View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4689_low_53 (Length: 202)
Name: NF4689_low_53
Description: NF4689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4689_low_53 |
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Alignment Details
Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 24 - 197
Target Start/End: Original strand, 12735572 - 12735745
Alignment:
| Q |
24 |
gagtttacatgaactttagtgcaagtcaaaatatatcttttggtgtaaacataatattcttaatatatattttggtgtaaacatagtattcttaagtgtg |
123 |
Q |
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| T |
12735572 |
gagtttacatgaactttagtgcaagtcaaaatatatcttttggtgtaaacataatattcttaatatatattttggtgtaaacatagtgttcttaagtgtg |
12735671 |
T |
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| Q |
124 |
tagtatttttgttggacactcacacttattaatgaaatccttttaaacataatattacaaaagacattgtatat |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
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| T |
12735672 |
tagtatttttgttggacactcacacttattaatgaaatccttttaaacataatattgcaaaagacattgcatat |
12735745 |
T |
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