View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4691-Insertion-11 (Length: 320)

Name: NF4691-Insertion-11
Description: NF4691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4691-Insertion-11
NF4691-Insertion-11
[»] chr1 (32 HSPs)
chr1 (7-320)||(45935099-45935412)
chr1 (276-320)||(25715346-25715390)
chr1 (273-320)||(28090714-28090761)
chr1 (273-320)||(37462896-37462943)
chr1 (273-320)||(41560444-41560491)
chr1 (273-317)||(5338928-5338972)
chr1 (273-317)||(21769734-21769778)
chr1 (273-320)||(2429649-2429696)
chr1 (273-320)||(4590552-4590599)
chr1 (273-320)||(8796424-8796471)
chr1 (277-320)||(9599414-9599457)
chr1 (273-320)||(10200326-10200373)
chr1 (273-320)||(17269009-17269056)
chr1 (273-320)||(26113459-26113506)
chr1 (273-320)||(27704165-27704212)
chr1 (273-320)||(28511821-28511868)
chr1 (273-320)||(32404546-32404593)
chr1 (273-320)||(34444571-34444618)
chr1 (273-320)||(36339824-36339871)
chr1 (273-320)||(37294128-37294175)
chr1 (273-320)||(39140730-39140777)
chr1 (273-320)||(44751699-44751746)
chr1 (273-320)||(44941796-44941843)
chr1 (273-320)||(52532636-52532683)
chr1 (273-320)||(52561609-52561656)
chr1 (278-320)||(26299288-26299330)
chr1 (273-318)||(2544808-2544853)
chr1 (275-320)||(7124358-7124403)
chr1 (284-320)||(15784985-15785021)
chr1 (276-320)||(41165500-41165544)
chr1 (284-320)||(43481818-43481854)
chr1 (273-317)||(50257785-50257829)
[»] chr3 (20 HSPs)
chr3 (10-264)||(15817331-15817585)
chr3 (273-320)||(24778629-24778676)
chr3 (273-319)||(46148243-46148289)
chr3 (275-320)||(40672387-40672432)
chr3 (273-317)||(40991646-40991690)
chr3 (273-320)||(15296122-15296169)
chr3 (273-320)||(24541352-24541399)
chr3 (273-320)||(29601107-29601154)
chr3 (273-320)||(40116358-40116405)
chr3 (273-320)||(41529976-41530023)
chr3 (273-320)||(42510036-42510083)
chr3 (273-320)||(45374497-45374544)
chr3 (273-320)||(48508450-48508497)
chr3 (273-320)||(48734167-48734214)
chr3 (273-320)||(52927868-52927915)
chr3 (275-320)||(19676101-19676146)
chr3 (273-318)||(23534592-23534637)
chr3 (279-320)||(38060935-38060976)
chr3 (276-320)||(49503588-49503632)
chr3 (276-320)||(52882682-52882726)
[»] chr7 (17 HSPs)
chr7 (271-320)||(9210724-9210773)
chr7 (273-320)||(24376043-24376090)
chr7 (273-320)||(28708596-28708643)
chr7 (273-320)||(1011261-1011308)
chr7 (273-320)||(2885742-2885789)
chr7 (273-316)||(25891103-25891146)
chr7 (273-320)||(28627953-28628000)
chr7 (273-320)||(40979948-40979995)
chr7 (277-320)||(42187660-42187703)
chr7 (273-320)||(45601691-45601738)
chr7 (273-320)||(47852302-47852349)
chr7 (273-317)||(2882759-2882803)
chr7 (276-320)||(6263477-6263521)
chr7 (284-320)||(7273326-7273362)
chr7 (284-320)||(27649006-27649042)
chr7 (284-320)||(30814145-30814181)
chr7 (284-320)||(31681040-31681076)
[»] chr8 (10 HSPs)
chr8 (273-320)||(490550-490597)
chr8 (273-320)||(1928607-1928654)
chr8 (273-320)||(45419450-45419497)
chr8 (275-320)||(45041336-45041381)
chr8 (273-317)||(35914624-35914668)
chr8 (273-320)||(30689950-30689997)
chr8 (273-320)||(32931175-32931222)
chr8 (273-319)||(27556323-27556369)
chr8 (274-319)||(14903777-14903822)
chr8 (273-317)||(35646953-35646997)
[»] chr6 (6 HSPs)
chr6 (273-320)||(34525-34572)
chr6 (273-320)||(30031471-30031518)
chr6 (273-320)||(8364771-8364818)
chr6 (273-320)||(12890790-12890837)
chr6 (273-315)||(30642984-30643026)
chr6 (284-320)||(5897683-5897719)
[»] chr5 (12 HSPs)
chr5 (273-320)||(27386555-27386602)
chr5 (271-320)||(41894286-41894335)
chr5 (273-320)||(418054-418101)
chr5 (273-320)||(7359281-7359328)
chr5 (273-320)||(14667986-14668033)
chr5 (273-320)||(20456988-20457035)
chr5 (273-320)||(29922499-29922546)
chr5 (273-320)||(32442145-32442192)
chr5 (273-320)||(38132551-38132598)
chr5 (274-317)||(41108752-41108795)
chr5 (273-320)||(42272692-42272739)
chr5 (276-320)||(38105283-38105327)
[»] chr4 (20 HSPs)
chr4 (273-320)||(15661892-15661939)
chr4 (273-320)||(26024870-26024917)
chr4 (273-320)||(28467653-28467700)
chr4 (273-320)||(35690486-35690533)
chr4 (273-318)||(51176789-51176834)
chr4 (284-320)||(47265215-47265251)
chr4 (273-320)||(29399019-29399066)
chr4 (273-320)||(36255542-36255589)
chr4 (273-320)||(48174113-48174160)
chr4 (284-318)||(50967050-50967084)
chr4 (279-320)||(30634126-30634167)
chr4 (275-320)||(55007963-55008008)
chr4 (287-320)||(56375519-56375552)
chr4 (288-320)||(1380600-1380632)
chr4 (284-320)||(4879129-4879165)
chr4 (284-320)||(7947163-7947199)
chr4 (284-320)||(15665327-15665363)
chr4 (276-320)||(28236400-28236444)
chr4 (276-320)||(45209225-45209269)
chr4 (284-320)||(50862857-50862893)
[»] chr2 (18 HSPs)
chr2 (273-320)||(3720435-3720482)
chr2 (273-320)||(9531620-9531667)
chr2 (276-320)||(10516769-10516813)
chr2 (273-320)||(887085-887132)
chr2 (273-316)||(3481369-3481412)
chr2 (273-320)||(9496081-9496128)
chr2 (273-316)||(11412925-11412968)
chr2 (273-320)||(12520082-12520129)
chr2 (273-320)||(12882065-12882112)
chr2 (273-320)||(18959126-18959173)
chr2 (273-320)||(25384684-25384731)
chr2 (273-320)||(33504439-33504486)
chr2 (273-320)||(39709221-39709268)
chr2 (277-320)||(43573150-43573193)
chr2 (271-320)||(440929-440978)
chr2 (273-318)||(11992130-11992175)
chr2 (273-314)||(32364947-32364988)
chr2 (273-318)||(38435167-38435212)


Alignment Details
Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 7 - 320
Target Start/End: Original strand, 45935099 - 45935412
Alignment:
Q  7 aaaaaatataatttctgatgtttgcatgaattttcttatggacatcagatgcttttcatgggtaaacgaagatttggcaccaactttcagctcaagttcc 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45935099 aaaaaatataatttctgatgtttgcatgaattttcttatgggcatcagatgctttccatgggtaaacgaagatttggcaccaactttcagctcaagttcc 45935198  T
Q  107 gtattctcaaggcacttctgtttcttggcttcttgtcagtaatgatagtgttatttgttgtgtgtgcgcttacggtatcagatttgtttgcttccgttct 206  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45935199 gtattctcaaggcacttctatttcttggcttcttgtcagtaatgatagtgttatttgttgtgtgcgcgcttacggtatcagatttgtttgcttccgttct 45935298  T
Q  207 tgccttcatgccctctggatgggccattattctggtaagctaaaattcctgcatcatatagctaacaacattatggagtaatttgatccatgtagcggac 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45935299 tgccttcatgccctctggatgggccattattctggtaagctaaaattcctgcatcatatagctaacaacattatggagtaatttgatccatgtaacggac 45935398  T
Q  307 ctcacttagtggga 320  Q
    ||||||||||||||    
T  45935399 ctcacttagtggga 45935412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 25715390 - 25715346
Alignment:
Q  276 attatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  25715390 attatggcgtaatttgatccatgtagccgacctcacttagtggga 25715346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 28090761 - 28090714
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  28090761 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 28090714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 37462943 - 37462896
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  37462943 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 37462896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 41560444 - 41560491
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  41560444 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 41560491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 5338928 - 5338972
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtg 317  Q
    |||||||||| |||||||||||||||||||  |||||||||||||    
T  5338928 aacattatggcgtaatttgatccatgtagccaacctcacttagtg 5338972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 21769778 - 21769734
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtg 317  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||    
T  21769778 aacattatggcgtaatttgatccatgtagccgaccccacttagtg 21769734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 2429696 - 2429649
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||| ||||| |||| ||||||||||||    
T  2429696 aacattatggcgtaatttgatccacgtagccgaccccacttagtggga 2429649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 4590599 - 4590552
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  4590599 aacaatatggtgtaatttgatccatgtagccgaccccacttagtggga 4590552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 8796424 - 8796471
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||| ||||||||||| |||| ||||||||||||    
T  8796424 aacattatggcgtaatttaatccatgtagccgaccccacttagtggga 8796471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 9599457 - 9599414
Alignment:
Q  277 ttatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||    
T  9599457 ttatggcgtaatttgatccatgtagctgaccttacttagtggga 9599414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 10200373 - 10200326
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||| |||| ||||||||||||||||||| ||||||||||| |||||    
T  10200373 aacatcatggtgtaatttgatccatgtagccgacctcacttaatggga 10200326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 17269056 - 17269009
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| || |||||||||    
T  17269056 aacattatggcgtaatttgatccatgtagccgaccccatttagtggga 17269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 26113506 - 26113459
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||  |||||||||||||||||| || ||||||||||||||    
T  26113506 aacattatggcttaatttgatccatgtagccgagctcacttagtggga 26113459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 27704165 - 27704212
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| | ||||||||||    
T  27704165 aacattatggcgtaatttgatccatgtagccgaccccgcttagtggga 27704212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 28511868 - 28511821
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||| ||||||| |||| ||||||||||||    
T  28511868 aacattatggcgtaatttgatcaatgtagccgaccccacttagtggga 28511821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 32404593 - 32404546
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||| |||| ||||||||||||||||||| |||| ||||||||||||    
T  32404593 aacataatggcgtaatttgatccatgtagccgaccccacttagtggga 32404546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 34444571 - 34444618
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||| ||||||| |||| ||||||||||||    
T  34444571 aacattatggtgtaatttgatctatgtagccgaccccacttagtggga 34444618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 36339871 - 36339824
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||| |||||||||||||||||||| |||  ||||||||||||    
T  36339871 aacattatgaagtaatttgatccatgtagctgactccacttagtggga 36339824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 37294175 - 37294128
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| || |||||||||    
T  37294175 aacattatggcgtaatttgatccatgtagctgaccccatttagtggga 37294128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 39140730 - 39140777
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  39140730 aacattatggcgtaatttgattcatgtagccgaccccacttagtggga 39140777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 44751699 - 44751746
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| || |||||||||||||||| |||||||||||||||||    
T  44751699 aacactatggcgtcatttgatccatgtagccgacctcacttagtggga 44751746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 44941843 - 44941796
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  44941843 aacactatggcgtaatttgatccatgtagccgaccccacttagtggga 44941796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 52532683 - 52532636
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  52532683 aacattatggcgtaatttgattcatgtagccgaccccacttagtggga 52532636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 52561656 - 52561609
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| | ||||||||||||||||| |||| ||||||||||||    
T  52561656 aacattatggcgaaatttgatccatgtagccgaccccacttagtggga 52561609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 26299288 - 26299330
Alignment:
Q  278 tatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||    
T  26299288 tatggcgtaatttgatccatgtagccgaccccacttagtggga 26299330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 318
Target Start/End: Original strand, 2544808 - 2544853
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtgg 318  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||    
T  2544808 aacattatggcataatttgatccatgtagccgaccccacttagtgg 2544853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 7124358 - 7124403
Alignment:
Q  275 cattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||| ||  ||||||||||||||| |||||||||||||||||    
T  7124358 cattatggtgtcgtttgatccatgtagctgacctcacttagtggga 7124403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 15785021 - 15784985
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  15785021 gtaatttgatccatgtagccgacctcatttagtggga 15784985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 41165500 - 41165544
Alignment:
Q  276 attatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||| || |||||||||||||||| |||| ||||||||||||    
T  41165500 attatggcgtcatttgatccatgtagccgaccccacttagtggga 41165544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 43481854 - 43481818
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  43481854 gtaatttgatccatgtagccgaccccacttagtggga 43481818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 50257785 - 50257829
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtg 317  Q
    |||||||||| |||||||||||||||||||  ||| |||||||||    
T  50257785 aacattatggtgtaatttgatccatgtagccaaccccacttagtg 50257829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 15817331 - 15817585
Alignment:
Q  10 aaatataatttctgatgtttgcatgaattttcttatggacatcagatgcttttcatgggtaaacgaagatttggcaccaactttcagctcaagttccgta 109  Q
    |||| |||||||||||||||| ||||| |||| |||||  |||||||| ||| |||||||| |||||||||||| ||| |||||||||||| ||||||||    
T  15817331 aaatctaatttctgatgtttggatgaactttcatatgggtatcagatggtttccatgggtagacgaagatttggtaccgactttcagctcatgttccgta 15817430  T
Q  110 ttctcaaggcacttctgtttcttggcttcttgtcagtaatgatagtgttatttgttgtgtgtgcgcttacggtatcagatttgtttgcttccgttcttgc 209  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15817431 ttctcaaggcacttctgtttctcggcttcttgtcagtaatggcagtgttatttgttgtgtgtgcgcttacggtatcagatttgtttgcttccgttcttgc 15817530  T
Q  210 cttcatgccctctggatgggccattattctggtaagctaaaattcctgcatcata 264  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15817531 cttcatgccctctggatgggccattattctggtaagctaaatttcctgcatcata 15817585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 24778676 - 24778629
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  24778676 aacattatggtgtaatttgatccatgtagccgaccccacttagtggga 24778629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 46148243 - 46148289
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggg 319  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||    
T  46148243 aacattatggcgtaatttgatccatgtagccgaccccacttagtggg 46148289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 40672432 - 40672387
Alignment:
Q  275 cattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||  |||||||||||||||||| |||||||||||||||||    
T  40672432 cattatggcataatttgatccatgtagctgacctcacttagtggga 40672387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 40991646 - 40991690
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtg 317  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||    
T  40991646 aacattatggtgtaatttgatccatgtagctgaccccacttagtg 40991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 15296122 - 15296169
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||||||||| || |||| ||||||||||||    
T  15296122 aacattatggtgtaatttgatccatgtggccgaccccacttagtggga 15296169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 24541399 - 24541352
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||| | |||| ||||||||||||    
T  24541399 aacattatggcgtaatttgatccatgtacccgaccccacttagtggga 24541352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 29601107 - 29601154
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||  ||||||||||||||||||| |||| ||||||||||||    
T  29601107 aacattatgatgtaatttgatccatgtagctgaccccacttagtggga 29601154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 40116405 - 40116358
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||| ||||| |||||| ||||||||||    
T  40116405 aacattatggcgtaatttgatccacgtagccgacctcgcttagtggga 40116358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 41529976 - 41530023
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  41529976 aacactatggcgtaatttgatccatgtagccgaccccacttagtggga 41530023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 42510083 - 42510036
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  42510083 aacattatggcgtaatttgatccatgtagccgaccccacttagaggga 42510036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 45374544 - 45374497
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||| ||||||||||| |||| ||||||||||||    
T  45374544 aacattatggcgtaatttaatccatgtagctgaccccacttagtggga 45374497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 48508450 - 48508497
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  48508450 aacactatggcgtaatttgatccatgtagccgaccccacttagtggga 48508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 48734214 - 48734167
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||| |||||||||||||| |||| ||||||||||||    
T  48734214 aacattatggcgtaagttgatccatgtagctgaccccacttagtggga 48734167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 52927915 - 52927868
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  52927915 aacattatggcataatttgatccatgtagccgaccccacttagtggga 52927868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 19676146 - 19676101
Alignment:
Q  275 cattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||| || |||||||||||||||| |||| ||||||||||||    
T  19676146 cattatggcgtgatttgatccatgtagctgaccccacttagtggga 19676101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 23534637 - 23534592
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtgg 318  Q
    |||||||||| ||||||||||||||||||  |||||||||| ||||    
T  23534637 aacattatggcgtaatttgatccatgtagtcgacctcactttgtgg 23534592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 38060935 - 38060976
Alignment:
Q  279 atggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||||||||||||||||| |||| ||||||||||||    
T  38060935 atggcgtaatttgatccatgtagccgaccccacttagtggga 38060976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 49503632 - 49503588
Alignment:
Q  276 attatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||| ||||||||||||||||||| ||||  |||||||||||    
T  49503632 attatggcgtaatttgatccatgtagccgaccctacttagtggga 49503588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 52882726 - 52882682
Alignment:
Q  276 attatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||| |||||||||||||||||||  ||| ||||||||||||    
T  52882726 attatggcgtaatttgatccatgtagccaaccccacttagtggga 52882682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 9210773 - 9210724
Alignment:
Q  271 acaacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  9210773 acaacattatggcgtaatttgatccatgtagctgaccccacttagtggga 9210724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 24376090 - 24376043
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  24376090 aacattatggcgtaatttgatccatgtagccgacctcgcttagtggga 24376043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 28708596 - 28708643
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  28708596 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 28708643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 1011261 - 1011308
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||| ||||||| |||| ||||||||||||    
T  1011261 aacattatggtgtaatttgatctatgtagccgaccccacttagtggga 1011308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 2885789 - 2885742
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  2885789 aacactatggtgtaatttgatccatgtagccgaccccacttagtggga 2885742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 25891103 - 25891146
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagt 316  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||    
T  25891103 aacattatggtgtaatttgatccatgtagccgaccccacttagt 25891146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 28628000 - 28627953
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||  ||||||||||||    
T  28628000 aacattatggcgtaatttgatccatgtagccgactccacttagtggga 28627953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 40979995 - 40979948
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  40979995 aacactatggcgtaatttgatccatgtagccgaccccacttagtggga 40979948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 320
Target Start/End: Original strand, 42187660 - 42187703
Alignment:
Q  277 ttatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||| ||||||||||||||||||| |||| ||||||||||||    
T  42187660 ttatggcgtaatttgatccatgtagccgaccccacttagtggga 42187703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 45601691 - 45601738
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| || ||||||||||||||    
T  45601691 aacactatggtgtaatttgatccatgtagctgaactcacttagtggga 45601738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 47852302 - 47852349
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  47852302 aacattatggcgtaatttgatccatgtagccgaccccacttaggggga 47852349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 2882803 - 2882759
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtg 317  Q
    |||||||||| ||||||||||| || |||| ||||||||||||||    
T  2882803 aacattatggcgtaatttgatctatttagctgacctcacttagtg 2882759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 6263477 - 6263521
Alignment:
Q  276 attatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||  |||||||||||||||||| |||| ||||||||||||    
T  6263477 attatggcataatttgatccatgtagccgaccccacttagtggga 6263521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 7273326 - 7273362
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  7273326 gtaatttgatccatgtagccgaccccacttagtggga 7273362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 27649006 - 27649042
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  27649006 gtaatttgatccatgtagccgaccccacttagtggga 27649042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 30814181 - 30814145
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  30814181 gtaatttgatccatgtagccgaccccacttagtggga 30814145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 31681076 - 31681040
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  31681076 gtaatttgatccatgtagccgaccccacttagtggga 31681040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 490550 - 490597
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  490550 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 490597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 1928654 - 1928607
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  1928654 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 1928607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 45419450 - 45419497
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  45419450 aacattatggtgtaatttgatccatgtagccgaccccacttagtggga 45419497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 45041381 - 45041336
Alignment:
Q  275 cattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||    
T  45041381 cattatggcgtaatttgatccatgtagctgaccccacttagtggga 45041336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 35914668 - 35914624
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtg 317  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||    
T  35914668 aacattatggcgtaatttgatccatgtagctgaccccacttagtg 35914624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 30689950 - 30689997
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||  ||||||||||||||||||| |||| ||||||||||||    
T  30689950 aacattatgacgtaatttgatccatgtagccgaccccacttagtggga 30689997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 32931175 - 32931222
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  32931175 aacattatggcataatttgatccatgtagccgaccccacttagtggga 32931222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 27556369 - 27556323
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggg 319  Q
    ||||||||||  |||||||||||||||||| |||| |||||||||||    
T  27556369 aacattatggcataatttgatccatgtagccgaccccacttagtggg 27556323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 14903777 - 14903822
Alignment:
Q  274 acattatggagtaatttgatccatgtagcggacctcacttagtggg 319  Q
    ||||||||| |||||||||||||||||||  ||| |||||||||||    
T  14903777 acattatggcgtaatttgatccatgtagcttaccccacttagtggg 14903822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 35646997 - 35646953
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtg 317  Q
    |||||||||| ||||||||||||||| ||| |||| |||||||||    
T  35646997 aacattatggcgtaatttgatccatgcagccgaccccacttagtg 35646953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 34572 - 34525
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  34572 aacattatggcgtaatttgatccatgtagctgaccccacttagtggga 34525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 30031471 - 30031518
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  30031471 aacactatggcgtaatttgatccatgtagccgacctcacttagtggga 30031518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 8364771 - 8364818
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| | ||||||||||    
T  8364771 aacattatggcgtaatttgatccatgtagccgaccccgcttagtggga 8364818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 12890790 - 12890837
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  12890790 aacactatggcgtaatttgatccatgtagccgaccccacttagtggga 12890837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 315
Target Start/End: Original strand, 30642984 - 30643026
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttag 315  Q
    |||||||||||||||||||||| ||||||| |||| |||||||    
T  30642984 aacattatggagtaatttgatctatgtagccgaccccacttag 30643026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 5897683 - 5897719
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||||||||||||||| | ||||||||||||    
T  5897683 gtaatttgatccatgtagcggatcccacttagtggga 5897719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 27386555 - 27386602
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  27386555 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 27386602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 41894286 - 41894335
Alignment:
Q  271 acaacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||||| |||||||||||||||||||  ||| ||||||||||||    
T  41894286 acaacattatggtgtaatttgatccatgtagccaaccccacttagtggga 41894335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 418101 - 418054
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||| ||||||    
T  418101 aacattatggcgtaatttgatccatgtagccgaccccacttggtggga 418054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 7359328 - 7359281
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||  ||||||||||||||||||| |||| ||||||||||||    
T  7359328 aacattatgacgtaatttgatccatgtagctgaccccacttagtggga 7359281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 14667986 - 14668033
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||| | |||| ||||||||||||    
T  14667986 aacattatggtgtaatttgatccatgtaaccgaccccacttagtggga 14668033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 20456988 - 20457035
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||||    
T  20456988 aacattatggcgtcatttgatccatgtagccgaccccacttagtggga 20457035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 29922499 - 29922546
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||||||||||||  ||||||||| ||||||    
T  29922499 aacattatggcgtaatttgatccatgtagccaacctcacttggtggga 29922546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 32442192 - 32442145
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||  ||||||||||||    
T  32442192 aacattatggcgtaatttgatccatgtagccgactccacttagtggga 32442145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 38132551 - 38132598
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||||||||| || |||| ||||||||||||    
T  38132551 aacattatggcgtaatttgatccatgtggccgaccccacttagtggga 38132598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 41108795 - 41108752
Alignment:
Q  274 acattatggagtaatttgatccatgtagcggacctcacttagtg 317  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||    
T  41108795 acattatggcgtaatttgatccatgtagctgaccccacttagtg 41108752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 42272692 - 42272739
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||||    
T  42272692 aacattatggcgtcatttgatccatgtagctgaccccacttagtggga 42272739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 38105327 - 38105283
Alignment:
Q  276 attatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||| |||||||||||||||||| | |||||||| |||||||    
T  38105327 attatggcgtaatttgatccatgtagtgtacctcactaagtggga 38105283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 15661939 - 15661892
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  15661939 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 15661892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 26024917 - 26024870
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  26024917 aacattatggtgtaattttatccatgtagccgacctcacttagtggga 26024870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 28467653 - 28467700
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||    
T  28467653 aacattatggcgtaatttgatccatgtagcggaccccgcttagtggga 28467700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 35690486 - 35690533
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  35690486 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 35690533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 318
Target Start/End: Original strand, 51176789 - 51176834
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtgg 318  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||    
T  51176789 aacattatggcataatttgatccatgtagcggaccacacttagtgg 51176834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 47265251 - 47265215
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| |||||||||||||||||    
T  47265251 gtaatttgatccatgtagccgacctcacttagtggga 47265215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 29399019 - 29399066
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  29399019 aacattatggcgtaatttgattcatgtagctgaccccacttagtggga 29399066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 36255589 - 36255542
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||||||||| || |||| ||||||||||||    
T  36255589 aacattatggtgtaatttgatccatgtggccgaccccacttagtggga 36255542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 48174160 - 48174113
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||||    
T  48174160 aacattatggcgtcatttgatccatgtagcagaccccacttagtggga 48174113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 50967084 - 50967050
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtgg 318  Q
    ||||||||||||||||||| |||||||||||||||    
T  50967084 gtaatttgatccatgtagccgacctcacttagtgg 50967050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 30634167 - 30634126
Alignment:
Q  279 atggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||||||||||||||||| |||| ||||||||||||    
T  30634167 atggcgtaatttgatccatgtagccgaccccacttagtggga 30634126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 55007963 - 55008008
Alignment:
Q  275 cattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||  ||||||||||||||||||| |||| ||||||||||||    
T  55007963 cattatgacgtaatttgatccatgtagccgaccccacttagtggga 55008008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 56375519 - 56375552
Alignment:
Q  287 atttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||||||||| |||||||||||||||||    
T  56375519 atttgatccatgtagccgacctcacttagtggga 56375552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 288 - 320
Target Start/End: Original strand, 1380600 - 1380632
Alignment:
Q  288 tttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||| |||||||||||||||||    
T  1380600 tttgatccatgtagccgacctcacttagtggga 1380632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 4879165 - 4879129
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  4879165 gtaatttgatccatgtagccgacctcacttactggga 4879129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 7947163 - 7947199
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  7947163 gtaatttgatccatgtagccgaccccacttagtggga 7947199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 15665327 - 15665363
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  15665327 gtaatttgatccatgtagctgaccccacttagtggga 15665363  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 28236400 - 28236444
Alignment:
Q  276 attatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||| ||||||||||| ||||||| |||| ||||||||||||    
T  28236400 attatggtgtaatttgatctatgtagccgaccccacttagtggga 28236444  T

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Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 45209269 - 45209225
Alignment:
Q  276 attatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||| ||| ||||||||||||||| |||| ||||||||||||    
T  45209269 attatggcgtagtttgatccatgtagccgaccccacttagtggga 45209225  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 50862857 - 50862893
Alignment:
Q  284 gtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  50862857 gtaatttgatccatgtagccgaccccacttagtggga 50862893  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 3720482 - 3720435
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  3720482 aacattatggtgtaatttgatccatgtagccgaccccacttagtggga 3720435  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 9531667 - 9531620
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  9531667 aacattatggcgtaatttgatccatgtagccgaccccacttagtggga 9531620  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 10516813 - 10516769
Alignment:
Q  276 attatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||    
T  10516813 attatggcgtaatttgatccatgtagctgatctcacttagtggga 10516769  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 887132 - 887085
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| ||||||||||||||||||| |||| ||||| ||||||    
T  887132 aacattatggcgtaatttgatccatgtagctgaccccacttggtggga 887085  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 3481369 - 3481412
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagt 316  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||    
T  3481369 aacattatggcgtaatttgatccatgtagctgaccccacttagt 3481412  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 9496081 - 9496128
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||||||||||||  ||| ||||||||||||    
T  9496081 aacattatggcgtaatttgatccatgtagccaaccccacttagtggga 9496128  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 316
Target Start/End: Original strand, 11412925 - 11412968
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagt 316  Q
    |||||||||| ||||||||||||||||||| || ||||||||||    
T  11412925 aacattatggtgtaatttgatccatgtagccgaactcacttagt 11412968  T

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Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 12520129 - 12520082
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  12520129 aacactatggcgtaatttgatccatgtagccgaccccacttagtggga 12520082  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 12882112 - 12882065
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||| ||| |||||||||||||||||||  ||||||||||||||||    
T  12882112 aacattttggcgtaatttgatccatgtagcctacctcacttagtggga 12882065  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 18959126 - 18959173
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||||    
T  18959126 aacattatggcataatttgatccatgtagctgaccccacttagtggga 18959173  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 25384684 - 25384731
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| |||||||||||||||||||  ||||||||||||||||    
T  25384684 aacactatggcgtaatttgatccatgtagccaacctcacttagtggga 25384731  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 33504439 - 33504486
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||| |||||||||||||| |||| |||| ||||||||||||    
T  33504439 aacattatggcgtaatttgatccatctagccgaccccacttagtggga 33504486  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 320
Target Start/End: Complemental strand, 39709268 - 39709221
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||| ||||| ||||||||||||||||||| |||| ||||||||||||    
T  39709268 aacactatggcgtaatttgatccatgtagccgaccccacttagtggga 39709221  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 43573193 - 43573150
Alignment:
Q  277 ttatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||| ||||||||||||||||||| |||| ||||||||||||    
T  43573193 ttatggcgtaatttgatccatgtagccgaccccacttagtggga 43573150  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 440929 - 440978
Alignment:
Q  271 acaacattatggagtaatttgatccatgtagcggacctcacttagtggga 320  Q
    |||||||||||| ||||||||||||||||||| |||  ||||||| ||||    
T  440929 acaacattatggcgtaatttgatccatgtagctgactccacttagaggga 440978  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 11992175 - 11992130
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtgg 318  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||    
T  11992175 aacattatggcgttatttgatccatgtagctgaccccacttagtgg 11992130  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 32364988 - 32364947
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcactta 314  Q
    |||||||||| ||||||||||| ||||||| |||||||||||    
T  32364988 aacattatggtgtaatttgatcaatgtagctgacctcactta 32364947  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 318
Target Start/End: Original strand, 38435167 - 38435212
Alignment:
Q  273 aacattatggagtaatttgatccatgtagcggacctcacttagtgg 318  Q
    |||||||||| ||||||||||||||||||| || | ||||||||||    
T  38435167 aacattatggcgtaatttgatccatgtagccgatcccacttagtgg 38435212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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