View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4689_low_25 (Length: 252)
Name: NF4689_low_25
Description: NF4689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4689_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 3 - 244
Target Start/End: Original strand, 23615514 - 23615755
Alignment:
| Q |
3 |
attactcctatttacttttataccctcctttttcttcaatgccgtaaactatcttatctttctttcattcccaagacaagattgatcaacgttaatcaat |
102 |
Q |
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| T |
23615514 |
attactcctatttacttttatacccccctttttcttcaatgccgtaaactaccttatctttctttcattcccaagacaagattgatcaacgttaatcaat |
23615613 |
T |
|
| Q |
103 |
cttaaacactctctatgtatacatatgcaccaaaatcaagaggaagatgaaaagagagggccattttggcaattattattcctaaaaattctactcaacc |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23615614 |
cttaaacactctctatgtatacatatgcaccaaaatcaagaggaagatgaaaagagagggccattttggcaattattattcctaaaaattctactcaacc |
23615713 |
T |
|
| Q |
203 |
attgaaagacgacgaaacctaagcaagcaacctctctctctg |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
23615714 |
attgaaagacgacgaaacctaagcaagcaacctctctctctg |
23615755 |
T |
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