View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4690_low_8 (Length: 238)
Name: NF4690_low_8
Description: NF4690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4690_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 32041869 - 32041715
Alignment:
| Q |
21 |
cagggaatgttcctgaggatttaagcacttcagatatgaatgatctcacatatgtggttgatgagaaaatgaaggaaattaatatgaagatggtgcaatt |
120 |
Q |
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| T |
32041869 |
cagggaatgttcctgaggatttaagcacttcagatatgaatgatctcacatatgtggttgatgagaaaatgaaggaaattaatatgaagatggtgcaatt |
32041770 |
T |
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| Q |
121 |
ggagaaggatgacaggtcttagggcatgtgagtggtagtagctacaaaataagtc |
175 |
Q |
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| T |
32041769 |
ggagaaggatgagaggtcttagggcatgtgagtggtagtagctacaaaataagtc |
32041715 |
T |
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