View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4691-Insertion-4 (Length: 710)

Name: NF4691-Insertion-4
Description: NF4691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4691-Insertion-4
NF4691-Insertion-4
[»] chr4 (26 HSPs)
chr4 (7-686)||(43893491-43894180)
chr4 (89-199)||(52673809-52673919)
chr4 (85-159)||(40792411-40792485)
chr4 (92-129)||(7381278-7381315)
chr4 (109-176)||(16320537-16320604)
chr4 (625-688)||(37559014-37559075)
chr4 (85-148)||(41720837-41720900)
chr4 (90-176)||(9512341-9512427)
chr4 (85-130)||(9435392-9435437)
chr4 (99-176)||(12600894-12600971)
chr4 (623-688)||(37560338-37560401)
chr4 (99-176)||(37865761-37865838)
chr4 (85-130)||(41897405-41897450)
chr4 (120-176)||(7554958-7555014)
chr4 (623-689)||(23752030-23752094)
chr4 (85-176)||(36743689-36743780)
chr4 (109-176)||(41711865-41711932)
chr4 (119-174)||(55741873-55741928)
chr4 (85-183)||(20644235-20644333)
chr4 (623-688)||(29833386-29833449)
chr4 (109-199)||(50729520-50729610)
chr4 (622-688)||(55953891-55953955)
chr4 (91-168)||(9947929-9948006)
chr4 (623-688)||(11115019-11115082)
chr4 (623-688)||(33377403-33377466)
chr4 (623-688)||(46796065-46796128)
[»] chr3 (32 HSPs)
chr3 (85-198)||(44000253-44000366)
chr3 (85-176)||(21221362-21221453)
chr3 (85-146)||(19190655-19190716)
chr3 (90-130)||(16145869-16145909)
chr3 (85-176)||(34026659-34026750)
chr3 (623-688)||(41387472-41387535)
chr3 (85-176)||(1344709-1344800)
chr3 (622-685)||(8371233-8371294)
chr3 (85-176)||(51296573-51296664)
chr3 (622-688)||(10987692-10987756)
chr3 (90-176)||(24571278-24571364)
chr3 (623-688)||(8372655-8372718)
chr3 (91-168)||(14155470-14155547)
chr3 (623-688)||(51401390-51401453)
chr3 (106-174)||(19190714-19190781)
chr3 (623-687)||(19579234-19579296)
chr3 (108-168)||(50678813-50678873)
chr3 (85-168)||(3695302-3695385)
chr3 (85-176)||(25860423-25860514)
chr3 (85-176)||(53557797-53557888)
chr3 (626-688)||(26798945-26799005)
chr3 (85-159)||(33364797-33364871)
chr3 (626-688)||(39133034-39133094)
chr3 (623-685)||(41386144-41386204)
chr3 (623-688)||(43101908-43101971)
chr3 (623-688)||(5416212-5416275)
chr3 (97-174)||(8067061-8067138)
chr3 (623-688)||(17350141-17350204)
chr3 (628-688)||(19253041-19253099)
chr3 (85-130)||(30043879-30043924)
chr3 (97-158)||(42547390-42547451)
chr3 (85-154)||(44116931-44117000)
[»] chr8 (25 HSPs)
chr8 (89-191)||(22756419-22756521)
chr8 (85-176)||(16595172-16595263)
chr8 (623-688)||(43386741-43386804)
chr8 (85-176)||(6386567-6386658)
chr8 (85-176)||(29672346-29672437)
chr8 (91-176)||(36426270-36426355)
chr8 (109-181)||(15001481-15001553)
chr8 (85-176)||(13406958-13407049)
chr8 (85-176)||(14005067-14005158)
chr8 (619-686)||(37324729-37324794)
chr8 (85-176)||(37618415-37618506)
chr8 (85-176)||(39642874-39642965)
chr8 (113-199)||(54189-54275)
chr8 (623-688)||(24068344-24068407)
chr8 (623-688)||(41867955-41868018)
chr8 (103-191)||(3800951-3801039)
chr8 (625-688)||(31625423-31625484)
chr8 (622-688)||(117061-117125)
chr8 (85-176)||(10656709-10656800)
chr8 (85-176)||(41709768-41709859)
chr8 (110-176)||(7394837-7394903)
chr8 (622-688)||(43277960-43278024)
chr8 (623-688)||(31623920-31623983)
chr8 (623-688)||(35943921-35943985)
chr8 (623-688)||(38591046-38591109)
[»] chr6 (16 HSPs)
chr6 (85-175)||(7396173-7396263)
chr6 (91-189)||(29424602-29424699)
chr6 (85-176)||(10959991-10960082)
chr6 (92-176)||(31870147-31870231)
chr6 (85-176)||(10324158-10324249)
chr6 (109-176)||(11279143-11279210)
chr6 (85-168)||(11382055-11382138)
chr6 (622-688)||(18773667-18773731)
chr6 (622-688)||(22299942-22300006)
chr6 (623-688)||(9927620-9927683)
chr6 (90-159)||(27824714-27824783)
chr6 (110-176)||(11212273-11212339)
chr6 (90-123)||(8342694-8342727)
chr6 (623-688)||(8412355-8412418)
chr6 (623-688)||(31738377-31738440)
chr6 (85-130)||(32614031-32614076)
[»] chr5 (16 HSPs)
chr5 (90-191)||(17031153-17031254)
chr5 (90-168)||(700623-700701)
chr5 (85-176)||(21739175-21739266)
chr5 (85-176)||(22432323-22432414)
chr5 (85-184)||(27839079-27839178)
chr5 (85-176)||(39918498-39918589)
chr5 (85-176)||(41790476-41790567)
chr5 (623-687)||(12936142-12936204)
chr5 (109-176)||(7208244-7208311)
chr5 (85-176)||(28090534-28090625)
chr5 (85-176)||(40489328-40489419)
chr5 (110-176)||(4689712-4689778)
chr5 (623-688)||(5061042-5061105)
chr5 (110-176)||(7770293-7770359)
chr5 (623-688)||(18677990-18678053)
chr5 (623-688)||(21387651-21387714)
[»] chr1 (25 HSPs)
chr1 (100-168)||(2761647-2761715)
chr1 (85-176)||(6711129-6711220)
chr1 (85-176)||(17327732-17327823)
chr1 (85-176)||(41967932-41968023)
chr1 (90-176)||(1601178-1601264)
chr1 (90-176)||(50540349-50540435)
chr1 (85-156)||(4895393-4895462)
chr1 (90-130)||(52030334-52030374)
chr1 (85-176)||(16476238-16476329)
chr1 (110-181)||(50382481-50382552)
chr1 (622-688)||(13641270-13641334)
chr1 (623-688)||(25785982-25786045)
chr1 (109-181)||(13994153-13994225)
chr1 (85-129)||(30798821-30798865)
chr1 (623-686)||(25787205-25787266)
chr1 (85-176)||(28340386-28340477)
chr1 (90-168)||(504482-504560)
chr1 (110-168)||(16643273-16643331)
chr1 (90-164)||(46447669-46447743)
chr1 (101-166)||(51374405-51374471)
chr1 (623-688)||(13929309-13929372)
chr1 (623-688)||(13930714-13930777)
chr1 (623-688)||(26056186-26056249)
chr1 (619-688)||(48934251-48934318)
chr1 (623-688)||(50679860-50679923)
[»] scaffold0027 (1 HSPs)
scaffold0027 (90-176)||(15168-15254)
[»] scaffold0046 (2 HSPs)
scaffold0046 (623-688)||(23420-23483)
scaffold0046 (623-688)||(24854-24917)
[»] chr7 (25 HSPs)
chr7 (85-148)||(29992732-29992794)
chr7 (85-176)||(32873778-32873869)
chr7 (85-159)||(46627165-46627239)
chr7 (623-688)||(4858383-4858446)
chr7 (85-196)||(2048947-2049057)
chr7 (85-176)||(47316707-47316798)
chr7 (622-688)||(4857214-4857278)
chr7 (623-688)||(19279651-19279714)
chr7 (120-176)||(17237106-17237162)
chr7 (105-177)||(21408634-21408706)
chr7 (89-157)||(38360070-38360138)
chr7 (623-687)||(40926559-40926621)
chr7 (625-685)||(45721808-45721866)
chr7 (109-176)||(1363655-1363722)
chr7 (85-168)||(3922720-3922803)
chr7 (85-176)||(29661318-29661409)
chr7 (109-176)||(41665584-41665651)
chr7 (85-175)||(30052940-30053030)
chr7 (623-689)||(43006399-43006463)
chr7 (135-176)||(11822268-11822309)
chr7 (623-688)||(17288259-17288322)
chr7 (623-688)||(22061834-22061897)
chr7 (623-688)||(41126253-41126316)
chr7 (623-660)||(44114720-44114757)
chr7 (90-199)||(48445521-48445630)
[»] chr2 (25 HSPs)
chr2 (85-176)||(35114776-35114867)
chr2 (85-176)||(40832477-40832568)
chr2 (90-174)||(26796225-26796308)
chr2 (85-176)||(1230902-1230993)
chr2 (85-176)||(5278842-5278933)
chr2 (85-176)||(7761581-7761672)
chr2 (110-181)||(41366113-41366184)
chr2 (85-176)||(44284620-44284711)
chr2 (85-159)||(30326356-30326430)
chr2 (90-175)||(41934577-41934662)
chr2 (85-176)||(7258887-7258979)
chr2 (92-176)||(10399878-10399962)
chr2 (85-176)||(16104265-16104356)
chr2 (109-176)||(28824565-28824632)
chr2 (85-176)||(30798497-30798588)
chr2 (90-176)||(12939308-12939394)
chr2 (85-159)||(16177908-16177982)
chr2 (623-661)||(23178946-23178984)
chr2 (623-661)||(23590203-23590241)
chr2 (109-159)||(38993096-38993146)
chr2 (89-126)||(2394265-2394302)
chr2 (623-688)||(12854143-12854206)
chr2 (623-688)||(23177687-23177751)
chr2 (623-688)||(23588944-23589008)
chr2 (623-688)||(37867770-37867833)
[»] scaffold0084 (1 HSPs)
scaffold0084 (622-688)||(13243-13307)
[»] scaffold0208 (1 HSPs)
scaffold0208 (99-176)||(2352-2429)
[»] scaffold0062 (1 HSPs)
scaffold0062 (90-130)||(3688-3728)
[»] scaffold0077 (1 HSPs)
scaffold0077 (89-168)||(7480-7563)
[»] scaffold0178 (1 HSPs)
scaffold0178 (623-688)||(2304-2367)
[»] scaffold0054 (1 HSPs)
scaffold0054 (110-176)||(23591-23657)
[»] scaffold0013 (1 HSPs)
scaffold0013 (622-687)||(96855-96918)
[»] scaffold0025 (1 HSPs)
scaffold0025 (623-687)||(56740-56802)


Alignment Details
Target: chr4 (Bit Score: 475; Significance: 0; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 7 - 686
Target Start/End: Original strand, 43893491 - 43894180
Alignment:
Q  7 atgtattagatagaatagcacaacataagttagaataacacaaagacaaacttttatggtattgannnnnnnnnnnnn--atacaatttttggtggacaa 104  Q
    ||||||||||||||||||||||||| || | ||||||||||||||||||  ||||||||||||||               ||| ||||||||||||||||    
T  43893491 atgtattagatagaatagcacaacacaaatcagaataacacaaagacaactttttatggtattgattttttttttgttttatataatttttggtggacaa 43893590  T
Q  105 aaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatgattttgtaatgtcccaaaaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43893591 aaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtggtttagtgaaggacaaatatttatgattttgtaatgtcccaaaaa 43893690  T
Q  205 caattttataaactaaaacaactggagttgtcatattatcatcatgtccttcattttttaacggatcaaacacatcttaacaaaatagatagtccaaaat 304  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43893691 caattttataaactaaaacaactggagttgttatattatcattatgtccttcattttttaacagatcaaacacatcttaacaaaatagatagtccaaaat 43893790  T
Q  305 taatttatgtttttgtgcgatttaatgactactgtgataatgaatcacattataaaacaacaatttgcccccaaaaaactannnnnnnngtttgtttgtg 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||    
T  43893791 taatttatgtttttgtgcgatttaatgactactgtgataatgaatcacattataaaacaacaatttgcccccaaaaaactattttttt--tttgtttgtg 43893888  T
Q  405 ttgtgcaagagatatgtgatttaaccctatgaactactcgttggaaatcaagttggaatatatatggttttcttatcgttgtgaacatgttttttcaata 504  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43893889 ttgtgcaagagatatgtgatttaacactatgaactactcgttggaaatcaagttggaatatatatggttttcttatcgttgagaacatgttttttcaata 43893988  T
Q  505 tgataataactcatctcgcaccttgacttacaccaataatagccatctaagtatcaaaatcatgaacgttgtcacatgcaaagaacctcataagaacacc 604  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||     
T  43893989 tgataataactcatcttgcaccttgacttacgccaataatagccatctaagtatcaaaatcatgaacgttgtcatatgcaaagaacctaataagaacaca 43894088  T
Q  605 attgaaaagttgacttaa------------tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtc 686  Q
    |||||||||||| |||||            ||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||||    
T  43894089 attgaaaagttggcttaatacatcatatagtcccttaacttatttttggttttcagtttggtcccct-aact-ataaaatgtctcaatttggtc 43894180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 52673809 - 52673919
Alignment:
Q  89 aatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatgattt 188  Q
    |||||||||||||||||||  |||||||||||||||||||||    ||||||||||||||||||||||| | |||||||| ||||||| |||| || |||    
T  52673809 aatttttggtggacaaaaatttatttttgtattttagataactcatacgtgagacaaaaaattgtgttgaggtttagtgagggacaaaaatttctgtttt 52673908  T
Q  189 tgtaatgtccc 199  Q
    ||| |||||||    
T  52673909 tgtcatgtccc 52673919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 40792411 - 40792485
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtg 159  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| || || ||| ||||||| ||||| ||||    
T  40792411 atacgatttttgatggacaaaaagctatttttgtattttagataacttgtacatgaaacaaaaagttgtgatgtg 40792485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 7381278 - 7381315
Alignment:
Q  92 ttttggtggacaaaaaactatttttgtattttagataa 129  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7381278 ttttggtggacaaaaaactatttttgtattttagataa 7381315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 16320537 - 16320604
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||||||||||||  |||||| ||||| |||||||| |||||||||| ||| |||| |||||||    
T  16320537 ctatttttgtattttaggcaacctgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaa 16320604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 625 - 688
Target Start/End: Original strand, 37559014 - 37559075
Alignment:
Q  625 ccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||| || |||| ||||||||||| |||| |||||||||||||||||||||||    
T  37559014 ccttaacttatttttggttttcaatttggtcccct-aact-ataaaatgtctcaatttggtccc 37559075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 41720837 - 41720900
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaa 148  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||  || ||||| ||||||||    
T  41720837 atactattttttgtggacaaaaaattatttttgtattttagataatttgtacgtgggacaaaaa 41720900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 9512427 - 9512341
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||  ||||||||  ||||||| |||||||||| ||| || ||||| |||||||| ||||| |||| ||| ||||||||||||    
T  9512427 atttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaa 9512341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 9435392 - 9435437
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataac 130  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||    
T  9435392 ataccatttttggtagacaaaaagctatttttgtattttagataac 9435437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 12600894 - 12600971
Alignment:
Q  99 ggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||  ||||||| |||||||||| ||| || |||||||||||||| |||||||||| |||  ||| |||||||    
T  12600894 ggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttgatgagggacaaa 12600971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 37560401 - 37560338
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  37560401 tcccttaacttatttttggttttcaatttggtcccct-aact-ataaagtgtctcaatttggtccc 37560338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 37865761 - 37865838
Alignment:
Q  99 ggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||  ||||||| |||||||||| ||| || || || |||||||| |||||||||||||| |||| |||||||    
T  37865761 ggacaaaatgctattttggtattttagacaacttgtacatgggacaaaaagttgtgttgtgatttggtgagggacaaa 37865838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 41897450 - 41897405
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataac 130  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||    
T  41897450 atacaattttttgtggataaaaaactatttttgtattttatataac 41897405  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 7555014 - 7554958
Alignment:
Q  120 ttttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||| ||| || |||||||||||||| ||||||| || ||||||||||||||||    
T  7555014 ttttagacaacttgtacgtgagacaaaaagttgtgttatggtttagtgaaggacaaa 7554958  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 689
Target Start/End: Original strand, 23752030 - 23752094
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtcccc 689  Q
    |||||||||||||||||||  |||| |||||||||||||  |  |||| ||||||||||||||||||    
T  23752030 tcccttaacttatttttagatttcaatttggtcccctaactt--taaattgtctcaatttggtcccc 23752094  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 36743780 - 36743689
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||  ||||||||  ||||||| |||||||||| ||| || ||||| |||||||| ||||| |||  ||| |||| |||||||    
T  36743780 atacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtagtttggtgagggacaaa 36743689  T

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Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 41711865 - 41711932
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||| |||||||||| |||||| |||||||||||||| ||||  |||| ||| |||| |||||||    
T  41711865 ctattttggtattttagacaacctgtacgtgagacaaaaagttgtactgtggtttggtgagggacaaa 41711932  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 55741873 - 55741928
Alignment:
Q  119 attttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggaca 174  Q
    |||||||||||| || | ||||||||||||||||||  ||| ||||||||||||||    
T  55741873 attttagataacttgtatgtgagacaaaaaattgtgacgtggtttagtgaaggaca 55741928  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 20644333 - 20644235
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttat 183  Q
    |||| |||||||||| ||||||| |||||||||||| ||||||||| || ||  ||||||| ||  || | |||| ||||||||  |||||| ||||||    
T  20644333 atacgatttttggtgtacaaaaatctatttttgtatcttagataacttgtacacgagacaagaagctgggatgtggtttagtgagagacaaaaatttat 20644235  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 29833386 - 29833449
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||  |  |||| |||||||||||||  | |||||||||||||||||||||||    
T  29833386 tcccttaacttattttcggatttcattttggtcccctaa--ttataaaatgtctcaatttggtccc 29833449  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 50729610 - 50729520
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatgattttgtaatgtccc 199  Q
    ||||||| |||||||||| ||| || |||||||||||||| ||||| |||| ||| ||||  |||||| ||||  | |||||| |||||||    
T  50729610 ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgatagacaaaaatttcagtttttgtcatgtccc 50729520  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 622 - 688
Target Start/End: Complemental strand, 55953955 - 55953891
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||||  | |||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  55953955 atcccttaacttatttttgattttcaatttggtcccataa-cta-taaaatgtctcaatttggtccc 55953891  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 9947929 - 9948006
Alignment:
Q  91 tttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    ||||| |||||||||  |||||||| |||||||  ||||| || |||||||||||||| ||||  |||| ||||||||    
T  9947929 ttttttgtggacaaaggactattttggtattttgaataacttgtacgtgagacaaaaagttgtaatgtggtttagtga 9948006  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 11115082 - 11115019
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||| ||| |||| ||||||||||| |||| ||||| | |||||||||||||||    
T  11115082 tcccttaacttattttcagttttcattttggtcccct-aact-ataaagtatctcaatttggtccc 11115019  T

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Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 33377466 - 33377403
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||  | |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  33377466 tcccttaacttatttttgattttcaatttggtcccct-aact-ataaagtgtctcaatttggtccc 33377403  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 46796128 - 46796065
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || || | ||||||||||| |||| ||||| |||||||||||||||||    
T  46796128 tcccttaacttatttttggttttaattttggtcccct-aact-ataaagtgtctcaatttggtccc 46796065  T

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Target: chr3 (Bit Score: 58; Significance: 5e-24; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 44000253 - 44000366
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatg 184  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| || ||||| |||||||||||||| |||| |||||||| ||| ||| | || ||    
T  44000253 atacgatttttggtggacaaaaaactatttttgtatttcagataacttgtacgtgggacaaaaaattgtgatgtggtttagtgagggaaaaaaaattctg 44000352  T
Q  185 attttgtaatgtcc 198  Q
     |||||| ||||||    
T  44000353 tttttgtcatgtcc 44000366  T

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Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 21221453 - 21221362
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||  ||||||||  ||||||| |||||||||| ||| || |||||||||||||| |||||||||| ||| |||| |||||||    
T  21221453 atacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaa 21221362  T

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Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 19190655 - 19190716
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaa 146  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| || | ||||||||||    
T  19190655 atacgatttttggtggtcaaaaaactatttttgtattttagataacttgtatgtgagacaaa 19190716  T

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Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 16145909 - 16145869
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataac 130  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16145909 atttttggtggacaaaaaactatttttgtattttagataac 16145869  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 34026659 - 34026750
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || ||||| ||||||||||||||||||| ||| |||| |||||||    
T  34026659 atacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaa 34026750  T

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Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 41387535 - 41387472
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||||||||||| |||| |||||||||||||||||||||||    
T  41387535 tcccttaacttatttttggttttcaatttggtcccct-aact-ataaaatgtctcaatttggtccc 41387472  T

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Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 1344800 - 1344709
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || |||||||||||||| ||||| |||| ||| |||| |||||||    
T  1344800 atacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaa 1344709  T

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Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 622 - 685
Target Start/End: Original strand, 8371233 - 8371294
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggt 685  Q
    |||||||||||||||||| || |||| ||||||||||| |||| ||||||||||||||||||||    
T  8371233 atcccttaacttattttttgttttcattttggtcccct-aact-ataaaatgtctcaatttggt 8371294  T

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Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 51296573 - 51296664
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||| | ||||||||  |||||||||||||||||| ||| || || |  ||||||||||||||||||| ||| |||| |||||||    
T  51296573 atacgattttttggggacaaaatgctatttttgtattttagacaacttgtacttaggacaaaaaattgtgttgtggtttggtgagggacaaa 51296664  T

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Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 622 - 688
Target Start/End: Complemental strand, 10987756 - 10987692
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  10987756 atcccttaacttatttttggttttcattttggtcccct-aact-ataaagtgtctcaatttggtccc 10987692  T

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Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 24571278 - 24571364
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||| ||||||||  |||||||||||||||||| ||| || || || |||||||| ||||| |||| ||| |||| |||||||    
T  24571278 atttttgggggacaaaatcctatttttgtattttagacaacttgtacatgggacaaaaagttgtgctgtggtttggtgagggacaaa 24571364  T

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Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 8372718 - 8372655
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  8372718 tcccttaacttatttttggttttcattttggtcccct-aact-ataaagtgtctcaatttggtccc 8372655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 14155547 - 14155470
Alignment:
Q  91 tttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    ||||| |||||||||| | ||||||  ||||||||| ||| || || ||||||||||| ||||||| |||||||||||    
T  14155547 ttttttgtggacaaaagattattttgatattttagacaacttgtacttgagacaaaaagttgtgttatgatttagtga 14155470  T

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Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 51401453 - 51401390
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  51401453 tcccttaacttatttttggttttcactttggtcccct-aact-ataaagtgtctcaatttggtccc 51401390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 19190714 - 19190781
Alignment:
Q  106 aaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggaca 174  Q
    ||||||||||||||||||||||||| |  | ||||||| |||||||||| |||| |||||||| |||||    
T  19190714 aaactatttttgtattttagataacttatatgtgagac-aaaaattgtgatgtggtttagtgagggaca 19190781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 687
Target Start/End: Original strand, 19579234 - 19579296
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtcc 687  Q
    |||||||||||||||| ||  |||| ||||||||||| |||| ||||||||||||||||||||||    
T  19579234 tcccttaacttattttcagatttcattttggtcccct-aact-ataaaatgtctcaatttggtcc 19579296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 50678813 - 50678873
Alignment:
Q  108 actatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    |||||||| |||||||||| ||| || |||||||||||||| |||||||||| ||| ||||    
T  50678813 actattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga 50678873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 3695385 - 3695302
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    ||||||||||||| ||| |||| |||||||| |||||||||| ||| || ||||| |||||||  ||||| |||| ||| ||||    
T  3695385 atacaatttttgggggataaaatactattttggtattttagacaacttgtacgtgggacaaaaggttgtgatgtggtttggtga 3695302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 25860514 - 25860423
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||| | ||||||  ||||||  |||||||||| ||| || |||||||||||||| ||||| |||| ||| |||| |||||||    
T  25860514 atacgatttttggagaacaaaatgctatttcggtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttggtgagggacaaa 25860423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 53557888 - 53557797
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || |||||||||||||| |||||  ||| ||| |||| |||||||    
T  53557888 atacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgcagtggtttggtgagggacaaa 53557797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 626 - 688
Target Start/End: Complemental strand, 26799005 - 26798945
Alignment:
Q  626 cttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||| || || | ||||||||||||| ||| ||||||||||||||||||||||    
T  26799005 cttaacttatttttggtttttattttggtcccctaa-cta-taaaatgtctcaatttggtccc 26798945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 33364871 - 33364797
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtg 159  Q
    |||| |||||||| ||||||||  |||||||  ||||||||| ||| || |||||||||||||| ||||| ||||    
T  33364871 atacgatttttgggggacaaaatgctattttgatattttagacaacttgtacgtgagacaaaaagttgtgatgtg 33364797  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 626 - 688
Target Start/End: Original strand, 39133034 - 39133094
Alignment:
Q  626 cttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  39133034 cttaacttatttttggttttcaatttggtcccct-aact-ataaagtgtctcaatttggtccc 39133094  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 685
Target Start/End: Original strand, 41386144 - 41386204
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggt 685  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| ||||||||||||||    
T  41386144 tcccttaacttatttttggttttcaatttggtcccct-aact-ataaagtgtctcaatttggt 41386204  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 43101908 - 43101971
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| |||||||| ||||  | ||||| |||||||||||||||||    
T  43101908 tcccttaacttatttttggttttcattttggtcctctaa--ttataaagtgtctcaatttggtccc 43101971  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 5416212 - 5416275
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||  |  |||| ||||||||||||| ||| ||||||||||||||||||||||    
T  5416212 tcccttaacttattttcggatttcattttggtcccctaa-cta-taaaatgtctcaatttggtccc 5416275  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 174
Target Start/End: Complemental strand, 8067138 - 8067061
Alignment:
Q  97 gtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggaca 174  Q
    ||||||||||| |||||||  ||||||| ||||| || ||||| |||||||| ||||  | |||||| ||||||||||    
T  8067138 gtggacaaaaagctattttgatattttatataacttgtacgtgtgacaaaaagttgtactatgattttgtgaaggaca 8067061  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 17350204 - 17350141
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| |||| |||||| |||| ||||| |||||||||||||||||    
T  17350204 tcccttaacttatttttggttttcaatttgttcccct-aact-ataaagtgtctcaatttggtccc 17350141  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 688
Target Start/End: Complemental strand, 19253099 - 19253041
Alignment:
Q  628 taacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||| || |||| |||||||||||||  | |||||||||||||||||| ||||    
T  19253099 taacttatttttggttttcaatttggtcccctaa--ttataaaatgtctcaatttgatccc 19253041  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 30043924 - 30043879
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataac 130  Q
    |||||||||| | ||||||||||| || ||||||||||||||||||    
T  30043924 atacaattttcgatggacaaaaaattaattttgtattttagataac 30043879  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 42547451 - 42547390
Alignment:
Q  97 gtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgt 158  Q
    |||||||||||  || |||||||| || |||||| || |||||||||||||| |||||||||    
T  42547451 gtggacaaaaagttaattttgtatatttgataacttgtacgtgagacaaaaagttgtgttgt 42547390  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 44116931 - 44117000
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtg 154  Q
    |||| |||||||  ||||||||  |||||||||||||||||| ||| || ||||| |||||||| |||||    
T  44116931 atacgatttttgagggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtg 44117000  T

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Target: chr8 (Bit Score: 55; Significance: 3e-22; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 22756521 - 22756419
Alignment:
Q  89 aatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatgattt 188  Q
    ||||||||||||| |||||||||||||||||||||||||||| || |||||| ||||||| |||||||||| | || ||| ||| ||| ||||||| |||    
T  22756521 aatttttggtggataaaaaactatttttgtattttagataacttgtacgtgatacaaaaagttgtgttgtggtataatgagggataaaaatttatgtttt 22756422  T
Q  189 tgt 191  Q
    |||    
T  22756421 tgt 22756419  T

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Target: chr8; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 16595263 - 16595172
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||| || ||||| |||||||| ||||||||||  |||| || |||||||    
T  16595263 atacgatttttggtgaacaaaaagctatttttgtattttagataacttgtacgtgggacaaaaagttgtgttgtggattagcgagggacaaa 16595172  T

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Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 43386804 - 43386741
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||||||    
T  43386804 tcccttaacttatttttggttttcagtttggtcccct-aact-ataaaatgtctcaatttggtccc 43386741  T

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Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 6386567 - 6386658
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || |||||||||||||| |||||||||| ||| |||| |||||||    
T  6386567 atacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaa 6386658  T

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Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 29672437 - 29672346
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||||||| || ||||| |||||||| |||||||||| ||| |||| |||||||    
T  29672437 atacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaa 29672346  T

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Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 36426355 - 36426270
Alignment:
Q  91 tttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||| |||||||||| |||||||| |||||||||| ||| || | ||||||||||||  ||||||||| |||||| || ||||||    
T  36426355 ttttttgtggacaaaagactattttggtattttagacaacttgtatgtgagacaaaaagatgtgttgtggtttagtaaatgacaaa 36426270  T

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Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 15001481 - 15001553
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatattt 181  Q
    ||||||| |||||||||||||| || ||||| |||||||| |||||||||| ||| |||| ||||||| ||||    
T  15001481 ctattttggtattttagataacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaaaattt 15001553  T

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Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 13407049 - 13406958
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||| | ||||||  ||||||| |||||||||| ||| || ||||||||||||||||| || |||| ||| |||| |||||||    
T  13407049 atacgatttttggggcacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaaattatgctgtggtttggtgagggacaaa 13406958  T

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Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 14005158 - 14005067
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||||||  |||||||||   |||||| |||||||||| ||| || ||||| |||||||| |||||||||| ||| |||| |||||||    
T  14005158 atacaattttttatggacaaaatgttattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgatggacaaa 14005067  T

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Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 619 - 686
Target Start/End: Complemental strand, 37324794 - 37324729
Alignment:
Q  619 ttaatcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtc 686  Q
    ||||||||||||||||||||| || || | ||||||||||| |||| |||||||||||||||||||||    
T  37324794 ttaatcccttaacttatttttggtttttaatttggtcccct-aact-ataaaatgtctcaatttggtc 37324729  T

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Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 37618506 - 37618415
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||| |||| |||  ||||||| |||||| | | ||| || |||||||||||||| |||||||||| ||| |||| |||||||    
T  37618506 atacaatttttgggggacgaaatgctattttggtatttaaaacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaa 37618415  T

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Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 39642874 - 39642965
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||| |||  |||  ||||||| |||||||||| |||||| ||||| |||| ||| |||||||||| ||| |||| |||||||    
T  39642874 atacaatttttgggggatgaaatgctattttggtattttagacaacctgtacgtgggacagaaagttgtgttgtggtttggtgagggacaaa 39642965  T

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Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 54189 - 54275
Alignment:
Q  113 ttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatgattttgtaatgtccc 199  Q
    ||||||||||| |||||| || | ||| |||||||| ||||| |||| |||||  ||||||||| ||||||| |||||| |||||||    
T  54189 ttttgtattttcgataacttgtatgtgggacaaaaagttgtgatgtggtttagcaaaggacaaaaatttatgtttttgtcatgtccc 54275  T

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Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 24068344 - 24068407
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  24068344 tcccttaacttatttttggttttcattttggtcccct-aact-ataaagtgtctcaatttggtccc 24068407  T

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Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 41868018 - 41867955
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||| ||||||||||| |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  41868018 tcccttaatttatttttagttttcactttggtcccct-aact-ataaagtgtctcaatttggtccc 41867955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 3801039 - 3800951
Alignment:
Q  103 aaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatgattttgt 191  Q
    ||||||||||||||||||||||||||||  | | |||| ||||||| ||||| |||| |||| ||| | ||||| | ||||| ||||||    
T  3801039 aaaaaactatttttgtattttagataactagtatgtgaaacaaaaagttgtgatgtggtttaatgaggaacaaaaacttatgtttttgt 3800951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 625 - 688
Target Start/End: Complemental strand, 31625484 - 31625423
Alignment:
Q  625 ccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||| || |||| |||||||||||||  | ||||| |||||||||||||||||    
T  31625484 ccttaacttatttttggttttcaatttggtcccctaa--ttataaagtgtctcaatttggtccc 31625423  T

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Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 688
Target Start/End: Original strand, 117061 - 117125
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||| || |||| |||||||||||||  | ||||||||| |||||||| ||||    
T  117061 atcccttaacttatttttggttttcattttggtcccctaa--ttataaaatgtttcaatttgatccc 117125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 10656800 - 10656709
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||| |||||||||    ||||||  ||||||||| ||  || |||||||||||||| |||||||||| ||| ||||||||||||    
T  10656800 atacgattttttgtggacaaattgttattttgatattttagacaatttgtacgtgagacaaaaagttgtgttgtggttttgtgaaggacaaa 10656709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 41709768 - 41709859
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||||||| || ||||  |||||||| ||||| |||| ||| |||| |||||||    
T  41709768 atacgatttttgagggacaaaatgctattttggtattttagataacttgtacgttggacaaaaagttgtgctgtggtttggtgagggacaaa 41709859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 7394903 - 7394837
Alignment:
Q  110 tatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||| |||||||||| ||| || |||||||||||||| ||||||| || ||| |||| |||||||    
T  7394903 tattttggtattttagacaacttgtacgtgagacaaaaagttgtgttatggtttggtgagggacaaa 7394837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 622 - 688
Target Start/End: Complemental strand, 43278024 - 43277960
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||||  | || | ||||||||||||| ||| ||||||||||||||||||||||    
T  43278024 atcccttaacttattttttatttttaatttggtcccctaa-cta-taaaatgtctcaatttggtccc 43277960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 31623920 - 31623983
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| ||| |||||||||||||    
T  31623920 tcccttaacttatttttggttttcaatttggtcccct-aact-ataaagtgtttcaatttggtccc 31623983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 35943921 - 35943985
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| |||||| |||| || ||  |||||||||||||||||||||    
T  35943921 tcccttaacttatttttggttttcattttggt-cccttaattataaaaatgtctcaatttggtccc 35943985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 38591109 - 38591046
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||  | |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  38591109 tcccttaacttatttttgattttcaatttggtcccct-aact-ataaagtgtctcaatttggtccc 38591046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 7396263 - 7396173
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaa 175  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||||| || |||||||||||||| |||||| ||| |||||||| ||||||    
T  7396263 ataccatttttgatggacaaaacactatttttgtattttagataacttgtacgtgagacaaaaagttgtgtagtggtttagtgagggacaa 7396173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 29424699 - 29424602
Alignment:
Q  91 tttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatgatttt 189  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||  | | ||||||||||||||  |||||||| ||||||| ||||||| ||||    
T  29424699 tttttggtggacaaaaaactatttttgtattttagataacttgtacgtaggtctaaaaattgtgttgtcgtttagtgatggacaaa-atttatgttttt 29424602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 10959991 - 10960082
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||| ||||||||  |||||||||||||||||| ||| || ||||| |||||||| |||||||||| |||  ||| |||||||    
T  10959991 atacgatttttgggggacaaaatgctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgttgagggacaaa 10960082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 31870231 - 31870147
Alignment:
Q  92 ttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||| |||| |||  |||||||||||||||||| |||||  ||||| |||||||| |||||||||| ||| |||| |||||||    
T  31870231 ttttgggggacgaaatgctatttttgtattttagacaacctatacgtgggacaaaaagttgtgttgtggtttggtgagggacaaa 31870147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 10324249 - 10324158
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||| | ||||||||   |||||| |||||||||| ||| || |||||||||||||| |||||||||| ||| |||| |||||||    
T  10324249 atacgattttttggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaa 10324158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 11279143 - 11279210
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||| |||||||||| ||| || |||||||||||||| |||||||||| ||| |||| |||||||    
T  11279143 ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaa 11279210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 11382055 - 11382138
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || |||||||||||||| |||||||||| ||| ||||    
T  11382055 atacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtga 11382138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 622 - 688
Target Start/End: Original strand, 18773667 - 18773731
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||| |  |||| |||||||||||||  | |||||||||||||||||||||||    
T  18773667 atcccttaacttatttttggatttcattttggtcccctaa--ttataaaatgtctcaatttggtccc 18773731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 622 - 688
Target Start/End: Complemental strand, 22300006 - 22299942
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  22300006 atcccttaacttatttttggttttcactttggtcccct-aact-ataaagtgtctcaatttggtccc 22299942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 9927620 - 9927683
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || || ||||||||||||| |||| ||||| |||||||||||||||||    
T  9927620 tcccttaacttattttttgtttttagtttggtcccct-aact-ataaagtgtctcaatttggtccc 9927683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 27824783 - 27824714
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtg 159  Q
    ||||||| |||||||||| ||||||||||||||| ||||||  | ||||| |||||||| ||||| ||||    
T  27824783 atttttgttggacaaaaagctatttttgtattttggataactcgtacgtgggacaaaaagttgtgatgtg 27824714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 11212273 - 11212339
Alignment:
Q  110 tatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||| |||||||||| ||| ||||||||||||||||  || ||||||| ||| |||| |||||||    
T  11212273 tattttggtattttagacaacttgcacgtgagacaaaaggttatgttgtggtttggtgagggacaaa 11212339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 8342727 - 8342694
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtatttt 123  Q
    |||||| |||||||||||||||||||||||||||    
T  8342727 atttttagtggacaaaaaactatttttgtatttt 8342694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 8412418 - 8412355
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||| ||||||| |||| ||||| |||||||||||||||||    
T  8412418 tcccttaacttattttttgttttcaatttagtcccct-aact-ataaagtgtctcaatttggtccc 8412355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 31738377 - 31738440
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| ||| |||||||||||||    
T  31738377 tcccttaacttatttttggttttcaatttggtcccct-aact-ataaagtgtttcaatttggtccc 31738440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 32614076 - 32614031
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataac 130  Q
    |||| ||||||||||||||||||  ||||||| |||||||||||||    
T  32614076 atacgatttttggtggacaaaaagttatttttatattttagataac 32614031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 17031153 - 17031254
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatgatttt 189  Q
    |||||| ||||||||||| |||||||||||||||| ||||| || ||||| ||| |||| ||||| ||||||||| ||| || |||| ||||||| ||||    
T  17031153 attttttgtggacaaaaagctatttttgtattttaaataacttgtacgtgggacgaaaagttgtgctgtgatttaatgaggggcaaaaatttatgttttt 17031252  T
Q  190 gt 191  Q
    ||    
T  17031253 gt 17031254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 700701 - 700623
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    ||||| || |||||||| | |||||| |||||||||||||| || |||||||||||||| |||||||||| ||| ||||    
T  700701 attttcgggggacaaaataatattttggtattttagataacttgtacgtgagacaaaaagttgtgttgtggtttggtga 700623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 21739266 - 21739175
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||  ||||||||  ||||||| |||||||||| ||| || ||||| |||||||| ||||| |||| ||| |||| |||||||    
T  21739266 atacaatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaa 21739175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 22432414 - 22432323
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||| |||| |||  ||||||| |||||||||| ||| || || |||||||||||||||||||||| |||  ||| |||||||    
T  22432414 atacgatttttgggggacgaaatgctattttggtattttagacaacttgtacttgagacaaaaaattgtgttgtggtttgatgagggacaaa 22432323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 27839178 - 27839079
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatg 184  Q
    |||| |||||||| ||||||||  ||||||| |||||||||| ||| || || ||||||||||| |||| || || ||| |||| ||||||| |||||||    
T  27839178 atacgatttttggaggacaaaaggctattttggtattttagacaacttgtacatgagacaaaaagttgttttatggtttggtgagggacaaaaatttatg 27839079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 39918498 - 39918589
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||| ||||||||   |||||| |||||||||| ||| || |||||||||||||| ||||| |||| ||| |||| |||||||    
T  39918498 atacgatttttgggggacaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaa 39918589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 41790567 - 41790476
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||| ||||||||   |||||| |||||||||| ||  || |||||||||||||| |||||||||| ||| |||| |||||||    
T  41790567 atacgatttttgggggacaaaatgttattttagtattttagacaatttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaa 41790476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 687
Target Start/End: Complemental strand, 12936204 - 12936142
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtcc 687  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| ||||||||||||||||    
T  12936204 tcccttaacttatttttggttttcattttggtcccct-aact-ataaagtgtctcaatttggtcc 12936142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 7208311 - 7208244
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||| |||||||||| ||| || |||||||||||||| ||||| |||| ||| |||| |||||||    
T  7208311 ctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaa 7208244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 28090625 - 28090534
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||   ||||||||||||||||| ||| || ||||| |||||||| |||||||||  ||| |||| |||||||    
T  28090625 atacgatttttgagggacaaaatgttatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtagtttggtgagggacaaa 28090534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 40489328 - 40489419
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||  ||||||||   |||||| |||||||||| ||| || | ||| |||||||| ||||| |||||||| |||| |||||||    
T  40489328 atacaatttttgagggacaaaatgttattttggtattttagacaacttgtatgtgggacaaaaagttgtgctgtgatttggtgagggacaaa 40489419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 4689778 - 4689712
Alignment:
Q  110 tatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||||||  ||| || ||||| |||||||| |||||||||| ||| |||| |||||||    
T  4689778 tatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgttgtggtttggtgagggacaaa 4689712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 5061042 - 5061105
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| |  |||| |||||||||||||  | ||||| |||||||||||||||||    
T  5061042 tcccttaacttatttttggatttcattttggtcccctaa--tgataaagtgtctcaatttggtccc 5061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 7770359 - 7770293
Alignment:
Q  110 tatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||||||  ||| || ||||| |||||||| ||||| |||| ||| ||||||||||||    
T  7770359 tatttttgtattttaggcaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaa 7770293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 18677990 - 18678053
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| |||| |||||| |||| ||||| |||||||||||||||||    
T  18677990 tcccttaacttatttttggttttcactttgatcccct-aact-ataaagtgtctcaatttggtccc 18678053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 21387651 - 21387714
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||    |||| ||||||||||||| ||| ||||||||||||||||||||||    
T  21387651 tcccttaacttatttttgaatttcattttggtcccctaa-cta-taaaatgtctcaatttggtccc 21387714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 2761715 - 2761647
Alignment:
Q  100 gacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    |||||||| |||||||||||||||||||||  || || |||||||||||||||||||||| ||||||||    
T  2761715 gacaaaaatctatttttgtattttagataatttgtacttgagacaaaaaattgtgttgtggtttagtga 2761647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 6711220 - 6711129
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || ||||| ||||||||||||||||||| ||| |||| |||||||    
T  6711220 atacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaa 6711129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 17327823 - 17327732
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||| |||||||| | |||||| |||||||||||||  || || ||||||||||| ||||| |||||||| |||| |||||||    
T  17327823 atacgatttttgggggacaaaatattattttggtattttagataatttgtacatgagacaaaaagttgtgctgtgatttggtgagggacaaa 17327732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 41968023 - 41967932
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||||||||  |||||||  ||||||| |||||||||| ||| || |||||||||||||| |||||||||| ||| || | |||||||    
T  41968023 atacaatttttgggagacaaaaggctattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtaagggacaaa 41967932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 1601178 - 1601264
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||||||||||||  ||||||| |||||||||| ||| || | ||| |||||||| |||||||||| ||| |||| |||||||    
T  1601178 atttttggtggacaaaatgctattttggtattttagacaacttgtatgtgggacaaaaagttgtgttgtggtttggtgagggacaaa 1601264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 50540349 - 50540435
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||| ||||||||  ||||||| |||||||||| ||| || ||||| |||||||| |||||||||| |||  |||||||||||    
T  50540349 atttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgttgtggtttgatgaaggacaaa 50540435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 4895393 - 4895462
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgtt 156  Q
    |||| |||||||||| |||||||| |||||||||||||||||| || |  ||||||||||||||||| ||||    
T  4895393 atacgatttttggtgaacaaaaaattatttttgtattttagatgacat--acgtgagacaaaaaattatgtt 4895462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 52030374 - 52030334
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataac 130  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  52030374 attttttgtggacaaaaaactatttttgtattttagataac 52030334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 16476329 - 16476238
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||| ||||||||  ||||||| |||||||||| ||| || ||||| |||||||| |||||  ||| ||| |||| |||||||    
T  16476329 atacaatttttgggggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaagttgtgccgtggtttggtgagggacaaa 16476238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 50382552 - 50382481
Alignment:
Q  110 tatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatattt 181  Q
    ||||||||| ||||||| ||| || ||||| |||||||| |||||||||| ||| |||||||||||| ||||    
T  50382552 tatttttgtgttttagacaacttgtacgtgggacaaaaagttgtgttgtggtttggtgaaggacaaaaattt 50382481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 622 - 688
Target Start/End: Original strand, 13641270 - 13641334
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  13641270 atcccttaacttatttttggttttcactttggtcccct-aact-ataaagtgtctcaatttggtccc 13641334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 25785982 - 25786045
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  25785982 tcccttaacttatttttggttttcaatttggtcccct-aact-ataaagtgtctcaatttggtccc 25786045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 13994225 - 13994153
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatattt 181  Q
    ||||||| |||||||||| ||| || || ||||||||||| |||||||||| ||| |||| ||||||| ||||    
T  13994225 ctattttggtattttagacaacttgtacatgagacaaaaagttgtgttgtggtttggtgagggacaaaaattt 13994153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 30798865 - 30798821
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataa 129  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||    
T  30798865 atacgatttttggtggacaacaaactattttggtattttagataa 30798821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 686
Target Start/End: Complemental strand, 25787266 - 25787205
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtc 686  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||    
T  25787266 tcccttaacttatttttggttttcaatttggtcccct-aact-ataaagtgtctcaatttggtc 25787205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 28340477 - 28340386
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || |||||||||||||| ||||| |||| |||  ||| |||||||    
T  28340477 atacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttgatgagggacaaa 28340386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 504560 - 504482
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    |||||||||| ||||||| ||| ||| |||||||||| ||| |  | ||| |||||||||||||||| || ||||||||    
T  504560 atttttggtgaacaaaaagctactttggtattttagacaacttctatgtgggacaaaaaattgtgttatggtttagtga 504482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 16643331 - 16643273
Alignment:
Q  110 tatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    ||||||||||||||||| |||||| | ||| |||||||| |||||| ||||||| ||||    
T  16643331 tatttttgtattttagacaacctgtatgtgggacaaaaagttgtgtcgtgatttggtga 16643273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 46447669 - 46447743
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgattta 164  Q
    ||||||| ||||||||| ||||||||  ||||||||||||| || |||||  ||||||| ||||| ||| |||||    
T  46447669 atttttgatggacaaaagactattttgatattttagataacttgtacgtggaacaaaaagttgtgatgtaattta 46447743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 51374471 - 51374405
Alignment:
Q  101 acaaaaaactatttttgtattttagataacctgcacgtgagac-aaaaaattgtgttgtgatttagt 166  Q
    |||||||||||||||| ||||||||| ||| || || ||| || ||||||||||||||| |||||||    
T  51374471 acaaaaaactatttttatattttagacaacttgaacatgatacaaaaaaattgtgttgtaatttagt 51374405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 13929309 - 13929372
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| |||||| |||| |||| ||||| |||||||||||||||||    
T  13929309 tcccttaacttatttttggttttcaatttggt-cccttaact-ataaagtgtctcaatttggtccc 13929372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 13930777 - 13930714
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| |||||||| || |||| ||||| |||||||||||||||||    
T  13930777 tcccttaacttatttttggttttcaatttggtcctct-aact-ataaagtgtctcaatttggtccc 13930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 26056249 - 26056186
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| |  |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  26056249 tcccttaacttatttttggatttcattttggtcccct-aact-ataaagtgtctcaatttggtccc 26056186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 688
Target Start/End: Original strand, 48934251 - 48934318
Alignment:
Q  619 ttaatcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||||||  |  |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  48934251 ttaatcccttaacttattttcggatttcattttggtcccct-aact-ataaagtgtctcaatttggtccc 48934318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 50679923 - 50679860
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||||| || | |||||| |||| |||| ||||| |||||||||||||||||    
T  50679923 tcccttaacttatttttagtttttattttggt-cccttaact-ataaagtgtctcaatttggtccc 50679860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 15168 - 15254
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||| |||||||| |||||||| |||||||||| ||| || |||||||||||||| |||||||||| ||| |||  |||||||    
T  15168 atttttgggggacaaaatactattttagtattttagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgggggacaaa 15254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 23420 - 23483
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||||||    
T  23420 tcccttaacttatttttggttttcagtttggtcccct-aact-ataaaatgtctcaatttggtccc 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 24917 - 24854
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||| |||||||| || ||||||||||||||||||  | ||||| ||| |||||||||||||    
T  24917 tcccttaatttatttttggttttcagtttggtcccctaa--ttataaagtgtttcaatttggtccc 24854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 29992794 - 29992732
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaa 148  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||| || ||||||||||||||    
T  29992794 atacgatttttggtggacaaaaaattatttt-gtattttagataacttgtacgtgagacaaaaa 29992732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 32873869 - 32873778
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||| ||| ||| || |||||||||||||| |||||||||| ||| ||||||||||||    
T  32873869 atacgatttttgagggacaaaatgctattttggtatttcagacaacttgtacgtgagacaaaaagttgtgttgtggtttggtgaaggacaaa 32873778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 46627165 - 46627239
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtg 159  Q
    |||||||||||||  ||| ||| ||||||||||||||||||| || | | |||||||||||||||||||| ||||    
T  46627165 atacaatttttgggagacgaaatactatttttgtattttagacaatccgtacgtgagacaaaaaattgtgctgtg 46627239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 4858446 - 4858383
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||||| |||| |||| |||||| |||| |||||||||||||||||||||||    
T  4858446 tcccttaacttatttttagttttcactttgatcccct-aact-ataaaatgtctcaatttggtccc 4858383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 2048947 - 2049057
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatg 184  Q
    |||||||||||  ||||||||| ||||||||||||||||  ||||| |  ||||| |||||||  || ||||||| |||||||| ||||||| ||||||     
T  2048947 atacaattttttatggacaaaa-actatttttgtattttttataacttctacgtgggacaaaatgttttgttgtggtttagtgatggacaaaaatttata 2049045  T
Q  185 attttgtaatgt 196  Q
     |||||| ||||    
T  2049046 tttttgttatgt 2049057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 47316798 - 47316707
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| ||| |||||| ||| |||| |||||||||||| |||||||||| ||| |||| |||||||    
T  47316798 atacgatttttgagggacaaaatgctattttggtaatttagacaacttgcatgtgagacaaaaagttgtgttgtggtttggtgagggacaaa 47316707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 622 - 688
Target Start/End: Original strand, 4857214 - 4857278
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||| || |||| ||||||||||| |||| |||||||||||| ||||||||||    
T  4857214 atcccttaacttatttttggttttcactttggtcccct-aact-ataaaatgtctcgatttggtccc 4857278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 19279714 - 19279651
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  19279714 tcccttaacttatttttggttttcactttggtcccct-aact-ataaagtgtctcaatttggtccc 19279651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 17237106 - 17237162
Alignment:
Q  120 ttttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||  || |||||||||||||| |||||||||| ||||||||| ||||||    
T  17237106 ttttagataatttgtacgtgagacaaaaagttgtgttgtggtttagtgaatgacaaa 17237162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 21408706 - 21408634
Alignment:
Q  105 aaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaat 177  Q
    |||||||||||||||||||||||||| || || ||| | ||||| || ||||||| |||| ||| ||||||||    
T  21408706 aaaactatttttgtattttagataacttgtacatgaaataaaaagttatgttgtggtttaatgagggacaaat 21408634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 38360070 - 38360138
Alignment:
Q  89 aatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttg 157  Q
    |||||||| ||||||||| | ||||||||||||||| | ||| || | ||||||||||||||| |||||    
T  38360070 aatttttgttggacaaaatattatttttgtattttaaacaacttgtaggtgagacaaaaaattatgttg 38360138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 687
Target Start/End: Complemental strand, 40926621 - 40926559
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtcc 687  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||| ||||||||||||||||    
T  40926621 tcccttaacttatttttggttttcactttggtcccct-aact-ataaagtgtctcaatttggtcc 40926559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 625 - 685
Target Start/End: Complemental strand, 45721866 - 45721808
Alignment:
Q  625 ccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggt 685  Q
    |||||||||||||||||| |||| ||||||||||| |||| ||||| ||||||||||||||    
T  45721866 ccttaacttatttttagttttcattttggtcccct-aact-ataaagtgtctcaatttggt 45721808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 1363655 - 1363722
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||||| || |||||| |||||||||||||| ||||| |||| |||  ||| |||||||    
T  1363655 ctatttttgtatttttgacaacctgtacgtgagacaaaaagttgtgatgtggtttgatgagggacaaa 1363722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 3922803 - 3922720
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtga 168  Q
    |||| |||||||  ||||||||  ||||||| |||||||||||||| || ||||| |||||||| ||||| |||| ||| ||||    
T  3922803 atacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggacaaaaagttgtgctgtggtttggtga 3922720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 29661318 - 29661409
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||||||| || ||||| || ||||| ||||| |||| ||| |||| |||||||    
T  29661318 atacgatttttgtgggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgctgtggtttggtgagggacaaa 29661409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 41665651 - 41665584
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||||||||||||| ||| || |||||||||||||| ||||| |||| ||| | || |||||||    
T  41665651 ctatttttgtattttagacaacttgtacgtgagacaaaaagttgtgatgtggtttggcgagggacaaa 41665584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 30052940 - 30053030
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaa 175  Q
    |||||||||||| || ||||| |||||||||  ||||||||| ||| |  | | ||||||||||||| ||  ||| |||||||||||||||    
T  30052940 atacaatttttgatgaacaaacaactattttgatattttagacaacttatatgcgagacaaaaaattatgccgtgttttagtgaaggacaa 30053030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 689
Target Start/End: Original strand, 43006399 - 43006463
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtcccc 689  Q
    ||||||||||||||||| || |||| ||||||||||| |||| || || ||||||||||||||||||    
T  43006399 tcccttaacttatttttggttttcaatttggtcccct-aact-attaagtgtctcaatttggtcccc 43006463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 11822268 - 11822309
Alignment:
Q  135 acgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||| |||||||| |||||||||| ||||||||||||||||    
T  11822268 acgtgggacaaaaagttgtgttgtggtttagtgaaggacaaa 11822309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 17288322 - 17288259
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || || | ||||||||||| |||| ||||| |||||||||||||||||    
T  17288322 tcccttaacttattttttgttttaattttggtcccct-aact-ataaagtgtctcaatttggtccc 17288259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 22061897 - 22061834
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||  || |||| ||||||||||| |||| |||||| ||||||||||||||||    
T  22061897 tcccttaacttattttgtgttttcaatttggtcccct-aact-ataaaacgtctcaatttggtccc 22061834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 41126253 - 41126316
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||| ||  |||| ||||||||||| |||| ||||| |||||||||||||||||    
T  41126253 tcccttaacttattttcagatttcattttggtcccct-aact-ataaagtgtctcaatttggtccc 41126316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 660
Target Start/End: Complemental strand, 44114757 - 44114720
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtccccta 660  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  44114757 tcccttaacttatttttagttttcattttggtccccta 44114720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 48445521 - 48445630
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatatttatgatttt 189  Q
    |||||||| ||||||||   |||||| || ||||||| ||| || | | |||||||||| ||||  |||||||| |||||||||||| ||||  | ||||    
T  48445521 atttttgggggacaaaatgttattttcgtgttttagacaacttgtatgcgagacaaaaagttgtcctgtgatttggtgaaggacaaaaatttcagttttt 48445620  T
Q  190 gtaatgtccc 199  Q
    || |||||||    
T  48445621 gtcatgtccc 48445630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 35114776 - 35114867
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || ||||| ||||||||||||||||||| ||| |||| |||||||    
T  35114776 atacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgttgtggtttggtgagggacaaa 35114867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 40832568 - 40832477
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||| |||| ||| |||||||| ||||||||||  || || |||||||||||||| |||||||||| ||| |||| |||||||    
T  40832568 atacgatttttgggggacgaaatactattttggtattttagactacttgtacgtgagacaaaaagttgtgttgtggtttggtgagggacaaa 40832477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 26796225 - 26796308
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggaca 174  Q
    ||||||||||||||||| |||| ||| |||||||||| ||| || ||||| |||||||| ||| |||||| |||||||| |||||    
T  26796225 atttttggtggacaaaagacta-tttggtattttagacaacttgtacgtgtgacaaaaagttgcgttgtgctttagtgagggaca 26796308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 1230902 - 1230993
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| ||| ||||||||||||||  |||||||||||||||| |||  || || ||||||||||| ||| | |||| ||||||||| ||||||    
T  1230902 atactattgttggtggacaaaaagatatttttgtattttaggtaatttgtacatgagacaaaaagttgagatgtggtttagtgaaagacaaa 1230993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 5278933 - 5278842
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || ||||| |||||||||||||| |||| ||| |||| |||||||    
T  5278933 atacgatttttgaaggacaaaatgctattttggtattttagacaacttgtacgtgggacaaaaaattgtgctgtggtttggtgagggacaaa 5278842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 7761672 - 7761581
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||| || |||||||||||||| ||||| |||| ||| |||| |||||||    
T  7761672 atacgatttttgagggacaaaatgctattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaa 7761581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 41366184 - 41366113
Alignment:
Q  110 tatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaatattt 181  Q
    |||||| |||||||||| ||| || | ||||||||||||||||||||||| ||| |||| ||||||| ||||    
T  41366184 tattttggtattttagacaacttgtatgtgagacaaaaaattgtgttgtggtttggtgagggacaaaaattt 41366113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 44284620 - 44284711
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  |||||||  ||||||||| ||| || |||||||||||||| ||||| |||| |||||||| |||||||    
T  44284620 atacgatttttgagggacaaaatgctattttgttattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttagtgagggacaaa 44284711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 30326430 - 30326356
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtg 159  Q
    |||| |||||||  |||||||| |||||||| |||||||||| ||| || |||||||||||||| ||||| ||||    
T  30326430 atacgatttttgagggacaaaatactattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtg 30326356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 41934577 - 41934662
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaa 175  Q
    |||||||||||||||||   |||||| |||||||||| ||| |  ||||  |||||||| |||||||||| |||||||||| ||||    
T  41934577 atttttggtggacaaaatgttattttggtattttagacaacttatacgtaggacaaaaagttgtgttgtggtttagtgaagtacaa 41934662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 7258887 - 7258979
Alignment:
Q  85 atacaatttttggtggacaaaaaact-atttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||  |||||||||  | ||||| |||||||||| ||| || |||||||||||||| ||||| |||| ||| |||| |||||||    
T  7258887 atacaatttttgagggacaaaaatgttattttggtattttagacaacttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaa 7258979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 10399962 - 10399878
Alignment:
Q  92 ttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||| ||||||||  ||||||| |  ||||||| ||| |  || ||||||||||| |||||||||| ||||||||||||||||    
T  10399962 ttttgggggacaaaatgctattttggatttttagacaacttatacatgagacaaaaagttgtgttgtggtttagtgaaggacaaa 10399878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 16104265 - 16104356
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||| ||  || |||||||||||||| ||||| |||| ||| |||| |||||||    
T  16104265 atacgatttttgagggacaaaatgctattttggtattttagacaatttgtacgtgagacaaaaagttgtgctgtggtttggtgagggacaaa 16104356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 28824632 - 28824565
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||| |||||||||| ||| ||||||||||| ||||| ||||| |||| ||| |||| |||||||    
T  28824632 ctattttagtattttagacaacttgcacgtgagataaaaagttgtgatgtggtttggtgagggacaaa 28824565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 30798588 - 30798497
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||| |||||||  ||||||||  ||||||| |||||||||||||| || ||||| || ||||| ||||| |||| ||| |||| |||||||    
T  30798588 atacgatttttgagggacaaaatgctattttggtattttagataacttgtacgtgggataaaaagttgtgatgtggtttggtgagggacaaa 30798497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 12939394 - 12939308
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||||| ||||||||   |||||| |||| ||||| ||| || |||||||| ||||| ||||| |||| ||| ||||||||||||    
T  12939394 atttttgggggacaaaatgttattttggtatcttagacaacttgtacgtgagataaaaagttgtgctgtggtttggtgaaggacaaa 12939308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 16177982 - 16177908
Alignment:
Q  85 atacaatttttggtggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtg 159  Q
    |||| |||||||| |||| |||  | ||||| |||||||||| ||| || |||||||||||||| ||||||||||    
T  16177982 atacgatttttgggggacgaaattccattttggtattttagacaacttgtacgtgagacaaaaagttgtgttgtg 16177908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 661
Target Start/End: Complemental strand, 23178984 - 23178946
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaa 661  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  23178984 tcccttaacttatttttagttttcactttggtcccctaa 23178946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 661
Target Start/End: Complemental strand, 23590241 - 23590203
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaa 661  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  23590241 tcccttaacttatttttagttttcactttggtcccctaa 23590203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 38993146 - 38993096
Alignment:
Q  109 ctatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtg 159  Q
    |||||||||||||||||| ||| || ||||| |||||||| ||||||||||    
T  38993146 ctatttttgtattttagacaacttgtacgtgggacaaaaagttgtgttgtg 38993096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 2394265 - 2394302
Alignment:
Q  89 aatttttggtggacaaaaaactatttttgtattttaga 126  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  2394265 aatttttggaggacaaaaaactattattgtattttaga 2394302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 12854206 - 12854143
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||||  |||| |||||| |||| |||| ||||| |||||||||||||||||    
T  12854206 tcccttaacttatttttagatttcattttggt-cccttaact-ataaagtgtctcaatttggtccc 12854143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 23177687 - 23177751
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||| |||||||| || |||| ||||||||||  ||||| |||| |||||||||||||||||    
T  23177687 tcccttaatttatttttggttttcattttggtccccctaacta-taaagtgtctcaatttggtccc 23177751  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 23588944 - 23589008
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||| |||||||| || |||| ||||||||||  ||||| |||| |||||||||||||||||    
T  23588944 tcccttaatttatttttggttttcattttggtccccctaacta-taaagtgtctcaatttggtccc 23589008  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Original strand, 37867770 - 37867833
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| |||| |||||| |||| ||||| |||||||||||||||||    
T  37867770 tcccttaacttatttttggttttcaatttgatcccct-aact-ataaagtgtctcaatttggtccc 37867833  T

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Target: scaffold0084 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 622 - 688
Target Start/End: Complemental strand, 13307 - 13243
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    |||||||||||||||||| || |||||||||||||||| |||| ||||||||||||||||| |||||    
T  13307 atcccttaacttatttttggttttcagtttggtcccct-aact-ataaaatgtctcaatttcgtccc 13243  T

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Target: scaffold0208 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 2429 - 2352
Alignment:
Q  99 ggacaaaaaactatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    ||||||||||||||||| |||||||||| ||| || ||||| |||||||| ||||| |||| ||| |||| |||||||    
T  2429 ggacaaaaaactattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgagggacaaa 2352  T

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Target: scaffold0062 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 3728 - 3688
Alignment:
Q  90 atttttggtggacaaaaaactatttttgtattttagataac 130  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  3728 atttttggtggataaaaaactatttttgtattttagataac 3688  T

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Target: scaffold0077 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 168
Target Start/End: Complemental strand, 7563 - 7480
Alignment:
Q  89 aatttttggtggacaaaaaa-ctatttttgtattttagataacctgcacgtgagacaaaaaa---ttgtgttgtgatttagtga 168  Q
    |||||||  ||||||||||| ||||||| |||||||||| |||  | |||||||||||||||   |||||||||||||||||||    
T  7563 aatttttaatggacaaaaaatctattttggtattttagacaactcgtacgtgagacaaaaaaatcttgtgttgtgatttagtga 7480  T

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Target: scaffold0178 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 2367 - 2304
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtccc 688  Q
    ||||||||||||||||| || |||| |||||||||||||  | ||||| ||| |||||||||||||    
T  2367 tcccttaacttatttttggttttcattttggtcccctaa--ttataaagtgtttcaatttggtccc 2304  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 23591 - 23657
Alignment:
Q  110 tatttttgtattttagataacctgcacgtgagacaaaaaattgtgttgtgatttagtgaaggacaaa 176  Q
    |||||| |||||||||| ||| || ||||| |||||||| ||||| |||| ||| ||||||||||||    
T  23591 tattttggtattttagacaacttgtacgtgggacaaaaagttgtgctgtggtttggtgaaggacaaa 23657  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 622 - 687
Target Start/End: Complemental strand, 96918 - 96855
Alignment:
Q  622 atcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtcc 687  Q
    |||||||||||||||||| || |||| |||| ||||||||   |||||| ||||||||||||||||    
T  96918 atcccttaacttatttttggttttcaatttgatcccctaa--caataaactgtctcaatttggtcc 96855  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 687
Target Start/End: Complemental strand, 56802 - 56740
Alignment:
Q  623 tcccttaacttatttttagtgttcagtttggtcccctaaactaataaaatgtctcaatttggtcc 687  Q
    ||||||||||||||||| |  |||| |||||||||||||  | ||||| ||||||||||||||||    
T  56802 tcccttaacttattttttgatttcactttggtcccctaa--ttataaagtgtctcaatttggtcc 56740  T

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