaac 783  Q
    ||||||||||| |  ||||||| ||||| ||||||||||||||||||| ||| |||| ||  ||||||||    
T  34844465 ccgaaattggctctggagggaatcgaacctgagaccttgagaggagcacactccaaggtctcaagccaac 34844396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 714 - 808
Target Start/End: Complemental strand, 40412 - 40318
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagacct-tgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggttc 808  Q
    |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||| ||||||||||||||||||| |||| ||||| |||||||||||    
T  40412 ccgaaattggcaccagagggaatcgaacctgagacctctga-aggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgggttc 40318  T

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Target: scaffold0199 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 705 - 807
Target Start/End: Original strand, 8508 - 8610
Alignment:
Q  705 acttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgg 804  Q
    |||||||  ||||||||||||||||||  || ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| |||||||    
T  8508 acttgcccaccgaaattggcaccagagataatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 8607  T
Q  805 gtt 807  Q
    |||    
T  8608 gtt 8610  T

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Target: scaffold0623 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 803
Target Start/End: Original strand, 1166 - 1255
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||||| |||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||    
T  1166 ccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 1255  T

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Target: scaffold0366 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 714 - 803
Target Start/End: Original strand, 9409 - 9498
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||||| |||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||    
T  9409 ccgaaattggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 9498  T

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Target: scaffold0366; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 803
Target Start/End: Original strand, 12110 - 12199
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||||| ||||||| || ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||    
T  12110 ccgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 12199  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 717 - 807
Target Start/End: Complemental strand, 66846 - 66756
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||| |||| ||||| |||||||||  |||||||||||| |||||||| |||||||||| |||  ||| | ||||||||||    
T  66846 aaattggcaccagaaggaatcgaacgtgagacctttggaggagcaaactccaagatcccaagccaaccactagaccaatcccaaatgggtt 66756  T

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Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 717 - 807
Target Start/End: Complemental strand, 27860 - 27770
Alignment:
Q  717 aaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||| |||||| |||||  |||||||||||||||||||||| ||| |||| || ||||||| |||  ||||| ||||||||||    
T  27860 aaattggcaccacagggaatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatgggtt 27770  T

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Target: scaffold0460 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 8289 - 8382
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| ||||||||  ||||||||| ||   ||||| ||||||||||    
T  8289 ccgaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgggtt 8382  T

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Target: scaffold0459 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 803
Target Start/End: Original strand, 10803 - 10892
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatg 803  Q
    ||||||||||| ||||||| || ||||| ||||||||   |||||||||||| |||||||| |||||||||| |||| ||||| ||||||    
T  10803 ccgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 10892  T

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Target: scaffold0328 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 714 - 807
Target Start/End: Complemental strand, 15078 - 14985
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||| |||||||||||||  |||| ||||||||   |||||||||||| |||||||| | |||||||| |||| ||||| ||||||||||    
T  15078 ccgaaattagcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaggccaaccactaggccaaccccaaatgggtt 14985  T

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Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 715 - 807
Target Start/End: Original strand, 41755 - 41847
Alignment:
Q  715 cgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||| || |||||||| ||||| ||||||||   |||||||||||| |||||||| ||| |||||| |||| ||||| ||||||||||    
T  41755 cgaaattggaacaagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgggtt 41847  T

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Target: scaffold0051 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 714 - 806
Target Start/End: Original strand, 52981 - 53073
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggt 806  Q
    |||||||||||||||||||||| ||||| |||  |||   |||||||||||| |||||||| |||||||||| |||| ||| | |||||||||    
T  52981 ccgaaattggcaccagagggaatcgaacctgaagcctctggaggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgggt 53073  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 714 - 782
Target Start/End: Complemental strand, 161896 - 161828
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaa 782  Q
    |||||||||||||||||||||| ||||| ||||||||   |||||||||||| |||||||| |||||||    
T  161896 ccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaa 161828  T

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Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 7419 - 7512
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    |||||||||||||| ||||||| ||||| ||||| ||   |||||||||||| |||||||| |||||||| | |||| ||||| ||||| ||||    
T  7419 ccgaaattggcaccggagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaactactaggccaaccccaaataggtt 7512  T

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Target: scaffold0200 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 714 - 807
Target Start/End: Original strand, 26653 - 26746
Alignment:
Q  714 ccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaaccacaaatgggtt 807  Q
    ||||||||||||  |||| ||| | ||||||||||||   ||  |||||||| ||||||||||||||||||| |||| ||||| ||||||||||    
T  26653 ccgaaattggcataagagagaatcaaacatgagacctcttgaaaagcaaactccaagatcctaagccaaccagtaggccaaccccaaatgggtt 26746  T

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Target: scaffold0160 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 691 - 790
Target Start/End: Original strand, 29229 - 29328
Alignment:
Q  691 aaagctttgtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattagg 790  Q
    |||||| |||||| |||| ||  |||||| ||||| ||| ||||| ||||| | |||||||||||||| || |||||||||| | |||||||||| ||||    
T  29229 aaagctctgtatggacttaccgaccgaaaatggcatcagcgggaatcgaacctaagaccttgagaggaacacacttcaagattccaagccaaccactagg 29328  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 758
Target Start/End: Original strand, 123146 - 123205
Alignment:
Q  699 gtatgaacttgcctgccgaaattggcaccagagggaaccgaacatgagaccttgagagga 758  Q
    ||||| |||||||  |||||||||||| ||||||||| ||||||||||| || |||||||    
T  123146 gtatggacttgcccaccgaaattggcaacagagggaatcgaacatgagatctagagagga 123205  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 716 - 774
Target Start/End: Complemental strand, 20307 - 20249
Alignment:
Q  716 gaaattggcaccagagggaaccgaacatgagaccttgagaggagcaaacttcaagatcc 774  Q
    |||||||||||||||||||| | ||| |||||||||   ||||||||||| ||||||||    
T  20307 gaaattggcaccagagggaatcaaacctgagacctttgaaggagcaaactccaagatcc 20249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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