View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4693-Insertion-2 (Length: 751)

Name: NF4693-Insertion-2
Description: NF4693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4693-Insertion-2
NF4693-Insertion-2
[»] chr6 (71 HSPs)
chr6 (8-751)||(27590847-27591590)
chr6 (8-751)||(27675444-27676189)
chr6 (8-499)||(27704081-27704572)
chr6 (10-499)||(26648287-26648776)
chr6 (10-499)||(26754255-26754744)
chr6 (266-746)||(27716594-27717069)
chr6 (8-499)||(28794213-28794705)
chr6 (10-499)||(26625078-26625564)
chr6 (10-499)||(26731055-26731541)
chr6 (10-505)||(26804315-26804810)
chr6 (8-499)||(28788092-28788584)
chr6 (237-751)||(31286163-31286669)
chr6 (266-751)||(27680569-27681049)
chr6 (266-746)||(27609215-27609690)
chr6 (266-747)||(27696684-27697160)
chr6 (555-748)||(28787863-28788059)
chr6 (555-748)||(28793984-28794180)
chr6 (8-208)||(27696455-27696658)
chr6 (561-751)||(27603079-27603270)
chr6 (579-746)||(27704666-27704833)
chr6 (8-186)||(27716364-27716541)
chr6 (590-751)||(26648077-26648241)
chr6 (590-751)||(26754045-26754209)
chr6 (527-751)||(26804065-26804290)
chr6 (611-751)||(26624869-26625009)
chr6 (611-751)||(26730846-26730986)
chr6 (8-208)||(27681077-27681280)
chr6 (8-208)||(27608984-27609187)
chr6 (8-431)||(26885992-26886402)
chr6 (10-159)||(31286722-31286870)
chr6 (408-505)||(27425846-27425943)
chr6 (44-147)||(27529175-27529278)
chr6 (237-446)||(26863501-26863710)
chr6 (8-144)||(27602587-27602723)
chr6 (640-751)||(26813156-26813267)
chr6 (8-151)||(26863761-26863904)
chr6 (8-144)||(26637716-26637852)
chr6 (257-505)||(26657820-26658068)
chr6 (8-144)||(26658139-26658275)
chr6 (8-144)||(26743682-26743818)
chr6 (257-505)||(26763791-26764039)
chr6 (8-144)||(26764110-26764246)
chr6 (609-748)||(26863181-26863320)
chr6 (317-429)||(27663347-27663459)
chr6 (44-200)||(27425496-27425654)
chr6 (237-499)||(26825670-26825932)
chr6 (324-453)||(26850558-26850687)
chr6 (8-100)||(25513079-25513171)
chr6 (611-742)||(27426049-27426181)
chr6 (643-707)||(27529774-27529838)
chr6 (9-144)||(25485207-25485342)
chr6 (37-123)||(26951958-26952044)
chr6 (8-125)||(25076030-25076147)
chr6 (350-431)||(26813416-26813497)
chr6 (338-431)||(27216377-27216470)
chr6 (561-746)||(27663592-27663773)
chr6 (339-505)||(26960923-26961086)
chr6 (45-144)||(25547128-25547227)
chr6 (8-151)||(26850822-26850965)
chr6 (236-431)||(27602770-27602965)
chr6 (10-151)||(26825976-26826117)
chr6 (689-746)||(26885694-26885751)
chr6 (393-505)||(25491522-25491634)
chr6 (45-144)||(26145013-26145112)
chr6 (588-739)||(26951362-26951510)
chr6 (45-95)||(26058116-26058166)
chr6 (45-95)||(26078086-26078136)
chr6 (655-739)||(25491786-25491870)
chr6 (8-92)||(25581919-25582003)
chr6 (681-746)||(26960737-26960802)
chr6 (338-431)||(27529455-27529548)
[»] chr1 (8 HSPs)
chr1 (8-751)||(266195-266924)
chr1 (8-151)||(28125557-28125700)
chr1 (8-151)||(28130595-28130738)
chr1 (8-142)||(26138096-26138230)
chr1 (239-505)||(28125749-28126015)
chr1 (552-751)||(28126064-28126259)
chr1 (681-751)||(26137489-26137559)
chr1 (411-505)||(28131740-28131834)
[»] scaffold0419 (2 HSPs)
scaffold0419 (8-499)||(9338-9831)
scaffold0419 (555-748)||(9109-9304)
[»] scaffold0277 (4 HSPs)
scaffold0277 (8-499)||(2555-3048)
scaffold0277 (8-499)||(11518-12011)
scaffold0277 (555-745)||(3081-3272)
scaffold0277 (555-745)||(12044-12235)
[»] scaffold1870 (2 HSPs)
scaffold1870 (8-499)||(619-1112)
scaffold1870 (555-748)||(391-585)
[»] chr8 (4 HSPs)
chr8 (266-746)||(29271933-29272408)
chr8 (8-208)||(29271703-29271905)
chr8 (10-329)||(22023251-22023570)
chr8 (6-58)||(35985634-35985686)
[»] chr4 (9 HSPs)
chr4 (8-446)||(18677460-18677898)
chr4 (8-446)||(18729396-18729834)
chr4 (8-446)||(18653378-18653816)
chr4 (8-446)||(18697303-18697740)
chr4 (47-446)||(18722013-18722412)
chr4 (8-446)||(18687515-18687952)
chr4 (408-504)||(18075613-18075709)
chr4 (44-200)||(18075901-18076059)
chr4 (611-742)||(18075374-18075506)
[»] scaffold0349 (3 HSPs)
scaffold0349 (8-186)||(15404-15581)
scaffold0349 (595-746)||(1957-2109)
scaffold0349 (266-375)||(15242-15351)
[»] chr2 (2 HSPs)
chr2 (237-499)||(17991277-17991539)
chr2 (8-144)||(17991083-17991219)
[»] scaffold0003 (3 HSPs)
scaffold0003 (408-505)||(61420-61517)
scaffold0003 (44-200)||(61709-61867)
scaffold0003 (611-742)||(61182-61314)


Alignment Details
Target: chr6 (Bit Score: 686; Significance: 0; HSPs: 71)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 686; E-Value: 0
Query Start/End: Original strand, 8 - 751
Target Start/End: Original strand, 27590847 - 27591590
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27590847 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 27590946  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27590947 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttt 27591046  T
Q  208 tctgttgctgaaaaagaaatcattgtacattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagact 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27591047 tctgttgctgaaaaagaaatcattgtacattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagact 27591146  T
Q  308 ttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatct 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27591147 ttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaataataagtgttttcaatct 27591246  T
Q  408 tgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaacnn 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  27591247 tgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaacaa 27591346  T
Q  508 nnnnnnnnnnnnnnnntgcatcaaccacaataaaaatctgttacagagaaatttacatgtaattaagtggaaaaatatactagtatgagatggtcatatt 607  Q
                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27591347 aaataaaaataaaaaatgcatcaaccacaataaaaatctgttacagagaaatttacatgtaattaagtggaaaaatatactagtatgagatggtcatatt 27591446  T
Q  608 tagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatca 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27591447 tagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatca 27591546  T
Q  708 tcttgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27591547 tcttgagaccataacctgcttctttctccaggctctttaggtga 27591590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 601; E-Value: 0
Query Start/End: Original strand, 8 - 751
Target Start/End: Original strand, 27675444 - 27676189
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| | |||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27675444 tgaattgtaattaaattataacaacattcaaacgataacttttctaaatttgaaaggcctgagacatcgggtatatgtgttaaatattcacaatggtcca 27675543  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27675544 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttt 27675643  T
Q  208 tctgttgctgaaaaagaaatcattgtacattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagact 307  Q
    | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27675644 tatgttggcgaaaaagaaatcattgtacattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgagagagact 27675743  T
Q  308 ttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatct 407  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27675744 ttgataaacatccttcccatttcaatgctttcaaactgcttggaagatgcttgagacctttagaacaatggccattttcaatgataagtgttttcaatct 27675843  T
Q  408 tgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaacnn 507  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||      
T  27675844 tgtcatctttttgaaggcctttcctttcttgtctattacggattccatggagtgcaaattcatacatatcatttcagttttaccagttcccttttaacaa 27675943  T
Q  508 nnnnnnnnnnnnnnnntgcatcaaccacaataaaaatctgttacagagaaatttacatgtaattaagtgg--aaaaatatactagtatgagatggtcata 605  Q
                    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||| |||||||||||||||    
T  27675944 aaataaaaataaaaaatgcatcaaccacaataaaaatcttttacagagaaatttacatgtaattaagtggaaaaaaaaatactaatatgagatggtcata 27676043  T
Q  606 tttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatat 705  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  27676044 tttagtccaaaatgagcaaaattgtattaaaactaaataacaaattgaacatagatatcaatcttactcacagtgttttctgttaaaacatgaactatat 27676143  T
Q  706 catcttgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27676144 catcttgagaccataacctgcttctttctccaggctctttaggtga 27676189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 8 - 499
Target Start/End: Original strand, 27704081 - 27704572
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||| ||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  27704081 tgaatcgtaattaaattatcacaatattcaaacgataacttttctaaatttgaaaggcctgagacatcgggtatatgtgttaaatatttacaatggtcca 27704180  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttt 207  Q
    || |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27704181 atgtcaagactgtcatatccgggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttt 27704280  T
Q  208 tctgttgctgaaaaagaaatcattgtacattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagact 307  Q
    | |||||  ||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27704281 tatgttgtcgaaaaagaaatcattgtacattataaatatatacagttataaaatgaagttatttcacttgccttgcttaaaatactagacgatagagact 27704380  T
Q  308 ttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatct 407  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27704381 ttgataaacatccttcccatttcaatgctttcaaactgcttggaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatct 27704480  T
Q  408 tgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    ||||||||| ||||||||| ||||||| | ||||||||  |||||||| ||||| ||||||||| | ||||||| | |||||| ||||||||    
T  27704481 tgtcatcttcttgaaggccattcctttttggtctattatggattccatggagtgaaaattcatatacatcatttgaattttactagttccct 27704572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 10 - 499
Target Start/End: Complemental strand, 26648776 - 26648287
Alignment:
Q  10 aattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaat 109  Q
    |||||||||||||||||||||| |   |||||| |||||||||||||||  |||  |||||||||| |||||||| |||||||||||||||  || ||||    
T  26648776 aattgtaattaaattcttacaaaacataaatgagaacttttctaaattttgaagatctgagacatcaggtatatgagttaaatattcacaacagttcaat 26648677  T
Q  110 atcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaacta-taaataaattaaaaagcaaacactatactttcatagtgatttctttt 208  Q
     |||||| | |||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  26648676 gtcaagactttcatattctggaacttctgcataaacacaa-ggaacaaacaaataaataaattaaaaatcaaacactatactctcatagtgatttgtttt 26648578  T
Q  209 ctgttgctgaaaaagaaatcattgtacatt-ataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagact 307  Q
     |||||  | |||  ||||||||||  ||| ||||||||||||| |||||||||||  |||| | |||||||||||||||||||||||| ||||||||||    
T  26648577 -tgttgacggaaacaaaatcattgtgaatttataaatatatacaattagaaaatgaagttatataacttgccttgcttaaaatactagatgatagagact 26648479  T
Q  308 ttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatct 407  Q
     |||||||||||||| |||||||||| || ||||||||||| ||||||| || |||||||||||| |||| ||||||||||||||||||||||| | | |    
T  26648478 ctgataaacatcctttccatttcaatactctcaaactgcttggaagatatttaagacctttagaaaaatgaccattttcaatgataagtgttttgagttt 26648379  T
Q  408 tgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    ||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||| ||||||||||| |||||| ||||||||    
T  26648378 tgtcatcttcttgaaggcctttcctttctggtctattacggattccatggagtggaaattcatatatatcatttcaattttactagttccct 26648287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 10 - 499
Target Start/End: Complemental strand, 26754744 - 26754255
Alignment:
Q  10 aattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaat 109  Q
    |||||||||||||||||||||| |   |||||| |||||||||||||||  |||  |||||||||| |||||||| |||||||||||||||  || ||||    
T  26754744 aattgtaattaaattcttacaaaacataaatgagaacttttctaaattttgaagatctgagacatcaggtatatgagttaaatattcacaacagttcaat 26754645  T
Q  110 atcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaacta-taaataaattaaaaagcaaacactatactttcatagtgatttctttt 208  Q
     |||||| | |||||| ||||||||||||||||||||||| |||| |||| | ||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  26754644 gtcaagactttcatattctggaacttctgcataaacacaa-ggaacaaacaaataaataaattaaaaatcaaacactatactctcatagtgatttgtttt 26754546  T
Q  209 ctgttgctgaaaaagaaatcattgtacatt-ataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagact 307  Q
     |||||  | |||  ||||||||||  ||| ||||||||||||| |||||||||||  |||| | |||||||||||||||||||||||| ||||||||||    
T  26754545 -tgttgacggaaacaaaatcattgtgaatttataaatatatacaattagaaaatgaagttatataacttgccttgcttaaaatactagatgatagagact 26754447  T
Q  308 ttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatct 407  Q
     |||||||||||||| |||||||||| || ||||||||||| ||||||| || |||||||||||| |||| ||||||||||||||||||||||| | | |    
T  26754446 ctgataaacatcctttccatttcaatactctcaaactgcttggaagatatttaagacctttagaaaaatgaccattttcaatgataagtgttttgagttt 26754347  T
Q  408 tgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    ||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||| ||||||||||| |||||| ||||||||    
T  26754346 tgtcatcttcttgaaggcctttcctttctggtctattacggattccatggagtggaaattcatatatatcatttcaattttactagttccct 26754255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 266 - 746
Target Start/End: Original strand, 27716594 - 27717069
Alignment:
Q  266 ttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacc 365  Q
    ||||||||||||||||| ||||||| ||||| || ||| |||| ||||||||||||| |||||||||| |  ||||||||||| ||||||||||||||||    
T  27716594 ttatttcacttgccttgtttaaaatcctagatgacagacacttcgataaacatcctttccatttcaatacactcaaactgcttggaagatacttgagacc 27716693  T
Q  366 tttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaa 465  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| || |||||||| ||||| | |    
T  27716694 tttagaacaatggccattttcaatgataagtgttttcagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggaga 27716793  T
Q  466 ttcatacatatcatttcagttttaccagttccctgttaacnnnnnnnnnnnnnnnnnntgcatcaaccacaataaaaatctgttacagagaaatttacat 565  Q
    |||||| ||||||||||| |||||| |||||||| |||||                  || ||||||||||||||||||  | || ||| | ||| ||||    
T  27716794 ttcatatatatcatttcaattttactagttcccttttaac-----aaagataaaaacatgaatcaaccacaataaaaataagatatagaaatattaacat 27716888  T
Q  566 gtaattaagtggaaaaatatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatca 665  Q
    |||||| |||| ||| | || || || | ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  27716889 gtaattgagtgaaaagaaatgctcgttttagatgatcatatttagttcaaaaagagcaaagttgtattaaaactaaataacaaaatgatcatagatatca 27716988  T
Q  666 atcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctcttta 746  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||| ||| | |||||||| |||||||||||||||||||||    
T  27716989 atcttactcacagtgttttctcttaaaacacgaactatatcatcctgacagcataacctacttctttctccaggctcttta 27717069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 8 - 499
Target Start/End: Complemental strand, 28794705 - 28794213
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    |||||||||||||| ||   ||||||| |||| || |||||||| ||||||  ||| ||||||||||| |||||||| |||||||||||||| | |||||    
T  28794705 tgaattgtaattaatttacgacaatatgcaaacgagaacttttccaaattttgaagacctgagacatcaggtatatgggttaaatattcacacttgtcca 28794606  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaacta-taaataaattaaaaagcaaacactatactttcatagtgatttctt 206  Q
    || |||||| | |||| | ||||||||||||||||||||||| ||||||||| | |||||||||||||||  |||||||||||| |||||||||||||||    
T  28794605 atgtcaagactttcatgttctggaacttctgcataaacacaa-ggaagaaacaaataaataaattaaaaattaaacactatactatcatagtgatttctt 28794507  T
Q  207 ttctgttgctgaaaaagaaatcattgtacatta-taaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagaga 305  Q
     | |||||  |||||  ||||||||||| |||| |||||||||||| | |||||||||  ||||||||||||||||||||||| |||| ||  | |||||    
T  28794506 ctttgttggcgaaaacaaaatcattgtaaattaataaatatatacaataagaaaatgaagttatttcacttgccttgcttaaactacttgataacagaga 28794407  T
Q  306 ctttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaat 405  Q
    || ||||||||||||     |||||||| || ||||||| ||| ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  28794406 ctctgataaacatccacgtaatttcaatactctcaaactacttggaagatagttgagacctttagaaaaatggccattttcaatgataagcgttttcaat 28794307  T
Q  406 cttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||   ||| | ||||||||| ||||||||||| |||||| ||||||||    
T  28794306 cttgtcatcttcttgaaggcctttcctttcttgtctattacggattcctcggaggggaaattcatatatatcatttcaattttactagttccct 28794213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 10 - 499
Target Start/End: Complemental strand, 26625564 - 26625078
Alignment:
Q  10 aattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaat 109  Q
    ||||||||||||||| |||||| | | |||||  ||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||| | |||||||    
T  26625564 aattgtaattaaatttttacaaaaattaaatgtcaacttttgtaaatttgaaaggcctgagatatcgggtatatgtgttaaatgttcacattcgtccaat 26625465  T
Q  110 atcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttttc 209  Q
     | || | | |||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||      
T  26625464 gttaatactttcatattctggaacttctgcataaacacaa-ggaagaaacaataaataaattaaaaatcaaacactatactctcatagtgacttcttt-- 26625368  T
Q  210 tgttgctgaaaaagaaatcattgt-acattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagactt 308  Q
     ||||    |||  |||||||||| |  ||||||||||||||| |||||||||||  | ||||||||||||||| | |||| |||||  ||||||||||     
T  26625367 -gttgacataaacaaaatcattgtgagtttataaatatatacaattagaaaatgaaatcatttcacttgccttgttcaaaaaactagctgatagagactc 26625269  T
Q  309 tgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatctt 408  Q
     ||||||||||||| |||||||||| || ||||||||||| ||||||||||||||||||||||| |  | |||| |||||||||||||||||| | | ||    
T  26625268 cgataaacatcctttccatttcaatactctcaaactgcttggaagatacttgagacctttagaaaaccgaccatcttcaatgataagtgttttgagtttt 26625169  T
Q  409 gtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    ||||||||  |||||||||||||||||| ||||||||| |||||||||||| | ||||||||| ||||||||||| |||||| ||||||||    
T  26625168 gtcatcttcctgaaggcctttcctttctggtctattacggattccatagagggaaaattcatatatatcatttcaattttactagttccct 26625078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 10 - 499
Target Start/End: Complemental strand, 26731541 - 26731055
Alignment:
Q  10 aattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaat 109  Q
    ||||||||||||||| |||||| | | |||||  ||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||| | |||||||    
T  26731541 aattgtaattaaatttttacaaaaattaaatgtcaacttttgtaaatttgaaaggcctgagatatcgggtatatgtgttaaatgttcacattcgtccaat 26731442  T
Q  110 atcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttttc 209  Q
     | || | | |||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||      
T  26731441 gttaatactttcatattctggaacttctgcataaacacaa-ggaagaaacaataaataaattaaaaatcaaacactatactctcatagtgacttcttt-- 26731345  T
Q  210 tgttgctgaaaaagaaatcattgt-acattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagactt 308  Q
     ||||    |||  |||||||||| |  ||||||||||||||| |||||||||||  | ||||||||||||||| | |||| |||||  ||||||||||     
T  26731344 -gttgacataaacaaaatcattgtgagtttataaatatatacaattagaaaatgaaatcatttcacttgccttgttcaaaaaactagctgatagagactc 26731246  T
Q  309 tgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatctt 408  Q
     ||||||||||||| |||||||||| || ||||||||||| ||||||||||||||||||||||| |  | |||| |||||||||||||||||| | | ||    
T  26731245 cgataaacatcctttccatttcaatactctcaaactgcttggaagatacttgagacctttagaaaaccgaccatcttcaatgataagtgttttgagtttt 26731146  T
Q  409 gtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    ||||||||  |||||||||||||||||| ||||||||| |||||||||||| | ||||||||| ||||||||||| |||||| ||||||||    
T  26731145 gtcatcttcctgaaggcctttcctttctggtctattacggattccatagagggaaaattcatatatatcatttcaattttactagttccct 26731055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 505
Target Start/End: Complemental strand, 26804810 - 26804315
Alignment:
Q  10 aattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaat 109  Q
    ||||||||||||||||| |||||||| ||| || |||||||||||||||  ||| ||||||| ||| ||||| || ||||||||||||  || |||||||    
T  26804810 aattgtaattaaattctcacaatatttaaacgagaacttttctaaattttgaagacctgagagatcaggtatgtgggttaaatattcattatcgtccaat 26804711  T
Q  110 atcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaacta-taaataaattaaaaagcaaacactatactttcatagtgatttctttt 208  Q
     |||||| | ||||||  ||||| |||||||||||||||| ||||||||| | |||||||||| |||| ||||||| ||||| ||||||||| || ||||    
T  26804710 gtcaagactttcatattttggaaattctgcataaacacaa-ggaagaaacaaataaataaattcaaaaccaaacacaatactctcatagtgaattgtttt 26804612  T
Q  209 ctgttg-ctgaaaaagaaatcattgtacatt-ataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagac 306  Q
     ||||| | |||| | |||||||  || ||| | ||||||||||  ||| |||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  26804611 -tgttgacagaaaca-aaatcataataaatttacaaatatatacttttataaaatgaagttatttcacttgccttgcttaaaatactagatgatagagac 26804514  T
Q  307 tttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatc 406  Q
    |  ||||||||||||| |||||||||| || ||||||||||| |||||||||||||||||| |||| |||| ||||||||||||||||||||| ||| |     
T  26804513 tccgataaacatcctttccatttcaatactatcaaactgcttggaagatacttgagaccttcagaaaaatgtccattttcaatgataagtgttctcagtt 26804414  T
Q  407 ttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaac 505  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||  |||||||||| |||||| |||||||| |||||    
T  26804413 ttgtcatctttttgaaggcctttcctttctggtctattacggattccatggagtggaaattcatatttatcatttcaattttactagttcccttttaac 26804315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 8 - 499
Target Start/End: Complemental strand, 28788584 - 28788092
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    |||||||||||||| ||   ||||||| |||| || |||||||| ||||||  ||| ||||||||||| |||||||| |||||||||||||| | |||||    
T  28788584 tgaattgtaattaatttacgacaatatgcaaacgagaacttttccaaattttgaagacctgagacatcaggtatatgggttaaatattcacacttgtcca 28788485  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaacta-taaataaattaaaaagcaaacactatactttcatagtgatttctt 206  Q
    || |||||| | |||| | |||||| |||||||||||||||| ||||||||| | |||||||||||||||  |||||||||||| |||||||||||||||    
T  28788484 atgtcaagactttcatgttctggaaattctgcataaacacaa-ggaagaaacaaataaataaattaaaaattaaacactatactatcatagtgatttctt 28788386  T
Q  207 ttctgttgctgaaaaagaaatcattgtacatta-taaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagaga 305  Q
     | |||||  |||||  ||||||||||| |||| |||||||||||| | |||||||||  ||||||||||||||||||||||| |||  ||  | |||||    
T  28788385 ctttgttggcgaaaacaaaatcattgtaaattaataaatatatacaataagaaaatgaagttatttcacttgccttgcttaaactacatgataaaagaga 28788286  T
Q  306 ctttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaat 405  Q
    || ||||||||||||     |||||||| || ||||||| ||| ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  28788285 ctctgataaacatccacgtaatttcaatactctcaaactacttggaagatagttgagacctttagaaaaatggccattttcaatgataagcgttttcaat 28788186  T
Q  406 cttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||   ||| | ||||||||| ||||||||||| |||||| ||||||||    
T  28788185 cttgtcatcttcttgaaggcctttcctttcttgtctattacggattcctcggaggggaaattcatatatatcatttcaattttactagttccct 28788092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 237 - 751
Target Start/End: Complemental strand, 31286669 - 31286163
Alignment:
Q  237 ttataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgct 336  Q
    |||||||| |||||| ||| |||||||  ||| ||||||||||||||||||||||||||| ||||||||||   |||||||||||| |||||||||| ||    
T  31286669 ttataaatgtatacaattataaaatgaagttacttcacttgccttgcttaaaatactagatgatagagactccaataaacatcctttccatttcaatact 31286570  T
Q  337 ttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttct 436  Q
     |||||||| || ||||||||||||| || || ||| ||||||||||||||||||| |||||||| | | |||||||||| ||||||||| |||||||||    
T  31286569 ctcaaactgtttggaagatacttgagtccattggaaaaatggccattttcaatgattagtgttttaagttttgtcatcttcttgaaggccattcctttct 31286470  T
Q  437 tgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaac-nnnnnnnnnnnnnnnnnntgcatcaaccac 535  Q
     ||||||||| |||||||| ||||| ||||||||| ||||||||||| |||||| |||||||| |||||                   |  |||||||||    
T  31286469 ggtctattacggattccatggagtggaaattcatatatatcatttcaattttactagttcccttttaacaaaaaaaaaaaaaagaacataaatcaaccac 31286370  T
Q  536 aataaaaatctgttacagagaaatttacatgtaattaagtggaaaaatatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaa 635  Q
    |||||||||  | ||  |||||||||||||||||||||||  ||| | |||||||||||||||||||||         |||| ||||||||| || ||||    
T  31286369 aataaaaataagatatggagaaatttacatgtaattaagtaaaaataaatactagtatgagatggtcat---------aaaaagagcaaagtcgttttaa 31286279  T
Q  636 aactaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctc 735  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||| |||||| ||| ||||||||||    
T  31286278 aactaaataacaaattgaacatagatatcaatcttactcacagtgttttcatttaaagcatgaactatatcatcttgacaccatagcctacttctttctc 31286179  T
Q  736 caggctctttaggtga 751  Q
    | ||||||||||||||    
T  31286178 ctggctctttaggtga 31286163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 266 - 751
Target Start/End: Complemental strand, 27681049 - 27680569
Alignment:
Q  266 ttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacc 365  Q
    ||||||||||||||||| ||||||||||||| || ||| |||| ||||||||||||| |||||||||| |   |||||||||| ||||||||||||||||    
T  27681049 ttatttcacttgccttgtttaaaatactagatgacagacacttcgataaacatcctttccatttcaatacacgcaaactgcttggaagatacttgagacc 27680950  T
Q  366 tttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaa 465  Q
    |  |||| || ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| || |||||||| ||||| | |    
T  27680949 tccagaaaaaaggccattttcaatgataagtgttttcagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggaga 27680850  T
Q  466 ttcatacatatcatttcagttttaccagttccctgttaacnnnnnnnnnnnnnnnnnntgcatcaaccacaataaaaatctgttacagagaaatttacat 565  Q
    |||||| ||||||||||| |||||| |||||||| |||||                  || ||||||||||||||||||  |  | ||| | ||| ||||    
T  27680849 ttcatatatatcatttcaattttactagttcccttttaac-----aaagataaaaacatgaatcaaccacaataaaaataagacatagatatattaacat 27680755  T
Q  566 gtaattaagtggaaaaatatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatca 665  Q
    |||||| |||| ||| | || ||||||| ||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  27680754 gtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtgcaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatagatatca 27680655  T
Q  666 atcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    ||| ||| |||||||||||||||||||||||||| |||||| ||||||  ||||||||| |||| |||||||||||||||||||||    
T  27680654 atcatactcacagtgttttcttttaaaacatgaattatatcttcttgacgccataacctacttcgttctccaggctctttaggtga 27680569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 266 - 746
Target Start/End: Original strand, 27609215 - 27609690
Alignment:
Q  266 ttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacc 365  Q
    ||||||||||||||||| |||||||| |||| || ||| |||| ||||||||||||| |||||||||| |   |||||||||| |||||||||| |||||    
T  27609215 ttatttcacttgccttgtttaaaatattagatgacagacacttcgataaacatcctttccatttcaatacacgcaaactgcttggaagatacttcagacc 27609314  T
Q  366 tttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaa 465  Q
    |  |||| |||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| || |||||||| ||||| | |    
T  27609315 tccagaaaaatggccattttcaatgataagtgttttcagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggaga 27609414  T
Q  466 ttcatacatatcatttcagttttaccagttccctgttaacnnnnnnnnnnnnnnnnnntgcatcaaccacaataaaaatctgttacagagaaatttacat 565  Q
    |||||| ||||||||||| |||||| |||||||| |||||                  || ||||||||||||||||||  |  | ||| | ||| ||||    
T  27609415 ttcatatatatcatttcaattttactagttcccttttaac-----aaagataaaaacatgaatcaaccacaataaaaataagacatagatatattaacat 27609509  T
Q  566 gtaattaagtggaaaaatatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatca 665  Q
    |||||| |||| ||| | || ||||||| ||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  27609510 gtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtgcaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatagatatca 27609609  T
Q  666 atcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctcttta 746  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||| ||| | |||||||| |||||||||||||||||||||    
T  27609610 atcttactcacagtgttttctcttaaaacacgaactatatcatcctgacagcataacctacttctttctccaggctcttta 27609690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 266 - 747
Target Start/End: Original strand, 27696684 - 27697160
Alignment:
Q  266 ttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacc 365  Q
    ||||||||||||||||| ||||||||||||  || ||| |||| ||||||||||| | |||||||||| |  ||||||| ||| | |||| |||||||||    
T  27696684 ttatttcacttgccttgtttaaaatactagttgacagacacttcgataaacatcccttccatttcaatacactcaaacttcttggtagatgcttgagacc 27696783  T
Q  366 tttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaa 465  Q
    || |||| ||||||||||||||||||||| |||||| | | |||||||||| |||||||||||||||||||||||||| || |||||||| ||||| | |    
T  27696784 ttcagaaaaatggccattttcaatgataactgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacggattccatggagtggaga 27696883  T
Q  466 ttcatacatatcatttcagttttaccagttccctgttaacnnnnnnnnnnnnnnnnnntgcatcaaccacaataaaaatctgttacagagaaatttacat 565  Q
    |||||| ||||||||||| |||||| |||||||| |||||                  || ||||||||||||||||||  | || ||| | ||| ||||    
T  27696884 ttcatatatatcatttcaattttactagttcccttttaac-----aaagataaaaacatgaatcaaccacaataaaaataagatatagaaatattaacat 27696978  T
Q  566 gtaattaagtggaaaaatatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatca 665  Q
    |||||| |||| ||| | || ||||||| ||||| ||||||||||| ||||  ||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  27696979 gtaattgagtgaaaagaaatgctagtatcagatgatcatatttagtgcaaatagagcaaagtcgtattaaaactaaataacaaaatgatcatagatatca 27697078  T
Q  666 atcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttag 747  Q
    ||||||| ||||||||||||| |||||||  ||  ||||||||| ||| | |||||||| ||||||||||||||||||||||    
T  27697079 atcttactcacagtgttttctcttaaaacccgagttatatcatcctgacagcataacctacttctttctccaggctctttag 27697160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 555 - 748
Target Start/End: Complemental strand, 28788059 - 28787863
Alignment:
Q  555 gaaatttacatgtaattaagtg--gaaaa-atatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaatt 651  Q
    ||||||||||||||||||| ||  ||||| | |||||||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||||||||||    
T  28788059 gaaatttacatgtaattaaatgaagaaaacaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcgtatcaaaattaaataacaaatt 28787960  T
Q  652 gaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttagg 748  Q
    ||||||| ||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  28787959 gaacataaatatcaatcatactcacggtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctctttagg 28787863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 555 - 748
Target Start/End: Complemental strand, 28794180 - 28793984
Alignment:
Q  555 gaaatttacatgtaattaagtg--gaaaa-atatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaatt 651  Q
    ||||||||||||||||||| ||  ||||| | |||||||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||||||||||    
T  28794180 gaaatttacatgtaattaaatgaagaaaacaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcgtatcaaaattaaataacaaatt 28794081  T
Q  652 gaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttagg 748  Q
    ||||||| ||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  28794080 gaacataaatatcaatcatactcacggtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctccaggctctttagg 28793984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 27696455 - 27696658
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  27696455 tgaattgtaattaaattcttacaatgttcaaacgataacttttctaaatttgaaaggcttgagacatcgggtatatgtgttaaatattcacaatcgtcca 27696554  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacacta----tactttcatagtgattt 203  Q
    || |||||||| |||||| ||||||||||||||||||||| ||| ||||||| ||||||||| |||||| |||| ||||    |||||||||| ||||||    
T  27696555 atgtcaagattttcatattctggaacttctgcataaacac-aagaaagaaacaataaataaactaaaaatcaaagactaatattactttcatactgattt 27696653  T
Q  204 ctttt 208  Q
    |||||    
T  27696654 ctttt 27696658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 561 - 751
Target Start/End: Original strand, 27603079 - 27603270
Alignment:
Q  561 tacatgtaattaagtggaaaaatatactagtatgagatggtcatatttagtccaaaatgagcaaa-gttgtattaaaactaaataacaaattgaacatag 659  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| || |||| ||  ||||||||||||||||||||||||   ||     
T  27603079 tacatgtaattaagtggaaaaaaataatagtatgagatgatcatatttagtccaaaaagaccaaaagtcatattaaaactaaataacaaattgatattat 27603178  T
Q  660 atatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  27603179 atatcaatcttactcacagtgttttctgttagaacatgaactatatcgtcttgacaccataacctacttctttctccaggctctttaggtga 27603270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 579 - 746
Target Start/End: Original strand, 27704666 - 27704833
Alignment:
Q  579 aaaatatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacag 678  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  27704666 aaaaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcatattaaaactaaataacaaaatgatcatagatatcaatcttactcacag 27704765  T
Q  679 tgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctcttta 746  Q
    ||||||||||||| |||| |||||||||||| ||  | |||||||| |||||||||||||||||||||    
T  27704766 tgttttcttttaagacattaactatatcatcatggcagcataacctacttctttctccaggctcttta 27704833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 27716364 - 27716541
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| | |||   |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||  ||||||    
T  27716364 tgaattgtaattaaattataacatctttcaaacgataacttttctaaatttgaaaggcctgagacatcgggtatatgtgttaaatatttacatcggtcca 27716463  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacacta 186  Q
    ||||||||| | |||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| |||| ||||    
T  27716464 atatcaagactttcatatcctggaacttctgcataaacac-aagaaagaaacaataaataaactaaaaatcaaagacta 27716541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 590 - 751
Target Start/End: Complemental strand, 26648241 - 26648077
Alignment:
Q  590 gtatgagatggtcatatttagt---ccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttct 686  Q
    ||||||||||||||||| || |   ||||| |||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  26648241 gtatgagatggtcatatatatttatccaaattgagcaaagtcgtattaaaactaaataacaaattgatcatagatattaatcttactcacagtgttttct 26648142  T
Q  687 tttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    ||||||||||||||||| ||||||||| |||||||||| |||  |||||||||||||||| ||||    
T  26648141 tttaaaacatgaactatttcatcttgacaccataacctactttgttctccaggctctttacgtga 26648077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 590 - 751
Target Start/End: Complemental strand, 26754209 - 26754045
Alignment:
Q  590 gtatgagatggtcatatttagt---ccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttct 686  Q
    ||||||||||||||||| || |   ||||| |||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  26754209 gtatgagatggtcatatatatttatccaaattgagcaaagtcgtattaaaactaaataacaaattgatcatagatattaatcttactcacagtgttttct 26754110  T
Q  687 tttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    ||||||||||||||||| ||||||||| |||||||||| |||  |||||||||||||||| ||||    
T  26754109 tttaaaacatgaactatttcatcttgacaccataacctactttgttctccaggctctttacgtga 26754045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 527 - 751
Target Start/End: Complemental strand, 26804290 - 26804065
Alignment:
Q  527 atcaaccacaataaaaatctgttacagagaaatttacatgtaattaagtggaaaaata-tactagtatgagatggtcatatttagtccaaaatgagcaaa 625  Q
    ||||| |||||||| |||  | || ||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||| |||||| |||   |||||    
T  26804290 atcaatcacaataacaataagatatagagaaatttatatgtaattaagtgaaaaaaaaatactagtatgagatggtcatatgtagtcctaaaaatgcaaa 26804191  T
Q  626 gttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctg 725  Q
    || ||||  |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||||||||| || |||  |||||||||     
T  26804190 gtcgtatctaaactaaataacaaattgaacataaatatcaatcttactcacaatgttttcttttataacatgaactatatcttcatgacgccataaccta 26804091  T
Q  726 cttctttctccaggctctttaggtga 751  Q
    |||| || | |||| |||||||||||    
T  26804090 cttcgtttttcaggatctttaggtga 26804065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 611 - 751
Target Start/End: Complemental strand, 26625009 - 26624869
Alignment:
Q  611 tccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatct 710  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  26625009 tccaaaaagagcaaagtagtattaaaactaaataataaattgatcatagatatcaatcttactcacactgttttcttttaaaacatgaaatatatcatct 26624910  T
Q  711 tgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    ||| ||||||| || |||| |||||||||||||||||||||    
T  26624909 tgacaccataatctacttcgttctccaggctctttaggtga 26624869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 611 - 751
Target Start/End: Complemental strand, 26730986 - 26730846
Alignment:
Q  611 tccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatct 710  Q
    ||||||| ||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  26730986 tccaaaaagagcaaagtagtattaaaactaaataataaattgatcatagatatcaatcttactcacactgttttcttttaaaacatgaaatatatcatct 26730887  T
Q  711 tgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    ||| ||||||| || |||| |||||||||||||||||||||    
T  26730886 tgacaccataatctacttcgttctccaggctctttaggtga 26730846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 27681280 - 27681077
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| | |||| ||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  27681280 tgaattgtaattaaattatcacaacatgtaaacgataacttttctaaatttgaaaggcctgagacatcgggtatatgtgttaaatattcacaatagtcca 27681181  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaac-tataaataaattaaaaagcaaacac---tatactttcatagtgattt 203  Q
    || |||||| | |||||| ||| |||||||||||| |||| |||||||||||  || ||||||||||||| |||| ||    ||||||||||| ||||||    
T  27681180 atgtcaagactttcatattctgaaacttctgcatacacac-aaggaagaaacaaatcaataaattaaaaatcaaagacaataatactttcatactgattt 27681082  T
Q  204 ctttt 208  Q
    |||||    
T  27681081 ctttt 27681077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 27608984 - 27609187
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| | |||| ||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||    
T  27608984 tgaattgtaattaaattatcacaacatgtaaacgataacttttctaaatttgaaaggcctgagacatcgggtatatgtgttaaatattcacaatagttca 27609083  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaac-tataaataaattaaaaagcaaacac---tatactttcatagtgattt 203  Q
    || |||||| | |||||| ||| |||||||||||| |||| |||||||||||  || ||||||||||||  |||| ||    ||||||||||| ||||||    
T  27609084 atgtcaagactttcatattctgaaacttctgcatacacac-aaggaagaaacaaatcaataaattaaaactcaaagacaataatactttcatactgattt 27609182  T
Q  204 ctttt 208  Q
    |||||    
T  27609183 ctttt 27609187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 8 - 431
Target Start/End: Complemental strand, 26886402 - 26885992
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| ||||  | ||||| ||| |||||||||||||||  ||| |||||||||| ||||| ||| |||||||||||||||| ||| |    
T  26886402 tgaattgtaattaaattattactcttttcaactgagaacttttctaaatttagaagacctgagacattgggtacatgggttaaatattcacaattgtcaa 26886303  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttt 207  Q
    || |||||| | ||||    | |||||||||||||||||||||| |||||||       |||||||||  |||| ||||||||  ||| ||||||||| |    
T  26886302 atgtcaagactttcatgaagtcgaacttctgcataaacacaaag-aagaaac-------aaattaaaattcaaaaactatact--catggtgatttctgt 26886213  T
Q  208 tctgttgctgaaaaagaaatcattgtacatt--ataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagaga 305  Q
    | | |||  |||| | |||||||   | |||  |||| |||||||| |||  |||||   |||||| |||||||||||| ||||||||||| ||||||||    
T  26886212 ttt-ttg--gaaaca-aaatcatac-agatttcataagtatatacaattacgaaatgtaattattttacttgccttgctaaaaatactagatgatagaga 26886118  T
Q  306 ctttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaat 405  Q
    || |||   |||||||| |||||| ||| || |||||||  || ||||||||||  ||||||| ||| |||||||||||||||||||||| ||||| | |    
T  26886117 ctctgaagtacatcctttccatttaaatactctcaaactatttggaagatacttcggacctttggaaaaatggccattttcaatgataagagttttgagt 26886018  T
Q  406 cttgtcatctttttgaaggcctttcc 431  Q
     |||||||||| ||||||| ||||||    
T  26886017 tttgtcatcttcttgaaggactttcc 26885992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 31286870 - 31286722
Alignment:
Q  10 aattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaat 109  Q
    |||||||||||||||  ||||| ||| |||||| ||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  31286870 aattgtaattaaatttctacaaaatttaaatgagaacttctctatatttgaaagacctgagacatcaggtatatgtgttaaatattcacaatcgtccaat 31286771  T
Q  110 atcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaac 159  Q
     |||||| | |||||| ||||||||||||| ||||||| |||||||||||    
T  31286770 gtcaagactttcatattctggaacttctgcgtaaacac-aaggaagaaac 31286722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 408 - 505
Target Start/End: Original strand, 27425846 - 27425943
Alignment:
Q  408 tgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaac 505  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||  ||||||| |||||    
T  27425846 tgtcatcttcttgaaggcctttccattcttgtctattacggattccatagagtgcaaattcatatatatcatttcaattttactggttcccttttaac 27425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 27529175 - 27529278
Alignment:
Q  44 aacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaatatcaagattgtcatatcctggaacttctgcataa 143  Q
    |||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| || ||||||||||| | ||||||| |  |||||||||||||    
T  27529175 aacttttctaaatttggaagccctgagacatccggtatatgggttaaatattcacaattgttcaatatcaagactttcatatcttcaaacttctgcataa 27529274  T
Q  144 acac 147  Q
    ||||    
T  27529275 acac 27529278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 237 - 446
Target Start/End: Complemental strand, 26863710 - 26863501
Alignment:
Q  237 ttataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgct 336  Q
    ||||||||||| ||| || ||||||||  |||| |||||||||||| | |||| || ||| ||||||||||| ||   | |||||| |||||| ||| ||    
T  26863710 ttataaatatacacaattggaaaatgaaattatatcacttgccttgttcaaaaaacaagatgatagagacttggaaggatatcctttccattttaatact 26863611  T
Q  337 ttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttct 436  Q
     ||||||  |||  ||| || ||| ||||||||||| |||||||||||||||||| ||||||||| | | || ||||||| |||||||||||||| |||     
T  26863610 ctcaaacaacttgaaaggtatttgggacctttagaaaaatggccattttcaatgacaagtgttttgagttttttcatcttcttgaaggcctttccattcc 26863511  T
Q  437 tgtctattac 446  Q
     |||||||||    
T  26863510 agtctattac 26863501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 27602587 - 27602723
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||||||||||||| ||| ||||||||||||||||| || |||||||||| ||||  || ||    
T  27602587 tgaattgtaattaaattctcacaaaattgaaacgataacttttctaaatttggaagtcctgagacatcgggtatttgggttaaatattgacaactgttca 27602686  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaa 144  Q
    || |||| | | ||||||  | |||||||||||||||    
T  27602687 atttcaatactttcatatagttgaacttctgcataaa 27602723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 640 - 751
Target Start/End: Complemental strand, 26813267 - 26813156
Alignment:
Q  640 aaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccagg 739  Q
    |||| ||||||||  | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||| ||    
T  26813267 aaatgacaaattgtccctagatatcaatcttactcacaatgttttcttttaaaacatgaactatatcatcttgacaccatagcctacttcgttctcctgg 26813168  T
Q  740 ctctttaggtga 751  Q
     |||| ||||||    
T  26813167 ttcttcaggtga 26813156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 26863904 - 26863761
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| | ||||| |  |||  | |||||||||||||||| |||  | ||||||| |||||||   |||||||||||||||| |||||    
T  26863904 tgaattgtaattaaattatgacaatttataaacaacaacttttctaaatttggaagatcggagacattgggtatacaggttaaatattcacaatagtcca 26863805  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaag 151  Q
    ||||||||| | |||||| || ||||||||||||||||||||||    
T  26863804 atatcaagactttcatattctcgaacttctgcataaacacaaag 26863761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 26637852 - 26637716
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    |||||||||||| |||| ||||| | || ||| || |||||||| |||||||| || |||||||||||||||||||| |||||||| | |||||||| ||    
T  26637852 tgaattgtaattcaatttttacactttttaaacgagaacttttcaaaatttgatagacctgagacatcgggtatatgagttaaatagtgacaatggttca 26637753  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaa 144  Q
    || |||||| | ||||||  | |||||||||||||||    
T  26637752 atgtcaagactttcatatagttgaacttctgcataaa 26637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 257 - 505
Target Start/End: Complemental strand, 26658068 - 26657820
Alignment:
Q  257 aaaatgattttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttcgaagata 356  Q
    |||||||  ||||||||||||||||| || |||||| ||| ||||||||||| ||   |||||||| |||||||||   | ||||||| ||| ||||||     
T  26658068 aaaatgaacttatttcacttgccttgtttgaaatacaagatgatagagacttcgaaggacatcctttccatttcaaaaatctcaaactacttggaagatg 26657969  T
Q  357 cttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacagattccata 456  Q
     ||  ||||||||||| || ||||||||||||||||||| ||||| |   ||||||||||  |||||| |||||| |||  ||||||||  | ||||||     
T  26657968 ttttggacctttagaaaaacggccattttcaatgataagagttttgagatttgtcatcttcctgaagggctttccattccagtctattatggtttccatc 26657869  T
Q  457 gagtgcaaattcatacatatcatttcagttttaccagttccctgttaac 505  Q
    ||| |  |||||| | ||||||||||| | ||||  ||||||| |||||    
T  26657868 gagggacaattcagatatatcatttcaatgttactggttcccttttaac 26657820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 26658275 - 26658139
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    |||||||||||||||||   ||||| |  |||||| ||||||||||||||||| || |||||||||| ||||||||| |||||||||||||||| |||||    
T  26658275 tgaattgtaattaaattagcacaatttcgaaatgagaacttttctaaatttgagagacctgagacattgggtatatgggttaaatattcacaatcgtcca 26658176  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaa 144  Q
    || ||| || | ||||||  | ||||| |||||||||    
T  26658175 atgtcatgaatttcatattattgaactcctgcataaa 26658139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 26743818 - 26743682
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    |||||||||||| |||| ||||| | || ||| || |||||||| |||||||| || |||||||||||||||||||| |||||||| | |||||||| ||    
T  26743818 tgaattgtaattcaatttttacactttttaaacgagaacttttcaaaatttgatagacctgagacatcgggtatatgagttaaatagtgacaatggttca 26743719  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaa 144  Q
    || |||||| | ||||||  | |||||||||||||||    
T  26743718 atgtcaagactttcatatagttgaacttctgcataaa 26743682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 257 - 505
Target Start/End: Complemental strand, 26764039 - 26763791
Alignment:
Q  257 aaaatgattttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttcgaagata 356  Q
    |||||||  ||||||||||||||||| || |||||| ||| ||||||||||| ||   |||||||| |||||||||   | ||||||| ||| ||||||     
T  26764039 aaaatgaacttatttcacttgccttgtttgaaatacaagatgatagagacttcgaaggacatcctttccatttcaaaaatctcaaactacttggaagatg 26763940  T
Q  357 cttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacagattccata 456  Q
     ||  ||||||||||| || ||||||||||||||||||| ||||| |   ||||||||||  |||||| |||||| |||  ||||||||  | ||||||     
T  26763939 ttttggacctttagaaaaacggccattttcaatgataagagttttgagatttgtcatcttcctgaagggctttccattccagtctattatggtttccatc 26763840  T
Q  457 gagtgcaaattcatacatatcatttcagttttaccagttccctgttaac 505  Q
    ||| |  |||||| | ||||||||||| | ||||  ||||||| |||||    
T  26763839 gagggacaattcagatatatcatttcaatgttactggttcccttttaac 26763791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 26764246 - 26764110
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    |||||||||||||||||   ||||| |  |||||| ||||||||||||||||| || |||||||||| ||||||||| |||||||||||||||| |||||    
T  26764246 tgaattgtaattaaattagcacaatttcgaaatgagaacttttctaaatttgagagacctgagacattgggtatatgggttaaatattcacaatcgtcca 26764147  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaa 144  Q
    || ||| || | ||||||  | ||||| |||||||||    
T  26764146 atgtcatgaatttcatattattgaactcctgcataaa 26764110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 609 - 748
Target Start/End: Complemental strand, 26863320 - 26863181
Alignment:
Q  609 agtccaaaatgagcaaagttgtattaaa-actaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatca 707  Q
    |||| |||| |||||||||||| ||||| ||||| ||||| ||||  |||| ||||||||||||| |||||||||||||| |||||| || | |||||||    
T  26863320 agtctaaaacgagcaaagttgtgttaaagactaa-taacagattgttcataaatatcaatcttactcacagtgttttcttctaaaacgtggattatatca 26863222  T
Q  708 tcttgagaccataacctgcttctttctccaggctctttagg 748  Q
    || ||| |||||||||| |||| ||| || |||||||||||    
T  26863221 tcatgacaccataacctacttcgttcacccggctctttagg 26863181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 317 - 429
Target Start/End: Original strand, 27663347 - 27663459
Alignment:
Q  317 atccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctt 416  Q
    |||||| |||||||||| || |||||||  || ||||||||||||||||||||||| ||| ||| |||||||||||||||||||| | | || |||||||    
T  27663347 atcctttccatttcaatactatcaaactttttggaagatacttgagacctttagaaaaatagcccttttcaatgataagtgttttgagttttttcatctt 27663446  T
Q  417 tttgaaggccttt 429  Q
     || |||||||||    
T  27663447 cttaaaggccttt 27663459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 44 - 200
Target Start/End: Original strand, 27425496 - 27425654
Alignment:
Q  44 aacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaatatcaagattgtcatatcctggaacttctgcataa 143  Q
    |||||||||||||||| ||||| ||||||||||||| |||   |||||| || ||||| ||| |||||||| | | |||||| ||  | |||||||||||    
T  27425496 aacttttctaaatttggaagccatgagacatcgggtgtatagattaaatcttgacaattgtcgaatatcaacactttcatattctcaagcttctgcataa 27425595  T
Q  144 acacaaaggaagaaactataaataaat---taaaaagcaaacactatactttcatagtga 200  Q
    ||||| | |||||||| | ||||||||   |||||| ||||||||||||| |||||||||    
T  27425596 acacaca-gaagaaacaaaaaataaataaataaaaaccaaacactatactctcatagtga 27425654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 499
Target Start/End: Complemental strand, 26825932 - 26825670
Alignment:
Q  237 ttataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgct 336  Q
    ||||||||||| ||| || ||||||||  ||||||||||||||||| | ||||||||||| |||||||| |  ||   | | |  |||||||||||| ||    
T  26825932 ttataaatatacacaattggaaaatgaacttatttcacttgccttgttcaaaatactagatgatagagaatccgaaggatacctatcccatttcaatact 26825833  T
Q  337 ttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttct 436  Q
     ||||||| ||| | || ||||   ||||||||||| ||||||| |||| ||| ||||||||||| |   ||||||||||  |||| |||||||| |||     
T  26825832 ctcaaactacttgggaggtactctggacctttagaaaaatggccctttttaataataagtgttttgagatttgtcatcttcatgaaagcctttccattcc 26825733  T
Q  437 tgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
      |||||||||| || | | ||| | ||||||||| ||| ||||||   ||||| ||||||||    
T  26825732 aatctattacagttttcttggaggggaaattcatatatagcatttcgactttactagttccct 26825670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 26850687 - 26850558
Alignment:
Q  324 ccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaag 423  Q
    ||||| |||| || ||||||| ||  ||||||||||| ||||||||||| ||| | ||| ||||| |||||||||||| |   |||||||||| ||||||    
T  26850687 ccattccaatactctcaaactactcggaagatacttgggacctttagaaaaattgtcatcttcaacgataagtgttttgagatttgtcatcttcttgaag 26850588  T
Q  424 gcctttcctttcttgtctattacagattcc 453  Q
    |||||| | ||| |||||||||||| ||||    
T  26850587 gccttttcattcatgtctattacaggttcc 26850558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25513171 - 25513079
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaa 100  Q
    ||||||||||||||| | | |||||||  |||| | |||||||||| ||||| ||| || ||||||||||||||||| |||||||||||||||    
T  25513171 tgaattgtaattaaactatcacaatatcgaaataagaacttttctagatttggaagacccgagacatcgggtatatgggttaaatattcacaa 25513079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 611 - 742
Target Start/End: Original strand, 27426049 - 27426181
Alignment:
Q  611 tccaaaatgagcaaagttgtattaaaa-ctaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatc 709  Q
    ||||||| |||||||||  | |||||| |||||||||||||||  | |  ||||||||||||| |||||||||||||| || ||| | || |||||| |     
T  27426049 tccaaaaagagcaaagtcatgttaaaagctaaataacaaattgttcctgcatatcaatcttactcacagtgttttcttctagaacttcaaatatatcctt 27426148  T
Q  710 ttgagaccataacctgcttctttctccaggctc 742  Q
    || | |||||||||||||||||| |||||||||    
T  27426149 ttcaaaccataacctgcttctttttccaggctc 27426181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 643 - 707
Target Start/End: Original strand, 27529774 - 27529838
Alignment:
Q  643 taacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatca 707  Q
    ||||||||||  | |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  27529774 taacaaattgttcctagatatcaatcttactcacagtgtttttttttaaaacatgaactatatca 27529838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 25485342 - 25485207
Alignment:
Q  9 gaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaa 108  Q
    |||||||||||||| |   |||||||  ||||||  ||||||||| ||||| ||| || ||||||||||||||||| |||||||||||||||   |||||    
T  25485342 gaattgtaattaaactaaaacaatatcgaaatgagcacttttctagatttggaagacccgagacatcgggtatatgggttaaatattcacaaaaatccaa 25485243  T
Q  109 tatcaagattgtcatatcctggaacttctgcataaa 144  Q
    | |||||| | ||||||  | ||||| |||||||||    
T  25485242 tgtcaagactttcatatagttgaactcctgcataaa 25485207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 26952044 - 26951958
Alignment:
Q  37 aaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaatatcaagattgtcat 123  Q
    |||||| || |||| |||||||| ||| |||||||||||||||||||| |||||||| |||| || ||||||| |||||||| ||||    
T  26952044 aaatgagaagttttttaaatttggaagacctgagacatcgggtatatgagttaaatagtcactattgtccaatgtcaagattttcat 26951958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 25076147 - 25076030
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    |||||||||||||| |||  ||| | ||  ||||| | |||||||||||||| ||| |||||||||||||||||||| |||||| | | | |||||| ||    
T  25076147 tgaattgtaattaagttccaacacttttttaatgagatcttttctaaatttggaagacctgagacatcgggtatatgagttaaagagtaaaaatggttca 25076048  T
Q  108 atatcaagattgtcatat 125  Q
    ||||||||| | ||||||    
T  25076047 atatcaagactttcatat 25076030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 350 - 431
Target Start/End: Complemental strand, 26813497 - 26813416
Alignment:
Q  350 gaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcc 431  Q
    |||||| |||| ||||||||||| | || ||||||||||| ||||||||||| | | |||||||||| ||||||||||||||    
T  26813497 gaagatgcttgggacctttagaaaattgaccattttcaataataagtgttttgagttttgtcatcttcttgaaggcctttcc 26813416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 338 - 431
Target Start/End: Complemental strand, 27216470 - 27216377
Alignment:
Q  338 tcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcc 431  Q
    ||||||| ||| ||||||| ||| ||||||||||| ||||||||||||||||||||| |||||| |   || |||||||  |||||||||||||    
T  27216470 tcaaactacttggaagataattgggacctttagaaaaatggccattttcaatgataaatgttttgagatttttcatcttcgtgaaggcctttcc 27216377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 561 - 746
Target Start/End: Original strand, 27663592 - 27663773
Alignment:
Q  561 tacatgtaattaagtggaaaaatatactagtatgagatggtcatattta-gtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatag 659  Q
    |||||||||||||||| ||||| ||  ||||||||||||||||||| || |||||||| ||| |||||  |  |||    |||||||||||||  |||||    
T  27663592 tacatgtaattaagtgtaaaaagatt-tagtatgagatggtcatatataagtccaaaaagaggaaagtcatggtaagctaaaataacaaattgttcatag 27663690  T
Q  660 atatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctcttta 746  Q
    |||||||||||||     ||||||| ||||||||||||| |||||||||| |||  ||| |||||  | |  |||||||||||||||    
T  27663691 atatcaatcttact----gtgttttgttttaaaacatgagctatatcatcatgacgccacaacctagtgcgctctccaggctcttta 27663773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 339 - 505
Target Start/End: Complemental strand, 26961086 - 26960923
Alignment:
Q  339 caaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttg 438  Q
    |||||| ||| ||||||||||| ||||||||||| ||| ||| || ||||||||||||||||| |   |||||||||| ||||| |||||| | ||| ||    
T  26961086 caaactacttggaagatacttgggacctttagaaaaattgcctttctcaatgataagtgttttgagatttgtcatcttcttgaatgccttttcattcatg 26960987  T
Q  439 tctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaac 505  Q
    ||   ||| | || ||| ||| |  |||||| | ||||||||||| |||||| |||||||| |||||    
T  26960986 tc---tacgggtttcattgagggagaattcaaatatatcatttcaattttactagttcccttttaac 26960923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 25547227 - 25547128
Alignment:
Q  45 acttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaatatcaagattgtcatatcctggaacttctgcataaa 144  Q
    ||||||||| ||||  ||| || |||||||| |||||||| ||||||||||||||| | ||||||||||||| | ||||||  | ||||| |||||||||    
T  25547227 acttttctagatttcgaagacccgagacatcaggtatatgggttaaatattcacaaagatccaatatcaagactttcatatagttgaactcctgcataaa 25547128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 26850965 - 26850822
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||| | | |||| | | |||||| | |||||||||||||| ||| || |||||||| | |||||| |||||||||| | ||  |||||    
T  26850965 tgaattgtaattaaactatgacaacaatgaaatgagagcttttctaaatttggaagtccagagacatcagatatatgggttaaatatttagaaccgtcca 26850866  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaag 151  Q
    || ||||| || | || |  | ||||||||||||||||||||||    
T  26850865 atgtcaagtttttaatgttgttgaacttctgcataaacacaaag 26850822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 236 - 431
Target Start/End: Original strand, 27602770 - 27602965
Alignment:
Q  236 attataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgc 335  Q
    |||||||||||| ||| ||  ||||||| |||||||||||||||||| | ||||||| ||| ||||||||||| ||   ||| || | ||||||  |       
T  27602770 attataaatatacacaattgaaaaatgaatttatttcacttgccttgttcaaaatacaagatgatagagacttcgaaggacaaccattccatttgcaaaa 27602869  T
Q  336 tttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcc 431  Q
    | ||||||| ||| ||||||| |   ||||| ||||| | || ||||||||||||||||||||||| |   |||||||||| || | |||||||||    
T  27602870 tctcaaactacttggaagatagtcaggacctctagaaaactgaccattttcaatgataagtgttttgagatttgtcatcttcttcatggcctttcc 27602965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 26826117 - 26825976
Alignment:
Q  10 aattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaat 109  Q
    |||||||||||||||   ||| | || |||||| || ||||||||  ||| ||| | ||||||||||||||| || ||||||| || ||| | |||||||    
T  26826117 aattgtaattaaattacgacattttttaaatgagaatttttctaatattggaagacatgagacatcgggtatgtgggttaaatgttgacacttgtccaat 26826018  T
Q  110 atcaagattgtcatatcctggaacttctgcataaacacaaag 151  Q
       |||| | |||||| || ||||||||||||||||||||||    
T  26826017 gaaaagactttcatattctcgaacttctgcataaacacaaag 26825976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 689 - 746
Target Start/End: Complemental strand, 26885751 - 26885694
Alignment:
Q  689 taaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctcttta 746  Q
    ||||||||||||||||||||| ||| |||||||||| || | ||||||||||||||||    
T  26885751 taaaacatgaactatatcatcgtgacaccataacctactacgttctccaggctcttta 26885694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 505
Target Start/End: Original strand, 25491522 - 25491634
Alignment:
Q  393 aagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttacca 492  Q
    ||||||||| | | ||||| |||| |||||||||| ||| |||  ||||||| |  ||||||| ||| | ||||||||| ||||||||||| |||||| |    
T  25491522 aagtgttttgagttttgtcgtcttcttgaaggcctctccattccagtctatttcgaattccatggaggggaaattcatatatatcatttcaattttacta 25491621  T
Q  493 gttccctgttaac 505  Q
    ||||||| |||||    
T  25491622 gttcccttttaac 25491634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 26145112 - 26145013
Alignment:
Q  45 acttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaatatcaagattgtcatatcctggaacttctgcataaa 144  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||||||||  | ||| || |||| |||||| | ||||||  | ||||| |||||||||    
T  26145112 acttttctagatttggaagacctgagacatcgggtatatgggttaaatatcgagaatagttcaatgtcaagactttcatatagttgaactcctgcataaa 26145013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 588 - 739
Target Start/End: Complemental strand, 26951510 - 26951362
Alignment:
Q  588 tagtatgagatggtcatattta-gtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttct 686  Q
    ||||||||||| ||||||| || ||||||||| ||||||||  |  |||   ||||||| ||||||  || |||||||||||||||     |||||||||    
T  26951510 tagtatgagatagtcatatataagtccaaaataagcaaagtcatggtaagtttaaataataaattgttcacagatatcaatcttact----gtgttttct 26951415  T
Q  687 tttaaaacatgaactatatcatcttgagaccataacctgcttctttctccagg 739  Q
    | |||||||||||| ||||||||  ||||||| ||||| || | |||||||||    
T  26951414 tgtaaaacatgaacaatatcatcacgagaccacaacctactgcgttctccagg 26951362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 26058166 - 26058116
Alignment:
Q  45 acttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatatt 95  Q
    ||||||||| ||||| ||| |||||||||||||||||||| ||||||||||    
T  26058166 acttttctagatttggaagacctgagacatcgggtatatgggttaaatatt 26058116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 26078136 - 26078086
Alignment:
Q  45 acttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatatt 95  Q
    ||||||||| ||||| ||| |||||||||||||||||||| ||||||||||    
T  26078136 acttttctagatttggaagacctgagacatcgggtatatgggttaaatatt 26078086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 739
Target Start/End: Original strand, 25491786 - 25491870
Alignment:
Q  655 catagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccagg 739  Q
    ||||||||||||||||||  || ||||||||| ||||||| ||||| ||||||||  || |||| ||||| || | |||||||||    
T  25491786 catagatatcaatcttacttaccgtgttttctcttaaaacttgaaccatatcatcgggacaccacaacctactacgttctccagg 25491870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 25582003 - 25581919
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaat 92  Q
    ||||||||||||||| |   |||| ||| ||||||  ||||||||| ||||| ||| || ||||||||||||||||| |||||||    
T  25582003 tgaattgtaattaaactaaaacaaaattgaaatgagcacttttctagatttggaagacccgagacatcgggtatatgggttaaat 25581919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 746
Target Start/End: Complemental strand, 26960802 - 26960737
Alignment:
Q  681 ttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctcttta 746  Q
    ||||||| |||||||||||||||||||||  || |||| ||||| || | || |||||||||||||    
T  26960802 ttttcttgtaaaacatgaactatatcatcacgacaccacaacctactgcgttttccaggctcttta 26960737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 431
Target Start/End: Original strand, 27529455 - 27529548
Alignment:
Q  338 tcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcc 431  Q
    ||||||| ||| ||||||||| ||||| |||||||  ||||||||||||| | |||| |||||| |   |||||||||| | |||||| |||||    
T  27529455 tcaaactacttggaagatactcgagacttttagaatgatggccattttcagtaataaatgttttgaggtttgtcatcttctcgaaggcatttcc 27529548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 8 - 751
Target Start/End: Original strand, 266195 - 266924
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||||||||||| || |||||| | ||||| |||||| | ||| ||||||||||| | |||||| |||||||||||||||||||| |    
T  266195 tgaattgtaattaaattcttacaatctttaaatgagagcttttttaaattaggaagtcctgagacatcagatatatgggttaaatattcacaatggtcta 266294  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacactatactttcatagtgatttcttt 207  Q
    |||||||||   ||||||||||||||||||||||| |||||| |  |||||| ||||||||| |||||| |||| |||||||| |||||||||||| |||    
T  266295 atatcaagacattcatatcctggaacttctgcatacacacaagg--agaaacaataaataaactaaaaatcaaagactatactctcatagtgattttttt 266392  T
Q  208 tctgttgctgaaaaagaaatcattgt-acattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagac 306  Q
    |  ||||  | |||  |||||||||| |  || ||||||||||||  ||||||||||  | ||||||||||||||| |  ||| || ||| ||||  |||    
T  266393 t--gttgacgtaaacaaaatcattgtgagtttctaaatatatacaaatagaaaatgaaatcatttcacttgccttgttcgaaaaacaagatgataatgac 266490  T
Q  307 tttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatc 406  Q
    |  ||   | |||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||| ||||||||| |       
T  266491 tccgaagtaaatcctttccatttcaatactttcaaactgcttcgaaggtacttcagacctttagaaaaatgcccattttcaatgacaagtgttttgagat 266590  T
Q  407 ttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaacn 506  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||| |||||||||||  ||||| |||||||| |||||     
T  266591 ttgtcatcttcttgaaggcctttcctttctggtctattacaggttccatcgagtggaaattcatatatatcatttcaactttactagttcccttttaac- 266689  T
Q  507 nnnnnnnnnnnnnnnnntgcatcaaccacaataaaaatctgttacagagaaatttacatgtaattaagtggaaaaatatactagtatgagatggtcatat 606  Q
                     || |||||| |||||||||||  | || ||| ||| |||||||||| ||     | ||||  |||||||||||||||||||||    
T  266690 ---aaaacaaaaaaacatgaatcaacaacaataaaaataagatatagataaacttacatgtaaata-----ataaat--actagtatgagatggtcatat 266779  T
Q  607 ttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatc 706  Q
    || |||||||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||  ||||||||||||||||||||    
T  266780 tttgtccaaaaagagcaaagtcgtattaaaactaaataacaaattgatcattgatatcaatcttactcacagtgtttttatttaaaacatgaactatatc 266879  T
Q  707 atcttgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||    
T  266880 atcttgacaccataacctacttcgttctccaggctctttaggtga 266924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 28125557 - 28125700
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| | ||||||| ||||||| |||||||||||||||| |||   |||||||||||||||||| |||||||||||||||  || ||    
T  28125557 tgaattgtaattaaattatcacaatatgcaaatgagaacttttctaaatttggaagatgtgagacatcgggtatatgggttaaatattcacaaaagttca 28125656  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaag 151  Q
    |  |||||| | |||||| || ||||||||||||||||||||||    
T  28125657 aagtcaagactttcatattctcgaacttctgcataaacacaaag 28125700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 28130595 - 28130738
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| | ||||| ||||||||| |||||||||||||||| |||   |||||||| ||||||||  |||||||||| |||   || ||    
T  28130595 tgaattgtaattaaattatcacaattttcaaatgagaacttttctaaatttggaagatgtgagacattgggtatattggttaaatatttacagaagttca 28130694  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaag 151  Q
    || |||||| | || ||| || ||||||||||||||||||||||    
T  28130695 atgtcaagactttcgtattctcgaacttctgcataaacacaaag 28130738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 26138230 - 26138096
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||||  ||| |||||||||||||||| ||  |||||||||| ||||| ||  |    
T  26138230 tgaattgtaattaaattgttacaattttcaaatgagaacttttctaaattttgaagacctgagacatcgggtagatcagttaaatattgacaatcgttaa 26138131  T
Q  108 atatcaagattgtcatatcctggaacttctgcata 142  Q
    |  |||| | | |||||| || |||||||||||||    
T  26138130 agctcaaaactttcatatactcgaacttctgcata 26138096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 239 - 505
Target Start/End: Original strand, 28125749 - 28126015
Alignment:
Q  239 ataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgcttt 338  Q
    ||||||||| ||| || ||||||||  ||||||||||||||||| | |||| |||||| ||||||||||| |    | ||||||||||| ||||| || |    
T  28125749 ataaatatacacaatttgaaaatgaacttatttcacttgccttgttcaaaaaactagatgatagagacttcgcattatatccttcccatatcaatactct 28125848  T
Q  339 caaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttg 438  Q
    |||| | ||| ||||||||||| ||| ||| ||  | || |||||||  || ||||||||||| |   ||| |||||| |||||||| ||||  |||  |    
T  28125849 caaagtacttggaagatacttgggacttttggagaattgaccattttttataataagtgttttaagatttgacatcttcttgaaggcttttcgattccag 28125948  T
Q  439 tctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaac 505  Q
    |||||||  | |||||||||| |  |||||  | ||||||||||| | ||||||||||||| |||||    
T  28125949 tctattatgggttccatagagggataattccaatatatcatttcaatgttaccagttcccttttaac 28126015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 552 - 751
Target Start/End: Original strand, 28126064 - 28126259
Alignment:
Q  552 agagaaatttacatgtaattaagtggaaaaatatactagtatgagatggtcatat-ttagtccaaaatgagcaaagttgt-attaaaact-aaataacaa 648  Q
    |||||||| ||  ||||||||||||||||||   ||||| ||||||||||||||| | ||||||||| |||  ||||  | |||||| || |||||||||    
T  28126064 agagaaatatatgtgtaattaagtggaaaaa---actagcatgagatggtcatatataagtccaaaaagagtgaagtcatgattaaagctaaaataacaa 28126160  T
Q  649 attgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttagg 748  Q
    ||||  ||||||||||||||||    || |||||||  | || |||||||||||||||||  ||| ||||||||||| | | |||||||||||||||| |    
T  28126161 attgttcatagatatcaatctt----accgtgtttttctgtagaacatgaactatatcattgtgacaccataacctgttgcgttctccaggctctttacg 28126256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 681 - 751
Target Start/End: Complemental strand, 26137559 - 26137489
Alignment:
Q  681 ttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttaggtga 751  Q
    |||||||||||||||||||||||||| || ||| |||| ||||| || | || |||||| ||||| |||||    
T  26137559 ttttcttttaaaacatgaactatatcttcatgaaaccacaacctactgcgttttccaggttctttgggtga 26137489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 411 - 505
Target Start/End: Original strand, 28131740 - 28131834
Alignment:
Q  411 catctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaac 505  Q
    |||||| ||||||||| |||  |||  ||||||||| | |||||| |||||  |||| | ||||||||||||| |||| |||||||||| |||||    
T  28131740 catcttcttgaaggccattcgattccagtctattacgggttccattgagtgacaattaagacatatcatttcaatttttccagttcccttttaac 28131834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 223; Significance: 1e-122; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 8 - 499
Target Start/End: Complemental strand, 9831 - 9338
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||  ||| ||||||||||| |||||||| ||||||||||||||   |||||    
T  9831 tgaattgtaattaaattctcacaatattcaaaggagaacttttctaaattttgaagacctgagacatcaggtatatgggttaaatattcacacctgtcca 9732  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaacta-taaataaattaaaaagcaaacactatactttcatagtgatttctt 206  Q
    || |||||||| |||| | ||||||||||||||||||||||| ||||||||| | |||||||||||||||  |||||||||||| |||||| ||||||||    
T  9731 atgtcaagattttcatgttctggaacttctgcataaacacaa-ggaagaaacaaataaataaattaaaaattaaacactatactatcatagcgatttctt 9633  T
Q  207 ttctgttgctgaaaa-agaaatcattgtacatta-taaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagag 304  Q
     | |||||  ||||| | ||||||||||| |||| |||||||||||| | |||||||||  ||||||||||| ||||||||||| |||  ||  ||||||    
T  9632 ctttgttggcgaaaacaaaaatcattgtaaattaataaatatatacaataagaaaatgaagttatttcacttaccttgcttaaactacatgataatagag 9533  T
Q  305 actttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaa 404  Q
    ||| ||||||||||||     |||||||| || ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||     
T  9532 actctgataaacatccacgtaatttcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggacattttcaatgataagcgttttcag 9433  T
Q  405 tcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||  |||| | ||||||||| ||||||||||| |||| | ||||||||    
T  9432 tcttgtcatcttcttgaaggcctttcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaatttttctagttccct 9338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 555 - 748
Target Start/End: Complemental strand, 9304 - 9109
Alignment:
Q  555 gaaatttacatgtaattaagtggaaaaata--tactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattg 652  Q
    |||||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||||||    
T  9304 gaaatttacatgtaattaagtggaaaaaaaaatactaatatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattg 9205  T
Q  653 aacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttagg 748  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  9204 aacatagatatcaatcttactcacagtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctcctggctctttagg 9109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 223; Significance: 1e-122; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 8 - 499
Target Start/End: Original strand, 2555 - 3048
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||  ||| ||||||||||| |||||||| ||||||||||||||   |||||    
T  2555 tgaattgtaattaaattctcacaatattcaaaggagaacttttctaaattttgaagacctgagacatcaggtatatgggttaaatattcacacctgtcca 2654  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaacta-taaataaattaaaaagcaaacactatactttcatagtgatttctt 206  Q
    || |||||||| |||| | ||||||||||||||||||||||| ||||||||| | ||||| |||||||||  |||||||||||| |||||| ||||||||    
T  2655 atgtcaagattttcatgttctggaacttctgcataaacacaa-ggaagaaacaaataaattaattaaaaattaaacactatactatcatagcgatttctt 2753  T
Q  207 ttctgttgctgaaaa-agaaatcattgtacatta-taaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagag 304  Q
     | |||||  ||||| | ||||||||||| |||| |||||||||||| | |||||||||  ||||||||||| ||||||||||| |||  ||  ||||||    
T  2754 ctttgttggcgaaaacaaaaatcattgtaaattaataaatatatacaataagaaaatgaagttatttcacttaccttgcttaaactacatgataatagag 2853  T
Q  305 actttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaa 404  Q
    ||| ||||||||||||     |||||||| || ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||     
T  2854 actctgataaacatccacgtaatttcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggacattttcaatgataagcgttttcag 2953  T
Q  405 tcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||  |||| | ||||||||| ||||||||||| |||||| ||||||||    
T  2954 tcttgtcatcttcttgaaggcctttcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaattttactagttccct 3048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 8 - 499
Target Start/End: Original strand, 11518 - 12011
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    |||||||||||||| ||   ||||||| |||| || |||||||| ||||||  ||| ||||||||||| |||||||| |||||||||||||| | |||||    
T  11518 tgaattgtaattaatttacgacaatatgcaaacgagaacttttccaaattttgaagacctgagacatcaggtatatgggttaaatattcacacttgtcca 11617  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaacta-taaataaattaaaaagcaaacactatactttcatagtgatttctt 206  Q
    || |||||| | |||| | |||||| |||||||||||||||| ||||||||| | |||||||||||||||  |||||||||||| |||||||||||||||    
T  11618 atgtcaagactttcatgttctggaaattctgcataaacacaa-ggaagaaacaaataaataaattaaaaattaaacactatactatcatagtgatttctt 11716  T
Q  207 ttctgttgctgaaaa-agaaatcattgtacatta-taaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagag 304  Q
     | ||||| |||||| | ||||||||||| |||| |||||||||||| | |||||||||  ||||||||||||||||||||||| |||  ||  ||||||    
T  11717 ctttgttggtgaaaacaaaaatcattgtaaattaataaatatatacaataagaaaatgaagttatttcacttgccttgcttaaactacatgataatagag 11816  T
Q  305 actttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaa 404  Q
    ||| |||||||||||| |   |||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||     
T  11817 actctgataaacatccatgtaatttcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggccattttcaatgataagcgttttcag 11916  T
Q  405 tcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||  |||| | ||||||||| ||||||||||| |||||| ||||||||    
T  11917 tcttgtcatcttcttgaaggcctttcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaattttactagttccct 12011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 555 - 745
Target Start/End: Original strand, 3081 - 3272
Alignment:
Q  555 gaaatttacatgtaattaagtggaaaaata-tactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattga 653  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||||||||||||    
T  3081 gaaatttacatgtaattaagtggaaaaaaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattga 3180  T
Q  654 acatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctcttt 745  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||||| || ||||||||||||||||||||    
T  3181 acatagatatcaatcttactcacagtgttttcttttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctcttt 3272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 555 - 745
Target Start/End: Original strand, 12044 - 12235
Alignment:
Q  555 gaaatttacatgtaattaagtggaaaaata-tactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattga 653  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||||||||||||    
T  12044 gaaatttacatgtaattaagtggaaaaaaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattga 12143  T
Q  654 acatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctcttt 745  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||||| || ||||||||||||||||||||    
T  12144 acatagatatcaatcttactcacagtgttttcttttaaaacattaactatatcatcttcacaccataatctacttctttctccaggctcttt 12235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 211; Significance: 1e-115; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 8 - 499
Target Start/End: Complemental strand, 1112 - 619
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||  ||| ||||||||||| |||||||| ||||||||||||||   |||||    
T  1112 tgaattgtaattaaattctcacaatattcaaaggagaacttttctaaattttgaagacctgagacatcaggtatatgggttaaatattcacacctgtcca 1013  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaacta-taaataaattaaaaagcaaacactatactttcatagtgatttctt 206  Q
    || |||||||| |||| | ||||||||||||||||||||||| ||||||||| | ||||| |||||||||  |||||||||||| |||||| ||||||||    
T  1012 atgtcaagattttcatgttctggaacttctgcataaacacaa-ggaagaaacaaataaattaattaaaaattaaacactatactatcatagcgatttctt 914  T
Q  207 ttctgttgctgaaaa-agaaatcattgtacatta-taaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagag 304  Q
     | |||||  ||||| | ||||||||||| |||| |||||||||||| | |||||||||  |||||||| || ||||||||||| |||  ||   |||||    
T  913 ctttgttggcgaaaacaaaaatcattgtaaattaataaatatatacaataagaaaatgaagttatttcattttccttgcttaaactacatgatattagag 814  T
Q  305 actttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaa 404  Q
    ||| ||||||||||||     |||||||| || ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||     
T  813 actctgataaacatccacgtaatttcaatactctcaaactgcttggaagatacttgagacctttagaaaaatggtcattttcaatgataagcgttttcag 714  T
Q  405 tcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||  |||| | ||||||||| ||||||||||| |||| | ||||||||    
T  713 tcttgtcatcttcttgaaggcctttcctttcttgtctattacgaattcctcagaggggaaattcatatatatcatttcaatttttctagttccct 619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870; HSP #2
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 555 - 748
Target Start/End: Complemental strand, 585 - 391
Alignment:
Q  555 gaaatttacatgtaattaagtggaaaaata-tactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattga 653  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||||||||||||    
T  585 gaaatttacatgtaattaagtggaaaaaaaatactagtatgagatggtcatatttagtccaaaaagagcaaagtcatatcaaaactaaataacaaattga 486  T
Q  654 acatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctctttagg 748  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  485 acatagatatcaatcttactcacagtgttttcttttaaaacattaactatatcatcttgacaccataacctacttctttctcctggctctttagg 391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 3e-81; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 266 - 746
Target Start/End: Original strand, 29271933 - 29272408
Alignment:
Q  266 ttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacc 365  Q
    ||||||||||||||||| ||||||||||||| || ||| |||| ||||||||||||| |||||||||| |  ||||||| ||| | | || |||||||||    
T  29271933 ttatttcacttgccttgtttaaaatactagatgacagacacttcgataaacatcctttccatttcaatacactcaaacttcttggtaaatgcttgagacc 29272032  T
Q  366 tttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaa 465  Q
    |  |||| ||||||||||||| | ||||| |||||| | | |||||||||| |||||||||||||||||||||||||| |||||||| || || || | |    
T  29272033 tccagaaaaatggccattttcgaagataactgttttgagttttgtcatcttcttgaaggcctttcctttcttgtctatcacagattctatggaatggaga 29272132  T
Q  466 ttcatacatatcatttcagttttaccagttccctgttaacnnnnnnnnnnnnnnnnnntgcatcaaccacaataaaaatctgttacagagaaatttacat 565  Q
    ||| || ||||||||||| |||||| |||||||| |||||                  || ||||||||||||||||||  | |  | | | ||| ||||    
T  29272133 ttcgtatatatcatttcaattttactagttcccttttaac-----aaagaaaaaaatatgaatcaaccacaataaaaataagatgtacaaatattaacat 29272227  T
Q  566 gtaattaagtggaaaaatatactagtatgagatggtcatatttagtccaaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatca 665  Q
    | |||| |||| ||| | || ||||||| ||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  29272228 gcaattgagtgaaaataaatgctagtatcagatgataatatttagtccaaaaagagcaaagtcgtattaaaactaaataacaaaatgatcatagatatca 29272327  T
Q  666 atcttacgcacagtgttttcttttaaaacatgaactatatcatcttgagaccataacctgcttctttctccaggctcttta 746  Q
    ||||||| ||||||||||||| |||||||| |||||| |||||| ||  | |||||||| |||||||||||||||||||||    
T  29272328 atcttactcacagtgttttctcttaaaacacgaactagatcatcctggcagcataacctacttctttctccaggctcttta 29272408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 29271703 - 29271905
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||| ||||||| | ||||| |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||  ||||||    
T  29271703 tgaattgtagttaaattatcacaattttcaaacgataacttttctaaatttgaaaggcctgagacatcggggatatgtgttaagtattcacatcggtcca 29271802  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacact---atactttcatagtgatttc 204  Q
    ||||||||| | |||||||||| ||||||||||||||||| ||| ||||||| ||||||||| |||||| |||| |||   |||||||||||||||||||    
T  29271803 atatcaagactttcatatcctgaaacttctgcataaacac-aagaaagaaacaataaataaactaaaaatcaaagactataatactttcatagtgatttc 29271901  T
Q  205 tttt 208  Q
    ||||    
T  29271902 tttt 29271905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 10 - 329
Target Start/End: Complemental strand, 22023570 - 22023251
Alignment:
Q  10 aattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaat 109  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| ||||||||||   ||||||  || ||||||||||||||||   |     
T  22023570 aattgtaattaaattcttacaattttcaaacgataacttttctaaatttggaagacctgagacattacgtatataggtaaaatattcacaatggtatgac 22023471  T
Q  110 atcaagattgtcatatcctggaacttctgcataaacacaaagga--agaaac-tataaataaattaaaaagcaaacactatactttcatagtgatttctt 206  Q
     |||||| | |||||| ||||||||||||||||||||||| | |  ||||||  ||| || ||||||||| |||||| | ||||||||| |  |||| ||    
T  22023470 gtcaagactttcatattctggaacttctgcataaacacaaggaattagaaacaaatacatgaattaaaaatcaaacattttactttcat-ggaatttttt 22023372  T
Q  207 ttctgttgctgaaaaagaaatcattgt-acattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagaga 305  Q
    ||    ||  |||||  |||||||||| |  ||||||||||||||| ||||||| |||  ||||||||||||||||||| ||||||||||| ||||||||    
T  22023371 tt---atgacgaaaacaaaatcattgtgaatttataaatatatacaattagaaagtgaagttatttcacttgccttgctcaaaatactagatgatagaga 22023275  T
Q  306 ctttgataaacatccttcccattt 329  Q
    ||  ||||||||||||| ||||||    
T  22023274 ctccgataaacatcctttccattt 22023251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 35985686 - 35985634
Alignment:
Q  6 catgaattgtaattaaattcttacaatattcaaatgataacttttctaaattt 58  Q
    |||||||||||||||| |||| ||||||||||||||| ||  |||||||||||    
T  35985686 catgaattgtaattaatttctcacaatattcaaatgagaatgtttctaaattt 35985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 1e-71; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 8 - 446
Target Start/End: Original strand, 18677460 - 18677898
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||| ||||||||| | |||| ||  ||| || || ||||||||||||| ||| |||||||||| ||||||||| |||||||||  ||||| |||||    
T  18677460 tgaattgcaattaaattatcacaaaatcgaaacgagaatttttctaaatttggaagacctgagacattgggtatatgggttaaatatagacaatagtcca 18677559  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactat-aaataaattaaaaagcaaacactatactttcatagtgat-ttct 205  Q
    || |||||| | |||||||||  ||| ||||||||||||||||| ||||||| |  |||||||||||||| ||||||||||||| |||||||||| || |    
T  18677560 atgtcaagactttcatatcctcaaacctctgcataaacacaaag-aagaaacaaacaaataaattaaaaatcaaacactatactctcatagtgatattat 18677658  T
Q  206 tttctgttgctgaaaaagaaatcattgtacatt-ataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagag 304  Q
    ||||| |  | |||| | ||||||||||  ||| ||||||||||||| |||||||||||  ||||||||||||||||||   ||||| |||| |||||||    
T  18677659 tttct-tgacagaaaca-aaatcattgtgaatttataaatatatacaattagaaaatgaaattatttcacttgccttgcaacaaataatagatgatagag 18677756  T
Q  305 actttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaa 404  Q
    ||| |||  ||||||| | |||||||||| || ||||||| ||| ||||||||||||||||||||||| ||  | |||||||||| ||||||||||| |     
T  18677757 actctgaacaacatccattccatttcaatactctcaaactccttggaagatacttgagacctttagaaaaagagacattttcaataataagtgttttgag 18677856  T
Q  405 tcttgtcatctttttgaaggcctttcctttcttgtctattac 446  Q
      |||||||||| ||||||| |||||| |||  |||||||||    
T  18677857 atttgtcatcttcttgaaggtctttccattccagtctattac 18677898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 8 - 446
Target Start/End: Original strand, 18729396 - 18729834
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||| ||||||||| | |||||||| ||| || || ||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||| | |||||    
T  18729396 tgaattgcaattaaattgtcacaatattgaaacgagaatttttctaaatttggaagacctgagacattgggtatatgggttaaatattgacacttgtcca 18729495  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactat-aaataaattaaaaagcaaacactatactttcatagtgat-ttct 205  Q
    || |||||| | |||||||||  ||| |||||||||||| |||| ||||||| |  ||||||||||||||  |||||||||||| |||||||||| || |    
T  18729496 atgtcaagactttcatatcctcaaacctctgcataaacaaaaag-aagaaacaaacaaataaattaaaaataaaacactatactctcatagtgatattat 18729594  T
Q  206 tttctgttgctgaaaaagaaatcattgtacatt-ataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagag 304  Q
    ||||| |  | |||| | ||||||||||  ||| ||||||||||||| |||||||||||  ||||||||||||||||||  ||||||  ||| |||||||    
T  18729595 tttct-tgacagaaaca-aaatcattgtgaatttataaatatatacaattagaaaatgaaattatttcacttgccttgcagaaaataaaagatgatagag 18729692  T
Q  305 actttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaa 404  Q
    ||| |||  ||||||| | | |||||||| || ||||||||||| ||||||||||| || |||||||| ||| | |||||| ||| ||||||||||| |     
T  18729693 actctgaagaacatccattcaatttcaatactctcaaactgcttggaagatacttgggatctttagaaaaatagacatttttaataataagtgttttgag 18729792  T
Q  405 tcttgtcatctttttgaaggcctttcctttcttgtctattac 446  Q
      |||||||||| ||||| |||||||| |||  |||||||||    
T  18729793 atttgtcatcttcttgaaagcctttccattccagtctattac 18729834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 8 - 446
Target Start/End: Original strand, 18653378 - 18653816
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||| |||||||||  ||||| ||| ||| || || | ||||||||| | ||| ||| |||||| ||||||||| |||||||||| ||||| |||||    
T  18653378 tgaattgcaattaaattaatacaaaattgaaacgagaattattctaaattaggaagacctaagacattgggtatatgggttaaatattgacaattgtcca 18653477  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactat-aaataaattaaaaagcaaacactatactttcatagtgat-ttct 205  Q
    || |||||| | |||||||||  ||| ||||||||||||||||| ||||||| |  |||||||||||||| ||||||||||||| |||||||||| || |    
T  18653478 atgtcaagactttcatatcctcaaacctctgcataaacacaaag-aagaaacaaacaaataaattaaaaatcaaacactatactctcatagtgatattat 18653576  T
Q  206 tttctgttgctgaaaaagaaatcattgtacatt-ataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagag 304  Q
    ||||| |  | |||| | ||||||||||  ||| ||||||||||||| |||||||||||  ||||||||||||||||||   ||||| |||| |||||||    
T  18653577 tttct-tgacagaaaca-aaatcattgtgaatttataaatatatacaattagaaaatgaaattatttcacttgccttgcagcaaataatagatgatagag 18653674  T
Q  305 actttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaa 404  Q
    ||| |||  ||||||| | | |||||||| || ||||||||||| ||||||||||| || |||||||| ||  | |||||| ||| ||||||||||| |     
T  18653675 actctgaagaacatccattcaatttcaatactctcaaactgcttggaagatacttgggatctttagaaaaagagacatttttaataataagtgttttgag 18653774  T
Q  405 tcttgtcatctttttgaaggcctttcctttcttgtctattac 446  Q
      |||||||||| |||||||||||||| |||  |||||||||    
T  18653775 atttgtcatcttcttgaaggcctttccattccagtctattac 18653816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 8 - 446
Target Start/End: Original strand, 18697303 - 18697740
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||| ||||||||| ||||| | |||||| || || | ||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||| |||||    
T  18697303 tgaattgcaattaaattgttacatttttcaaacgagaattcttctaaatttggaagacctgagacattgggtatatgggttaaatattgacaattgtcca 18697402  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactat-aaataaattaaaaagcaaacactatactttcatagtgatttctt 206  Q
    || |||||| | |||||||||  ||| ||||||||||||||||| ||||||| |  ||||| |||||||| |||| |||||||| |||| ||||| | ||    
T  18697403 atgtcaagactttcatatcctcaaacctctgcataaacacaaag-aagaaacaaacaaatatattaaaaatcaaatactatactctcatggtgatatttt 18697501  T
Q  207 ttctgttgctgaaaaagaaatcattgtacattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagac 306  Q
    || | ||| || |||   |||| |   |  ||||||||||||||| |||||||||||  |||||||||||||||||||  |||||| ||| |||||||||    
T  18697502 tt-tcttgatggaaacagaatcgtgtgaatttataaatatatacaattagaaaatgaaattatttcacttgccttgctgcaaatacaagatgatagagac 18697600  T
Q  307 tttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatc 406  Q
    | ||   ||||||| | | |||||||| || ||||||||||| ||||||||||| || |||||||| ||  | |||||||||| ||||||||||| |       
T  18697601 tctgtagaacatccattcaatttcaatactctcaaactgcttggaagatacttgggatctttagaaaaagagacattttcaataataagtgttttgagat 18697700  T
Q  407 ttgtcatctttttgaaggcctttcctttcttgtctattac 446  Q
    |||||||||| |||||||||||||| |||  |||||||||    
T  18697701 ttgtcatcttcttgaaggcctttccattccagtctattac 18697740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 47 - 446
Target Start/End: Original strand, 18722013 - 18722412
Alignment:
Q  47 ttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaatatcaagattgtcatatcctggaacttctgcataaaca 146  Q
    ||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||| | ||||||| |||||| | |||||| ||  ||| ||||||||||||    
T  18722013 ttttctaaatttggaagacctgagacattgggtatatgggttaaatattgacacttgtccaatgtcaagactttcatatgctcaaacctctgcataaaca 18722112  T
Q  147 caaaggaagaaactat-aaataaattaaaaagcaaacactatactttcatagtgat-ttcttttctgttgctgaaaaagaaatcattgtacatt-ataaa 243  Q
    ||||| ||||||| |  ||||||||||||||  |||||||||||| |||||||||| || ||||||  ||    |||  ||||||||||  ||| |||||    
T  18722113 caaag-aagaaacaaacaaataaattaaaaataaaacactatactctcatagtgatattattttct--tgacataaacaaaatcattgtgaatttataaa 18722209  T
Q  244 tatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaac 343  Q
    |||||||| |||||||||||  |||||||||||||||||||  ||||| |||| |||||||||  |||  ||||||  | | |||||||| || ||||||    
T  18722210 tatatacaattagaaaatgaaattatttcacttgccttgctgcaaataatagatgatagagacactgaggaacatcgattcaatttcaatactctcaaac 18722309  T
Q  344 tgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttcttgtctat 443  Q
    ||||| ||||||||||| || |||||||| ||  | |||||| ||| ||||||||||| |   |||||||||| |||||||||||||| |||  ||||||    
T  18722310 tgcttggaagatacttgggatctttagaaaaagagacatttttaataataagtgttttgagatttgtcatcttcttgaaggcctttccattccagtctat 18722409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 8 - 446
Target Start/End: Original strand, 18687515 - 18687952
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||| ||||||||| |||||||||| ||| || || | ||||||||||| ||| ||| |||||| ||||||||| |||||||||| ||||| |||||    
T  18687515 tgaattgcaattaaattattacaatattaaaacgagaattattctaaatttggaagacctaagacattgggtatatgggttaaatattgacaattgtcca 18687614  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaac-tataaataaattaaaaagcaaacactatactttcatagtgat-ttct 205  Q
    || |||||| | |||||||||  ||| |||||||||||||||| ||||||||  | ||||||||||||||  |||||||||||| || || |||| || |    
T  18687615 atgtcaagactttcatatcctcaaacctctgcataaacacaaa-gaagaaacaaacaaataaattaaaaataaaacactatactctcgtaatgatattat 18687713  T
Q  206 tttctgttgctgaaaaagaaatcattgt-acattataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagag 304  Q
    ||||| |  | ||| |  |||||||||| |  ||||||||||||||| |||||||||||  |||||||||||||||||||   ||||| ||| |||||||    
T  18687714 tttct-tgacagaaca--aaatcattgtgaatttataaatatatacatttagaaaatgaaattatttcacttgccttgctgccaatacaagatgatagag 18687810  T
Q  305 actttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaa 404  Q
    ||| ||   ||||||| | | |||||||| || ||||||||||| ||||||||||| || |||||| | ||  | |||||| ||| ||||||||||| |     
T  18687811 actctgtagaacatccattcaatttcaatactctcaaactgcttggaagatacttgggatctttagtaaaagagacatttttaataataagtgttttgag 18687910  T
Q  405 tcttgtcatctttttgaaggcctttcctttcttgtctattac 446  Q
      |||||||||| ||||| |||||||| |||  |||||||||    
T  18687911 atttgtcatcttcttgaaagcctttccattccagtctattac 18687952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 408 - 504
Target Start/End: Complemental strand, 18075709 - 18075613
Alignment:
Q  408 tgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaa 504  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||  ||||||| ||||    
T  18075709 tgtcatcttcttgaaggcctttccattcttgtctattacggattccatagagtgcaaattcatatatatcatttcaattttactggttcccttttaa 18075613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 18076059 - 18075901
Alignment:
Q  44 aacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaatatcaagattgtcatatcctggaacttctgcataa 143  Q
    |||||||||||||||| ||||| ||||||||||||| |||   |||||| || ||||| ||| |||||||| | | |||||| ||  | |||||||||||    
T  18076059 aacttttctaaatttggaagccatgagacatcgggtgtatagattaaatcttgacaattgtcgaatatcaacactttcatattctcaagcttctgcataa 18075960  T
Q  144 acacaaaggaagaaactataaataaat---taaaaagcaaacactatactttcatagtga 200  Q
    ||||| | |||||||| | ||||||||   |||||| ||||||||||||| |||||||||    
T  18075959 acacaca-gaagaaacaaaaaataaataaataaaaaccaaacactatactctcatagtga 18075901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 611 - 742
Target Start/End: Complemental strand, 18075506 - 18075374
Alignment:
Q  611 tccaaaatgagcaaagttgtattaaaa-ctaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatc 709  Q
    ||||||| |||||||||  | |||||| |||||||||||||||  | |  ||||||||||||| |||||||||||||| || ||| | || |||||| |     
T  18075506 tccaaaaagagcaaagtcatgttaaaagctaaataacaaattgttcctgcatatcaatcttactcacagtgttttcttctagaacttcaaatatatcctt 18075407  T
Q  710 ttgagaccataacctgcttctttctccaggctc 742  Q
    || | |||||||||||||||||| |||||||||    
T  18075406 ttcaaaccataacctgcttctttttccaggctc 18075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 103; Significance: 7e-51; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 15581 - 15404
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| | |||   |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||  ||||||    
T  15581 tgaattgtaattaaattataacatctttcaaacgataacttttctaaatttgaaaggcctgagacatcgggtatatgtgttaaatatttacatcggtcca 15482  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaacacaaaggaagaaactataaataaattaaaaagcaaacacta 186  Q
    ||||||||| | |||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| |||| ||||    
T  15481 atatcaagactttcatatcctggaacttctgcataaacac-aagaaagaaacaataaataaactaaaaatcaaagacta 15404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 595 - 746
Target Start/End: Original strand, 1957 - 2109
Alignment:
Q  595 agatggtcatatttagtc-caaaatgagcaaagttgtattaaaactaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaa 693  Q
    ||||| |||||||||||  ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||| ||||||    
T  1957 agatgatcatatttagttacaaaaagagcaaagttgtattaaaactaaataacaaaatgatcatagatatcaatcttactcacagtgttttctcttaaaa 2056  T
Q  694 catgaactatatcatcttgagaccataacctgcttctttctccaggctcttta 746  Q
    || ||||||||||||| ||| | |||||||| |||||||||||||||||||||    
T  2057 cacgaactatatcatcctgacagcataacctacttctttctccaggctcttta 2109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 266 - 375
Target Start/End: Complemental strand, 15351 - 15242
Alignment:
Q  266 ttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgctttcaaactgcttcgaagatacttgagacc 365  Q
    ||||||||||||||||| ||||||| ||||| || ||| |||| ||||||||||||| |||||||||| |  ||||||||||| ||||||||||||||||    
T  15351 ttatttcacttgccttgtttaaaatcctagatgacagacacttcgataaacatcctttccatttcaatacactcaaactgcttggaagatacttgagacc 15252  T
Q  366 tttagaacaa 375  Q
    ||||||||||    
T  15251 tttagaacaa 15242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 237 - 499
Target Start/End: Original strand, 17991277 - 17991539
Alignment:
Q  237 ttataaatatatacagttagaaaatgattttatttcacttgccttgcttaaaatactagacgatagagactttgataaacatccttcccatttcaatgct 336  Q
    ||||||||||| ||| ||  |||||||  ||||||||||||||||  |  ||| || ||| ||||||||||||||   |||||||| |||||||||| ||    
T  17991277 ttataaatatacacaattccaaaatgaaattatttcacttgccttattcgaaaaacaagatgatagagactttgaaggacatcctttccatttcaatact 17991376  T
Q  337 ttcaaactgcttcgaagatacttgagacctttagaacaatggccattttcaatgataagtgttttcaatcttgtcatctttttgaaggcctttcctttct 436  Q
     |||||||  || ||||||||||| |||||| |||| ||||| |||||||||||||||||||||| | | || ||||||| |||||||||||||| |||     
T  17991377 ctcaaactatttggaagatacttgggaccttcagaaaaatggtcattttcaatgataagtgttttgagttttttcatcttcttgaaggcctttccattcc 17991476  T
Q  437 tgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccct 499  Q
     | || |||| |||| ||| || |  |||||| || ||||||||||| |||||| ||||||||    
T  17991477 agactgttacggatttcatggaatcgaaattcgtatatatcatttcaattttactagttccct 17991539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 17991083 - 17991219
Alignment:
Q  8 tgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtcca 107  Q
    ||||||||||||||||| ||||| | ||||||||| |||| || |||  ||  ||| ||||||||||||||||| |   ||||||||| |||| |||  |    
T  17991083 tgaattgtaattaaattattacactcttcaaatgagaactcttttaagctttgaagacctgagacatcgggtattttcattaaatattgacaacggttaa 17991182  T
Q  108 atatcaagattgtcatatcctggaacttctgcataaa 144  Q
    || |||||| | |||||| || |||||||||||||||    
T  17991183 atgtcaagactttcatattctcgaacttctgcataaa 17991219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 9e-29; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 408 - 505
Target Start/End: Complemental strand, 61517 - 61420
Alignment:
Q  408 tgtcatctttttgaaggcctttcctttcttgtctattacagattccatagagtgcaaattcatacatatcatttcagttttaccagttccctgttaac 505  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||  ||||||| |||||    
T  61517 tgtcatcttcttgaaggcctttccattcttgtctattacggattccatagagtgcaaattcatatatatcatttcaattttactggttcccttttaac 61420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 61867 - 61709
Alignment:
Q  44 aacttttctaaatttgaaagccctgagacatcgggtatatgtgttaaatattcacaatggtccaatatcaagattgtcatatcctggaacttctgcataa 143  Q
    |||||||||||||||| ||||| ||||||||||||| |||   |||||| || ||||| ||| |||||||| | | |||||| ||  | |||||||||||    
T  61867 aacttttctaaatttggaagccatgagacatcgggtgtatagattaaatcttgacaattgtcgaatatcaacactttcatattctcaagcttctgcataa 61768  T
Q  144 acacaaaggaagaaactataaataaat---taaaaagcaaacactatactttcatagtga 200  Q
    ||||| | |||||||| | ||||||||   |||||| ||||||||||||| |||||||||    
T  61767 acacaca-gaagaaacaaaaaataaataaataaaaaccaaacactatactctcatagtga 61709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 611 - 742
Target Start/End: Complemental strand, 61314 - 61182
Alignment:
Q  611 tccaaaatgagcaaagttgtattaaaa-ctaaataacaaattgaacatagatatcaatcttacgcacagtgttttcttttaaaacatgaactatatcatc 709  Q
    ||||||| |||||||||  | |||||| |||||||||||||||  | |  ||||||||||||| |||||||||||||| || ||| | || |||||| |     
T  61314 tccaaaaagagcaaagtcatgttaaaagctaaataacaaattgttcctgcatatcaatcttactcacagtgttttcttctagaacttcaaatatatcctt 61215  T
Q  710 ttgagaccataacctgcttctttctccaggctc 742  Q
    || | |||||||||||||||||| |||||||||    
T  61214 ttcaaaccataacctgcttctttttccaggctc 61182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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