View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4696_low_15 (Length: 246)
Name: NF4696_low_15
Description: NF4696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4696_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 33076910 - 33077129
Alignment:
| Q |
1 |
tatctgtttatcaaaaacatcagataaaatgttattaaataacttctatatgatatttgatgtctgnnnnnnnnattaaataataaatcttgaactagta |
100 |
Q |
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| T |
33076910 |
tatctgtttatcaaaaacatcagataaaatgttattaaataacttctatataatatttgatgtctgttttttttattaaataataaatcttgaactagta |
33077009 |
T |
|
| Q |
101 |
ttgataaattatatatacaataaacatacatgcttatgtaagaattgatagtcaactgaacatgtatatataaattaggcatgctttattttgtttgctc |
200 |
Q |
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||||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| | |||| ||||| ||||||||||||||||||||||| |
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| T |
33077010 |
ttgataaattatata--cagtaaacatacatacttatgtaagaattgatagtcaaatgaacatttgtataaaaatttggcatgctttattttgtttgctc |
33077107 |
T |
|
| Q |
201 |
tataaaactaaaaactcgatgt |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
33077108 |
tataaaactaaaaactcgatgt |
33077129 |
T |
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