View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4690-Insertion-5 (Length: 204)
Name: NF4690-Insertion-5
Description: NF4690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4690-Insertion-5 |
 | |
|
| [»] chr2 (1 HSPs) |
| |
|
Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-106
Query Start/End: Original strand, 7 - 204
Target Start/End: Complemental strand, 36169378 - 36169181
Alignment:
| Q |
7 |
agtatattagtcatgtaatggtgtaaataatcaatcccacaatcaaattgaaagttcatctttctctttgtcggttgttagatttttgacatatttttct |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
36169378 |
agtatattagtcatgtaatggtgtaaataatcaatcccacaatcaaattgaaagttcatctttctctttgtcggttgttagatttttgacatatctttct |
36169279 |
T |
|
| Q |
107 |
ctccatatcaacctacttattttctctctgcttttattgttgatttttaaaatgcattcatactctattcattttctaggtccctccaccccatttta |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36169278 |
ctccatatcaacctacttattttctctctgcttttattgttgatttttaaaatgcattcatactctattcattttctaggtccctccaccccatttta |
36169181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University