View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4697_high_6 (Length: 236)
Name: NF4697_high_6
Description: NF4697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4697_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 38423365 - 38423171
Alignment:
| Q |
28 |
ccaatcaatcccactacttcaatgtttaaaacttctccatcaagttcaaaccaccaaacatgaccatattatgaggattatttattattcataaataaaa |
127 |
Q |
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| T |
38423365 |
ccaatcaatcccactacttcaatgtttaaaacttctccatcaagttcaaaccaccaaacatgaccatattatgaggattatttattattcataaataaaa |
38423266 |
T |
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| Q |
128 |
cacttgtttttcaactatattcctaattttctttttctctatcccattnnnnnnnccttgagtactaagaaaagccaacgtggaaccttcctttt |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
38423265 |
cacttgtttttcaactatattcctaattttctttttctctatcccattaaaaaaaccttgagtactaagaaaagccaacgtggaaccttcctttt |
38423171 |
T |
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