View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4691_high_11 (Length: 251)
Name: NF4691_high_11
Description: NF4691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4691_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 39087396 - 39087152
Alignment:
| Q |
1 |
ttgttttagtcataggttgcctactttcctagttagccaactgtcgttgccttatattggcaagacagcacaaaatatcatttattcgtatattttattt |
100 |
Q |
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| T |
39087396 |
ttgttttagtcataggtttcctactttcctagttagccaactgtcattgccttatattggcaagacagcacaaaatatcatttattcgtatattttattt |
39087297 |
T |
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| Q |
101 |
atgttatgacttttgtgaggttaagatgacacttgcttaatttaacaaggtttagcacatcttaataaacattacatattaaattcgtccatgcttttgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39087296 |
atgttatgacttttgtgaggttaagatgacacttgcttaatttaacaaggtttagcacatcttaataaacattacatattaaattcgtccatgcttttgt |
39087197 |
T |
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| Q |
201 |
tgagtaaagaacataaaatttaattttcctagtgtttcatctcac |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
39087196 |
tgagtaaagaacataaaatttaattttcctagtgtttcatttcac |
39087152 |
T |
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