View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4694_low_7 (Length: 284)
Name: NF4694_low_7
Description: NF4694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4694_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 10314356 - 10314626
Alignment:
| Q |
1 |
atgtttgccagtggaagtgatgattgttctgtcaaactatggaatatcagcgaggcatgcttctttttatgcattttgattacaaaccataacttaaaac |
100 |
Q |
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| T |
10314356 |
atgtttgccagtggaagtgatgactgttctgtcaaactatggaatatcagcgaggcatgcttctttttatgcattttgattacaaaccataacttaaaac |
10314455 |
T |
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| Q |
101 |
agacttttgatataatctcagaagttattgagaagaataatatgaaaagaaatataactatatgacaggaaggacaattgatgagtagaatgtttatgct |
200 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
10314456 |
agacttttgatataatctcagaagttatgtagaagaataatatgaaaagaaatataactatatgacaggaagga-aattgatgagtagaatgtttatgct |
10314554 |
T |
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| Q |
201 |
tcacaaaaaataatataattatctcataatgctgttgttttttgcagagaaattctataggaaccatgatga |
272 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
10314555 |
tcacaaaaaataatataattatctcataatgctgttgttttttgcagagaaattctataggaaccataatga |
10314626 |
T |
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