View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4695_low_7 (Length: 350)
Name: NF4695_low_7
Description: NF4695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4695_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 20 - 334
Target Start/End: Complemental strand, 26340969 - 26340655
Alignment:
| Q |
20 |
atatgtatacgatatggtggaacgcatggaagtttcaaccgtgttaagtatccatgaaactatcatggattgcaccgtccaccaatattccatgtcatgt |
119 |
Q |
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| T |
26340969 |
atatgtatacgatatggtggaacgcacggaaggttcaaccgtgttaagtatccatgaaactatcatggattgcaccgtccaccaatcttccatgtcatgt |
26340870 |
T |
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| Q |
120 |
gagttttctgcaggttttgggatgcttccttctattaatccccattttctctgcgcacataacaaatttttcatggcacgagccgattcatcctagtttt |
219 |
Q |
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| T |
26340869 |
gagttttctgcaggttttgggatgattccttctattaatccccattctctctgcgcacgtaacaaatttttcatggcacgagccgattcatcgtagtttt |
26340770 |
T |
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| Q |
220 |
cgcctcgaagttgaacttaagttattatgttacctggattgtcgtagttgttcaagtcataaggagacaccattatgtttccttgacttgaagagacttc |
319 |
Q |
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| T |
26340769 |
cgtctcgaagttgaacttaagttattatgtttcctggattgccattgttgttcaagtcttaagaagacactattttgtttccttgacttgaagagacttc |
26340670 |
T |
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| Q |
320 |
caattttttcttttc |
334 |
Q |
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||||| |||||||| |
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| T |
26340669 |
caattccttcttttc |
26340655 |
T |
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