View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4693-Insertion-4 (Length: 539)

Name: NF4693-Insertion-4
Description: NF4693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4693-Insertion-4
NF4693-Insertion-4
[»] chr3 (49 HSPs)
chr3 (7-539)||(42837069-42837586)
chr3 (335-399)||(37568566-37568632)
chr3 (436-511)||(48367766-48367840)
chr3 (436-494)||(28511433-28511491)
chr3 (335-379)||(16146839-16146883)
chr3 (330-402)||(25396440-25396512)
chr3 (442-494)||(28482621-28482673)
chr3 (436-484)||(40550123-40550171)
chr3 (335-379)||(40550257-40550301)
chr3 (436-484)||(42156421-42156469)
chr3 (436-484)||(54851428-54851476)
chr3 (468-511)||(6135009-6135052)
chr3 (376-431)||(13883373-13883428)
chr3 (436-511)||(16207167-16207242)
chr3 (440-511)||(20189776-20189847)
chr3 (337-399)||(35105255-35105318)
chr3 (335-431)||(37671528-37671626)
chr3 (297-371)||(41992930-41993005)
chr3 (335-399)||(42879900-42879966)
chr3 (335-399)||(43974184-43974250)
chr3 (436-511)||(46291392-46291467)
chr3 (439-494)||(53594386-53594441)
chr3 (335-399)||(53594506-53594572)
chr3 (453-487)||(4182874-4182908)
chr3 (436-494)||(25396663-25396721)
chr3 (469-511)||(41544409-41544451)
chr3 (442-484)||(42629169-42629211)
chr3 (335-399)||(20274946-20275011)
chr3 (335-399)||(29217368-29217433)
chr3 (470-511)||(38570827-38570868)
chr3 (337-399)||(43862785-43862849)
chr3 (299-379)||(50660760-50660841)
chr3 (335-399)||(54617530-54617595)
chr3 (346-399)||(55384306-55384359)
chr3 (469-505)||(7865391-7865427)
chr3 (436-484)||(14745586-14745634)
chr3 (335-379)||(18713289-18713333)
chr3 (335-379)||(25799273-25799317)
chr3 (335-399)||(31230214-31230278)
chr3 (297-402)||(33804843-33804950)
chr3 (297-417)||(37671609-37671732)
chr3 (335-399)||(40007009-40007073)
chr3 (335-379)||(41187494-41187538)
chr3 (335-379)||(42629032-42629076)
chr3 (335-379)||(43081335-43081379)
chr3 (443-495)||(44117622-44117674)
chr3 (335-379)||(45474656-45474700)
chr3 (297-402)||(45779024-45779134)
chr3 (471-507)||(49221171-49221207)
[»] chr5 (49 HSPs)
chr5 (436-494)||(21063829-21063887)
chr5 (442-511)||(10596594-10596663)
chr5 (436-511)||(37978242-37978317)
chr5 (442-511)||(29653978-29654047)
chr5 (336-433)||(35434006-35434103)
chr5 (344-404)||(11112897-11112957)
chr5 (297-402)||(7483323-7483430)
chr5 (436-511)||(26910842-26910917)
chr5 (436-511)||(31703511-31703586)
chr5 (335-399)||(1007753-1007818)
chr5 (470-511)||(27581846-27581887)
chr5 (335-399)||(43514812-43514877)
chr5 (335-399)||(26522099-26522163)
chr5 (436-484)||(28003038-28003086)
chr5 (360-431)||(35420929-35421001)
chr5 (436-484)||(40975589-40975637)
chr5 (452-511)||(27581464-27581523)
chr5 (335-399)||(41651338-41651404)
chr5 (297-370)||(5160858-5160932)
chr5 (297-379)||(11092594-11092676)
chr5 (436-494)||(14478444-14478502)
chr5 (436-494)||(16429754-16429812)
chr5 (321-379)||(17229360-17229417)
chr5 (436-494)||(30889111-30889168)
chr5 (335-399)||(38891877-38891943)
chr5 (338-399)||(39741164-39741226)
chr5 (335-399)||(103898-103965)
chr5 (435-484)||(4209990-4210039)
chr5 (335-399)||(6987780-6987845)
chr5 (346-399)||(15715943-15715996)
chr5 (335-399)||(37249992-37250057)
chr5 (436-484)||(104029-104077)
chr5 (335-379)||(4000705-4000749)
chr5 (335-379)||(7411289-7411333)
chr5 (335-379)||(8525972-8526016)
chr5 (335-379)||(14692745-14692789)
chr5 (467-511)||(16218833-16218877)
chr5 (297-391)||(16425092-16425186)
chr5 (436-484)||(24565369-24565417)
chr5 (335-379)||(24565502-24565546)
chr5 (436-484)||(24606404-24606452)
chr5 (335-379)||(24606538-24606582)
chr5 (335-399)||(28442401-28442465)
chr5 (338-399)||(31200046-31200109)
chr5 (467-495)||(33528654-33528682)
chr5 (347-431)||(35360904-35360987)
chr5 (436-484)||(40509543-40509591)
chr5 (335-379)||(42661588-42661632)
chr5 (436-492)||(43211761-43211817)
[»] chr8 (62 HSPs)
chr8 (305-403)||(32722830-32722930)
chr8 (436-511)||(11097021-11097096)
chr8 (469-511)||(6655776-6655818)
chr8 (469-511)||(6736178-6736220)
chr8 (438-510)||(6601280-6601351)
chr8 (438-510)||(6676733-6676804)
chr8 (452-511)||(2828538-2828597)
chr8 (436-511)||(8525321-8525396)
chr8 (436-511)||(22653108-22653183)
chr8 (436-511)||(22200014-22200089)
chr8 (452-495)||(34010390-34010433)
chr8 (436-494)||(21141889-21141946)
chr8 (467-516)||(11602462-11602511)
chr8 (335-399)||(34114957-34115022)
chr8 (462-511)||(34288387-34288435)
chr8 (335-399)||(35213626-35213691)
chr8 (330-398)||(10605672-10605740)
chr8 (335-399)||(9655634-9655700)
chr8 (297-391)||(11169940-11170035)
chr8 (297-400)||(13013168-13013274)
chr8 (436-511)||(33128846-33128921)
chr8 (472-511)||(34010755-34010794)
chr8 (436-511)||(34115086-34115161)
chr8 (297-379)||(40668654-40668737)
chr8 (436-511)||(42025844-42025918)
chr8 (335-399)||(42309622-42309688)
chr8 (335-399)||(42641096-42641162)
chr8 (469-511)||(5728720-5728762)
chr8 (437-494)||(15898330-15898385)
chr8 (335-381)||(19294919-19294965)
chr8 (335-399)||(26544041-26544107)
chr8 (297-400)||(1770047-1770152)
chr8 (335-399)||(5059840-5059907)
chr8 (474-511)||(6745487-6745523)
chr8 (436-497)||(11148009-11148070)
chr8 (335-397)||(14395488-14395552)
chr8 (335-399)||(18173244-18173309)
chr8 (335-399)||(18252647-18252712)
chr8 (335-399)||(21134607-21134672)
chr8 (435-484)||(23247885-23247934)
chr8 (335-399)||(36091506-36091571)
chr8 (365-402)||(44833792-44833829)
chr8 (335-379)||(125242-125286)
chr8 (335-379)||(616049-616093)
chr8 (335-379)||(622442-622486)
chr8 (467-511)||(2211743-2211787)
chr8 (297-408)||(2433672-2433787)
chr8 (330-402)||(7761983-7762055)
chr8 (335-379)||(8525482-8525526)
chr8 (345-402)||(9198189-9198248)
chr8 (436-484)||(11603029-11603077)
chr8 (346-417)||(12184823-12184895)
chr8 (346-417)||(12429251-12429323)
chr8 (442-494)||(14395364-14395416)
chr8 (436-484)||(17953052-17953100)
chr8 (297-357)||(19164622-19164682)
chr8 (335-399)||(20052126-20052190)
chr8 (467-495)||(25564093-25564121)
chr8 (297-402)||(28192592-28192700)
chr8 (335-379)||(30025688-30025732)
chr8 (452-484)||(30025833-30025865)
chr8 (436-484)||(44724579-44724627)
[»] scaffold0111 (1 HSPs)
scaffold0111 (436-511)||(40390-40465)
[»] chr2 (45 HSPs)
chr2 (436-511)||(26968216-26968291)
chr2 (436-495)||(13324476-13324535)
chr2 (436-494)||(40443518-40443576)
chr2 (436-494)||(40504695-40504753)
chr2 (335-399)||(34423086-34423152)
chr2 (436-507)||(39146400-39146471)
chr2 (436-494)||(42873826-42873884)
chr2 (442-507)||(30829569-30829634)
chr2 (335-399)||(39007786-39007851)
chr2 (332-399)||(17158248-17158316)
chr2 (332-400)||(21971239-21971307)
chr2 (436-484)||(27277617-27277665)
chr2 (335-379)||(36450460-36450504)
chr2 (452-511)||(2359003-2359061)
chr2 (436-511)||(5475690-5475764)
chr2 (456-511)||(21391470-21391525)
chr2 (452-511)||(32347751-32347810)
chr2 (436-511)||(36595217-36595291)
chr2 (335-397)||(41438034-41438097)
chr2 (335-381)||(5475561-5475607)
chr2 (469-511)||(43640074-43640116)
chr2 (442-511)||(9437092-9437161)
chr2 (442-491)||(14889989-14890038)
chr2 (297-369)||(15156736-15156809)
chr2 (297-400)||(16064642-16064747)
chr2 (335-399)||(17548541-17548606)
chr2 (443-496)||(23390329-23390382)
chr2 (457-494)||(29134116-29134153)
chr2 (297-374)||(40073475-40073552)
chr2 (435-511)||(5192202-5192278)
chr2 (436-484)||(11656433-11656481)
chr2 (335-379)||(11752884-11752928)
chr2 (467-511)||(12068099-12068143)
chr2 (436-484)||(12565519-12565567)
chr2 (297-402)||(14786653-14786760)
chr2 (297-431)||(16403201-16403337)
chr2 (467-495)||(16872665-16872693)
chr2 (442-494)||(18910840-18910892)
chr2 (335-379)||(19436983-19437027)
chr2 (335-379)||(20579634-20579678)
chr2 (436-484)||(21011093-21011141)
chr2 (335-379)||(22083295-22083339)
chr2 (436-484)||(35808296-35808344)
chr2 (436-512)||(43066875-43066951)
chr2 (442-494)||(45249006-45249058)
[»] chr4 (53 HSPs)
chr4 (452-511)||(20203752-20203811)
chr4 (436-511)||(35683365-35683440)
chr4 (462-511)||(34020398-34020447)
chr4 (436-484)||(8117249-8117297)
chr4 (436-484)||(51042632-51042680)
chr4 (436-511)||(1924094-1924169)
chr4 (335-399)||(8117361-8117427)
chr4 (436-494)||(16071676-16071734)
chr4 (435-484)||(32800863-32800912)
chr4 (335-399)||(35120177-35120242)
chr4 (436-484)||(9370020-9370068)
chr4 (436-484)||(10458946-10458994)
chr4 (442-490)||(12591210-12591258)
chr4 (467-511)||(24977225-24977269)
chr4 (335-399)||(1825808-1825874)
chr4 (335-399)||(8080252-8080318)
chr4 (436-511)||(22008004-22008079)
chr4 (436-511)||(26487827-26487902)
chr4 (335-399)||(30112494-30112560)
chr4 (335-399)||(32800975-32801041)
chr4 (463-494)||(44380898-44380929)
chr4 (335-399)||(47805139-47805205)
chr4 (452-495)||(50803258-50803301)
chr4 (346-408)||(21454557-21454618)
chr4 (346-399)||(25811273-25811327)
chr4 (296-342)||(39669829-39669875)
chr4 (453-511)||(48736466-48736524)
chr4 (335-381)||(54788879-54788925)
chr4 (435-484)||(8080140-8080189)
chr4 (335-399)||(29965018-29965083)
chr4 (346-399)||(44569389-44569441)
chr4 (462-511)||(46472757-46472806)
chr4 (335-399)||(56360270-56360335)
chr4 (335-379)||(1924257-1924301)
chr4 (335-379)||(2904798-2904842)
chr4 (335-379)||(6213122-6213166)
chr4 (335-379)||(7111394-7111438)
chr4 (442-494)||(16946206-16946257)
chr4 (467-511)||(20943680-20943724)
chr4 (442-494)||(22529342-22529394)
chr4 (436-484)||(22787160-22787208)
chr4 (297-400)||(23623984-23624088)
chr4 (436-484)||(25368912-25368960)
chr4 (443-511)||(28424562-28424630)
chr4 (335-379)||(28567809-28567853)
chr4 (467-511)||(30188512-30188556)
chr4 (467-511)||(35074914-35074958)
chr4 (442-494)||(38348482-38348534)
chr4 (436-484)||(38705061-38705109)
chr4 (335-379)||(39652396-39652440)
chr4 (467-511)||(43621976-43622020)
chr4 (471-511)||(44264125-44264165)
chr4 (436-480)||(49120507-49120551)
[»] chr1 (50 HSPs)
chr1 (456-507)||(42410647-42410698)
chr1 (436-507)||(1053459-1053530)
chr1 (335-399)||(34069859-34069925)
chr1 (436-511)||(34069989-34070064)
chr1 (297-399)||(52510628-52510731)
chr1 (297-402)||(33826179-33826285)
chr1 (442-511)||(41901372-41901442)
chr1 (346-399)||(22866636-22866689)
chr1 (346-399)||(31636804-31636857)
chr1 (462-511)||(39368430-39368479)
chr1 (467-511)||(5964420-5964464)
chr1 (335-399)||(20748713-20748777)
chr1 (436-484)||(21248954-21249002)
chr1 (436-484)||(23800325-23800373)
chr1 (335-379)||(30280621-30280665)
chr1 (436-511)||(538529-538604)
chr1 (436-511)||(3751386-3751461)
chr1 (335-399)||(3751525-3751591)
chr1 (337-408)||(8887538-8887609)
chr1 (335-402)||(8887609-8887675)
chr1 (335-399)||(43226855-43226921)
chr1 (335-399)||(47844135-47844201)
chr1 (469-511)||(30022739-30022781)
chr1 (436-494)||(33524206-33524264)
chr1 (452-494)||(37848100-37848142)
chr1 (436-494)||(43846418-43846476)
chr1 (330-399)||(48411233-48411303)
chr1 (330-401)||(48411300-48411373)
chr1 (453-494)||(13566329-13566370)
chr1 (435-484)||(14420890-14420939)
chr1 (456-493)||(37232759-37232796)
chr1 (335-399)||(44733815-44733880)
chr1 (335-399)||(52826721-52826786)
chr1 (335-379)||(538691-538735)
chr1 (335-399)||(3536468-3536532)
chr1 (338-399)||(4369362-4369425)
chr1 (467-511)||(9003745-9003789)
chr1 (442-494)||(18302433-18302485)
chr1 (436-492)||(23488183-23488239)
chr1 (436-484)||(32924630-32924678)
chr1 (443-511)||(33417883-33417951)
chr1 (436-484)||(35367083-35367131)
chr1 (298-402)||(36566647-36566754)
chr1 (436-484)||(38213154-38213202)
chr1 (436-484)||(40434412-40434460)
chr1 (442-494)||(44778785-44778837)
chr1 (335-379)||(45143758-45143802)
chr1 (335-379)||(46634745-46634789)
chr1 (467-511)||(46801776-46801820)
chr1 (335-379)||(49580147-49580191)
[»] chr7 (39 HSPs)
chr7 (436-513)||(31480818-31480895)
chr7 (436-495)||(12422969-12423028)
chr7 (335-399)||(32436723-32436789)
chr7 (297-402)||(45864104-45864211)
chr7 (436-511)||(19203884-19203960)
chr7 (439-495)||(21403566-21403621)
chr7 (442-494)||(29127891-29127943)
chr7 (436-492)||(30255674-30255730)
chr7 (335-399)||(45864194-45864258)
chr7 (298-402)||(46414055-46414159)
chr7 (297-399)||(48154258-48154362)
chr7 (456-511)||(1983032-1983087)
chr7 (335-399)||(2963246-2963312)
chr7 (330-399)||(19919499-19919570)
chr7 (335-399)||(21832286-21832352)
chr7 (455-494)||(22755793-22755832)
chr7 (436-511)||(43301524-43301599)
chr7 (335-399)||(45986890-45986956)
chr7 (442-484)||(1694458-1694500)
chr7 (452-494)||(1975933-1975975)
chr7 (436-490)||(3674260-3674314)
chr7 (452-494)||(40658173-40658215)
chr7 (335-399)||(43725822-43725888)
chr7 (442-511)||(33654025-33654094)
chr7 (442-511)||(34826560-34826629)
chr7 (335-372)||(41648446-41648483)
chr7 (335-384)||(43301680-43301729)
chr7 (335-399)||(1983170-1983234)
chr7 (436-484)||(6345521-6345569)
chr7 (321-429)||(16371811-16371918)
chr7 (462-494)||(24463354-24463386)
chr7 (335-399)||(29372306-29372370)
chr7 (346-402)||(29654670-29654726)
chr7 (436-484)||(32750215-32750263)
chr7 (456-511)||(33690354-33690409)
chr7 (335-379)||(34327097-34327141)
chr7 (436-484)||(38574951-38574999)
chr7 (436-484)||(45987020-45987068)
chr7 (462-494)||(48295148-48295180)
[»] scaffold0024 (1 HSPs)
scaffold0024 (335-399)||(37632-37698)
[»] chr6 (14 HSPs)
chr6 (452-511)||(9373371-9373430)
chr6 (436-494)||(18497513-18497571)
chr6 (436-494)||(21215366-21215424)
chr6 (435-487)||(4812806-4812858)
chr6 (335-399)||(7575942-7576006)
chr6 (344-399)||(30579745-30579799)
chr6 (346-399)||(11261685-11261739)
chr6 (335-399)||(1962622-1962687)
chr6 (436-511)||(1092153-1092226)
chr6 (436-484)||(1962751-1962799)
chr6 (436-484)||(10839078-10839126)
chr6 (436-484)||(12264950-12264998)
chr6 (436-484)||(28580743-28580791)
chr6 (436-484)||(33684388-33684436)
[»] scaffold0164 (1 HSPs)
scaffold0164 (436-494)||(11194-11252)
[»] scaffold0936 (1 HSPs)
scaffold0936 (335-379)||(846-890)
[»] scaffold0121 (1 HSPs)
scaffold0121 (467-507)||(3001-3041)
[»] scaffold0041 (1 HSPs)
scaffold0041 (336-399)||(28339-28403)
[»] scaffold0032 (1 HSPs)
scaffold0032 (436-484)||(36389-36437)
[»] scaffold0022 (1 HSPs)
scaffold0022 (436-484)||(138746-138794)
[»] scaffold0001 (1 HSPs)
scaffold0001 (436-484)||(439908-439956)


Alignment Details
Target: chr3 (Bit Score: 454; Significance: 0; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 7 - 539
Target Start/End: Complemental strand, 42837586 - 42837069
Alignment:
Q  7 aagttggacacacgatttatggaatttgatagaatttaacatctccaaaatacttgaagggttaatcatggaagataaaatagcatataaatcattccaa 106  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42837586 aagttggacacacgatttatggaatttgatagaatttaccatctccaaaatacttgaagggttaatcatggaagataaaatagcatataaatcattccaa 42837487  T
Q  107 atataaataaagtatttcaacaaacagttcagtaaataatacatttatgctgctttatgcactttctttctggatatatatacagcaacacaatgcacac 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||||||||||||    
T  42837486 atataaataaagtatttcaacaaacagttcagtaaataatacatttatgctgctttatgcactttctttctgga----tatacaacaacacaatgcacac 42837391  T
Q  207 gtactataaatttgttgaagggttgtctatttctcaaacatttagaaaactatttattaatgtttcacagaagaaaaaatcgataagaaaatgaattgaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  42837390 gtactataaatttgttgaagggttgtctatttctcaaacatttagaaaactatttattaatgtttcacagaagaaaaaatcgataagaaa---------- 42837301  T
Q  307 tatgaatttttacgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattctaagca 406  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42837300 -atgaatttttacgttttgacgcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattctaagca 42837202  T
Q  407 ttcccgcaaaaactcattcaaaaatcttaagggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaa 506  Q
    || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42837201 tttccgcaaaaactcattcaaaaatcttaagggaccaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaa 42837102  T
Q  507 cgaaataaaaaacatattttattttaccatata 539  Q
    ||||||||||| |||||||||||||||||||||    
T  42837101 cgaaataaaaatcatattttattttaccatata 42837069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 37568632 - 37568566
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||||||  || ||||||||||||| ||||||||||    
T  37568632 aattcatattaaattcatgttttgttaaaaaattctaaattttttttggagaaattcttataatatt 37568566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 48367840 - 48367766
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||||||||  ||||||||||||||||||| |||||||   ||||||||||||||    
T  48367840 agggaccaaaagtgaagatggaaaacttttt-gggactaaaagttgaagaatttttttagagggattaaaacgaaa 48367766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 28511491 - 28511433
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  ||||||||| |||| || |||||||||||||||||||||||||    
T  28511491 agggaccaaaagtgaagatggaaaattttttagagactaaaagttgaagaaatttttta 28511433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 16146883 - 16146839
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||    
T  16146883 aattcatattaaattcatgttttgttaaacaattctaattttttt 16146839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 25396512 - 25396440
Alignment:
Q  330 ttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattcta 402  Q
    |||| |||||||| | |||| ||||||||||||| |||||||||| ||||  |||| |||||| |||||||||    
T  25396512 ttaaaaattcatatttaatttatgttttgctaaaaaattctaatttttttttagaattttttaaaatattcta 25396440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 494
Target Start/End: Complemental strand, 28482673 - 28482621
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  ||||||||| |||| || |||||||||||||||||||||||||    
T  28482673 caaaagtgaagatggaaaaatttttagagactaaaagttgaagaaatttttta 28482621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 40550171 - 40550123
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  40550171 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaag 40550123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 40550301 - 40550257
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||    
T  40550301 aattcatactaaattcatgttttgttaaaaaattctaattttttt 40550257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 42156469 - 42156421
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  42156469 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaag 42156421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 54851476 - 54851428
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  54851476 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaag 54851428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 6135009 - 6135052
Alignment:
Q  468 gggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  6135009 gggactaaaagttgaagaaattttttagagggattaaaacgaaa 6135052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 431
Target Start/End: Original strand, 13883373 - 13883428
Alignment:
Q  376 ttttggagaaatttttataatattctaagcattcccgcaaaaactcattcaaaaat 431  Q
    ||||||||| |||||||||||||||||| |||| | ||||||| ||||| ||||||    
T  13883373 ttttggagatatttttataatattctaaacattgctgcaaaaattcattaaaaaat 13883428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 16207167 - 16207242
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||| |||||||||||||||||| ||  |||||   ||||||||||||||    
T  16207167 agggaccaaaagtgaagatggaaaaatttttagggactaaaagttgaaggaaaattttagagggattaaaacgaaa 16207242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 511
Target Start/End: Original strand, 20189776 - 20189847
Alignment:
Q  440 atcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||  |||| |||| ||| ||| |||||||||||||||||| |||||||   |||||||||||||    
T  20189776 atcaaaagtgaagatgaaaaattttaaagagactaaaagttgaagaaactttttaaagagattaaaacgaaa 20189847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 35105318 - 35105255
Alignment:
Q  337 ttcatactaaattcatgttttgctaaacaattctaattcttttgg-agaaatttttataatatt 399  Q
    |||||| ||||||||||||||| |||| |||||||||| |||||| ||| ||| ||||||||||    
T  35105318 ttcatattaaattcatgttttgttaaaaaattctaatttttttggcagagattattataatatt 35105255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 431
Target Start/End: Complemental strand, 37671626 - 37671528
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttataatattctaagcattcccgcaaaaactcattcaaaaat 431  Q
    |||||||| | ||||||||||||| |||| ||||||||  |||| | ||||| ||| ||||||||| |||  |||||| ||||||  ||||||||||||    
T  37671626 aattcatatttaattcatgttttgttaaaaaattctaattttctctaggagagattcttataatatactatacattcctgcaaaatttcattcaaaaat 37671528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 41993005 - 41992930
Alignment:
Q  297 atgaattgaatatgaatttttacgttttg-gcgcttaagaattcatactaaattcatgttttgctaaacaattcta 371  Q
    ||||||| |||||||||||||| |||||  | ||| || |||||||| ||||||||||||||| |||| |||||||    
T  41993005 atgaattaaatatgaatttttatgttttttgtgctaaaaaattcatattaaattcatgttttgttaaaaaattcta 41992930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 42879900 - 42879966
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  42879900 aattcatattaaattcatgttttgttaaaaaattctaatttttttagggagagattcttataatatt 42879966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 43974250 - 43974184
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  43974250 aattcatattaaattcatgttttgttaaaaaattctaatttttttagggagagattcttataatatt 43974184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 46291392 - 46291467
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||  |||| |||||||||   | |||||||| ||||||||||||||||   |||||||||||||    
T  46291392 agggatcaaaagtgaagatgaaaaactttttgagaactaaaagatgaagaaattttttaaagtgattaaaacgaaa 46291467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 494
Target Start/End: Complemental strand, 53594441 - 53594386
Alignment:
Q  439 gatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    |||||||||||  |||| |||| |||| ||||||| ||||||||||||||||||||    
T  53594441 gatcaaaagtgaagatgaaaaaattttgagggactgaaagttgaagaaatttttta 53594386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 53594572 - 53594506
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  |||||| || ||||||||||    
T  53594572 aattcatattaaattcatgttttgttaaaaaattctaattttttttgggagaatttcttataatatt 53594506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 487
Target Start/End: Original strand, 4182874 - 4182908
Alignment:
Q  453 atggaaaacttttaagggactaaaagttgaagaaa 487  Q
    |||||||| ||||||||||||||||||||||||||    
T  4182874 atggaaaatttttaagggactaaaagttgaagaaa 4182908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 494
Target Start/End: Original strand, 25396663 - 25396721
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  |||||||||  ||| |||| |||||||||||||||||||||||    
T  25396663 agggaccaaaagtgaagatggaaaatcttttagggtctaaaagttgaagaaatttttta 25396721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 511
Target Start/End: Original strand, 41544409 - 41544451
Alignment:
Q  469 ggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||   ||||||||||||||    
T  41544409 ggactaaaagttgaagaaattttttagagggattaaaacgaaa 41544451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 484
Target Start/End: Original strand, 42629169 - 42629211
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||  ||||||||| |||||||||||||||||||||||    
T  42629169 caaaagtgaagatggaaaatttttaagggactaaaagttgaag 42629211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 20275011 - 20274946
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt-ggagaaatttttataatatt 399  Q
    |||| ||| ||||||||||||||| |||| |||||||||| |||| ||||| ||| ||||||||||    
T  20275011 aatttatattaaattcatgttttgttaaaaaattctaatttttttaggagagattattataatatt 20274946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 29217368 - 29217433
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattc-taattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||| || || ||||||||| ||| ||||||||||    
T  29217368 aattcatattaaattcatgttttgttaaaaaattcttatttattttggagagattattataatatt 29217433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 511
Target Start/End: Original strand, 38570827 - 38570868
Alignment:
Q  470 gactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||||||||||||||  |||| ||||||||||    
T  38570827 gactaaaagttgaagaaattttttagaaggaataaaacgaaa 38570868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 43862785 - 43862849
Alignment:
Q  337 ttcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  43862785 ttcatattaaattcatgttttgttaaaaaattctaatttttttagggagagattcttataatatt 43862849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 379
Target Start/End: Complemental strand, 50660841 - 50660760
Alignment:
Q  299 gaattgaatatgaattttta-cgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    ||||| ||||||||||||||   |||||||| |||| |||||||| | |||| |||||||| |||| |||||||||| ||||    
T  50660841 gaattaaatatgaatttttataattttggcggttaaaaattcatatttaatttatgttttgttaaaaaattctaattttttt 50660760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 54617595 - 54617530
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattct-aattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||| |||| |||| ||| |||| ||||||||||    
T  54617595 aattcatattaaattcatgttttgttaaaaaattctaaatttttttagagtaattcttataatatt 54617530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 55384359 - 55384306
Alignment:
Q  346 aattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    ||||||||||||| |||| ||||||| || ||||||||| ||| ||||||||||    
T  55384359 aattcatgttttgttaaaaaattctattttttttggagatattcttataatatt 55384306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 505
Target Start/End: Original strand, 7865391 - 7865427
Alignment:
Q  469 ggactaaaagttgaagaaattttttaagaggattaaa 505  Q
    ||||||||||||||||||||||||||  |||||||||    
T  7865391 ggactaaaagttgaagaaattttttagaaggattaaa 7865427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 14745634 - 14745586
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  14745634 agggaccaaaagtgaagatggaaaatttttgagggactaaaagttgaag 14745586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 18713333 - 18713289
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  18713333 aattcatattaaattcatgttttgttaaaaaattctaattttttt 18713289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 25799317 - 25799273
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||||||||||||||||||| |||| | |||||||| ||||    
T  25799317 aattcatactaaattcatgttttgttaaaaagttctaattttttt 25799273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 31230214 - 31230278
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| || ||||| | |||| |||| ||| ||||||||||    
T  31230214 aattcatattaaattcatgttttgttaaaaaactctaaatttttttgagagattcttataatatt 31230278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 402
Target Start/End: Complemental strand, 33804950 - 33804843
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaa-atttttat 393  Q
    ||||||| ||||| |||||| | ||||| || ||| || |||||||| |||||||||||||||||||| || ||||| || ||||||| || ||||| ||    
T  33804950 atgaattaaatataaattttaatgtttttggtgctaaaaaattcatattaaattcatgttttgctaaa-aaatctaattttttttggaaaatattttcat 33804852  T
Q  394 aatattcta 402  Q
    |||||||||    
T  33804851 aatattcta 33804843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 37671609 - 37671732
Alignment:
Q  297 atgaattgaatatgaatttttacg-ttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattctt--ttggagaaatttttat 393  Q
    ||||||| |||||||||||||| | |||||| |||||| |||||||| | |||| || ||||| |||| || ||||||| ||  | ||| | ||| ||||    
T  37671609 atgaattaaatatgaatttttatgtttttggagcttaaaaattcatatttaatttatattttgttaaaaaaatctaatttttgctaggacatattcttat 37671708  T
Q  394 aatattctaagcattcccgcaaaa 417  Q
    |||||||||  |||||| ||||||    
T  37671709 aatattctatacattcctgcaaaa 37671732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 40007073 - 40007009
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| | ||||||||||||| |||| |||||||||| ||||||  ||| | ||||||||||    
T  40007073 aattcatatttaattcatgttttggtaaaaaattctaatttttttgggaaaaatcttataatatt 40007009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 41187494 - 41187538
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  41187494 aattcatattaaattcatgttttgttaaaaaattctaattttttt 41187538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 42629032 - 42629076
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  42629032 aattcatattaaattcatgttttgttaaaaaattctaattttttt 42629076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 43081379 - 43081335
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  43081379 aattcatattaaattcatgttttgttaaaaaattctaattttttt 43081335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 495
Target Start/End: Original strand, 44117622 - 44117674
Alignment:
Q  443 aaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaa 495  Q
    ||||||||||| | ||||||||| | |||||| |||| |||||||||||||||    
T  44117622 aaaagtgtggacgaaaaacttttgaaggactataagtcgaagaaattttttaa 44117674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 45474700 - 45474656
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  45474700 aattcatattaaattcatgttttgttaaaaaattctaattttttt 45474656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 402
Target Start/End: Original strand, 45779024 - 45779134
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattcta--attctttt--ggagaaattttt 391  Q
    ||||||| |||||||| |||||  |||| |||| |||| |||||||| | ||||||||||| | |||| |||||||  ||| ||||  ||||||||||||    
T  45779024 atgaattaaatatgaaattttatatttttggcggttaaaaattcatatttaattcatgtttagttaaaaaattctattattttttttgggagaaattttt 45779123  T
Q  392 ataatattcta 402  Q
    | |||||||||    
T  45779124 acaatattcta 45779134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 507
Target Start/End: Original strand, 49221171 - 49221207
Alignment:
Q  471 actaaaagttgaagaaattttttaagaggattaaaac 507  Q
    ||||||||||||||||||||||||  |||||||||||    
T  49221171 actaaaagttgaagaaattttttagaaggattaaaac 49221207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 436 - 494
Target Start/End: Original strand, 21063829 - 21063887
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  21063829 agggaccaaaagtgaagatggaaaacttttaagggactaaaagttgaagaaatttttta 21063887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 10596594 - 10596663
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||    
T  10596594 caaaagtgaagatggaaaactttttagggactaaaagttgaagaaattttttagagggattaaaacgaaa 10596663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 37978317 - 37978242
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||||| |||||||  ||| ||||||||||    
T  37978317 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaagaaaatttttaaagggactaaaacgaaa 37978242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 29654047 - 29653978
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||  |||||||||||| |  |||||||||||||||||||||||||||| |||| ||||| ||||    
T  29654047 caaaagtgaagatggaaaacttatgggggactaaaagttgaagaaattttttaaaaggactaaaatgaaa 29653978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 433
Target Start/End: Complemental strand, 35434103 - 35434006
Alignment:
Q  336 attcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattctaagcattcccgcaaaaactcattcaaaaatct 433  Q
    ||||||| | |||||||| |||| |||| |||| ||||  ||||||| |||||||||||||||||||| || ||  | ||||| ||||||||||||||    
T  35434103 attcatatttaattcatgatttgttaaaaaattataatatttttggacaaatttttataatattctaaacaatcatgtaaaaaatcattcaaaaatct 35434006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 11112897 - 11112957
Alignment:
Q  344 taaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattctaag 404  Q
    ||||||||||||||| |||| |||||||||| ||||||||| ||| |||||||||| ||||    
T  11112897 taaattcatgttttgttaaaaaattctaatttttttggagagattcttataatattataag 11112957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 402
Target Start/End: Complemental strand, 7483430 - 7483323
Alignment:
Q  297 atgaattgaatatgaatttttacgttttggc-gcttaagaattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttata 394  Q
    ||||||| ||||||||||||||  |||| |  | |||| |||||||| |||||| | |||||| ||||||||||||| || ||||||| | |||||||||    
T  7483430 atgaatttaatatgaatttttatatttttgatggttaaaaattcatattaaatttacgttttgttaaacaattctaattttttttggaaagatttttata 7483331  T
Q  395 atattcta 402  Q
    ||||||||    
T  7483330 atattcta 7483323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 26910842 - 26910917
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| ||||||||||||||||||||||| ||  |||||  |||| ||||||||||    
T  26910842 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaaggaaaattttagaaggactaaaacgaaa 26910917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 31703586 - 31703511
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||||||||| |||||||||||||||  ||||||  ||| ||||||||||    
T  31703586 agggaccaaaagtgaagatggaaaaattttaagggattaaaagttgaagaaaaattttaaagggactaaaacgaaa 31703511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 1007818 - 1007753
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt-ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||| ||||| ||| ||||||||||    
T  1007818 aattcatattaaattcatgttttgttaaaaaattctaatttttttgggagagattattataatatt 1007753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 511
Target Start/End: Original strand, 27581846 - 27581887
Alignment:
Q  470 gactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  27581846 gactaaaagttgaagaaattttttaaaaggactaaaacgaaa 27581887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 43514812 - 43514877
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttgg-agaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||||| ||| ||| ||||||||||    
T  43514812 aattcatattaaattcatgttttgttaaaaaattctaatttttttggcagagattattataatatt 43514877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 26522099 - 26522163
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||| ||| ||||||||||    
T  26522099 aattcatattaaattcatgttttgttaaaaaattctaatttttttttagagattcttataatatt 26522163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 28003038 - 28003086
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  28003038 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaag 28003086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 35421001 - 35420929
Alignment:
Q  360 taaacaattctaattcttttgga-gaaatttttataatattctaagcattcccgcaaaaactcattcaaaaat 431  Q
    ||||||||||||||  |||| || ||||||||||||||||| ||| || ||  ||||||||||||||||||||    
T  35421001 taaacaattctaatgtttttagaagaaatttttataatattataaacaatcatgcaaaaactcattcaaaaat 35420929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 40975637 - 40975589
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||  ||||||||| |||| ||||||||||||||||||    
T  40975637 agggatcaaaagtgaagatggaaaattttttagggactaaaagttgaag 40975589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 27581523 - 27581464
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||  ||| |||||||||||||||||| || ||||||  |||||||||||||||    
T  27581523 gatggaaaaaattttagggactaaaagttgaaggaaatttttagaaggattaaaacgaaa 27581464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 41651338 - 41651404
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| |||||| |||||||| ||||||||||||||| ||||  ||||| ||| ||||||||||    
T  41651338 aattcatattaaatttatgttttgttaaacaattctaattttttttgggagagattcttataatatt 41651404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 370
Target Start/End: Complemental strand, 5160932 - 5160858
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattct 370  Q
    ||||||| |||||||||||||| ||||| || ||| || |||||| | ||||||||||||||| |||| ||||||    
T  5160932 atgaattaaatatgaatttttatgtttttggtgctcaaaaattcaaattaaattcatgttttgttaaaaaattct 5160858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 11092594 - 11092676
Alignment:
Q  297 atgaattgaatatgaatttttacgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    ||||||| ||||||||||||||  |||| | | |||| |||| ||| |||||| |||||||| |||| |||||||||| ||||    
T  11092594 atgaatttaatatgaatttttatatttttgtggttaaaaatttatattaaatttatgttttgttaaaaaattctaattttttt 11092676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 494
Target Start/End: Original strand, 14478444 - 14478502
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  |||| ||||||| ||||| |||||||||| |||||||||||||    
T  14478444 agggaccaaaagtgaagatgaaaaacttgtaaggaactaaaagttaaagaaatttttta 14478502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 16429812 - 16429754
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||| ||||||||| ||||||    
T  16429812 agggaccaaaagtgaagatggaaaaatttttagggactaaaaattgaagaaacttttta 16429754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 17229417 - 17229360
Alignment:
Q  321 ttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    ||||||| ||||| |||||||| | ||||||||||||| |||| |||||||||||||||    
T  17229417 ttttggcacttaa-aattcatatttaattcatgttttgttaaaaaattctaattctttt 17229360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 494
Target Start/End: Original strand, 30889111 - 30889168
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  ||||||||| ||||| |||||||||| ||||||||||||||||    
T  30889111 agggaccaaaagtgaagatggaaaaatttta-gggactaaaaattgaagaaatttttta 30889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 38891877 - 38891943
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattct-aattctttt-ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||| |||| |||| ||||| ||||||||||||||    
T  38891877 aattcatattaaattcatgttttgttaaaaaattctcaatttttttgggagagatttttataatatt 38891943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 39741164 - 39741226
Alignment:
Q  338 tcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttataatatt 399  Q
    ||||| ||||||||||||||| |||| |||||||| || ||||||||| ||| ||||||||||    
T  39741164 tcatattaaattcatgttttgttaaaaaattctaattttttttggagagattcttataatatt 39741226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 103898 - 103965
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa---ttcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||||||   || ||||||||| ||| ||||||||||    
T  103898 aattcatattaaattcatgttttgttaaaaaattctaattttttttttggagagattcttataatatt 103965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 484
Target Start/End: Complemental strand, 4210039 - 4209990
Alignment:
Q  435 aagggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    |||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  4210039 aagggaccaaaagtgaagatggaaaatttttgagggactaaaagttgaag 4209990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 6987780 - 6987845
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattct-aattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||| |||| ||||||||  ||| ||||||||||    
T  6987780 aattcatattaaattcatgttttgttaaaaaattctgaatttttttggagtgattcttataatatt 6987845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 15715943 - 15715996
Alignment:
Q  346 aattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    ||||||||||||| |||| |||||||||| ||||||||  ||| ||||||||||    
T  15715943 aattcatgttttgttaaaaaattctaatttttttggagtgattcttataatatt 15715996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 37250057 - 37249992
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttt-tggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||  ||||| ||| ||||||||||    
T  37250057 aattcatattaaattcatgttttgttaaaaaattctaattttttagggagagattcttataatatt 37249992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 104029 - 104077
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  104029 agggaccaaaagtgaagatggaaaaatttttagggactaaaagttgaag 104077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 4000749 - 4000705
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  4000749 aattcatattaaattcatgttttgttaaaaaattctaattttttt 4000705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 7411289 - 7411333
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  7411289 aattcatattaaattcatgttttgttaaaaaattctaattttttt 7411333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 8525972 - 8526016
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  8525972 aattcatattaaattcatgttttgttaaaaaattctaattttttt 8526016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 14692745 - 14692789
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  14692745 aattcatattaaattcatgttttgttaaaaaattctaattttttt 14692789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 16218833 - 16218877
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||||  | || ||||||||||    
T  16218833 agggactaaaagttgaagaaattttttagaatgactaaaacgaaa 16218877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 391
Target Start/End: Original strand, 16425092 - 16425186
Alignment:
Q  297 atgaattgaatatgaatttttacgt-tttggcgcttaagaattcat-actaaattcatgttttgctaaacaattctaattcttttggagaaattttt 391  Q
    ||||||| ||||||||||||||  | |||| || |||| ||||||| |||||||| |||||||| |||| |||||||||| |||||||||| |||||    
T  16425092 atgaatttaatatgaatttttatatgtttgacggttaaaaattcataactaaatt-atgttttgttaaaaaattctaatt-ttttggagaatttttt 16425186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 24565417 - 24565369
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  24565417 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 24565369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 24565546 - 24565502
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  24565546 aattcatattaaattcatgttttgttaaaaaattctaattttttt 24565502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 24606452 - 24606404
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  24606452 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 24606404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 24606582 - 24606538
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  24606582 aattcatattaaattcatgttttgttaaaaaattctaattttttt 24606538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 28442465 - 28442401
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| | ||||||||||||  |||| |||||||||| ||| ||||||||| ||||| ||||    
T  28442465 aattcatatttaattcatgttttcttaaaaaattctaattttttgggagaaattcttatagtatt 28442401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 31200046 - 31200109
Alignment:
Q  338 tcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    ||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  31200046 tcatattaaattcatgttttgttaaaaaattctaattttttttaggagagattcttataatatt 31200109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 495
Target Start/End: Complemental strand, 33528682 - 33528654
Alignment:
Q  467 agggactaaaagttgaagaaattttttaa 495  Q
    |||||||||||||||||||||||||||||    
T  33528682 agggactaaaagttgaagaaattttttaa 33528654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 347 - 431
Target Start/End: Original strand, 35360904 - 35360987
Alignment:
Q  347 attcatgttttgctaaacaattctaattcttttggagaaatttttataatattctaagcattcccgcaaaaactcattcaaaaat 431  Q
    |||||||||||| |||| ||||||| || || |  ||| |||||||||||||||||| |||||  | ||||| ||||||||||||    
T  35360904 attcatgttttgttaaaaaattctactt-ttctaaagatatttttataatattctaaacattcatgtaaaaattcattcaaaaat 35360987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 40509591 - 40509543
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  |||| |||| |||||||||||||||||||||||    
T  40509591 agggaccaaaagtgaagatgaaaaatttttaagggactaaaagttgaag 40509543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 42661588 - 42661632
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  42661588 aattcatattaaattcatgttttgttaaaaaattctaattttttt 42661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 492
Target Start/End: Original strand, 43211761 - 43211817
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttt 492  Q
    ||||| ||||||||  |||| |||| ||| |||||||||||| ||||||||||||||    
T  43211761 agggaccaaaagtgaagatgaaaaaatttcaagggactaaaacttgaagaaattttt 43211817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 403
Target Start/End: Complemental strand, 32722930 - 32722830
Alignment:
Q  305 aatatgaatttttacgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattct-aattctttt-ggagaaatttttataatattcta 402  Q
    |||||||||||||| ||||| | |||||| |||||||| |  |||||||||||||||||  ||||| |||| |||| |||||||||||||||||||||||    
T  32722930 aatatgaatttttatgtttttgtgcttaaaaattcatatttgattcatgttttgctaaaatattctaaattgttttgggagaaatttttataatattcta 32722831  T
Q  403 a 403  Q
    |    
T  32722830 a 32722830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 11097021 - 11097096
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||  ||||||||| |||| ||||||||||||||||||||||||||||   ||| ||||||||||    
T  11097021 agggatcaaaagtgaagatggaaaattttttagggactaaaagttgaagaaattttttagagggactaaaacgaaa 11097096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 6655818 - 6655776
Alignment:
Q  469 ggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6655818 ggactaaaagttgaagaaattttttaagaggattaaaacgaaa 6655776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 6736220 - 6736178
Alignment:
Q  469 ggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6736220 ggactaaaagttgaagaaattttttaagaggattaaaacgaaa 6736178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 510
Target Start/End: Complemental strand, 6601351 - 6601280
Alignment:
Q  438 ggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaa 510  Q
    ||||||||||||  | ||||||| ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  6601351 ggatcaaaagtgaagttggaaaaatttta-gggactaaaagttgaagaaattctttaagtggattaaaacgaa 6601280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 510
Target Start/End: Complemental strand, 6676804 - 6676733
Alignment:
Q  438 ggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaa 510  Q
    ||||||||||||  | ||||||| ||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  6676804 ggatcaaaagtgaagttggaaaaatttta-gggactaaaagttgaagaaattctttaagtggattaaaacgaa 6676733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 2828597 - 2828538
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||| |||| |||||||||||||||||||||||||||||  ||| ||||||||||    
T  2828597 gatggaaaatttttgagggactaaaagttgaagaaattttttaaagggactaaaacgaaa 2828538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 8525396 - 8525321
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||||| ||||||   ||| ||||||||||    
T  8525396 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaagaaaatttttagagggactaaaacgaaa 8525321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 22653108 - 22653183
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||||||||||||  | || ||||||||||    
T  22653108 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaagaaattttttagaatgactaaaacgaaa 22653183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 22200014 - 22200089
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||| |||||||||||||||||| ||  |||||  |||||||||||||||    
T  22200014 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaaggaaaattttagaaggattaaaacgaaa 22200089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 495
Target Start/End: Complemental strand, 34010433 - 34010390
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaattttttaa 495  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  34010433 gatggaaaacttttatgggactaaaagttgaagaatttttttaa 34010390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 21141946 - 21141889
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||||||||||||    
T  21141946 agggaccaaaagtgaagatggaaaa-ttttgagggactaaaagttgaagaaatttttta 21141889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 516
Target Start/End: Complemental strand, 11602511 - 11602462
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaataaaa 516  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  11602511 agggactaaaagttaaagaaaatttttaaaaggattaaaacgaaaaaaaa 11602462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 34114957 - 34115022
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||| || ||||||||| ||| ||||||||||    
T  34114957 aattcatattaaattcatgttttgttaaaaaattctaattttttttggagagattcttataatatt 34115022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 511
Target Start/End: Original strand, 34288387 - 34288435
Alignment:
Q  462 ttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||    
T  34288387 ttttaagggactaaaagttgaagaaatttttagag-ggattaaaacgaaa 34288435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 35213626 - 35213691
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt-ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||| ||||| ||| ||||||||||    
T  35213626 aattcatattaaattcatgttttgttaaaaaattctaatttttttgggagagattattataatatt 35213691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 398
Target Start/End: Original strand, 10605672 - 10605740
Alignment:
Q  330 ttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatat 398  Q
    |||| |||||||| | ||||||||||||| |||| |||||||||| ||| ||||| ||||||| |||||    
T  10605672 ttaaaaattcatatttaattcatgttttgttaaaaaattctaattttttgggagagatttttacaatat 10605740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 9655700 - 9655634
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttataatatt 399  Q
    |||||||||||||||||||||||| |||| ||||||||  || ||| ||||| ||| ||||||||||    
T  9655700 aattcatactaaattcatgttttgttaaaaaattctaaatttttttgggagagattcttataatatt 9655634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 391
Target Start/End: Original strand, 11169940 - 11170035
Alignment:
Q  297 atgaattgaatatgaattttta-cgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaattttt 391  Q
    ||||||| ||||||||||||||   ||||| || |||| |||||||| | |||| |||||||| |||| |||||||||| ||| |||||| |||||    
T  11169940 atgaatttaatatgaatttttatatttttgacggttaacaattcataattaatttatgttttgttaaaaaattctaattttttgggagaatttttt 11170035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 400
Target Start/End: Original strand, 13013168 - 13013274
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttat 393  Q
    ||||||| |||||||| |||||  |||| |||| | || |||||||| | ||||||||||||| |||| ||||||||  || ||||||||  ||||||||    
T  13013168 atgaattaaatatgaacttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattctaattttattttggagtgatttttat 13013267  T
Q  394 aatattc 400  Q
    |||||||    
T  13013268 aatattc 13013274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 33128921 - 33128846
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||||||||| |||||||||||| ||| |||||   ||| ||||||||||    
T  33128921 agggaccaaaagtgaagatggaaaatttttaagggattaaaagttgaaggaatattttagagggactaaaacgaaa 33128846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 511
Target Start/End: Original strand, 34010755 - 34010794
Alignment:
Q  472 ctaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  34010755 ctaaaagttgaagaaattttttaaaaggattaaaatgaaa 34010794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 34115086 - 34115161
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||| |||||||||||||||||  ||  |||||  |||||||||||||||    
T  34115086 agggagcaaaagtgaagatggaaaaatttttagggactaaaagttgaaagaaaattttagaaggattaaaacgaaa 34115161  T

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Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 40668654 - 40668737
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    ||||||| ||||||||||||||  |||| |||| | || |||||||| | ||||||||||||| |||| |||||||||| ||||    
T  40668654 atgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattctaattttttt 40668737  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 42025918 - 42025844
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||  ||| |||||||||  |||||||||||||||||| ||  |||| |||||| ||||||||||    
T  42025918 agggatcaaaagtgaagattgaaaactttatagggactaaaagttgaaggaaaatttt-agaggactaaaacgaaa 42025844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 42309688 - 42309622
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  42309688 aattcatattaaattcatgttttgttaaaaaattctaatttttttagggagagattcttataatatt 42309622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 42641162 - 42641096
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  42641162 aattcatattaaattcatgttttgttaaaaaattctaattttttttgggagagattcttataatatt 42641096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 5728762 - 5728720
Alignment:
Q  469 ggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||||||||||||||||  ||| ||||||||||    
T  5728762 ggactaaaagttgaagaaattttttaaagggactaaaacgaaa 5728720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 494
Target Start/End: Original strand, 15898330 - 15898385
Alignment:
Q  437 gggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    |||| ||||||||  ||||||||| |||  ||||||||||||||||||||||||||||    
T  15898330 gggaccaaaagtgaagatggaaaatttt--agggactaaaagttgaagaaatttttta 15898385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 381
Target Start/End: Original strand, 19294919 - 19294965
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttgg 381  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||||    
T  19294919 aattcatattaaattcatgttttgttaaaaaattctaatttttttgg 19294965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 26544107 - 26544041
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattct-aattctttt-ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||| ||||||||| ||||| ||| ||||||||||    
T  26544107 aattcatattaaattcatgttttgttaaaaaattctaaattcttttgggagagattattataatatt 26544041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 400
Target Start/End: Original strand, 1770047 - 1770152
Alignment:
Q  297 atgaattgaatatgaatttttacgt-tttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttata 394  Q
    ||||||| ||||||||||||||  | ||||| | | || |||||||| | ||||||||||||| |||| |||||||| || ||||||||  ||||||| |    
T  1770047 atgaattaaatatgaatttttatatgtttggaggtaaaaaattcatatttaattcatgttttgttaaaaaattctaattttttttggagttatttttaca 1770146  T
Q  395 atattc 400  Q
    ||||||    
T  1770147 atattc 1770152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 5059907 - 5059840
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt---ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||   ||||| ||| ||||||||||    
T  5059907 aattcatattaaattcatgttttgttaaaaaattctaatttttttttgggagagattcttataatatt 5059840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 511
Target Start/End: Complemental strand, 6745523 - 6745487
Alignment:
Q  474 aaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  6745523 aaaagttgaagaa-ttttttaagaggattaaaacgaaa 6745487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 497
Target Start/End: Complemental strand, 11148070 - 11148009
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaaga 497  Q
    ||||||||||||||  ||| ||||  |||| |  ||||||||||||||||||||||||||||    
T  11148070 agggatcaaaagtgaagattgaaagttttttaaagactaaaagttgaagaaattttttaaga 11148009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 14395552 - 14395488
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttataata 397  Q
    |||||||| ||||||||||||||| |||| ||||||||  || ||||||||| ||| ||||||||    
T  14395552 aattcatattaaattcatgttttgttaaaaaattctaaattttttttggagatattattataata 14395488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 18173309 - 18173244
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattct-aattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||| |||| ||||||||  ||| ||||||||||    
T  18173309 aattcatattaaattcatgttttgttaaaaaattctgaatttttttggagtgattcttataatatt 18173244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 18252712 - 18252647
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattct-aattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||| |||| ||||||||  ||| ||||||||||    
T  18252712 aattcatattaaattcatgttttgttaaaaaattctaaatttttttggagtgattattataatatt 18252647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 21134607 - 21134672
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||| ||| || ||||||||| ||| ||||||||||    
T  21134607 aattcatattaaattcatgttttgttaaagaattttaattttttttggagagattcttataatatt 21134672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 484
Target Start/End: Complemental strand, 23247934 - 23247885
Alignment:
Q  435 aagggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    |||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  23247934 aagggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 23247885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 36091506 - 36091571
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattct-aattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||| |||| ||||||||  ||| ||||||||||    
T  36091506 aattcatattaaattcatgttttgttaaaaaattctgaatttttttggagtgattcttataatatt 36091571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 402
Target Start/End: Complemental strand, 44833829 - 44833792
Alignment:
Q  365 aattctaattcttttggagaaatttttataatattcta 402  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  44833829 aattctaatttttttggagaaatttttacaatattcta 44833792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 125286 - 125242
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  125286 aattcatattaaattcatgttttgttaaaaaattctaattttttt 125242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 616093 - 616049
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  616093 aattcatattaaattcatgttttgttaaaaaattctaattttttt 616049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 622486 - 622442
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  622486 aattcatattaaattcatgttttgttaaaaaattctaattttttt 622442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 2211787 - 2211743
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| |||| ||||||||||||||||||  ||||||||||||||    
T  2211787 agggattaaatgttgaagaaattttttaaagggattaaaacgaaa 2211743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 408
Target Start/End: Complemental strand, 2433787 - 2433672
Alignment:
Q  297 atgaattgaatatgaatttttacg-ttttggcgcttaagaattcatactaaattcatgttttgct--aaacaattctaa-ttcttttggagaaattttta 392  Q
    ||||||| |||||||||||||| | ||||||  ||||| |||||||| | ||||||||||||| |  ||| || ||||| || ||||||||| ||| | |    
T  2433787 atgaattaaatatgaatttttatgtttttggtacttaaaaattcatatttaattcatgttttgttaaaaaaaaatctaattttttttggagatattctca 2433688  T
Q  393 taatattctaagcatt 408  Q
    ||||||| ||||||||    
T  2433687 taatattataagcatt 2433672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 7761983 - 7762055
Alignment:
Q  330 ttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattcta 402  Q
    |||| |||||||| | |||| ||||||||||||| ||||||| || ||| ||| | ||||||| |||||||||    
T  7761983 ttaaaaattcatatttaatttatgttttgctaaaaaattctatttttttgggaaatatttttacaatattcta 7762055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 8525526 - 8525482
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  8525526 aattcatattaaattcatgttttgttaaaaaattctaattttttt 8525482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 9198189 - 9198248
Alignment:
Q  345 aaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatattcta 402  Q
    |||||||||||||| |||| |||| ||||| ||||  ||||||||||||| |||||||||    
T  9198189 aaattcatgttttgttaaaaaattataatttttttttggagaaatttttacaatattcta 9198248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 11603077 - 11603029
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  11603077 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 11603029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 417
Target Start/End: Original strand, 12184823 - 12184895
Alignment:
Q  346 aattcatgttttgctaaacaattctaattcttttgg-agaaatttttataatattctaagcattcccgcaaaa 417  Q
    ||||||||||||| || | |||||||||  |||||| ||| |||||||||||||||||| | |||| ||||||    
T  12184823 aattcatgttttgttagataattctaatatttttgggagagatttttataatattctaaactttcctgcaaaa 12184895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 417
Target Start/End: Original strand, 12429251 - 12429323
Alignment:
Q  346 aattcatgttttgctaaacaattctaattcttttgg-agaaatttttataatattctaagcattcccgcaaaa 417  Q
    ||||||||||||| || | |||||||||  |||||| ||| |||||||||||||||||| | |||| ||||||    
T  12429251 aattcatgttttgttagataattctaatatttttgggagagatttttataatattctaaactttcctgcaaaa 12429323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 494
Target Start/End: Complemental strand, 14395416 - 14395364
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  ||||||||| |||| |||| |||||||||||||||| ||||||    
T  14395416 caaaagtgaagatggaaaattttttaggggctaaaagttgaagaaaattttta 14395364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 17953052 - 17953100
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  17953052 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 17953100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 19164622 - 19164682
Alignment:
Q  297 atgaattgaatatgaatttttacgttttggcgcttaagaattcatactaaattcatgtttt 357  Q
    ||||||| ||||||||||||||  |||||| |||||| |||||||| | |||| |||||||    
T  19164622 atgaattaaatatgaatttttaatttttggtgcttaaaaattcatatttaattaatgtttt 19164682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 20052190 - 20052126
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| ||||  ||||||||| |||| ||| |||  ||||||||||    
T  20052190 aattcatattaaattcatgttttgttaaaagattctaatttttttagagtaatacttataatatt 20052126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 495
Target Start/End: Original strand, 25564093 - 25564121
Alignment:
Q  467 agggactaaaagttgaagaaattttttaa 495  Q
    |||||||||||||||||||||||||||||    
T  25564093 agggactaaaagttgaagaaattttttaa 25564121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 402
Target Start/End: Original strand, 28192592 - 28192700
Alignment:
Q  297 atgaattgaatatgaattttta-cgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaa-ttcttttgg-agaaatttttat 393  Q
    ||||||| ||||||||||||||   |||| ||| |||| |||||||| | |||| |||||||| |||| |||||||| || |||||| ||| |||||||     
T  28192592 atgaattaaatatgaatttttatattttttgcggttaaaaattcatatttaatttatgttttgttaaaaaattctaatttattttggaagagatttttac 28192691  T
Q  394 aatattcta 402  Q
    |||||||||    
T  28192692 aatattcta 28192700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 30025688 - 30025732
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  30025688 aattcatattaaattcatgttttgttaaaaaattctaattatttt 30025732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 484
Target Start/End: Original strand, 30025833 - 30025865
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||| |||||||||||||||||||||||    
T  30025833 gatggaaaatttttaagggactaaaagttgaag 30025865  T

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Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 44724579 - 44724627
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||||| ||||||||||||||||    
T  44724579 agggaccaaaagtgaagatggaaaatttttaaaggactaaaagttgaag 44724627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 40465 - 40390
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||   ||| ||||||||||    
T  40465 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaagaaattttttagagggactaaaacgaaa 40390  T

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Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 26968216 - 26968291
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||   |||||||| |||||||||||||||||||||||||||||||||   ||| ||||||||||    
T  26968216 agggatcaaaagtgaaaatggaaaatttttaagggactaaaagttgaagaaattttttagagggactaaaacgaaa 26968291  T

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Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 495
Target Start/End: Original strand, 13324476 - 13324535
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaa 495  Q
    ||||||||||||||  ||||||||  |||||||||| |||||||||||||||||||||||    
T  13324476 agggatcaaaagtgaagatggaaattttttaagggaataaaagttgaagaaattttttaa 13324535  T

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Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 40443576 - 40443518
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||||||||  ||||||||| |||| |||||| |||||||||||||||||||||    
T  40443576 agggatcaaaagtgaagatggaaaattttttagggaccaaaagttgaagaaatttttta 40443518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 40504753 - 40504695
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||||||||  ||||||||| |||| |||||| |||||||||||||||||||||    
T  40504753 agggatcaaaagtgaagatggaaaattttttagggaccaaaagttgaagaaatttttta 40504695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 34423086 - 34423152
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||||||  || ||| ||||||||||||||||||||    
T  34423086 aattcatattaaattcatgttttgttaaaaaattctaaatttttttaggagaaatttttataatatt 34423152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 507
Target Start/End: Complemental strand, 39146471 - 39146400
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaac 507  Q
    |||||||||||||   |||| ||||||||||  ||||||||||||||||||||||||||   ||||||||||    
T  39146471 agggatcaaaagtaaagatgaaaaacttttagaggactaaaagttgaagaaattttttagagggattaaaac 39146400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 42873884 - 42873826
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    |||||||||||||   |||| |||| |||||||||||||||||||||||||| ||||||    
T  42873884 agggatcaaaagtaaagatgaaaaaattttaagggactaaaagttgaagaaaattttta 42873826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 442 - 507
Target Start/End: Original strand, 30829569 - 30829634
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaac 507  Q
    ||||||||  ||||||||| |||  ||||||||||||||||||||| ||||||| |||| ||||||    
T  30829569 caaaagtgaagatggaaaattttatagggactaaaagttgaagaaaatttttaaaaggactaaaac 30829634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 39007851 - 39007786
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattc-ttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||||||||| |||||||||  || ||||||||||    
T  39007851 aattcatattaaattcatgttttgttaaaaaattctaattctttttggagaggttcttataatatt 39007786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 399
Target Start/End: Original strand, 17158248 - 17158316
Alignment:
Q  332 aagaattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttataatatt 399  Q
    ||||||||||| | ||||||||||||| |||| |||||||| || ||||||||| ||| ||||||||||    
T  17158248 aagaattcatatttaattcatgttttgataaaaaattctaattttttttggagagattcttataatatt 17158316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 400
Target Start/End: Complemental strand, 21971307 - 21971239
Alignment:
Q  332 aagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattc 400  Q
    ||||||||||| | |||| |||||||| |||| |||||||||| ||||||||  ||||||| |||||||    
T  21971307 aagaattcatatttaatttatgttttgttaaaaaattctaatttttttggagtgatttttacaatattc 21971239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 27277665 - 27277617
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  27277665 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaag 27277617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 36450460 - 36450504
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||    
T  36450460 aattcatattaaattcatgttttgttaaacaattctaattttttt 36450504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 511
Target Start/End: Original strand, 2359003 - 2359061
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||  || ||||||| ||||||||||||||| |||||| ||||||||||    
T  2359003 gatggaaaacttttggggaactaaaaattgaagaaatttttt-agaggactaaaacgaaa 2359061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 5475690 - 5475764
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||| ||| ||| |||||||||||||| |||| |||||| ||||||||||    
T  5475690 agggaccaaaagtgaagatggaaaattttttaggaactgaaagttgaagaaatctttt-agaggactaaaacgaaa 5475764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 511
Target Start/End: Original strand, 21391470 - 21391525
Alignment:
Q  456 gaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| |||| ||||||||||||||||||||||||||||   ||| ||||||||||    
T  21391470 gaaaattttttagggactaaaagttgaagaaattttttagagggactaaaacgaaa 21391525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 32347810 - 32347751
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||| |||||||||||||  |||||||||||||   ||||||||| ||||    
T  32347810 gatggaaaacttttgagggactaaaagtcaaagaaattttttagagggattaaaatgaaa 32347751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 36595291 - 36595217
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||| ||   || |||||||||| |||||||||||||||||||| |||||| | | |||||||||||||    
T  36595291 agggatcaaaaatgaaaatagaaaacttttgagggactaaaagttgaagaatttttttta-aagattaaaacgaaa 36595217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 41438097 - 41438034
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt-ggagaaatttttataata 397  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||| ||||| ||| ||||||||    
T  41438097 aattcatattaaattcatgttttgttaaaaaattctaatttttttgggagagattcttataata 41438034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 381
Target Start/End: Original strand, 5475561 - 5475607
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttgg 381  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||||    
T  5475561 aattcatattaaattcatgttttgttaaaaaattctaatttttttgg 5475607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 511
Target Start/End: Original strand, 43640074 - 43640116
Alignment:
Q  469 ggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||   ||||||||||||||    
T  43640074 ggactaaaagttgaagaaattttttagagggattaaaacgaaa 43640116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 9437161 - 9437092
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||  ||| ||||| |||||| |||||||||||||||| ||  |||||| |||| ||||||||||    
T  9437161 caaaagtgaagattgaaaatttttaaaggactaaaagttgaaggaaaattttaaaaggactaaaacgaaa 9437092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 491
Target Start/End: Complemental strand, 14890038 - 14889989
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttt 491  Q
    ||||||||  ||||||||  |||| |||||||||||||||||||||||||    
T  14890038 caaaagtgaagatggaaatttttttagggactaaaagttgaagaaatttt 14889989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 15156809 - 15156736
Alignment:
Q  297 atgaattgaatatgaatttttacg-ttttggcgcttaagaattcatactaaattcatgttttgctaaacaattc 369  Q
    ||||||| |||||||||||||| | |||| |||||||| |||||||| | ||||||| | ||| ||||||||||    
T  15156809 atgaattaaatatgaatttttaagtttttagcgcttaaaaattcatatttaattcatatcttgttaaacaattc 15156736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 400
Target Start/End: Complemental strand, 16064747 - 16064642
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttata 394  Q
    ||||||| ||||| ||||||||  |||| |||||| || |||| ||| | ||||||||||||| |||| |||||||| || ||||||||  ||||||| |    
T  16064747 atgaattaaatataaatttttatatttttggcgctaaacaatttatatttaattcatgttttgttaaaaaattctaattttttttggagtgatttttaca 16064648  T
Q  395 atattc 400  Q
    ||||||    
T  16064647 atattc 16064642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 17548541 - 17548606
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttataatatt 399  Q
    |||||||| |||||||||||| || |||| |||||||| || ||||||||| ||| ||||||||||    
T  17548541 aattcatattaaattcatgttctgttaaaaaattctaattttttttggagagattgttataatatt 17548606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 496
Target Start/End: Original strand, 23390329 - 23390382
Alignment:
Q  443 aaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaag 496  Q
    |||||||  ||||||||| ||||  |||||||||| ||||||||||||||||||    
T  23390329 aaaagtgaagatggaaaattttttggggactaaaaattgaagaaattttttaag 23390382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 494
Target Start/End: Complemental strand, 29134153 - 29134116
Alignment:
Q  457 aaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  29134153 aaaacttttgagggactaaaatttgaagaaatttttta 29134116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 40073552 - 40073475
Alignment:
Q  297 atgaattgaatatgaatttttacgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaatt 374  Q
    ||||||| ||||||||||||||| |||| ||  |||| |||||||| | |||| | |||||| |||| ||||||||||    
T  40073552 atgaattaaatatgaatttttacatttttgcagttaaaaattcatatttaatttaagttttgttaaaaaattctaatt 40073475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 435 - 511
Target Start/End: Original strand, 5192202 - 5192278
Alignment:
Q  435 aagggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||| ||||||||  ||||||||| ||||   |||||||||||||||| ||  |||||  |||||||||||||||    
T  5192202 aagggaccaaaagtgaagatggaaaattttttgaggactaaaagttgaaggaaaattttacaaggattaaaacgaaa 5192278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 11656481 - 11656433
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||| ||||| |||||||||||||||||||||||    
T  11656481 agggaccaaaagtgaagattgaaaatttttaagggactaaaagttgaag 11656433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 11752928 - 11752884
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  11752928 aattcatattaaattcatgttttgttaaaaaattctaattttttt 11752884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 12068099 - 12068143
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||||   ||| ||||||||||    
T  12068099 agggactaaaagttgaagaaattttttagagggactaaaacgaaa 12068143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 12565567 - 12565519
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  12565567 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 12565519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 402
Target Start/End: Complemental strand, 14786760 - 14786653
Alignment:
Q  297 atgaattgaatatgaatttttacgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttata 394  Q
    ||||||| ||||||||||||||  ||||   | |||| |||||||| |||||| |||||||| |||| ||||||||  || ||| ||| | ||||||| |    
T  14786760 atgaatttaatatgaatttttatatttttatggttaaaaattcatattaaatttatgttttgttaaaaaattctaaatttttttgggaaagatttttaca 14786661  T
Q  395 atattcta 402  Q
    ||||||||    
T  14786660 atattcta 14786653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 431
Target Start/End: Complemental strand, 16403337 - 16403201
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattctaat-tcttttggagaaatttttata 394  Q
    ||||||| ||||| || ||||| ||||| ||  ||||| |||||||| | ||||||| ||||| |||||||||| ||| | |||| | || | |||||||    
T  16403337 atgaattaaatattaacttttatgtttttggaacttaaaaattcatatttaattcattttttgttaaacaattcaaatattttttagcgagacttttata 16403238  T
Q  395 atattctaagcattcccgcaaaaactcattcaaaaat 431  Q
    ||||||||| |||||   |||||| | ||||||||||    
T  16403237 atattctaaacattcatacaaaaaattattcaaaaat 16403201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 495
Target Start/End: Original strand, 16872665 - 16872693
Alignment:
Q  467 agggactaaaagttgaagaaattttttaa 495  Q
    |||||||||||||||||||||||||||||    
T  16872665 agggactaaaagttgaagaaattttttaa 16872693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 18910840 - 18910892
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  ||||||||| || | | ||||||||||||||||||||||||||    
T  18910840 caaaagtgaagatggaaaatttgttaaggactaaaagttgaagaaatttttta 18910892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 19437027 - 19436983
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  19437027 aattcatacttaatacatgttttgttaaacaattctaattttttt 19436983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 20579678 - 20579634
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  20579678 aattcatattaaattcatgttttgttaaaaaattctaattttttt 20579634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 21011093 - 21011141
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||| ||||| |||||||||||||||||||||||    
T  21011093 agggaccaaaagtgaagattgaaaatttttaagggactaaaagttgaag 21011141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 22083295 - 22083339
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  22083295 aattcatattaaattcatgttttgttaaaaaattctaattttttt 22083339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 35808344 - 35808296
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||  ||| |||||||||  ||||||||||||||||||    
T  35808344 agggatcaaaagtgaagattgaaaactttatagggactaaaagttgaag 35808296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 43066875 - 43066951
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaat 512  Q
    ||||| ||||||||  ||||||||| |||| |||||||||||||||||| ||  |||||   ||| |||||||||||    
T  43066875 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaaggaaaattttagagggactaaaacgaaat 43066951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 494
Target Start/End: Complemental strand, 45249058 - 45249006
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    |||||||||||| | |||| ||||||| |||||||||| |||||||| |||||    
T  45249058 caaaagtgtggacgaaaaatttttaagagactaaaagtcgaagaaatatttta 45249006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 511
Target Start/End: Complemental strand, 20203811 - 20203752
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||| ||| |||||||||||||||||||||||||  ||| ||||||||||    
T  20203811 gatggaaaacttttgaggaactaaaagttgaagaaattttttaaagggaataaaacgaaa 20203752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 35683440 - 35683365
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  |||| |||| |||| ||||||||||||||||||||||||||||   ||||||||||||||    
T  35683440 agggaccaaaagtgaagatgaaaaattttttagggactaaaagttgaagaaattttttagagggattaaaacgaaa 35683365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 511
Target Start/End: Complemental strand, 34020447 - 34020398
Alignment:
Q  462 ttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  34020447 ttttaagggactaaaagttgaagaaattttttaaatggattaaaatgaaa 34020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 8117297 - 8117249
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  8117297 agggatcaaaagtgaagatggaaaatttttaagggactaaaagttgaag 8117249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 51042632 - 51042680
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  51042632 agggatcaaaagtgaagatggaaaatttttaagggactaaaagttgaag 51042680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 1924169 - 1924094
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| ||||||||||||||||||||||| ||  |||||  |||| ||||||||||    
T  1924169 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaaggaaaattttagaaggactaaaacgaaa 1924094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 8117427 - 8117361
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||  ||||| ||| ||||||||||    
T  8117427 aattcatattaaattcatgttttgttaaacaattctaattttttttgggagacattcttataatatt 8117361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 16071734 - 16071676
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  ||||||||| |||| |||||||||||||| |||||||||||||    
T  16071734 agggaccaaaagtgaagatggaaaatttttgagggactaaaagttaaagaaatttttta 16071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 435 - 484
Target Start/End: Complemental strand, 32800912 - 32800863
Alignment:
Q  435 aagggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    |||||| ||||||||  |||||||||||||| ||||||||||||||||||    
T  32800912 aagggaccaaaagtgaagatggaaaactttttagggactaaaagttgaag 32800863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 35120177 - 35120242
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt-ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||| ||||| ||| ||||||||||    
T  35120177 aattcatattaaattcatgttttgttaaaaaattctaatttttttgggagagattcttataatatt 35120242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 9370068 - 9370020
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||  |||| |||| |||||||||||||||||||||||    
T  9370068 agggatcaaaagtgaagatgaaaaaattttaagggactaaaagttgaag 9370020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 10458994 - 10458946
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  10458994 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaag 10458946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 490
Target Start/End: Complemental strand, 12591258 - 12591210
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattt 490  Q
    ||||||||  |||| ||||||||| ||||||||||||||||||||||||    
T  12591258 caaaagtgaagatgaaaaacttttgagggactaaaagttgaagaaattt 12591210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 24977225 - 24977269
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||||   ||||||||||||||    
T  24977225 agggactaaaagttgaagaaattttttagagggattaaaacgaaa 24977269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 1825808 - 1825874
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  1825808 aattcatattaaattcatgttttgttaaaaaattctaattttttttgggagagattcttataatatt 1825874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 8080318 - 8080252
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||||||  || ||| ||||| ||||||||||||||    
T  8080318 aattcatattaaattcatgttttgttaaaaaattctaaatttttttgggagagatttttataatatt 8080252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 22008079 - 22008004
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||   ||| ||||| |||  ||||||||||||||||||||||||||||   ||| ||||||||||    
T  22008079 agggatcaaaagtagtgattgaaaattttatagggactaaaagttgaagaaattttttagagggactaaaacgaaa 22008004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 26487902 - 26487827
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||  |||| ||| ||||||||||||||||| ||||||  |||||||||| ||||    
T  26487902 agggaccaaaagtgaagatggaaatttttttaggaactaaaagttgaagaaaatttttagaaggattaaaatgaaa 26487827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 30112560 - 30112494
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  30112560 aattcatattaaattcatgttttgttaaaaaattctaatttttttagggagagattcttataatatt 30112494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 32801041 - 32800975
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  32801041 aattcatattaaattcatgttttgttaaaaaattctaattttttttgggagagattcttataatatt 32800975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 494
Target Start/End: Original strand, 44380898 - 44380929
Alignment:
Q  463 tttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||||||||||||||||||||||||||    
T  44380898 tttaagggactaaaagttgaagaaatttttta 44380929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 47805205 - 47805139
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  47805205 aattcatattaaattcatgttttgttaaaaaattctaattatttttaggagagattcttataatatt 47805139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 495
Target Start/End: Complemental strand, 50803301 - 50803258
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaattttttaa 495  Q
    |||| ||||||||| || ||||||||||||||||||||||||||    
T  50803301 gatgaaaaacttttgagagactaaaagttgaagaaattttttaa 50803258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 21454618 - 21454557
Alignment:
Q  346 aattcatgttttgctaaacaattctaattcttttggagaaatttttataatattctaagcatt 408  Q
    ||||||||||||| |||| | ||||| || ||||||||| |||||||||||||||||| ||||    
T  21454618 aattcatgttttgttaaaaagttctattt-ttttggagagatttttataatattctaaacatt 21454557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 25811273 - 25811327
Alignment:
Q  346 aattcatgttttgctaaacaattctaattctttt-ggagaaatttttataatatt 399  Q
    ||||||||||||| |||| |||||||||| |||| ||||||||| ||||||||||    
T  25811273 aattcatgttttggtaaaaaattctaatttttttgggagaaattcttataatatt 25811327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 342
Target Start/End: Original strand, 39669829 - 39669875
Alignment:
Q  296 aatgaattgaatatgaatttttacgttttggcgcttaagaattcata 342  Q
    |||||||| |||||||||||||| ||||| |||||||| ||||||||    
T  39669829 aatgaattaaatatgaatttttaagttttagcgcttaaaaattcata 39669875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 48736466 - 48736524
Alignment:
Q  453 atggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||  |||||| ||||||||||||||||||||||||||   ||| ||||||||||    
T  48736466 atggaaattttttaaaggactaaaagttgaagaaattttttagagggactaaaacgaaa 48736524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 381
Target Start/End: Original strand, 54788879 - 54788925
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttgg 381  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||||    
T  54788879 aattcatattaaattcatgttttgttaaaaaattctaatttttttgg 54788925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 484
Target Start/End: Complemental strand, 8080189 - 8080140
Alignment:
Q  435 aagggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    |||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  8080189 aagggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 8080140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 29965083 - 29965018
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt-ggagaaatttttataatatt 399  Q
    |||||||  ||||||||||||||| |||| |||||||||| |||| ||||| ||| ||||||||||    
T  29965083 aattcattttaaattcatgttttgttaaaaaattctaatttttttgggagagattcttataatatt 29965018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 44569441 - 44569389
Alignment:
Q  346 aattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    ||||||||||||| |||| |||||||| ||||||||||| ||| ||||||||||    
T  44569441 aattcatgttttgttaaaaaattctaa-tcttttggagatattcttataatatt 44569389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 511
Target Start/End: Complemental strand, 46472806 - 46472757
Alignment:
Q  462 ttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||| ||||||||||||||||||||||||||||   ||| ||||||||||    
T  46472806 ttttgagggactaaaagttgaagaaattttttagagggactaaaacgaaa 46472757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 56360270 - 56360335
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttataatatt 399  Q
    |||||||| |||||||||||||| |||||  ||||||| || ||||||||| ||| ||||||||||    
T  56360270 aattcatattaaattcatgttttactaaaagattctaattttttttggagagattcttataatatt 56360335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 1924301 - 1924257
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  1924301 aattcatattaaattcatgttttgttaaaaaattctaattttttt 1924257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 2904842 - 2904798
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  2904842 aattcatattaaattcatgttttgttaaaaaattctaattttttt 2904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 6213122 - 6213166
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  6213122 aattcatattaaattcatgttttgttaaaaaattctaattttttt 6213166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 7111438 - 7111394
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  7111438 aattcatattaaattcatgttttgttaaaaaattctaattttttt 7111394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 494
Target Start/End: Complemental strand, 16946257 - 16946206
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  || |||||||||||  |||||||||||||||||||||||||||    
T  16946257 caaaagtgaagaaggaaaacttttg-gggactaaaagttgaagaaatttttta 16946206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 20943680 - 20943724
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||||   ||| ||||||||||    
T  20943680 agggactaaaagttgaagaaattttttagagggactaaaacgaaa 20943724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 494
Target Start/End: Complemental strand, 22529394 - 22529342
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  |||||||||  ||| | ||||||||||||||||||||||||||    
T  22529394 caaaagtgaagatggaaaaaattttaaggactaaaagttgaagaaatttttta 22529342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 22787160 - 22787208
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  |||| |||| |||||||||||||||||||||||    
T  22787160 agggaccaaaagtgaagatgaaaaaattttaagggactaaaagttgaag 22787208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 400
Target Start/End: Original strand, 23623984 - 23624088
Alignment:
Q  297 atgaattgaatatgaatttttacgt-tttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataa 395  Q
    ||||||| ||||||||||||||  | ||||||| | || |||| ||| | ||||||||||||  |||| |||| ||||| ||||||||  ||||||| ||    
T  23623984 atgaattaaatatgaatttttatatgtttggcggtaaaaaatttatatttaattcatgtttttttaaaaaattttaatttttttggagtgatttttacaa 23624083  T
Q  396 tattc 400  Q
    |||||    
T  23624084 tattc 23624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 25368912 - 25368960
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||| ||||| |||||||||||||||||||||||    
T  25368912 agggaccaaaagtgaagattgaaaatttttaagggactaaaagttgaag 25368960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 511
Target Start/End: Complemental strand, 28424630 - 28424562
Alignment:
Q  443 aaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||  ||||||||| |||  |||||| |||||||||||||||||||||   ||||||||| ||||    
T  28424630 aaaagtgaagatggaaaattttatagggaccaaaagttgaagaaattttttagagggattaaaatgaaa 28424562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 28567853 - 28567809
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  28567853 aattcatattaaattcatgttttgttaaaaaattctaattttttt 28567809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 30188512 - 30188556
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||||   ||| ||||||||||    
T  30188512 agggactaaaagttgaagaaattttttagagggactaaaacgaaa 30188556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 35074958 - 35074914
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||| |||||||  ||| ||||||||||    
T  35074958 agggactaaaagttgaagaaaatttttaaagggactaaaacgaaa 35074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 494
Target Start/End: Complemental strand, 38348534 - 38348482
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  ||||||||| |||| |||  |||||||||||||||||||||||    
T  38348534 caaaagtgaagatggaaaattttttaggagctaaaagttgaagaaatttttta 38348482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 38705061 - 38705109
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  |||| |||| |||||||||||||||||||||||    
T  38705061 agggaccaaaagtgaagatgaaaaaattttaagggactaaaagttgaag 38705109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 39652440 - 39652396
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||||| ||||||||||||| |||| |||||||||| ||||    
T  39652440 aattcatacttaattcatgttttggtaaaaaattctaattttttt 39652396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 43622020 - 43621976
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||||   ||| ||||||||||    
T  43622020 agggactaaaagttgaagaaattttttagagggactaaaacgaaa 43621976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 511
Target Start/End: Complemental strand, 44264165 - 44264125
Alignment:
Q  471 actaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||| |||||||||||||| | |||||||||||||    
T  44264165 actaaaagttaaagaaattttttaaaatgattaaaacgaaa 44264125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 480
Target Start/End: Original strand, 49120507 - 49120551
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagtt 480  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||    
T  49120507 agggaccaaaagtgaagatggaaaatttttaagggactaaaagtt 49120551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 507
Target Start/End: Original strand, 42410647 - 42410698
Alignment:
Q  456 gaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaac 507  Q
    ||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  42410647 gaaaatttttgagggactaaaagttgaagaaattttttaaaaggattaaaac 42410698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 507
Target Start/End: Original strand, 1053459 - 1053530
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaac 507  Q
    ||||||||||||||  |||| ||||  ||| ||| ||||||||||||||||||||||||| | |||||||||    
T  1053459 agggatcaaaagtgaagatgaaaaaaattttaggaactaaaagttgaagaaattttttaaaaagattaaaac 1053530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 34069859 - 34069925
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattcta--attcttttggagaaatttttataatatt 399  Q
    |||||||| |||||||||||||||||||| |||||||  ||| ||||||||| ||| ||||||||||    
T  34069859 aattcatattaaattcatgttttgctaaaaaattctaatatttttttggagagattcttataatatt 34069925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 34069989 - 34070064
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||   |||||||| |||| ||||| ||||||||||||||||||||||  |||| ||||| ||||    
T  34069989 agggatcaaaagtgaaaatggaaaaattttgagggattaaaagttgaagaaattttttagaaggactaaaatgaaa 34070064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 52510628 - 52510731
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataa 395  Q
    ||||||| ||||||||||||||  |||| |||| | || |||||||| | ||||||||||||| |||| ||||||| || ||||||||  ||||||| ||    
T  52510628 atgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattctattttttttggagtgatttttacaa 52510727  T
Q  396 tatt 399  Q
    ||||    
T  52510728 tatt 52510731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 402
Target Start/End: Original strand, 33826179 - 33826285
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataa 395  Q
    ||||||| ||||||||||||||  |||| |||| |||| | |||||| | |||| |||||||| |||| |||||||||| ||||||   | |||||||||    
T  33826179 atgaattaaatatgaatttttatatttttggcggttaaaatttcatatttaatttatgttttgttaaaaaattctaatttttttgggagagtttttataa 33826278  T
Q  396 tattcta 402  Q
    |||||||    
T  33826279 tattcta 33826285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 41901372 - 41901442
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagag-gattaaaacgaaa 511  Q
    ||||||||  ||||||||| ||||||| |||||||||||||||| ||||||||| || || ||||||||||    
T  41901372 caaaagtgaagatggaaaaattttaagagactaaaagttgaagatattttttaaaagagactaaaacgaaa 41901442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 22866689 - 22866636
Alignment:
Q  346 aattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||| |||||||| ||||||||||||||| ||||||||| ||| ||||||||||    
T  22866689 aatttatgttttgttaaacaattctaatttttttggagagattcttataatatt 22866636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 31636857 - 31636804
Alignment:
Q  346 aattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    ||||||||||||| |||| |||||||||| |||| |||| ||||||||||||||    
T  31636857 aattcatgttttgttaaaaaattctaatttttttagagagatttttataatatt 31636804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 511
Target Start/End: Original strand, 39368430 - 39368479
Alignment:
Q  462 ttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||| |||||||||||||||||||||||||||||  ||| ||||||||||    
T  39368430 ttttgagggactaaaagttgaagaaattttttaaagggactaaaacgaaa 39368479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 5964420 - 5964464
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||    
T  5964420 agggactaaaagttgaagaaattttttagaaggattaaaatgaaa 5964464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 20748713 - 20748777
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||| ||||  || ||||||||||    
T  20748713 aattcatattaaattcatgttttgttaaaaaattctaattttttttgagagtttattataatatt 20748777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 21249002 - 21248954
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||  ||||||||| |||| ||||||||||||||||||    
T  21249002 agggatcaaaagtgaagatggaaaattttttagggactaaaagttgaag 21248954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 23800325 - 23800373
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  23800325 agggaccaaaagtgaagatggaaaatttttaagggactaaaagttgaag 23800373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 30280665 - 30280621
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||    
T  30280665 aattcatattaaattcatgttttgttaaacaattctaattttttt 30280621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 538604 - 538529
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||| | |||||||||||||||| || ||||||   ||||||||||||||    
T  538604 agggaccaaaagtgaagatggaaaattttttaaggactaaaagttgaaggaaatttttagagggattaaaacgaaa 538529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 3751461 - 3751386
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  |||| |||| ||||||||||||||||||||||| ||  |||||   ||||||||||||||    
T  3751461 agggaccaaaagtgaagatgaaaaaattttaagggactaaaagttgaaggaaaattttagagggattaaaacgaaa 3751386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 3751591 - 3751525
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||||||  || ||| ||||||||| ||||||||||    
T  3751591 aattcatattaaattcatgttttgttaaaaaattctaaatttttttgggagaaattcttataatatt 3751525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 408
Target Start/End: Complemental strand, 8887609 - 8887538
Alignment:
Q  337 ttcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattctaagcatt 408  Q
    |||||| | ||||||||||||| |||| |||||||||| |||| |||  |||||||| ||||||||| ||||    
T  8887609 ttcatatttaattcatgttttgttaaaaaattctaattttttttgagggatttttatgatattctaatcatt 8887538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 8887609 - 8887675
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattcta 402  Q
    |||||||| | ||||||||||||  | || ||||||||||||||| |||| |||||||||||||||||    
T  8887609 aattcatatttaattcatgttttattgaaaaattctaattctttt-gagagatttttataatattcta 8887675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 43226921 - 43226855
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  43226921 aattcatattaaattcatgttttgttaaaaaattctaatttttttagggagagattcttataatatt 43226855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 47844135 - 47844201
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  47844135 aattcatattaaattcatgttttgttaaaaaattctaatttttttagggagagattcttataatatt 47844201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 30022781 - 30022739
Alignment:
Q  469 ggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||||||||||||||| |||||  |||||||||||||||    
T  30022781 ggactaaaagttgaagaaatattttagaaggattaaaacgaaa 30022739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 494
Target Start/End: Original strand, 33524206 - 33524264
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||||| ||  ||| |||||||||  ||||||||||||||||||||| ||||||    
T  33524206 agggatcaaaaatgaagattgaaaactttatagggactaaaagttgaagaaaattttta 33524264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 494
Target Start/End: Original strand, 37848100 - 37848142
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    |||| |||| ||| |||||||||||||||||||||||||||||    
T  37848100 gatgaaaaattttaaagggactaaaagttgaagaaatttttta 37848142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 43846476 - 43846418
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    |||||||||||||   ||| ||||| |||  ||||||||||||||||||||||||||||    
T  43846476 agggatcaaaagtagtgattgaaaattttatagggactaaaagttgaagaaatttttta 43846418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 48411303 - 48411233
Alignment:
Q  330 ttaagaattcatactaaattcatgttttgctaaacaattctaattc-ttttggagaaatttttataatatt 399  Q
    |||| |||| ||| ||||||||||||||| |||| |||||||| || ||||||||| ||| ||||||||||    
T  48411303 ttaaaaatttatattaaattcatgttttgttaaaaaattctaaatctttttggagagattcttataatatt 48411233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 401
Target Start/End: Original strand, 48411300 - 48411373
Alignment:
Q  330 ttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaa--atttttataatattct 401  Q
    |||| |||||||| ||||||||||||||| |||| |||||||||| || ||| |||  ||||||| ||||||||    
T  48411300 ttaaaaattcatattaaattcatgttttgttaaaaaattctaatttttctggggaaatatttttacaatattct 48411373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 494
Target Start/End: Original strand, 13566329 - 13566370
Alignment:
Q  453 atggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    |||||||| |||| |||||||||||||| |||||||||||||    
T  13566329 atggaaaaatttttagggactaaaagttaaagaaatttttta 13566370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 484
Target Start/End: Original strand, 14420890 - 14420939
Alignment:
Q  435 aagggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    |||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  14420890 aagggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 14420939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 493
Target Start/End: Original strand, 37232759 - 37232796
Alignment:
Q  456 gaaaacttttaagggactaaaagttgaagaaatttttt 493  Q
    |||||||||  |||||||||||||||||||||||||||    
T  37232759 gaaaactttatagggactaaaagttgaagaaatttttt 37232796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 44733880 - 44733815
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt-ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| | |||||||| |||| ||||| ||| ||||||||||    
T  44733880 aattcatattaaattcatgttttgttaaaaagttctaatttttttgggagagattcttataatatt 44733815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 52826786 - 52826721
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattcta-attcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||||| ||| ||||||||  ||| ||||||||||    
T  52826786 aattcatattaaattcatgttttgttaaaaaattctatatttttttggagtgattcttataatatt 52826721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 538735 - 538691
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  538735 aattcatattaaattcatgttttgttaaaaaattctaattttttt 538691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 3536468 - 3536532
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||| || || ||||||||  ||| ||||||||||    
T  3536468 aattcatattaaattcatgttttgttaaaaaattatattttttttggagtgattcttataatatt 3536532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 399
Target Start/End: Complemental strand, 4369425 - 4369362
Alignment:
Q  338 tcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    ||||| ||||||||||||||| |||| |||||| ||| ||||  ||||| ||||||||||||||    
T  4369425 tcatattaaattcatgttttgttaaaaaattcttatttttttagggagagatttttataatatt 4369362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 9003789 - 9003745
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||||||||||||||||  |||| ||||||||||    
T  9003789 agggattaaaagttgaagaaattttttagaaggactaaaacgaaa 9003745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 18302433 - 18302485
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  ||||| ||| |||| |||||||||||||||||||| |||||||    
T  18302433 caaaagtgaagatgggaaatttttgagggactaaaagttgaagaattttttta 18302485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 492
Target Start/End: Original strand, 23488183 - 23488239
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttt 492  Q
    ||||||||||||||  |||||  |||||||  |||||||||||||||||||| ||||    
T  23488183 agggatcaaaagtgaagatggggaacttttgtgggactaaaagttgaagaaaatttt 23488239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 32924630 - 32924678
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||  ||||||||| |||| ||||||| ||||||||||    
T  32924630 agggatcaaaagtgaagatggaaaaattttgagggacttaaagttgaag 32924678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 33417883 - 33417951
Alignment:
Q  443 aaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||||  |||| |||||||||   ||||||||||||||||||||||||||   ||| ||||||||||    
T  33417883 aaaagtgaagatgaaaaacttttggaggactaaaagttgaagaaattttttagagggactaaaacgaaa 33417951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 35367131 - 35367083
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  |||| |||| |||||||||||||||||||||||    
T  35367131 agggaccaaaagtgaagatgaaaaaattttaagggactaaaagttgaag 35367083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 298 - 402
Target Start/End: Original strand, 36566647 - 36566754
Alignment:
Q  298 tgaattgaatatgaatttttacgttttggc-gcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaa--atttttata 394  Q
    |||||| ||||||||||||||  |||| || |||||| |||||||| |  ||| |||||||| |||| |||||||||| ||||  ||||  ||||||| |    
T  36566647 tgaatttaatatgaatttttatatttttgcagcttaaaaattcatattttatttatgttttgttaaaaaattctaattattttttagaaatatttttaca 36566746  T
Q  395 atattcta 402  Q
    ||||||||    
T  36566747 atattcta 36566754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 38213202 - 38213154
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  38213202 agggaccaaaagtgaagatggaaaaatttttagggactaaaagttgaag 38213154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 40434460 - 40434412
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  |||| |||| |||||||||||||||||||||||    
T  40434460 agggaccaaaagtgaagatgcaaaaattttaagggactaaaagttgaag 40434412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 44778785 - 44778837
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  |||| |||| |||||||| ||||||||||||||||| ||||||    
T  44778785 caaaagtgaagatgaaaaaattttaaggaactaaaagttgaagaaaattttta 44778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 45143802 - 45143758
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  45143802 aattcatattaaattcatgttttgttaaaaaattctaattttttt 45143758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 46634789 - 46634745
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  46634789 aattcatattaaattcatgttttgttaaaaaattctaattatttt 46634745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Complemental strand, 46801820 - 46801776
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||||||||||||||||   ||||||||||||||    
T  46801820 agggaataaaagttgaagaaattttttagagggattaaaacgaaa 46801776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 49580191 - 49580147
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  49580191 aattcatattaaattcatgttttgttaaaaaattctaattttttt 49580147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 513
Target Start/End: Original strand, 31480818 - 31480895
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaata 513  Q
    ||||||||||||||  ||||||||| |||||| |||||||||||||||| ||  |||||  |||| ||||||||||||    
T  31480818 agggatcaaaagtgaagatggaaaatttttaaaggactaaaagttgaaggaaaattttagaaggactaaaacgaaata 31480895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 495
Target Start/End: Original strand, 12422969 - 12423028
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaa 495  Q
    ||||| ||||||||  ||||||||| |||| | |||||||||||||||||||||||||||    
T  12422969 agggaccaaaagtgaagatggaaaattttttaaggactaaaagttgaagaaattttttaa 12423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 32436723 - 32436789
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa--ttcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||||||  || ||||||||||||| ||||||||||    
T  32436723 aattcatattaaattcatgttttgttaaaaaattctaatttttttttggagaaattattataatatt 32436789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 402
Target Start/End: Complemental strand, 45864211 - 45864104
Alignment:
Q  297 atgaattgaatatgaattttta-cgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaat-ttttata 394  Q
    ||||||| ||||||||||||||   ||||| || |||| |||||||| | |||| |||||||| |||| |||||||||| |||||||||| | ||||| |    
T  45864211 atgaatttaatatgaatttttatatttttgacggttaaaaattcatatttaatttatgttttgttaaaaaattctaatttttttggagaattgttttaca 45864112  T
Q  395 atattcta 402  Q
    ||||||||    
T  45864111 atattcta 45864104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 19203960 - 19203884
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaa-attttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||||||||  | |||||||||||||||||  ||||||||  ||||||||||||||    
T  19203960 agggaccaaaagtgaagatggaaaacttttgggcgactaaaagttgaagaattttttttaaagggattaaaacgaaa 19203884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 495
Target Start/End: Original strand, 21403566 - 21403621
Alignment:
Q  439 gatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaa 495  Q
    |||||||||||| |||| |||||||||  |||| |||||||||||||||||||||||    
T  21403566 gatcaaaagtgtagatgcaaaacttttt-gggagtaaaagttgaagaaattttttaa 21403621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 494
Target Start/End: Complemental strand, 29127943 - 29127891
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  ||||||||| |||| |||||||||||||||||||| |||||||    
T  29127943 caaaagtgaagatggaaaatttttgagggactaaaagttgaagaattttttta 29127891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 492
Target Start/End: Complemental strand, 30255730 - 30255674
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttt 492  Q
    ||||| ||||||||  ||||||||| |||| ||||| ||||||||||||||||||||    
T  30255730 agggaccaaaagtgaagatggaaaattttttagggattaaaagttgaagaaattttt 30255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 45864194 - 45864258
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||| |||| | ||||| ||||||    
T  45864194 aattcatattaaattcatgttttgttaaaaaattctaatttttttagagagagttttaaaatatt 45864258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 402
Target Start/End: Complemental strand, 46414159 - 46414055
Alignment:
Q  298 tgaattgaatatgaatttttacgttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataata 397  Q
    |||||| ||||||||||||||  ||||   | |||| |||||||| || ||| || ||||| |||| |||||||||| ||||||| | ||||||| ||||    
T  46414159 tgaatttaatatgaatttttatatttttatggttaaaaattcatattagatttatattttgttaaaaaattctaatttttttggaaagatttttacaata 46414060  T
Q  398 ttcta 402  Q
    |||||    
T  46414059 ttcta 46414055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 399
Target Start/End: Original strand, 48154258 - 48154362
Alignment:
Q  297 atgaattgaatatgaatttttacgtttt-ggcgcttaagaattcatactaaattcatgttttgctaaacaattctaa-ttcttttggagaaatttttata 394  Q
    ||||||| ||||||||||||||  |||| |||| | || |||||||| | ||||||||||||| |||| |||||||| || ||||||||  ||||||| |    
T  48154258 atgaattaaatatgaatttttatatttttggcggtaaaaaattcatatttaattcatgttttgttaaaaaattctaattttttttggagtgatttttaca 48154357  T
Q  395 atatt 399  Q
    |||||    
T  48154358 atatt 48154362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 511
Target Start/End: Complemental strand, 1983087 - 1983032
Alignment:
Q  456 gaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| |||| ||||||||||||||||||||||||||||   ||| ||||||||||    
T  1983087 gaaaattttttagggactaaaagttgaagaaattttttagagggactaaaacgaaa 1983032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 2963246 - 2963312
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  2963246 aattcatattaaattcatgttttgttaaaaaattctaattttttttgggagagattcttataatatt 2963312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 19919499 - 19919570
Alignment:
Q  330 ttaagaattcatactaaattcatgttttgctaaacaattctaat-tcttttgg-agaaatttttataatatt 399  Q
    |||| |||||||| ||||||||||||||| |||| ||||||||| | |||||| ||||||| ||||||||||    
T  19919499 ttaaaaattcatattaaattcatgttttgttaaaaaattctaatattttttggaagaaattcttataatatt 19919570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 21832286 - 21832352
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  21832286 aattcatattaaattcatgttttgttaaaaaattctaattatttttgggagagattattataatatt 21832352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 494
Target Start/End: Complemental strand, 22755832 - 22755793
Alignment:
Q  455 ggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  22755832 ggaaaacttttaggggactaaaaattgaagaaatttttta 22755793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 43301599 - 43301524
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  ||||||||| |||| |||||||||||||||||| ||  ||||||  ||| ||||||||||    
T  43301599 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaaggaaaattttaaagggactaaaacgaaa 43301524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 45986890 - 45986956
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||| ||||||||||    
T  45986890 aattcatattaaattcatgttttgttaaaaaattctaattttttttgggagagattattataatatt 45986956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 484
Target Start/End: Complemental strand, 1694500 - 1694458
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||  ||||||||| |||||||||||||||||||||||    
T  1694500 caaaagtgaagatggaaaatttttaagggactaaaagttgaag 1694458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 494
Target Start/End: Complemental strand, 1975975 - 1975933
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||||||  |||| ||||||||||||||||||||||||||||    
T  1975975 gatggaaattttttgagggactaaaagttgaagaaatttttta 1975933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 490
Target Start/End: Complemental strand, 3674314 - 3674260
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattt 490  Q
    ||||| ||||||||  ||||||||| |||| || |||||||||||||||||||||    
T  3674314 agggaccaaaagtgaagatggaaaattttttagagactaaaagttgaagaaattt 3674260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 494
Target Start/End: Complemental strand, 40658215 - 40658173
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    |||| |||||||||||  |||||||||||||||||||||||||    
T  40658215 gatgaaaaacttttaaaagactaaaagttgaagaaatttttta 40658173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 43725822 - 43725888
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattct-aattcttttg-gagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||| |||| ||||| |||||||| ||||||||||    
T  43725822 aattcatattaaattcatgttttgttaaaaaattctaaatttttttgagagaaattcttataatatt 43725888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 33654094 - 33654025
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||  ||||||||  |||| |||||||||||||||||||| |||||||   ||| ||||||||||    
T  33654094 caaaagtgaagatggaaattttttgagggactaaaagttgaagaatttttttagagggactaaaacgaaa 33654025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 511
Target Start/End: Original strand, 34826560 - 34826629
Alignment:
Q  442 caaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||||||  ||| |||||||||  |||||||||||||||||| ||  ||||||  ||||||||||||||    
T  34826560 caaaagtgaagattgaaaactttatagggactaaaagttgaaggaaaattttaaagggattaaaacgaaa 34826629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 372
Target Start/End: Original strand, 41648446 - 41648483
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaa 372  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  41648446 aattcatactaaattcatgttttgttaaaaaattctaa 41648483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 43301729 - 43301680
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggaga 384  Q
    |||||||| ||||||||||||||| |||| |||||||||| |||| ||||    
T  43301729 aattcatattaaattcatgttttgttaaaaaattctaattttttttgaga 43301680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 1983234 - 1983170
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    ||||||||  |||||| ||||||| |||| ||||||| || |||| |||| ||||||||||||||    
T  1983234 aattcatataaaattcttgttttgttaaaaaattctatttttttttgagagatttttataatatt 1983170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 6345521 - 6345569
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||   |||||||| |||| ||||||||||||||||||    
T  6345521 agggatcaaaagtgaaaatggaaaaattttgagggactaaaagttgaag 6345569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 429
Target Start/End: Original strand, 16371811 - 16371918
Alignment:
Q  321 ttttggcgcttaagaattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatattctaagcattcccgcaaaaact 420  Q
    |||||||| |||| |||||||| | |||||| |||||| |||| |||  ||| | |||| ||   ||||||||||||||  ||||||||  |||||||||    
T  16371811 ttttggcgtttaa-aattcatatttaattcaagttttgttaaaaaataataaattttttagactgatttttataatattgaaagcattcttgcaaaaact 16371909  T
Q  421 cattcaaaa 429  Q
    |||||||||    
T  16371910 cattcaaaa 16371918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 494
Target Start/End: Complemental strand, 24463386 - 24463354
Alignment:
Q  462 ttttaagggactaaaagttgaagaaatttttta 494  Q
    |||||||||||| ||||||||||||||||||||    
T  24463386 ttttaagggactgaaagttgaagaaatttttta 24463354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 29372370 - 29372306
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| || | ||||| ||| ||||| ||| ||||||||||    
T  29372370 aattcatattaaattcatgttttgttaaaaaaatataattttttgggagagattcttataatatt 29372306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 402
Target Start/End: Complemental strand, 29654726 - 29654670
Alignment:
Q  346 aattcatgttttgctaaacaattctaattcttttggagaaatttttataatattcta 402  Q
    ||||||||||||| | || |||||||||| ||||||||| |||||||  ||||||||    
T  29654726 aattcatgttttgttgaaaaattctaatttttttggagagatttttacgatattcta 29654670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 32750263 - 32750215
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||| ||||| |||||||||||||||||||||||    
T  32750263 agggaccaaaagtgaagattgaaaatttttaagggactaaaagttgaag 32750215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 456 - 511
Target Start/End: Complemental strand, 33690409 - 33690354
Alignment:
Q  456 gaaaacttttaagggactaaaagttgaagaaatttttta-agaggattaaaacgaaa 511  Q
    ||||| ||||||||| ||||||||||||||| ||||||| ||| |||||||||||||    
T  33690409 gaaaatttttaagggtctaaaagttgaagaatttttttagaga-gattaaaacgaaa 33690354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 34327141 - 34327097
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  34327141 aattcatattaaattcatgttttgttaaaaaattctaattttttt 34327097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 38574951 - 38574999
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||| ||||| |||||||||||||||||||||||    
T  38574951 agggaccaaaagtgaagattgaaaatttttaagggactaaaagttgaag 38574999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 45987020 - 45987068
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  45987020 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 45987068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 494
Target Start/End: Original strand, 48295148 - 48295180
Alignment:
Q  462 ttttaagggactaaaagttgaagaaatttttta 494  Q
    |||| ||||||||||||||||||||||||||||    
T  48295148 ttttgagggactaaaagttgaagaaatttttta 48295180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 37698 - 37632
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt--ggagaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||  ||||| ||||||||||||||    
T  37698 aattcatattaaattcatgttttgttaaaaaattctaattttttttgggagagatttttataatatt 37632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 511
Target Start/End: Original strand, 9373371 - 9373430
Alignment:
Q  452 gatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    |||||| || |||| ||||||||||||||||||||||||||||   ||||||||||||||    
T  9373371 gatggacaattttttagggactaaaagttgaagaaattttttagagggattaaaacgaaa 9373430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 18497571 - 18497513
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||| ||||||||||||||||    
T  18497571 agggaccaaaagtgaagatggaaaatttttgagggactaaaaattgaagaaatttttta 18497513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 21215424 - 21215366
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||||| ||||||    
T  21215424 agggaccaaaagtgaagatggaaaaatttttagggactaaaagttgaagaaaattttta 21215366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 487
Target Start/End: Original strand, 4812806 - 4812858
Alignment:
Q  435 aagggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaa 487  Q
    |||||||||||||||  |||| ||||||||| | |||||||||||||||||||    
T  4812806 aagggatcaaaagtgaagatgaaaaacttttgaaggactaaaagttgaagaaa 4812858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 7575942 - 7576006
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    |||||||| | ||||||||||||| |||| |||||||||| ||||||||  ||||||| ||||||    
T  7575942 aattcatatttaattcatgttttgttaaaaaattctaatttttttggagtgatttttacaatatt 7576006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 399
Target Start/End: Complemental strand, 30579799 - 30579745
Alignment:
Q  344 taaattcatgttttgctaaacaattctaattcttttggagaaatttttataatatt 399  Q
    ||||||||||||||| ||||||||||||||| |||||| || ||| ||||||||||    
T  30579799 taaattcatgttttgttaaacaattctaatttttttgg-gagattcttataatatt 30579745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 11261685 - 11261739
Alignment:
Q  346 aattcatgttttgctaaacaattctaattctttt-ggagaaatttttataatatt 399  Q
    ||||||||||||| |||| |||||||||| |||| ||||||||| ||||||||||    
T  11261685 aattcatgttttgttaaaaaattctaattattttgggagaaattcttataatatt 11261739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 1962622 - 1962687
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattcttttgg-agaaatttttataatatt 399  Q
    |||||||| ||||||||||||||| |||| ||||||||||  ||||| ||| ||| ||||||||||    
T  1962622 aattcatattaaattcatgttttgttaaaaaattctaatttgtttggcagagattattataatatt 1962687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 1092226 - 1092153
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaattttttaagaggattaaaacgaaa 511  Q
    ||||| ||||||||  |||| |||| ||||  |||||||||||| |||||||||||||||  ||| ||||||||||    
T  1092226 agggaccaaaagtgaagatgtaaaattttt--gggactaaaagtcgaagaaattttttaaagggactaaaacgaaa 1092153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 1962751 - 1962799
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  1962751 agggaccaaaagtgaagatggaaaattttttagggactaaaagttgaag 1962799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 10839126 - 10839078
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  |||| |||| |||||||||||||||||||||||    
T  10839126 agggaccaaaagtgaagatgaaaaatttttaagggactaaaagttgaag 10839078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 12264998 - 12264950
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||| ||||| |||||||||||||||||||||||    
T  12264998 agggaccaaaagtgaagattgaaaatttttaagggactaaaagttgaag 12264950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 28580743 - 28580791
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||||||||| |||| ||||||||||||||||||    
T  28580743 agggaccaaaagtgaagatggaaaaatttttagggactaaaagttgaag 28580791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 33684388 - 33684436
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||| ||||| |||||||||||||||||||||||    
T  33684388 agggaccaaaagtgaagattgaaaatttttaagggactaaaagttgaag 33684436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 494
Target Start/End: Original strand, 11194 - 11252
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaagaaatttttta 494  Q
    ||||| ||||||||  |||| ||||||| ||||| |||||||||| |||||||||||||    
T  11194 agggaccaaaagtgaagatgaaaaacttgtaaggaactaaaagttaaagaaatttttta 11252  T

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Target: scaffold0936 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 890 - 846
Alignment:
Q  335 aattcatactaaattcatgttttgctaaacaattctaattctttt 379  Q
    |||||||| ||||||||||||||| |||| |||||||||| ||||    
T  890 aattcatattaaattcatgttttgttaaaaaattctaattttttt 846  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 507
Target Start/End: Original strand, 3001 - 3041
Alignment:
Q  467 agggactaaaagttgaagaaattttttaagaggattaaaac 507  Q
    ||||||||||||||||||||||||||||   ||||||||||    
T  3001 agggactaaaagttgaagaaattttttagagggattaaaac 3041  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 28339 - 28403
Alignment:
Q  336 attcatactaaattcatgttttgctaaacaattct-aattcttttggagaaatttttataatatt 399  Q
    ||||||| ||||||||||||||| |||| |||||| |||| |||||||| |||| || |||||||    
T  28339 attcatattaaattcatgttttgttaaaaaattctaaatttttttggagtaattcttgtaatatt 28403  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 36437 - 36389
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||  ||||||||| |||||||| || |||||||||||    
T  36437 agggatcaaaagtgaagatggaaaatttttaaggaaccaaaagttgaag 36389  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 138746 - 138794
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||| ||||||||  ||| ||||| |||||||||||||||||||||||    
T  138746 agggaccaaaagtgaagattgaaaatttttaagggactaaaagttgaag 138794  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 484
Target Start/End: Original strand, 439908 - 439956
Alignment:
Q  436 agggatcaaaagtgtggatggaaaacttttaagggactaaaagttgaag 484  Q
    ||||||||||||||  ||||||||  |||||| ||||||||||||||||    
T  439908 agggatcaaaagtgacgatggaaattttttaaaggactaaaagttgaag 439956  T

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