View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4689_high_36 (Length: 245)
Name: NF4689_high_36
Description: NF4689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4689_high_36 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 43803968 - 43804192
Alignment:
| Q |
5 |
ttgagatgggattaatgagagatatcaagtctacctcattatttgtnnnnnnnntatccaggtttttcttgataggttagaaagatatccaggcttttta |
104 |
Q |
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| T |
43803968 |
ttgagatgggattaatgagagatatcaagtctacctcattatttgtaaaaaaaatatccaggtttttcttgataggttagaaagatatccaggcttttta |
43804067 |
T |
|
| Q |
105 |
tgttgaggtttttcattatttgtaaaaataacatccaggctttgtgtgtatatttgagccttcagtctgttaatgatgttgtctgaactcctctatttaa |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43804068 |
tgttgaggtttttcattatttgtaaaaataacatccaggctttgtgtgtatatttgagccttcagtctgttaatgatgttgtctgaactcctctatttaa |
43804167 |
T |
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| Q |
205 |
ctttgtggtctacgatgaactaatt |
229 |
Q |
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||||||||||||||||||||||||| |
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| T |
43804168 |
ctttgtggtctacgatgaactaatt |
43804192 |
T |
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