View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4698-Insertion-3 (Length: 998)

Name: NF4698-Insertion-3
Description: NF4698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4698-Insertion-3
NF4698-Insertion-3
[»] chr5 (40 HSPs)
chr5 (8-990)||(2211274-2212238)
chr5 (8-790)||(2198791-2199570)
chr5 (803-986)||(35040861-35041045)
chr5 (801-984)||(35781642-35781825)
chr5 (787-986)||(38184152-38184351)
chr5 (787-986)||(38214006-38214205)
chr5 (796-986)||(1349524-1349716)
chr5 (819-982)||(35040047-35040211)
chr5 (786-986)||(5249210-5249410)
chr5 (801-916)||(35041621-35041738)
chr5 (801-986)||(40591185-40591375)
chr5 (808-986)||(4727888-4728068)
chr5 (810-986)||(5246398-5246574)
chr5 (801-916)||(20515390-20515507)
chr5 (801-915)||(36197553-36197669)
chr5 (801-986)||(28793877-28794062)
chr5 (801-916)||(35041402-35041519)
chr5 (814-986)||(19134645-19134820)
chr5 (802-914)||(34383255-34383369)
chr5 (801-938)||(35041234-35041373)
chr5 (801-986)||(35040438-35040611)
chr5 (802-913)||(6538136-6538249)
chr5 (801-869)||(35041908-35041976)
chr5 (801-902)||(30054584-30054686)
chr5 (801-905)||(17367607-17367713)
chr5 (801-986)||(35781257-35781429)
chr5 (803-902)||(6429606-6429707)
chr5 (801-863)||(25458332-25458394)
chr5 (801-869)||(38494368-38494436)
chr5 (801-853)||(18585569-18585621)
chr5 (807-869)||(27124250-27124312)
chr5 (802-876)||(19950609-19950683)
chr5 (801-853)||(17342370-17342423)
chr5 (933-994)||(18585688-18585748)
chr5 (801-853)||(12546040-12546092)
chr5 (811-868)||(19170418-19170475)
chr5 (801-858)||(25095740-25095797)
chr5 (801-858)||(25153710-25153767)
chr5 (832-876)||(35038923-35038968)
chr5 (934-986)||(43582984-43583033)
[»] chr1 (50 HSPs)
chr1 (801-986)||(6844336-6844522)
chr1 (801-989)||(33674853-33675042)
chr1 (801-986)||(43325989-43326175)
chr1 (801-982)||(33240953-33241134)
chr1 (801-986)||(24686063-24686252)
chr1 (803-948)||(10065983-10066131)
chr1 (801-986)||(11981586-11981771)
chr1 (812-986)||(17054112-17054286)
chr1 (791-986)||(6614293-6614488)
chr1 (804-986)||(43114991-43115173)
chr1 (801-986)||(45807860-45808041)
chr1 (801-986)||(47795466-47795651)
chr1 (801-986)||(47795809-47795995)
chr1 (801-953)||(52404239-52404394)
chr1 (801-953)||(47794658-47794812)
chr1 (801-902)||(33813376-33813479)
chr1 (801-902)||(33872846-33872949)
chr1 (801-902)||(47793195-47793298)
chr1 (814-986)||(6318792-6318968)
chr1 (801-986)||(49243654-49243838)
chr1 (807-952)||(42429472-42429620)
chr1 (824-986)||(48738391-48738554)
chr1 (801-870)||(10338307-10338376)
chr1 (801-916)||(39842667-39842783)
chr1 (801-853)||(42834765-42834817)
chr1 (805-915)||(46675797-46675909)
chr1 (801-853)||(43114633-43114685)
chr1 (802-854)||(47795749-47795801)
chr1 (797-902)||(47882181-47882289)
chr1 (801-855)||(47795658-47795712)
chr1 (801-849)||(6941241-6941289)
chr1 (801-853)||(49480392-49480444)
chr1 (804-953)||(6941665-6941809)
chr1 (801-869)||(6319170-6319238)
chr1 (801-849)||(11335820-11335868)
chr1 (801-849)||(11493839-11493887)
chr1 (801-853)||(47796643-47796695)
chr1 (806-853)||(26271825-26271872)
chr1 (803-853)||(45296923-45296973)
chr1 (849-986)||(47795089-47795226)
chr1 (816-853)||(7562023-7562060)
chr1 (803-868)||(8298421-8298486)
chr1 (827-861)||(29300848-29300882)
chr1 (811-876)||(35187751-35187816)
chr1 (856-986)||(47796215-47796347)
chr1 (801-869)||(47796702-47796769)
chr1 (873-986)||(6318694-6318809)
chr1 (801-832)||(12016775-12016806)
chr1 (885-952)||(12016801-12016868)
chr1 (924-986)||(45296802-45296864)
[»] chr8 (53 HSPs)
chr8 (802-986)||(35308168-35308355)
chr8 (801-986)||(6007546-6007732)
chr8 (801-986)||(15199604-15199790)
chr8 (801-982)||(5764755-5764937)
chr8 (801-986)||(13916412-13916593)
chr8 (801-915)||(1153766-1153882)
chr8 (801-986)||(17073011-17073198)
chr8 (801-986)||(17575072-17575259)
chr8 (802-986)||(342712-342897)
chr8 (801-915)||(27882551-27882667)
chr8 (801-915)||(28022731-28022847)
chr8 (801-986)||(40737293-40737486)
chr8 (806-915)||(24981386-24981497)
chr8 (836-953)||(28828096-28828215)
chr8 (804-914)||(339730-339842)
chr8 (801-869)||(4443849-4443917)
chr8 (812-983)||(27964698-27964872)
chr8 (840-986)||(1030294-1030441)
chr8 (801-913)||(11464593-11464707)
chr8 (811-989)||(28022256-28022423)
chr8 (801-876)||(27965810-27965885)
chr8 (802-853)||(5424638-5424689)
chr8 (811-989)||(27882075-27882243)
chr8 (853-986)||(5424697-5424832)
chr8 (801-953)||(32795259-32795411)
chr8 (801-986)||(27917424-27917596)
chr8 (801-986)||(27963843-27964015)
chr8 (853-986)||(6007955-6008089)
chr8 (801-855)||(35102735-35102789)
chr8 (884-986)||(27881272-27881373)
chr8 (884-986)||(28021453-28021554)
chr8 (801-857)||(27881201-27881257)
chr8 (801-857)||(28021382-28021438)
chr8 (801-853)||(33489493-33489545)
chr8 (813-856)||(5424259-5424302)
chr8 (820-875)||(18969454-18969509)
chr8 (593-659)||(41931049-41931115)
chr8 (811-913)||(7284925-7285033)
chr8 (820-876)||(18947029-18947085)
chr8 (808-844)||(28828531-28828567)
chr8 (805-853)||(40796333-40796381)
chr8 (802-849)||(45045540-45045587)
chr8 (801-839)||(5765544-5765582)
chr8 (805-855)||(6007489-6007539)
chr8 (809-851)||(17072756-17072798)
chr8 (809-851)||(17575473-17575515)
chr8 (881-985)||(5424521-5424622)
chr8 (249-300)||(41933502-41933553)
chr8 (588-662)||(1310124-1310198)
chr8 (853-950)||(5765438-5765537)
chr8 (924-953)||(4443963-4443992)
chr8 (813-846)||(28152350-28152383)
chr8 (802-855)||(44964241-44964293)
[»] chr4 (51 HSPs)
chr4 (801-986)||(7238923-7239109)
chr4 (801-986)||(54175710-54175895)
chr4 (801-986)||(27838995-27839182)
chr4 (801-953)||(9518898-9519053)
chr4 (801-986)||(19298548-19298736)
chr4 (801-989)||(41692308-41692497)
chr4 (801-953)||(43495700-43495854)
chr4 (801-989)||(2494107-2494297)
chr4 (801-899)||(36638694-36638793)
chr4 (801-986)||(12928425-12928611)
chr4 (801-953)||(660043-660197)
chr4 (801-916)||(54806949-54807066)
chr4 (801-986)||(49897386-49897570)
chr4 (801-916)||(5029076-5029193)
chr4 (801-904)||(32500136-32500241)
chr4 (801-900)||(39136150-39136251)
chr4 (801-876)||(16877054-16877129)
chr4 (801-986)||(36889705-36889891)
chr4 (801-913)||(49866980-49867094)
chr4 (801-876)||(7070622-7070697)
chr4 (812-902)||(45032320-45032412)
chr4 (802-876)||(53140136-53140209)
chr4 (807-913)||(39476299-39476405)
chr4 (801-853)||(660466-660518)
chr4 (801-853)||(13222071-13222123)
chr4 (801-853)||(24739219-24739271)
chr4 (801-857)||(29100711-29100767)
chr4 (801-869)||(42746904-42746968)
chr4 (802-853)||(42816128-42816179)
chr4 (801-853)||(16435943-16435995)
chr4 (805-853)||(41103892-41103940)
chr4 (818-974)||(42314466-42314626)
chr4 (858-953)||(24739131-24739228)
chr4 (801-857)||(44886061-44886117)
chr4 (810-853)||(50715573-50715616)
chr4 (831-869)||(31837767-31837805)
chr4 (800-857)||(46255090-46255145)
chr4 (928-986)||(53130887-53130944)
chr4 (801-857)||(42881922-42881979)
chr4 (804-863)||(2494726-2494785)
chr4 (801-854)||(27271672-27271726)
chr4 (810-876)||(40796239-40796305)
chr4 (812-853)||(11125146-11125187)
chr4 (802-871)||(17554896-17554964)
chr4 (858-986)||(50715607-50715737)
chr4 (820-876)||(37813189-37813244)
chr4 (886-953)||(29100784-29100851)
chr4 (924-986)||(44886171-44886233)
chr4 (807-876)||(53130984-53131054)
chr4 (580-649)||(4145259-4145328)
chr4 (803-836)||(28450674-28450707)
[»] chr6 (18 HSPs)
chr6 (801-913)||(7204909-7205023)
chr6 (801-986)||(21980782-21980968)
chr6 (819-986)||(2258733-2258901)
chr6 (801-986)||(26001281-26001463)
chr6 (809-990)||(14094086-14094265)
chr6 (796-986)||(33438534-33438724)
chr6 (840-953)||(3307407-3307522)
chr6 (796-953)||(20469387-20469532)
chr6 (812-900)||(21091898-21091987)
chr6 (801-855)||(24007044-24007098)
chr6 (804-847)||(891149-891192)
chr6 (800-853)||(10780321-10780374)
chr6 (805-876)||(22533591-22533662)
chr6 (811-853)||(26209020-26209062)
chr6 (612-651)||(5730197-5730236)
chr6 (811-876)||(8116346-8116412)
chr6 (830-876)||(26277588-26277634)
chr6 (817-850)||(5678842-5678875)
[»] chr3 (44 HSPs)
chr3 (802-986)||(21388446-21388631)
chr3 (801-986)||(54356143-54356330)
chr3 (801-986)||(7433626-7433812)
chr3 (801-986)||(8707893-8708079)
chr3 (801-986)||(9059780-9059966)
chr3 (801-983)||(24485623-24485807)
chr3 (801-953)||(34795099-34795252)
chr3 (801-986)||(10332975-10333162)
chr3 (801-950)||(26863088-26863239)
chr3 (813-986)||(26167913-26168088)
chr3 (801-989)||(40285066-40285254)
chr3 (801-986)||(11632938-11633125)
chr3 (801-986)||(3942604-3942787)
chr3 (806-989)||(26760446-26760629)
chr3 (801-913)||(12100937-12101051)
chr3 (796-986)||(21459481-21459675)
chr3 (801-915)||(16106122-16106238)
chr3 (801-902)||(23027649-23027752)
chr3 (801-902)||(44869071-44869174)
chr3 (818-915)||(47567855-47567954)
chr3 (801-877)||(44077886-44077962)
chr3 (813-986)||(45585980-45586161)
chr3 (801-863)||(10296972-10297034)
chr3 (818-915)||(30917638-30917737)
chr3 (801-853)||(54142889-54142941)
chr3 (801-868)||(10332856-10332923)
chr3 (853-953)||(54981664-54981766)
chr3 (801-914)||(23027884-23027990)
chr3 (801-876)||(25250443-25250518)
chr3 (801-863)||(10309608-10309670)
chr3 (857-986)||(54981819-54981948)
chr3 (802-847)||(33832703-33832748)
chr3 (924-986)||(24842508-24842568)
chr3 (806-844)||(46514887-46514925)
chr3 (934-986)||(10297423-10297474)
chr3 (820-876)||(14900476-14900532)
chr3 (801-852)||(23302073-23302124)
chr3 (935-989)||(33832809-33832862)
chr3 (804-850)||(40459863-40459909)
chr3 (925-983)||(42583594-42583651)
chr3 (928-989)||(3789734-3789794)
chr3 (924-953)||(10297266-10297295)
chr3 (802-835)||(30498613-30498646)
chr3 (801-850)||(42583484-42583533)
[»] chr7 (60 HSPs)
chr7 (790-953)||(44434747-44434912)
chr7 (796-986)||(24689209-24689401)
chr7 (801-986)||(33858029-33858216)
chr7 (801-986)||(21696825-21697010)
chr7 (801-904)||(1644408-1644513)
chr7 (801-876)||(47222651-47222726)
chr7 (801-986)||(4399534-4399720)
chr7 (788-989)||(23808963-23809165)
chr7 (802-912)||(26970594-26970707)
chr7 (801-902)||(15640242-15640345)
chr7 (840-986)||(26246660-26246807)
chr7 (849-986)||(5801076-5801215)
chr7 (801-867)||(22644703-22644769)
chr7 (801-953)||(35526354-35526505)
chr7 (801-916)||(28974816-28974933)
chr7 (801-916)||(15641094-15641211)
chr7 (801-986)||(30121950-30122122)
chr7 (811-953)||(45447644-45447787)
chr7 (801-867)||(29102551-29102617)
chr7 (807-914)||(37986099-37986206)
chr7 (810-981)||(14312497-14312667)
chr7 (801-853)||(35223674-35223726)
chr7 (801-876)||(30122259-30122334)
chr7 (806-876)||(19611022-19611091)
chr7 (801-986)||(23640789-23640960)
chr7 (801-951)||(10282547-10282685)
chr7 (801-986)||(24162207-24162379)
chr7 (811-870)||(10282829-10282888)
chr7 (801-876)||(26178172-26178247)
chr7 (810-876)||(12216852-12216918)
chr7 (801-855)||(15640424-15640478)
chr7 (796-853)||(11485838-11485895)
chr7 (801-856)||(1644768-1644823)
chr7 (853-986)||(24688820-24688954)
chr7 (843-938)||(24689614-24689711)
chr7 (801-868)||(35526765-35526833)
chr7 (802-852)||(4594660-4594710)
chr7 (803-853)||(32988467-32988517)
chr7 (924-986)||(38319943-38320004)
chr7 (588-662)||(38622872-38622946)
chr7 (801-912)||(26151279-26151391)
chr7 (812-853)||(38319868-38319909)
chr7 (802-900)||(26127835-26127935)
chr7 (805-857)||(29854560-29854612)
chr7 (801-853)||(31277316-31277368)
chr7 (809-876)||(10282986-10283053)
chr7 (882-953)||(11485913-11485984)
chr7 (924-986)||(26970448-26970509)
chr7 (924-986)||(40261908-40261969)
chr7 (924-986)||(47222571-47222633)
chr7 (805-842)||(1067210-1067247)
chr7 (816-911)||(11749931-11750027)
chr7 (820-872)||(16174944-16174996)
chr7 (844-876)||(40261848-40261880)
chr7 (928-986)||(21696475-21696531)
chr7 (806-916)||(38087815-38087924)
chr7 (924-986)||(10283333-10283394)
chr7 (802-844)||(15641659-15641701)
chr7 (813-876)||(29834466-29834531)
chr7 (804-842)||(35527349-35527387)
[»] chr2 (42 HSPs)
chr2 (801-989)||(14787075-14787265)
chr2 (801-945)||(31667387-31667533)
chr2 (796-914)||(24545734-24545854)
chr2 (802-986)||(42676341-42676526)
chr2 (801-986)||(21479281-21479468)
chr2 (801-986)||(15458820-15459007)
chr2 (801-901)||(34454000-34454102)
chr2 (796-914)||(36950433-36950553)
chr2 (801-986)||(9420132-9420319)
chr2 (801-876)||(38722726-38722801)
chr2 (801-952)||(37201527-37201679)
chr2 (801-876)||(30620480-30620555)
chr2 (801-876)||(30623101-30623176)
chr2 (809-871)||(43004795-43004857)
chr2 (824-974)||(3255999-3256151)
chr2 (801-985)||(7495474-7495644)
chr2 (796-853)||(21479091-21479148)
chr2 (802-867)||(43968330-43968394)
chr2 (801-876)||(11667078-11667153)
chr2 (796-857)||(41347450-41347511)
chr2 (801-986)||(40662782-40662953)
chr2 (801-853)||(30668785-30668837)
chr2 (801-853)||(39844362-39844414)
chr2 (801-853)||(43968711-43968763)
chr2 (802-853)||(30666203-30666254)
chr2 (801-851)||(645370-645420)
chr2 (801-846)||(40662982-40663027)
chr2 (801-876)||(18297032-18297107)
chr2 (801-869)||(34453627-34453695)
chr2 (801-860)||(9977794-9977853)
chr2 (833-876)||(30632162-30632205)
chr2 (801-855)||(27719809-27719863)
chr2 (928-986)||(43968240-43968297)
chr2 (811-853)||(44833304-44833346)
chr2 (796-853)||(7075043-7075100)
chr2 (858-986)||(7074923-7075052)
chr2 (936-989)||(30632215-30632267)
chr2 (801-846)||(40663055-40663099)
chr2 (829-876)||(559415-559462)
chr2 (587-662)||(28804329-28804404)
chr2 (801-831)||(932767-932797)
chr2 (788-854)||(35125253-35125319)
[»] scaffold0016 (3 HSPs)
scaffold0016 (796-986)||(205116-205305)
scaffold0016 (858-986)||(106104-106233)
scaffold0016 (801-853)||(106224-106275)
[»] scaffold0006 (1 HSPs)
scaffold0006 (801-902)||(71483-71586)
[»] scaffold0224 (1 HSPs)
scaffold0224 (801-853)||(21846-21898)
[»] scaffold0376 (1 HSPs)
scaffold0376 (852-914)||(2046-2110)
[»] scaffold0283 (1 HSPs)
scaffold0283 (802-855)||(10375-10427)


Alignment Details
Target: chr5 (Bit Score: 814; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 814; E-Value: 0
Query Start/End: Original strand, 8 - 990
Target Start/End: Complemental strand, 2212238 - 2211274
Alignment:
Q  8 atctgaagctaccaattgcatgaaaccacacaattttaacattgcacgtcaatgctgattgtagatattaaataatgaacaacccaacatgtacagagaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2212238 atctgaagctaccaattgcatgaaaccacacaattttaacattgcacgtcaatgctgattgtagatattaaataatgaacaacccaacatgtacagagaa 2212139  T
Q  108 tccaagaatttgaataacatacaaagaagaaaatgctattaaaataaccaaaaacaaaacaagggttcattttctggtaatcaagagaagagacagaaga 207  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2212138 tccaagaatttgaaaaacatacaaagaagaaaatgctattaaaataaccaaaaacaaaacaaggtttcattttctggtaatcaagagaagagacagaaga 2212039  T
Q  208 cttacttctccataaccacagctgcggatagaatttccgactttgatcaccatgtcatatacttctttgtaagtttgccacttgtacttgccatgctgtt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2212038 cttacttctccataaccacagctgcggatagaatttccgactttgatcaccatgtcatatacttctttgtatgtttgccacttgtacttgccatgctgtt 2211939  T
Q  308 aagtgtaataataacatgcgagcatttaaataagtcaaaatccatgaccagtcaagctatggcatgaaaatttccaaaaatgaaaaattaaagatttata 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2211938 aagtgtaataataacatgcgagcatttaaataagtcaaaatccatgaccagtcaagctatggcatgaaaatttccaaaaataaaaaattaaagatttata 2211839  T
Q  408 cagtaaccaagactttaccttcccgtccacaatctctcggctaccaagcataggattatttggatatttctcaacagacaatctgtaaaagcactgatac 507  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2211838 cagtaaccaatactttaccttcccgtccacaatctctcggctaccaagcataggattatttggatatttctcaacagacaatctgtaaaagcactgatac 2211739  T
Q  508 aattagaactgaaacgattaatttcttatcaatacaggtccaaatttttgctagtgttgttaaaaagcagaactatagtatagcagaatttgaagaaata 607  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2211738 aattagaactgaaacgactaatttcttatcaatacaggtccaaatttttgctagtgttgttaaaaagcaaaactatagtatagcagaatttgaagaaata 2211639  T
Q  608 ggtattgttccatgataagctattt---attacaaaatcttgtcaaacagcggctatacgacgttatagcagaatttaaaaaacctctatttgtcgcgat 704  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||||    
T  2211638 ggtattgttccatgataagctatttattattacaaaatcttgtcaaacagcggctatacgacgttataacag---------aacctctatttgtcgcgat 2211548  T
Q  705 ctgcacatacaacacttattttcttttaacattaacttaaactgaagtaatacatgacttatacttagtccaaaatcgagccaaaattaaaggctggttt 804  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2211547 ctgcacatacaacacttattttcttttaacattaacttaaactgaagtaatacatgacttatacttagtccaaaatcgagccaaaattaaaggctggttt 2211448  T
Q  805 gttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttac----gtttgtt 898  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    |||||||    
T  2211447 gttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttacgtttgtttgtt 2211348  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaattt 990  Q
    |||||||                  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2211347 taccgta-----------------taaacaaataatttagtttgtttggatacaaacttataaaag-agattttttgttacaaaattaattt 2211274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 511; E-Value: 0
Query Start/End: Original strand, 8 - 790
Target Start/End: Complemental strand, 2199570 - 2198791
Alignment:
Q  8 atctgaagctaccaattgcatgaaaccacacaattttaacattgcacgtcaatgctgattgtagatattaaataatgaacaacccaacatgtacagagaa 107  Q
    |||| ||||| |||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  2199570 atctcaagctgccaattgcatgaaaccacacaaatttggcattgcacgtcaatgctgattgtaaatattaaataatgatcaacccaacatgtacagagaa 2199471  T
Q  108 tccaagaatttgaataacatacaaagaagaaaatgctattaaaataaccaaaaacaaaacaagggttcattttctggtaatcaagagaagagacagaaga 207  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||    
T  2199470 tccaagaatttgaatatcatacaaagaagaaaatgctattaaaataaccaaaaacaaaacaaggtttcattttctggtaatcaagagaagaaacgtaaga 2199371  T
Q  208 cttacttctccataaccacagctgcggatagaatttccgactttgatcaccatgtcatatacttctttgtaagtttgccacttgtacttgccatgctgtt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2199370 cttacttctccataaccacagctgcggatagaatttccgactttgatcaccatgtcatatacttctttgtaagtttgccacttgtacttgccatgctgtt 2199271  T
Q  308 aagtgtaataataacatgcgagcatttaaat-aagtcaaaatccatgaccagtcaagctatggcatgaaaatttccaaaaatgaaaaattaaagatttat 406  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||||||| || ||||||||||| | ||||||||||||| || |    | ||||||||    
T  2199270 aagtgtaataataacatgtgagcatttaaataaagtc-aaatccatgaccggttaagctatggcaaggaaatttccaaaaa-gaca----agagatttat 2199177  T
Q  407 acagtaaccaagactttaccttcccgtccacaatctctcggctaccaagcataggattatttggatatttctcaacagacaatctgtaaaagcactgata 506  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2199176 acagtaaccaagactttaccttcccatccacaatctctcggctaccaagcataggattatttggatatttctcaacagacaatctgtaaaagcactgata 2199077  T
Q  507 caattagaactgaaacgattaatttcttatcaatacaggtccaaatttttgctagtgttgttaaaaagcagaactatagtatagcagaatttgaagaaat 606  Q
    |||| ||||||||||||  |||| |||||| |||||| ||||||||||||||||||||||||||||||| |||| | |||||| ||||||| ||||||||    
T  2199076 caatcagaactgaaacggctaatgtcttattaatacatgtccaaatttttgctagtgttgttaaaaagcggaacaacagtataacagaattcgaagaaat 2198977  T
Q  607 aggtattgttccatgataagctatttattacaaaatcttgtcaaacagcggctatacgacgttatagcagaatttaaa-aaacctctatttgtcgcga-- 703  Q
    || ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||| |||||| ||||||| ||||      
T  2198976 agttattgtttcataataagctatttattacaaaatcttgtcaaatagcggctatactatgttataacagaatttaaacaaacctttatttgtggcgaac 2198877  T
Q  704 tctgcacatacaacacttattttcttttaacattaacttaaactgaagtaatacatgacttatacttagtccaaaatcgagccaaaa 790  Q
    | ||   | ||||||| ||||||||||||||| ||||| ||| |||||||| |||||||| ||| ||||||||||||||| ||||||    
T  2198876 tgtgataaaacaacacatattttcttttaaca-taactaaaaatgaagtaacacatgactcatatttagtccaaaatcgatccaaaa 2198791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 803 - 986
Target Start/End: Original strand, 35040861 - 35041045
Alignment:
Q  803 ttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgttta 900  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  35040861 ttgttacagattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgttta 35040960  T
Q  901 ccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||| ||||||||||       ||||||||||| ||||||||| ||||||||   |||||| | ||||||| |||||||||||||    
T  35040961 ccgtaataaaaatcacttttttaaaacaaataatctagtttgttaggatacaactatataaatg-agattttatgttacaaaatta 35041045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 801 - 984
Target Start/End: Complemental strand, 35781825 - 35781642
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| ||||||||||||||||||    
T  35781825 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagaggttttgtgaaaaatcagaatctattttacgtttgtt 35781726  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaat 984  Q
    |||||||  |||||||||       |||||||||||||||||||||| |||||||   ||||||||  ||||||||||||||||||    
T  35781725 taccgtaacaaaaatcac-ttttttaaacaaataatttagtttgttttgatacaactatataaaag-ggattttttgttacaaaat 35781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 787 - 986
Target Start/End: Original strand, 38184152 - 38184351
Alignment:
Q  787 aaaattaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atct 884  Q
    |||||||| |||  |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || |    
T  38184152 aaaattaagggcccgtttgttacgaaataaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaattagaattt 38184251  T
Q  885 attttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaat 984  Q
    ||||| |||||||||||| ||  |||||||||       |||||||||||||||||||||||| |||||   ||||||||  ||||||||||||||||||    
T  38184252 attttccgtttgtttaccataagaaaaatcacttttttaaaacaaataatttagtttgtttgggtacaactatataaaag--gattttttgttacaaaat 38184349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 787 - 986
Target Start/End: Complemental strand, 38214205 - 38214006
Alignment:
Q  787 aaaattaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atct 884  Q
    |||||||| |||  |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || |    
T  38214205 aaaattaagggcccgtttgttacgaaataaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaattagaattt 38214106  T
Q  885 attttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaat 984  Q
    ||||| |||||||||||| ||  |||||||||       |||||||||||||||||||||||| |||||   ||||||||  ||||||||||||||||||    
T  38214105 attttccgtttgtttaccataagaaaaatcacttttttaaaacaaataatttagtttgtttgggtacaactatataaaag--gattttttgttacaaaat 38214008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 796 - 986
Target Start/End: Original strand, 1349524 - 1349716
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa-tcag-atctattttacg- 892  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||| ||     
T  1349524 ggctcgtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatattttagagactttataaaaactcagaatctattttgcgt 1349623  T
Q  893 tttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||| ||| |||||||||        ||||||||||| ||||||||||||||||||   ||||||||  ||||||||||||||||||||    
T  1349624 tttgtttactgtaataaaaatcatttttttaaaacaaataatctagtttgtttggatacaactatataaaag-ggattttttgttacaaaatta 1349716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 819 - 982
Target Start/End: Original strand, 35040047 - 35040211
Alignment:
Q  819 taaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtactaaaaatcac 916  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||||||||||| |||||||||     
T  35040047 taaaagtgattttgatataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtttaccgtaataaaaatcat 35040146  T
Q  917 nnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaa 982  Q
           |||||||||||||||||||||||||| ||| | |||||||| | |||||||||||||||    
T  35040147 ttttttaaaacaaataatttagtttgtttggattcaaccatataaaagga-attttttgttacaaa 35040211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 786 - 986
Target Start/End: Original strand, 5249210 - 5249410
Alignment:
Q  786 caaaattaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatca-gatc 883  Q
    ||||||| | |||| ||||||||||||||||||||||| ||||||| ||||||||||||||| |||  |||||||||||| ||||| ||||||||  |||    
T  5249210 caaaattcagggctcgtttgttacggattaaaataaaattgatttttacataaaataatttaaaga-aatattttagagaatttatggaaaatcataatc 5249308  T
Q  884 tattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaa 983  Q
    |||||||||||||||||||||| ||||||||||       ||||||||||||||||| ||||| ||||||   ||||||||  ||||||||||| |||||    
T  5249309 tattttacgtttgtttaccgtagtaaaaatcactttttttaaacaaataatttagttagtttgaatacaactatataaaag-ggattttttgttgcaaaa 5249407  T
Q  984 tta 986  Q
    |||    
T  5249408 tta 5249410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 801 - 916
Target Start/End: Complemental strand, 35041738 - 35041621
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  35041738 gtttgttacggattaaaataaaagtgattttgacgtaagataatttagagattatattttagagattttatgtaaaatcagaatctattttgcgtttgtt 35041639  T
Q  899 taccgtactaaaaatcac 916  Q
    ||||||  ||||||||||    
T  35041638 taccgtgataaaaatcac 35041621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 40591185 - 40591375
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttac----gtt 894  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||| |    |||    
T  40591185 gtttgttacggattaaaataaaagtgattttgacataaattaatttagagattatattttagagattttatgaaaaatcagaatttattttgcgtttgtt 40591284  T
Q  895 tgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||| |||| ||||||||||       |||||||| ||||||||||||||||||| ||||  ||||||    ||||||||||||||||||    
T  40591285 tgtttaacgtaataaaaatcacttttattaaacaaatcatttagtttgtttggatac-aactattaaaagggatttttttgttacaaaatta 40591375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 808 - 986
Target Start/End: Complemental strand, 4728068 - 4727888
Alignment:
Q  808 acggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgta 905  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||| ||||||||||| |||    
T  4728068 acggattaaaataaaagtgattttgatataaaataatttagagtttatattttagagattatatgaaaaatcagaatctattttgcgtttgtttactgta 4727969  T
Q  906 ctaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattt-tttgttacaaaatta 986  Q
     ||||||||||       ||||||||||| ||||||||||| ||||||   ||||||||  ||||| |||||||||||||||    
T  4727968 ataaaaatcaccttttttaaacaaataatctagtttgtttgaatacaactatataaaag-ggatttgtttgttacaaaatta 4727888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 810 - 986
Target Start/End: Original strand, 5246398 - 5246574
Alignment:
Q  810 ggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtact 907  Q
    |||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||| |||||||||  ||||||||| |||| |    
T  5246398 ggattaaaataaaaataattttgacataaaataatttagagattgtattttataga-tttatgaaaaatcagaatctattttgtgtttgtttatcgtaat 5246496  T
Q  908 aaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||||       ||||||||||||||||||||||||||||||   |||||||| ||||||||| |||||||||||    
T  5246497 aaaaatcacttattttaaacaaataatttagtttgtttggatacaactatataaaag-agatttttttttacaaaatta 5246574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 801 - 916
Target Start/End: Complemental strand, 20515507 - 20515390
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatc-agatctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| | ||||||||| ||||||||    
T  20515507 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattattttttagagattttataaaaaatcaaaatctattttgcgtttgtt 20515408  T
Q  899 taccgtactaaaaatcac 916  Q
    || |||| ||||||||||    
T  20515407 tagcgtagtaaaaatcac 20515390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 801 - 915
Target Start/End: Original strand, 36197553 - 36197669
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||||| ||| ||||    
T  36197553 gtttgttacggattaaaataaaaatgattttgacataaaataatttagagattattttttagagattttatgaaaaatcagaatcaattttgcgtctgtt 36197652  T
Q  899 taccgtactaaaaatca 915  Q
    ||||||| |||||||||    
T  36197653 taccgtaataaaaatca 36197669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 28793877 - 28794062
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtt 898  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| | |||||||||  | |||||    
T  28793877 gtttgttacggattaacataaaagtgattttgacatcaaataatttagagattatattttagaaattttatgaaaaatcaaaatctattttgtg-ttgtt 28793975  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||   ||||||||||       ||||||||||||||||||||||||||||||   |||||| |  ||||||| ||||||||||||    
T  28793976 taccgcgataaaaatcactttttttaaacaaataatttagtttgtttggatacaactatataaacg-ggatttttcgttacaaaatta 28794062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 801 - 916
Target Start/End: Complemental strand, 35041519 - 35041402
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  35041519 gtttgttacaaattaaaataaaaatgattttgccataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 35041420  T
Q  899 taccgtactaaaaatcac 916  Q
    ||| ||| ||||||||||    
T  35041419 tactgtaataaaaatcac 35041402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 814 - 986
Target Start/End: Original strand, 19134645 - 19134820
Alignment:
Q  814 taaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtttaccgtactaaaa 911  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||| | || |||||    
T  19134645 taaaataaaagtgattttcacataaaataatttagagattatattttagagattttatgaaaaatcaaaatctattttgcgtttgtttaacataataaaa 19134744  T
Q  912 atcacnnnnnnnaaa--caaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||        |||   ||||||| ||||||||||||||||||   ||||||||  ||||||||||||||||||||    
T  19134745 atcatttttttaaaaacaaaataatctagtttgtttggatacaattatataaaag-ggattttttgttacaaaatta 19134820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 802 - 914
Target Start/End: Original strand, 34383255 - 34383369
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg--aaaatcag-atctattttacgtttgtt 898  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| ||||||||| ||||||||    
T  34383255 tttgttacagattaaaataaaagtgattttgacataaaataatttagagattat-ttttagagattttatgaaaaaatcagaatctattttgcgtttgtt 34383353  T
Q  899 taccgtactaaaaatc 914  Q
    ||  ||| ||||||||    
T  34383354 tagtgtaataaaaatc 34383369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 801 - 938
Target Start/End: Complemental strand, 35041373 - 35041234
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatga-aaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||| |||||||||||||| ||||||| ||||||||| | ||||||    
T  35041373 gtttgttacggattaaaataaaagtaattttgcaataaaataatttagagattaaattctagagattttatgagaaatcagaatctattttgcatttgtt 35041274  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttag 938  Q
    ||||||  ||||||||||       |||||||||||||||    
T  35041273 taccgtgataaaaatcactttttttaaacaaataatttag 35041234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 35040611 - 35040438
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcaga-tctattttacgtttgttt 899  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||               ||||||||| |||||||| |||||||||    
T  35040611 gtttgttacggattaaaataaatgtgattgtgacataaaataatttagcgattttataa-------------aaaatcagaatctattttgcgtttgttt 35040525  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||| ||||||||||       ||||||||||||||||||||||||||||||   ||||||||   |||||||||||||||||||    
T  35040524 accgtaataaaaatcacgttttttaaacaaataatttagtttgtttggatacaactatataaaagggaattttttgttacaaaatta 35040438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 802 - 913
Target Start/End: Complemental strand, 6538249 - 6538136
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgttt 899  Q
    |||||||||||||||||||||||||  || || | ||||||||||||||||||||||||| |||||||| | |||||||| |||||||||  ||||||||    
T  6538249 tttgttacggattaaaataaaagtggcttcgatacaaaataatttagagattatattttaaagattttaagaaaaatcagaatctattttgtgtttgttt 6538150  T
Q  900 accgtactaaaaat 913  Q
    |||||  |||||||    
T  6538149 accgtgataaaaat 6538136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 801 - 869
Target Start/End: Complemental strand, 35041976 - 35041908
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 869  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| || ||||||||||    
T  35041976 gtttgttacggattaaaataaaagtgattttgacataaaataatttttagattattttatagagatttt 35041908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 801 - 902
Target Start/End: Complemental strand, 30054686 - 30054584
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt-ttatgaaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||||||||| ||   |||||||| |||||||||| |||||||    
T  30054686 gtttgttacggattaaaataaaagtgattttaaaataaaataatttagagataat-ttttagagattctttaaaaaatcagaatctattttatgtttgtt 30054588  T
Q  899 tacc 902  Q
    ||||    
T  30054587 tacc 30054584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 801 - 905
Target Start/End: Complemental strand, 17367713 - 17367607
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtt 898  Q
    ||||||||| |||| |||||||||| ||||| | |||||||||||||| |||||||||||||||||||| || |||||| | |||||||||  |||||||    
T  17367713 gtttgttacagattgaaataaaagtaattttaatataaaataatttagtgattatattttagagattttgtgaaaaatcaaaatctattttgtgtttgtt 17367614  T
Q  899 taccgta 905  Q
    |||||||    
T  17367613 taccgta 17367607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 35781257 - 35781429
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcaga-tctattttacgtttgttt 899  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||      ||       ||||||| | |||||||| |||||||||    
T  35781257 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattttat------ga-------aaaatcaaaatctattttgcgtttgttt 35781343  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||| ||||||||||       ||||||| ||| ||||| ||||||||||||   |||||||  | |||||||||||||||||||    
T  35781344 accgtaataaaaatcactttttttaaacaaaaaatctagttcgtttggatacaactatataaaa-tatattttttgttacaaaatta 35781429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 803 - 902
Target Start/End: Complemental strand, 6429707 - 6429606
Alignment:
Q  803 ttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa--tcagatctattttacgtttgttta 900  Q
    |||||||  |||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||  |   ||||||||| ||||||||||    
T  6429707 ttgttacaaattaaaataaaaatgattttcacataaaataatttagagattattttttaaagaatttatgaaaaattataatctattttgcgtttgttta 6429608  T
Q  901 cc 902  Q
    ||    
T  6429607 cc 6429606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 801 - 863
Target Start/End: Original strand, 25458332 - 25458394
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttaga 863  Q
    |||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  25458332 gtttgttatgaattaaaataaaaataattttgacataaaataatttagagattatattttaga 25458394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 801 - 869
Target Start/End: Original strand, 38494368 - 38494436
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 869  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||| ||||||| |||||||||||||    
T  38494368 gtttgttatggattagaataaaagtgattttgacattaaaaaatttaaagattattttttagagatttt 38494436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 18585569 - 18585621
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  18585569 gtttgttatggattaaaataaaagtgattttggcataaaataatttatagatt 18585621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 807 - 869
Target Start/End: Complemental strand, 27124312 - 27124250
Alignment:
Q  807 tacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 869  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||  ||||||| |||||    
T  27124312 tacggattaaaataaaagtgattttaacatttaataatttagagattaatttttagatatttt 27124250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 802 - 876
Target Start/End: Original strand, 19950609 - 19950683
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||| ||||||||||||||||| | ||||||||||  |||  |||||||||||| ||||||| ||||||| ||||    
T  19950609 tttgctacggattaaaataaaaatcattttgacattgaatggtttagagattattttttagacattttataaaaa 19950683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 17342370 - 17342423
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacat-aaaataatttagagatt 853  Q
    |||| |||||||||||||||||||||||||||  || |||||||||||||||||    
T  17342370 gtttattacggattaaaataaaagtgattttgctataaaaataatttagagatt 17342423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 933 - 994
Target Start/End: Original strand, 18585688 - 18585748
Alignment:
Q  933 atttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaattttaaa 994  Q
    |||||||||||||||||||||   ||||||| | |||||||||||||||||||| |||||||    
T  18585688 atttagtttgtttggatacaactatataaaa-acgattttttgttacaaaattacttttaaa 18585748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 12546092 - 12546040
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||| ||| |||||||||||||| || |||| |||||||||||||||||||||    
T  12546092 gtttattatggattaaaataaaaatgtttttaacataaaataatttagagatt 12546040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 811 - 868
Target Start/End: Complemental strand, 19170475 - 19170418
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattt 868  Q
    |||||||||||||||||||||||| |  |||||| || ||||||| ||||| ||||||    
T  19170475 gattaaaataaaagtgattttgactttgaataatatatagattattttttaaagattt 19170418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 801 - 858
Target Start/End: Original strand, 25095740 - 25095797
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatatt 858  Q
    |||||||||| |||| ||||||| |||| ||||||||||| ||| |||||||| ||||    
T  25095740 gtttgttacgaattagaataaaaatgatcttgacataaaaaaatatagagattttatt 25095797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 801 - 858
Target Start/End: Original strand, 25153710 - 25153767
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatatt 858  Q
    |||||||||| |||| ||||||| |||| ||||||||||| ||| |||||||| ||||    
T  25153710 gtttgttacgaattagaataaaaatgatcttgacataaaaaaatatagagattttatt 25153767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 832 - 876
Target Start/End: Original strand, 35038923 - 35038968
Alignment:
Q  832 gacataaaataatttagagattatattttag-agattttatgaaaa 876  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||    
T  35038923 gacataaaataatttcgagattatatttttgaagattttatgaaaa 35038968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 934 - 986
Target Start/End: Original strand, 43582984 - 43583033
Alignment:
Q  934 tttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||||||||||||||||  ||||||||  ||||||||||||||||||||    
T  43582984 tttagtttgtttggatacaaa--tataaaag-ggattttttgttacaaaatta 43583033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 4e-53; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 6844336 - 6844522
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtt 898  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||    
T  6844336 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttataaaaaatcagaatctattttgcgtttgtt 6844435  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| ||||||||||       ||||||||||| |||||||||||||| |||   |||||||| |||||||||||||||||||||    
T  6844436 taccgtaataaaaatcactttttttaaacaaataatctagtttgtttggatgcaactatataaaag-agattttttgttacaaaatta 6844522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 801 - 989
Target Start/End: Original strand, 33674853 - 33675042
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||    
T  33674853 gtttgttacggattaaaataaaaatgattttgacataaaataatttagagattatattttagatattttatgaaaaatcagaatctattttgcgtttgtt 33674952  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    ||||||| ||||||| ||       |||||||||||||| |||| ||||||||||   |||||||| ||||||||||||||||||||||||    
T  33674953 taccgtaataaaaataactttttttaaacaaataatttaatttgattggatacaactatataaaag-agattttttgttacaaaattaatt 33675042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 43326175 - 43325989
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  43326175 gtttgtcacggattaaaataaaagtgattttcacataaaataatttagagattatattttagagattttatgaaaaatcagaatctatttttcgtttgtt 43326076  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||    ||||||||||        ||||||||||||| |||||||||||||||   ||||||||  ||||||||||||||||||||    
T  43326075 taccacgataaaaatcactttttttcaacaaataatttaatttgtttggatacaattatataaaag-ggattttttgttacaaaatta 43325989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 801 - 982
Target Start/End: Original strand, 33240953 - 33241134
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||||    
T  33240953 gtttgttatggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtt 33241052  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaa 982  Q
    || |||| |||||||||        |||||||||||||||||||||| ||| ||| | ||||||||  |||| |||||||||||    
T  33241053 tatcgtaataaaaatca-tttttttaaacaaataatttagtttgtttagattcaaccatataaaag-ggattctttgttacaaa 33241134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 24686063 - 24686252
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagat--tatattttagaga-ttttatg-aaaatcag-atctattttacgttt 895  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| || |||||||| |||||||||||||||    
T  24686063 gtttgttacggattaaaataaaagtaattttgacatacaataatttagagattatatattttagagatttttgtgaaaaatcagaatctattttacgttt 24686162  T
Q  896 gtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||||| ||||||| ||       ||||||||||| |||||||||||||||||    ||||||||  ||||||||||||||||||||    
T  24686163 gtttaccgtaataaaaataactttttttaaacaaataatctagtttgtttggatacagctatataaaag-cgattttttgttacaaaatta 24686252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 803 - 948
Target Start/End: Original strand, 10065983 - 10066131
Alignment:
Q  803 ttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgttta 900  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||| ||||||||||    
T  10065983 ttgttacagattaaaataaaagtgattttgacataaaataatttagaaattatattttagaaattttatgaaaaatcagaatctattttgcgtttgttta 10066082  T
Q  901 ccgtact-aaaaatcacnnnnnnnaaacaaataatttagtttgtttgga 948  Q
    ||||| | |||||| ||       |||||||||||||||||||||||||    
T  10066083 ccgtagtaaaaaattactttttttaaacaaataatttagtttgtttgga 10066131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 11981586 - 11981771
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||| ||||||||    
T  11981586 gtttgttgcagattaaaataaaagtgattttgacataaaataatttagagattatattttagagactttatgaaaaatcagaatctattttccgtttgtt 11981685  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || |||| |||||||          ||||||||||| ||||||||||||||||||   ||||||||  |  |||||||||||||||||    
T  11981686 tatcgtattaaaaatatatttttttaaacaaataatctagtttgtttggatacaactatataaaag--ggatttttgttacaaaatta 11981771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 812 - 986
Target Start/End: Original strand, 17054112 - 17054286
Alignment:
Q  812 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtactaa 909  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||| ||||||||||||||| |||    
T  17054112 attaaaataaaagtgattttgac-taaaataatttagagattatattttagagattaaatgaaaaatcagaatctattttgcgtttgtttaccgtaataa 17054210  T
Q  910 aaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||       ||||||||||| |||||||||| |||||||   |||||||  | |||||||||||||||||||    
T  17054211 aaatcactatttttaaacaaataatctagtttgtttcgatacaactatataaaatga-attttttgttacaaaatta 17054286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 791 - 986
Target Start/End: Complemental strand, 6614488 - 6614293
Alignment:
Q  791 ttaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattt 888  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||| ||||||||    
T  6614488 ttaaaggcccgtttgttacagattaaaataaaagtgattttgacataaaataatttaaagattatattttagaaattttatgaaaaatcagaatctattt 6614389  T
Q  889 tacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||  |||||||||||| | ||||||||       |||||||||||||||||| |||  ||||||   ||||||||    ||||||||||||||||||    
T  6614388 tacaattgtttaccgtaat-aaaatcac-ctttttaaacaaataatttagtttatttaaatacaactatataaaagggatttttttgttacaaaatta 6614293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 804 - 986
Target Start/End: Complemental strand, 43115173 - 43114991
Alignment:
Q  804 tgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttac 901  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||| |||||||||||    
T  43115173 tgttatggattaaaataaaagtaattttgacataaaataatttaaagattattttttagagattttatgaaaaatcagaatctattttgcgtttgtttac 43115074  T
Q  902 cgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||| || |||||||        || |||||||||||||||||||||||||    |||||||   ||||||||||||||||||||    
T  43115073 cgtaatagaaatcacttttttttaa-aaataatttagtttgtttggatacagctatataaaa-tcgattttttgttacaaaatta 43114991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 45807860 - 45808041
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcagatctattttacgtttgttta 900  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    | || || ||| ||||||||||    
T  45807860 gtttgttatggattaaaataaaagtaattttgatataaaataatttagagattatattttagagattttatgaa----atatttactttgcgtttgttta 45807955  T
Q  901 ccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||| |||||||||        ||||||||||| |||||||||||||||||    |||||||||   |||||| |||||||||||    
T  45807956 ccgtaataaaaatcattttttttaaacaaataatctagtttgtttggatacacctatataaaagagatttttttattacaaaatta 45808041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 47795651 - 47795466
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||  |||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||  |||||||    
T  47795651 gtttgttacatattaaaattaaagtgattt-gacataaaataatttagagaatatattttagagattttatgaaaaatcagaatctattttgtgtttgtt 47795553  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| |||||||||        ||||||||||| |||||||||| ||||| |   ||||||||  ||||||||||||||||||||    
T  47795552 taccgtaataaaaatcattttttttaaacaaataatctagtttgttttgatacgactatataaaag-ggattttttgttacaaaatta 47795466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 47795809 - 47795995
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||| |||||||||  |||||||    
T  47795809 gtttgttacggattaaaataaaagtgattttgatataaaataatttatagattatattttagagattatatgaaaaatcagaatctattttgtgtttgtt 47795908  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||| ||| ||||||||          |||||||||| |||||||||| ||||| |   |||||||| | |||||||||||||||||||    
T  47795909 tactgtaataaaaatcttttttttttaacaaataatctagtttgttttgatacgactatataaaagga-attttttgttacaaaatta 47795995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 801 - 953
Target Start/End: Complemental strand, 52404394 - 52404239
Alignment:
Q  801 gtttgttacggatt-aaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaa-aatcag-atctattttacgtttgt 897  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||||||||||    
T  52404394 gtttgttacgtatttaaaataaaaatgattttgacataaaataatttagagattatatattagagattttgtgaagaatcagaatctattttacgtttgt 52404295  T
Q  898 ttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    ||| | |  ||||||||||       ||||||||||| ||||||||| ||||||||    
T  52404294 ttagcatgataaaaatcactttttttaaacaaataatctagtttgttgggatacaa 52404239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 801 - 953
Target Start/End: Complemental strand, 47794812 - 47794658
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| || ||||||  |||||||    
T  47794812 gtttgttacggattaaaataaaagtgattttgacataaaataaattagagattatattttaaagattttatgaaaaatcagaatttattttgtgtttgtt 47794713  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    |   ||  ||||| ||||        |||||||||||||||||||||||||||||    
T  47794712 tgttgtgataaaagtcacttttttttaacaaataatttagtttgtttggatacaa 47794658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 801 - 902
Target Start/End: Complemental strand, 33813479 - 33813376
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt-ttatgaaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||   |||||||| |||||||||| |||||||    
T  33813479 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 33813380  T
Q  899 tacc 902  Q
    ||||    
T  33813379 tacc 33813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 801 - 902
Target Start/End: Complemental strand, 33872949 - 33872846
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt-ttatgaaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||   |||||||| |||||||||| |||||||    
T  33872949 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 33872850  T
Q  899 tacc 902  Q
    ||||    
T  33872849 tacc 33872846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 801 - 902
Target Start/End: Original strand, 47793195 - 47793298
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt-ttatgaaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||   |||||||| |||||||||| |||||||    
T  47793195 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 47793294  T
Q  899 tacc 902  Q
    ||||    
T  47793295 tacc 47793298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 814 - 986
Target Start/End: Original strand, 6318792 - 6318968
Alignment:
Q  814 taaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtactaaaa 911  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||| ||||||| |||||    
T  6318792 taaaatagaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtgtaccgtaataaaa 6318891  T
Q  912 atcacnnnnnnnaaacaaataa---tttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || ||       ||||| ||||   |||| ||||||||||| |||   ||||||||  ||||||||||||||||||||    
T  6318892 attacttttttaaaacagataattttttaatttgtttggatgcaactatataaaag-ggattttttgttacaaaatta 6318968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 49243654 - 49243838
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||| |||||| |||||||| |||||||||   ||||||    
T  49243654 gtttgttatggattaaaataaaagtgattttgatgtaaaataatttagagattata-tttataga-tttatgaaaaatcagaatctattttgtatttgtt 49243751  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||  ||||||| ||       ||||||||||| ||||||||||||||||||   ||||||||  ||||||||||||||||||||    
T  49243752 taccgtgataaaaattactttttttaaacaaataatctagtttgtttggatacaactatataaaag-ggattttttgttacaaaatta 49243838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 807 - 952
Target Start/End: Original strand, 42429472 - 42429620
Alignment:
Q  807 tacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtttaccgt 904  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||  |||||||| || |||||| ||||||||||  ||    
T  42429472 tacggattaaaataaaagtgattttgacataaaataatttagagattattttttatagattatataaaaaatcagaatttattttgcgtttgtttattgt 42429571  T
Q  905 actaaaaatcac-nnnnnnnaaacaaataatttagtttgtttggataca 952  Q
    | ||||||||||        ||| |||||||||||||||||||||||||    
T  42429572 agtaaaaatcactttttattaaataaataatttagtttgtttggataca 42429620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 824 - 986
Target Start/End: Original strand, 48738391 - 48738554
Alignment:
Q  824 gtgattttgacataaaataatttagagattatattttagagattttatg-aaaatca-gatctattttacgtttgtttaccgtactaaaaatcacnnnnn 921  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||| |||||||  |||||||||  ||| |||||||||| ||||||||||         
T  48738391 gtgatttagacataaaataatttagaaattatattttaaagattttatgaaaaatcataatctattttgtgttcgtttaccgtaataaaaatcactcttt 48738490  T
Q  922 nnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
       ||||||||||||||||||||| |||||||   ||||||||  ||||||||||||||||||||    
T  48738491 ttgaacaaataatttagtttgtttagatacaactgtataaaag-tgattttttgttacaaaatta 48738554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 801 - 870
Target Start/End: Complemental strand, 10338376 - 10338307
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttta 870  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10338376 gtttgttacatattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttta 10338307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 801 - 916
Target Start/End: Original strand, 39842667 - 39842783
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtt 898  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  ||||| || |||||||||  |||||||    
T  39842667 gtttgttacg-attaaaataaaaatgattttgacataaaataatttagagattctattttagagattttataaaaaataagaatctattttgtgtttgtt 39842765  T
Q  899 taccgtactaaaaatcac 916  Q
    ||| ||| ||||||||||    
T  39842766 tacagtaataaaaatcac 39842783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 42834817 - 42834765
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42834817 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 42834765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 805 - 915
Target Start/End: Complemental strand, 46675909 - 46675797
Alignment:
Q  805 gttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttacc 902  Q
    |||| |||||||||| |||||||||||||| ||||||||| || ||||||| |||||||||||||||| |||||||| |||||||||  |||| ||||||    
T  46675909 gttaaggattaaaattaaagtgattttgacgtaaaataatatatagattattttttagagattttatgaaaaatcagaatctattttgtgtttatttacc 46675810  T
Q  903 gtactaaaaatca 915  Q
     || |||||||||    
T  46675809 ttaataaaaatca 46675797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 43114633 - 43114685
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43114633 gtttgatacggattaaaataaaagtgattttgacataaaataatttagagatt 43114685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 802 - 854
Target Start/End: Original strand, 47795749 - 47795801
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagatta 854  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47795749 tttgttacggattaaaataaaagtgattttaacataaaataatttagagatta 47795801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 797 - 902
Target Start/End: Original strand, 47882181 - 47882289
Alignment:
Q  797 gctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt-atattttagagattttatg-aaaatcag-atctattttacgt 893  Q
    |||||||||||| | ||||||  |||||||| |||||| ||||||||||||||||||  | |||||||||||||||| ||||| || |||||||||||||    
T  47882181 gctggtttgttatgaattaaatcaaaagtgactttgacgtaaaataatttagagattgtttttttagagattttatgaaaaattagaatctattttacgt 47882280  T
Q  894 ttgtttacc 902  Q
    |||||||||    
T  47882281 ttgtttacc 47882289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 801 - 855
Target Start/End: Complemental strand, 47795712 - 47795658
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 855  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  47795712 gtttgttacggattaaaataaaaatgattttcacataaaataatttagagattat 47795658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 801 - 849
Target Start/End: Original strand, 6941241 - 6941289
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttaga 849  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6941241 gtttgttacggattaaaataaaagtgattttgacgtaaaataatttaga 6941289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 49480444 - 49480392
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  49480444 gtttgttacatattaaaataaaagtgattttgacataaaataatttagagatt 49480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 804 - 953
Target Start/End: Complemental strand, 6941809 - 6941665
Alignment:
Q  804 tgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttac 901  Q
    ||||||||||||||||||||||||||||      ||||  |||| |||||||||||||||||||||||| |||||||| ||| |||||  |||| |||||    
T  6941809 tgttacggattaaaataaaagtgatttt------aaat--tttaaagattatattttagagattttatgaaaaatcagaatcaattttctgtttatttac 6941718  T
Q  902 cgtactaaaaatc-acnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    |||| |||||||| |        ||||||||||| ||||||||||||||||||    
T  6941717 cgtaataaaaatcaattttttttaaacaaataatctagtttgtttggatacaa 6941665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 869
Target Start/End: Complemental strand, 6319238 - 6319170
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 869  Q
    |||||||| |||||||||||||| | |||||||||  |||||||||||||||||| || ||||||||||    
T  6319238 gtttgttatggattaaaataaaaataattttgacacgaaataatttagagattattttctagagatttt 6319170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 849
Target Start/End: Complemental strand, 11335868 - 11335820
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttaga 849  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  11335868 gtttgttacgtattaaaataaaagtgattttgatataaaataatttaga 11335820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 849
Target Start/End: Complemental strand, 11493887 - 11493839
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttaga 849  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  11493887 gtttgttacgtattaaaataaaagtgattttgatataaaataatttaga 11493839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 47796695 - 47796643
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||||||    
T  47796695 gtttgttacgaattaaaataaaagttatttttacataaaataatttagagatt 47796643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 806 - 853
Target Start/End: Original strand, 26271825 - 26271872
Alignment:
Q  806 ttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  26271825 ttacggattaaaataaaagcaattttgacataaaataatttagagatt 26271872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 803 - 853
Target Start/End: Complemental strand, 45296973 - 45296923
Alignment:
Q  803 ttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||| |||||||||||||||||||| || |||||||||||||||||||    
T  45296973 ttgttacagattaaaataaaagtgatttcgatataaaataatttagagatt 45296923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 849 - 986
Target Start/End: Complemental strand, 47795226 - 47795089
Alignment:
Q  849 agattatattttagagattttatgaaaa-tcaga-tctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttg 946  Q
    ||||||||||| ||||||||||| |||| ||||| |||||||| || |||||||||||| ||||||| |        |||||||||||||| ||| ||||    
T  47795226 agattatatttgagagattttataaaaaatcagaatctattttgcgcttgtttaccgtaataaaaatta-tttgtttaaacaaataatttattttttttg 47795128  T
Q  947 gatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||  |||||||   ||||||||||||||||||||    
T  47795127 gatacaaatatataaaa-tggattttttgttacaaaatta 47795089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 816 - 853
Target Start/End: Complemental strand, 7562060 - 7562023
Alignment:
Q  816 aaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7562060 aaataaaagtgattttgacataaaataatttagagatt 7562023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 803 - 868
Target Start/End: Original strand, 8298421 - 8298486
Alignment:
Q  803 ttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattt 868  Q
    |||||||| ||||||||| ||||||||||||| |  ||||||||||||||||| || |||||||||    
T  8298421 ttgttacgaattaaaatataagtgattttgaccttcaataatttagagattattttatagagattt 8298486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 827 - 861
Target Start/End: Original strand, 29300848 - 29300882
Alignment:
Q  827 attttgacataaaataatttagagattatatttta 861  Q
    |||||||||||||||||||||||||||||||||||    
T  29300848 attttgacataaaataatttagagattatatttta 29300882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 811 - 876
Target Start/End: Original strand, 35187751 - 35187816
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||||||||| |||||||||| |||| |||||||||||||||  | ||||| ||||||||| ||||    
T  35187751 gattaaaatataagtgattttaacattaaataatttagagatatttttttatagattttataaaaa 35187816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 856 - 986
Target Start/End: Original strand, 47796215 - 47796347
Alignment:
Q  856 attttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtactaaaaatca-cnnnnnnnaaacaaataatttagtttgtttggataca 952  Q
    ||||||||||||||||| |||||||| || |||||| |||||| |||||||| |||||||||         ||||||||||| | |||||||| ||||||    
T  47796215 attttagagattttatgaaaaatcagaatatattttgcgtttgcttaccgtaataaaaatcattttttttaaaacaaataatctcgtttgtttagataca 47796314  T
Q  953 aacttataaaagaagattttttgttacaaaatta 986  Q
    |   |||||||||| ||||||| |||||||||||    
T  47796315 actatataaaagaa-attttttattacaaaatta 47796347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 801 - 869
Target Start/End: Complemental strand, 47796769 - 47796702
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 869  Q
    ||||||||| ||||||||||||||||| |||||| |  ||| ||||||| ||||| |||||||||||||    
T  47796769 gtttgttacagattaaaataaaagtgactttgaccttgaatgatttagatattat-ttttagagatttt 47796702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 873 - 986
Target Start/End: Complemental strand, 6318809 - 6318694
Alignment:
Q  873 aaaatcagatctattttacgtttgtttaccgtactaaaaatcacnnnnnnn--aaacaaataatttagtttgtttggatacaaacttataaaagaagatt 970  Q
    |||||||  |||||||||||||| ||||||||| ||||||| ||         |||||||||||||||||||||| ||||||| | |||||||  | |||    
T  6318809 aaaatcacttctattttacgtttatttaccgtaataaaaataactttttttttaaacaaataatttagtttgttttgatacaaccgtataaaaagaaatt 6318710  T
Q  971 ttttgttacaaaatta 986  Q
    || |||||| ||||||    
T  6318709 ttatgttacgaaatta 6318694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 801 - 832
Target Start/End: Original strand, 12016775 - 12016806
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttg 832  Q
    ||||||||||||||||||||||||||||||||    
T  12016775 gtttgttacggattaaaataaaagtgattttg 12016806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 885 - 952
Target Start/End: Original strand, 12016801 - 12016868
Alignment:
Q  885 attttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggataca 952  Q
    ||||| |||||||||||| || | ||||||||       |||||||||||||||||||||||||||||    
T  12016801 attttgcgtttgtttaccctaatgaaaatcacttttttaaaacaaataatttagtttgtttggataca 12016868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 924 - 986
Target Start/End: Complemental strand, 45296864 - 45296802
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||| ||||||||||||| ||||||  ||| ||||  ||||||||| |||||||||||    
T  45296864 aaacaaatagtttagtttgtttgaatacaactttacaaaaagagattttttattacaaaatta 45296802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 1e-50; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 802 - 986
Target Start/End: Complemental strand, 35308355 - 35308168
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatca-gatctattttacgtttgttt 899  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||| |||||||||    
T  35308355 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcataatctattttgcgtttgttt 35308256  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaa-gaagattttttgttacaaaatta 986  Q
    |||||  ||||||||||       ||||||||||||||||||||||||||||||   ||||||| | |  ||||||||||||||||||    
T  35308255 accgtgataaaaatcactttttttaaacaaataatttagtttgtttggatacaactatataaaagggattttttttgttacaaaatta 35308168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 6007546 - 6007732
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||| ||||||||    
T  6007546 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatcagaatgtattttgcgtttgtt 6007645  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| ||||||||||       ||||||||||| ||||||||||| ||||||   ||||||||  ||||||||||| ||||||||    
T  6007646 taccgtaataaaaatcactttttttaaacaaataatctagtttgtttgaatacaactatataaaag-ggattttttgttgcaaaatta 6007732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 15199604 - 15199790
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||    
T  15199604 gtttattacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaaactattttatgtttgtt 15199703  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||| ||| ||||||||||       ||||||||||||||||||||||| ||||||   |||||||| || |||||| |||||||||||    
T  15199704 tactgtaataaaaatcactttttttaaacaaataatttagtttgtttgaatacaactatataaaaggag-ttttttattacaaaatta 15199790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 801 - 982
Target Start/End: Original strand, 5764755 - 5764937
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  5764755 gtttgttacaaattaaaataaaagtgattttgacataaaataatttagcgattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 5764854  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaa 982  Q
    ||||||| ||||||||||       ||||||||||| |  |||||||||||||||   ||||||||  ||||||||||||||||    
T  5764855 taccgtaataaaaatcactttttttaaacaaataatctgatttgtttggatacaactatataaaag-ggattttttgttacaaa 5764937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 13916412 - 13916593
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa-tc-agatctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||     |||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||||| ||||||||    
T  13916412 gtttgttacggattaaaataaaagt-----tgacataaaataatttagagtttatattttagagattttatgaaaagtcaaaatctattttgcgtttgtt 13916506  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||| || ||||||||||       ||||||||||||||||||||||||||||||   ||||||||  ||||||||||||||||||||    
T  13916507 taccataataaaaatcacgttttttaaacaaataatttagtttgtttggatacaactatataaaag-ggattttttgttacaaaatta 13916593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 801 - 915
Target Start/End: Complemental strand, 1153882 - 1153766
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  1153882 gtttgttacagattaaaataaaagtgattttgatataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 1153783  T
Q  899 taccgtactaaaaatca 915  Q
    ||||||| |||||||||    
T  1153782 taccgtaataaaaatca 1153766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 17073198 - 17073011
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| |||||||||| |||||||    
T  17073198 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatatattatagattttgtgaaaaatcagaatctattttatgtttgtt 17073099  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || | |  ||||||| ||       ||||| ||||| || |||||||||||||||   |||||||||   |||||| |||||||||||    
T  17073098 tagcatgataaaaattactttttttaaacatataatataatttgtttggatacaactatataaaagagatttttttattacaaaatta 17073011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 17575072 - 17575259
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| |||||||||| |||||||    
T  17575072 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatatattatagattttgtgaaaaatcagaatctattttatgtttgtt 17575171  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || | |  ||||||| ||       ||||| ||||| || |||||||||||||||   |||||||||   |||||| |||||||||||    
T  17575172 tagcatgataaaaattactttttttaaacatataatataatttgtttggatacaactatataaaagagatttttttattacaaaatta 17575259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 802 - 986
Target Start/End: Complemental strand, 342897 - 342712
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttta-tgaaaatcag-atctattttacgtttgttt 899  Q
    ||||||||  |||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||| | | | |||| ||||||||| | |||||||    
T  342897 tttgttacttattaaattaaaagtgattttcacaatgaataatttagagattatattttagagattttattcatattcagaatctattttgcatttgttt 342798  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||| |||||||||        ||| ||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  342797 accgtaataaaaatcattttttttaaataaataatttagtttgtttggatacaactatataaaag-agattttttgttacaaaatta 342712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 801 - 915
Target Start/End: Complemental strand, 27882667 - 27882551
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||| |||||| | ||||||||| ||||||||    
T  27882667 gtttgttacggattaaaataaaagtgattttgacataaaataatatagagattattttttggagatattatgaaaaatcaaaatctattttgcgtttgtt 27882568  T
Q  899 taccgtactaaaaatca 915  Q
    || |||| |||||||||    
T  27882567 tagcgtagtaaaaatca 27882551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 801 - 915
Target Start/End: Complemental strand, 28022847 - 28022731
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||| |||||| | ||||||||| ||||||||    
T  28022847 gtttgttacggattaaaataaaagtgattttgacataaaataatatagagattattttttggagatattatgaaaaatcaaaatctattttgcgtttgtt 28022748  T
Q  899 taccgtactaaaaatca 915  Q
    || |||| |||||||||    
T  28022747 tagcgtagtaaaaatca 28022731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 40737293 - 40737486
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttga-------cataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttac 891  Q
    ||||||||||||||||||||||||||||||||        |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||| |    
T  40737293 gtttgttacggattaaaataaaagtgattttggattttgccatataataatttagagattatattttagagattttatgaaaaatcagaatctattttgc 40737392  T
Q  892 gtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
     ||| |||||| |  |||||||||         |||||||||| ||||||||||||||||||   |||||||||| |||||||||||||||||||    
T  40737393 atttttttaccttgataaaaatcaattcttttgaacaaataatctagtttgtttggatacaactatataaaagaa-attttttgttacaaaatta 40737486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 806 - 915
Target Start/End: Original strand, 24981386 - 24981497
Alignment:
Q  806 ttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtttaccg 903  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| | |||||||||| |||| |||||||    
T  24981386 ttacgtattaaaataaaattgattttgtcataaaataatatagagattatattttagagattttatgaaaaatcgaaatctattttatgtttttttaccg 24981485  T
Q  904 tactaaaaatca 915  Q
    || |||||||||    
T  24981486 taataaaaatca 24981497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 836 - 953
Target Start/End: Complemental strand, 28828215 - 28828096
Alignment:
Q  836 taaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataa 933  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||| ||||||||| ||||||||||||||| ||||||||||       ||||||||||    
T  28828215 taaaataatttagagattatagtttagagattttataaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcactttttttaaacaaataa 28828116  T
Q  934 tttagtttgtttggatacaa 953  Q
    |||| |||||||||||||||    
T  28828115 tttaatttgtttggatacaa 28828096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 804 - 914
Target Start/End: Original strand, 339730 - 339842
Alignment:
Q  804 tgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtttac 901  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| | |||||| | ||||||||| |||||||||||    
T  339730 tgttatggattaaaataaaagtgattttgacatcgaataatttagagattattttttagagattttacgaaaaatcaaaatctattttgcgtttgtttac 339829  T
Q  902 cgtactaaaaatc 914  Q
    | || ||||||||    
T  339830 cctaataaaaatc 339842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 801 - 869
Target Start/End: Original strand, 4443849 - 4443917
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 869  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  4443849 gtttgttacggattaaaataaaagtgattttgacataaaataatttatagattatattttaaagatttt 4443917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 812 - 983
Target Start/End: Original strand, 27964698 - 27964872
Alignment:
Q  812 attaaaataaaagtgattttgacataaaataattt--agagattatattttagagattttatgaa-aatcag-atcta-ttttacgtttgtttaccgtac 906  Q
    |||||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| |||| ||||     
T  27964698 attaaaataaaagtgattttgacagaaaataatttagagagattgtattttagagattttatgaataatcagaatctattttttcgttt-tttatcgtaa 27964796  T
Q  907 taaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaa 983  Q
    | ||||||||       |||||||||||| |||||||||||||||||   ||||||||  |||||||||||||||||    
T  27964797 tcaaaatcacttttttaaaacaaataattgagtttgtttggatacaactatataaaag-ggattttttgttacaaaa 27964872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 840 - 986
Target Start/End: Original strand, 1030294 - 1030441
Alignment:
Q  840 ataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataattta 937  Q
    ||||||||||||||||||||||||||||||||| |||||| | ||||||||| | ||||||||||||| |||||||||        ||| |||| ||||     
T  1030294 ataatttagagattatattttagagattttatgaaaaatcaaaatctattttgcatttgtttaccgtagtaaaaatcaattttttaaaaaaaattatttg 1030393  T
Q  938 gtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||||||||||   ||||||||  ||||||||||||||||||||    
T  1030394 gtttgtttggatacaactatataaaag-tgattttttgttacaaaatta 1030441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 801 - 913
Target Start/End: Complemental strand, 11464707 - 11464593
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaa-aatc-agatctattttacgtttgtt 898  Q
    ||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||| |||| | || |||||| ||||||||    
T  11464707 gtttgttacagattaaaataaaaatgattttgacgaaaaataatttagagattatattttaaagattttatgaataatctaaatttattttgcgtttgtt 11464608  T
Q  899 taccgtactaaaaat 913  Q
    ||  ||| |||||||    
T  11464607 tagggtaataaaaat 11464593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 811 - 989
Target Start/End: Original strand, 28022256 - 28022423
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatc-aga-tctattttacgtttgtttaccgtacta 908  Q
    |||||||||||||||||||||||||||||||||||||||||            ||||||||||||| | ||| ||||||||    |||||||||||| ||    
T  28022256 gattaaaataaaagtgattttgacataaaataatttagaga------------gattttatgaaaaaccagaatctattttttcgttgtttaccgtaata 28022343  T
Q  909 aaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    ||||||||       ||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||| |||||    
T  28022344 aaaatcactttttaaaaacaaataatttagtttgtttggatacaactatataaaag-agattttttgttacaaaactaatt 28022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 801 - 876
Target Start/End: Complemental strand, 27965885 - 27965810
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||    
T  27965885 gtttattactgattaaaataaaagtgattttgacataaaataatatagagattattttttggagatattatgaaaa 27965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 802 - 853
Target Start/End: Complemental strand, 5424689 - 5424638
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5424689 tttgttacggattaaaataaaagtgattttaacataaaataatttagagatt 5424638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 811 - 989
Target Start/End: Original strand, 27882075 - 27882243
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtacta 908  Q
    ||||||||||||||||||||||||||||||||||||||            |||||||||||| |||| ||| |||||||||    |||||||||||| ||    
T  27882075 gattaaaataaaagtgattttgacataaaataatttag------------agagattttatgaaaaaccagaatctattttttcgttgtttaccgtaata 27882162  T
Q  909 aaaatcacnnnnnnnaaac-aaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    ||||||||       |||| ||||||||||||||||||||||||||   |||||||| |||||||||||||||||| |||||    
T  27882163 aaaatcactttttaaaaacaaaataatttagtttgtttggatacaactatataaaag-agattttttgttacaaaactaatt 27882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 853 - 986
Target Start/End: Original strand, 5424697 - 5424832
Alignment:
Q  853 tatattttagagattttatgaaaa-tcaga-tctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggata 950  Q
    |||||||||||||||||||||||| ||||| |||||||| | ||||||||  ||| ||||||| ||       |||||||||||||||||||||||||||    
T  5424697 tatattttagagattttatgaaaaatcagaatctattttgcctttgtttagtgtaataaaaataactttttttaaacaaataatttagtttgtttggata 5424796  T
Q  951 caaacttataaaagaagattttttgttacaaaatta 986  Q
    |||   ||||||||    ||||||||||||||||||    
T  5424797 caactatataaaagggatttttttgttacaaaatta 5424832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 801 - 953
Target Start/End: Original strand, 32795259 - 32795411
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa--tcagatctattttacgtttgtt 898  Q
    |||||||||  |||||| ||||| | ||||||||||||||||||||||| ||||| ||||| ||||||||| ||||  | | |||||||||  |||||||    
T  32795259 gtttgttacatattaaattaaaaataattttgacataaaataatttagatattat-ttttatagattttattaaaaattaaaatctattttgtgtttgtt 32795357  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    ||||||| |||||| |||       ||| ||||||||||||||||||| ||||||    
T  32795358 taccgtagtaaaaaacac-ttttttaaataaataatttagtttgtttgaatacaa 32795411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 27917424 - 27917596
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcagatc-tattttacgtttgttt 899  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||      ||       ||||||| ||  ||||||   |||||||    
T  27917424 gtttgttacgaattaaaataaaagtgattttgatataaaataatttaaagattatat------ga-------aaaatcacattatattttgtatttgttt 27917510  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || ||| ||||||||||       ||||||||||| ||||||||||||||||||   |||||||||| |||||||||||||||||||    
T  27917511 actgtaataaaaatcactttttttaaacaaataatctagtttgtttggatacaactatataaaagaa-attttttgttacaaaatta 27917596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 27963843 - 27964015
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcagatc-tattttacgtttgttt 899  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||      ||       ||||||| ||  ||||||   |||||||    
T  27963843 gtttgttacgaattaaaataaaagtgattttgatataaaataatttaaagattatat------ga-------aaaatcacattatattttgtatttgttt 27963929  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || ||| ||||||||||       ||||||||||| ||||||||||||||||||   |||||||||| |||||||||||||||||||    
T  27963930 actgtaataaaaatcactttttttaaacaaataatctagtttgtttggatacaactatataaaagaa-attttttgttacaaaatta 27964015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 853 - 986
Target Start/End: Original strand, 6007955 - 6008089
Alignment:
Q  853 tatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggata 950  Q
    ||||||||||||||||| || |||||||| ||||||||| |||||| ||| |||| ||||||||||       |||||||| || ||||||||||| |||    
T  6007955 tatattttagagattttgtgaaaaatcagaatctattttgcgtttgcttatcgtaataaaaatcacattttttaaacaaattatctagtttgtttgcata 6008054  T
Q  951 caaacttataaaagaagattttttgttacaaaatta 986  Q
    |||   ||||||||  ||||||||||||||||||||    
T  6008055 caattatataaaag-ggattttttgttacaaaatta 6008089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 801 - 855
Target Start/End: Complemental strand, 35102789 - 35102735
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 855  Q
    |||||||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  35102789 gtttgttacatattaaaataaaagtgattttgatataaaataatttagagattat 35102735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 884 - 986
Target Start/End: Original strand, 27881272 - 27881373
Alignment:
Q  884 tattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaa 983  Q
    |||||| ||||||||||| | | ||||||||||       ||||||||||| ||||||||||||||||||   |||||||||| ||||||||||||||||    
T  27881272 tattttgcgtttgtttactgcaataaaaatcactttttttaaacaaataatctagtttgtttggatacaactatataaaagaa-attttttgttacaaaa 27881370  T
Q  984 tta 986  Q
    |||    
T  27881371 tta 27881373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 884 - 986
Target Start/End: Original strand, 28021453 - 28021554
Alignment:
Q  884 tattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaa 983  Q
    |||||| ||||||||||| | | ||||||||||       ||||||||||| ||||||||||||||||||   |||||||||| ||||||||||||||||    
T  28021453 tattttgcgtttgtttactgcaataaaaatcactttttttaaacaaataatctagtttgtttggatacaactatataaaagaa-attttttgttacaaaa 28021551  T
Q  984 tta 986  Q
    |||    
T  28021552 tta 28021554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 857
Target Start/End: Original strand, 27881201 - 27881257
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 857  Q
    |||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  27881201 gtttgttacgaattaaaatgaaattgattttgatataaaataatttagagattatat 27881257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 857
Target Start/End: Original strand, 28021382 - 28021438
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 857  Q
    |||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  28021382 gtttgttacgaattaaaatgaaattgattttgatataaaataatttagagattatat 28021438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 33489545 - 33489493
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  33489545 gtttgttacgaattaaaataaaagtgattttgacattcaataatttagagatt 33489493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 813 - 856
Target Start/End: Original strand, 5424259 - 5424302
Alignment:
Q  813 ttaaaataaaagtgattttgacataaaataatttagagattata 856  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  5424259 ttaaaataaaagtgattttgacataaaataatttaaagattata 5424302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 820 - 875
Target Start/End: Original strand, 18969454 - 18969509
Alignment:
Q  820 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaa 875  Q
    |||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  18969454 aaaaatgattttgacattcaataatttagagattattttttagagattttatgaaa 18969509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 593 - 659
Target Start/End: Original strand, 41931049 - 41931115
Alignment:
Q  593 gaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtcaaacagcggct 659  Q
    ||||||||| |||| | |||||||||| ||||||||||||| |||||||| |||||||||| |||||    
T  41931049 gaatttgaataaattgttattgttccacgataagctatttagtacaaaatattgtcaaacaacggct 41931115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 811 - 913
Target Start/End: Complemental strand, 7285033 - 7284925
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-----gaaaatcag-atctattttacgtttgtttaccgt 904  Q
    |||||| |||||||||||||| ||||  ||||||||| | ||||| |||||||||||||||      |||||||| || |||||||||||||||||||||    
T  7285033 gattaagataaaagtgatttttacattgaataatttaaaaattattttttagagattttataaagaaaaaatcagaatttattttacgtttgtttaccgt 7284934  T
Q  905 actaaaaat 913  Q
      |||||||    
T  7284933 gataaaaat 7284925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 820 - 876
Target Start/End: Complemental strand, 18947085 - 18947029
Alignment:
Q  820 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||| ||||||||||||  |||||||||||| |||| ||||||||||||||||||||    
T  18947085 aaaaatgattttgacattcaataatttagaggttattttttagagattttatgaaaa 18947029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 808 - 844
Target Start/End: Complemental strand, 28828567 - 28828531
Alignment:
Q  808 acggattaaaataaaagtgattttgacataaaataat 844  Q
    |||||||||||||||||||||||||||||||||||||    
T  28828567 acggattaaaataaaagtgattttgacataaaataat 28828531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 805 - 853
Target Start/End: Complemental strand, 40796381 - 40796333
Alignment:
Q  805 gttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  40796381 gttatggattaaaataaaagtgatcttgacatataataatttagagatt 40796333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 802 - 849
Target Start/End: Complemental strand, 45045587 - 45045540
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttaga 849  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||    
T  45045587 tttgttacggattaaaataaaagtaattttgacataaattgatttaga 45045540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 801 - 839
Target Start/End: Original strand, 5765544 - 5765582
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaa 839  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5765544 gtttgttacgaattaaaataaaagtgattttgacataaa 5765582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 805 - 855
Target Start/End: Original strand, 6007489 - 6007539
Alignment:
Q  805 gttacggattaaaataaaagtgattttgacataaaataatttagagattat 855  Q
    ||||||||||||||| ||||| |||||| | ||||||||||||||||||||    
T  6007489 gttacggattaaaattaaagtaattttgtcttaaaataatttagagattat 6007539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 809 - 851
Target Start/End: Original strand, 17072756 - 17072798
Alignment:
Q  809 cggattaaaataaaagtgattttgacataaaataatttagaga 851  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  17072756 cggattaaaataaaggtgattttgatataaaataatttagaga 17072798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 809 - 851
Target Start/End: Complemental strand, 17575515 - 17575473
Alignment:
Q  809 cggattaaaataaaagtgattttgacataaaataatttagaga 851  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  17575515 cggattaaaataaaggtgattttgatataaaataatttagaga 17575473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 881 - 985
Target Start/End: Complemental strand, 5424622 - 5424521
Alignment:
Q  881 atctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttaca 980  Q
    ||||||||| |||||||||||| || |||||||||        |||||||||||| |||||||||||||||||   |||||||| ||| |||||||||||    
T  5424622 atctattttgcgtttgtttaccttaataaaaatca-tctttttaaacaaataatt-agtttgtttggatacaactatataaaag-agactttttgttaca 5424526  T
Q  981 aaatt 985  Q
    |||||    
T  5424525 aaatt 5424521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 41933502 - 41933553
Alignment:
Q  249 tttgatcaccatgtcatatacttctttgtaagtttgccacttgtacttgcca 300  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| | ||||||    
T  41933502 tttgatcaccaagtcatacacttctttgtaagtttgccaattgaatttgcca 41933553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 588 - 662
Target Start/End: Original strand, 1310124 - 1310198
Alignment:
Q  588 tagcagaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtcaaacagcggctata 662  Q
    |||||||||||||| |||| | ||||||||| |||||  ||||||| ||||| || |||| ||| ||||||||||    
T  1310124 tagcagaatttgaacaaattgctattgttccttgatacactatttagtacaatatattgtgaaatagcggctata 1310198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 853 - 950
Target Start/End: Complemental strand, 5765537 - 5765438
Alignment:
Q  853 tatattttagagattttatg-aaaatc-agatctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggata 950  Q
    ||||||||||||||||| || |||||| | |||||||||  |||||||||| ||| ||||||||||       ||||||||||| |||||||||| ||||    
T  5765537 tatattttagagattttgtgaaaaatcaaaatctattttgtgtttgtttactgtaataaaaatcacattttttaaacaaataatctagtttgtttagata 5765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 924 - 953
Target Start/End: Original strand, 4443963 - 4443992
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaa 953  Q
    ||||||||||||||||||||||||||||||    
T  4443963 aaacaaataatttagtttgtttggatacaa 4443992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 813 - 846
Target Start/End: Original strand, 28152350 - 28152383
Alignment:
Q  813 ttaaaataaaagtgattttgacataaaataattt 846  Q
    |||||||||||||||||||||||| |||||||||    
T  28152350 ttaaaataaaagtgattttgacatcaaataattt 28152383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 802 - 855
Target Start/End: Complemental strand, 44964293 - 44964241
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 855  Q
    |||||||  ||||||||||||||||| ||||| || ||||||||||||||||||    
T  44964293 tttgttatagattaaaataaaagtgaatttgatat-aaataatttagagattat 44964241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 2e-48; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 7239109 - 7238923
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatca-gatctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||| | ||||||    
T  7239109 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcataatctattttgcatttgtt 7239010  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| |||||||||        ||||||||||| ||||||||||||||||||   ||||||||  || |||||||||||||||||    
T  7239009 taccgtaataaaaatcattttttttaaacaaataatctagtttgtttggatacaactatataaaag-ggaatttttgttacaaaatta 7238923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 54175710 - 54175895
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||||||| ||||| ||    
T  54175710 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattataatttacagattttatgaaaaatcagaatctattttgcgtttttt 54175809  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||||||||||||       ||| ||||||| ||||||||||||||||||   ||||||||  ||||||||||||||||||||    
T  54175810 taccgtactaaaaatcac-tttttaaaataaataatctagtttgtttggatacaactatataaaag-ggattttttgttacaaaatta 54175895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 27839182 - 27838995
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || |||||| ||||||||    
T  27839182 gtttgttacagattaaaataaaagagattttgacataaaataatttagagattgtattttagagattttatgaaaaatcagaatttattttgcgtttgtt 27839083  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| ||||||||||       ||||||||||| ||||||||||||||||||   || |||||    ||||||||||||||||||    
T  27839082 taccgtaataaaaatcactttttttaaacaaataatctagtttgtttggatacaactatacaaaagggatttttttgttacaaaatta 27838995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 801 - 953
Target Start/End: Original strand, 9518898 - 9519053
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||||    
T  9518898 gtttgttacggattaaaataaaagtgatttagacataaaataatttagagattatattttagagattttgtgaaaaatcagaatctattttgcgtttgtt 9518997  T
Q  899 taccgt-actaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    |||||| |  ||||| |||       ||||||||||||||||||||||||||||||    
T  9518998 taccgtgataaaaaaacactttttttaaacaaataatttagtttgtttggatacaa 9519053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 19298736 - 19298548
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  19298736 gtttgttacggattaaaataaaagtgatttttgcataaaagaatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 19298637  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaa-gaagattttttgttacaaaatta 986  Q
    ||||    ||||||||||       ||||||||||||||||||||||| ||||||   ||||||| | |  ||||||||||||||||||    
T  19298636 taccacgataaaaatcactttttttaaacaaataatttagtttgtttgaatacaactatataaaagggattttttttgttacaaaatta 19298548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 801 - 989
Target Start/End: Original strand, 41692308 - 41692497
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa--tcagatctattttacgtttgtt 898  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||  | | || |||||| ||||| ||    
T  41692308 gtttgttacagattaaaataaaagtgattttgacataaaatactttaaagattatattttagtaattttatgaaaaattaaaatttattttgcgtttttt 41692407  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    ||||||| |||||||||        |||| |||||||||||||||||||||||||   ||||||| | |||||||||||||||||||||||    
T  41692408 taccgtaataaaaatcattttttttaaactaataatttagtttgtttggatacaattatataaaa-aggattttttgttacaaaattaatt 41692497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 801 - 953
Target Start/End: Original strand, 43495700 - 43495854
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcaga-tctattttacgtttgtt 898  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||||| ||||||||    
T  43495700 gtttgttaaggattaaaataaaagtgattttcacataaaataatttagatattatattttagagattgtatgaaaaatcagattctattttgcgtttgtt 43495799  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    ||||  | ||||||||||       |||||||||||||| |||||||| ||||||    
T  43495800 taccacaataaaaatcactttttttaaacaaataatttaatttgtttgtatacaa 43495854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 801 - 989
Target Start/End: Complemental strand, 2494297 - 2494107
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  |||| |||||||||||||||||||||| ||||| || ||||||||| ||||||||    
T  2494297 gtttgttacgggttaaaataaaattgattttgacataaaataa--tagatattatattttagagattttatgaaaaataagaatctattttgcgtttgtt 2494200  T
Q  899 taccgtactaaaaatcac---nnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    ||||||| ||||||||||           |||||||||  ||||||||||||||||||   |||||||| ||||||||||||||||||||||||    
T  2494199 taccgtagtaaaaatcactttttttttttaacaaataacctagtttgtttggatacaactatataaaag-agattttttgttacaaaattaatt 2494107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 801 - 899
Target Start/End: Complemental strand, 36638793 - 36638694
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaa-atcagatctattttacgtttgttt 899  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  36638793 gtttgttacagattaaaataaaaatgattttcacataaaataatttagagattatattttagagattttatgaaatatcagatctaatttacgtttgttt 36638694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 12928425 - 12928611
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa-tcaga-tctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| || |||| ||||| | ||||||  |||||||    
T  12928425 gtttgttacggattaaaataaaagtgattttgacgtaaaataatttagagattattttgtagagatttaataaaaaatcagaatttattttgtgtttgtt 12928524  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaa-gattttttgttacaaaatta 986  Q
    || |||| ||||||| ||       ||| |||||||||||||||||||||||||    ||||||| || ||||||||||||||||||||    
T  12928525 tatcgtagtaaaaattactttttttaaataaataatttagtttgtttggatacatc--tataaaaaaatgattttttgttacaaaatta 12928611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 801 - 953
Target Start/End: Original strand, 660043 - 660197
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||| ||||| || ||||||||| ||||||||    
T  660043 gtttgttacggattaaaataaaagtgattttcacgtaaaataatttaaaaattatattttagagattttatgaaaaattagaatctattttgcgtttgtt 660142  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    |||  || |||||||||        ||||||||||| ||||||||||| ||||||    
T  660143 tacgttaataaaaatcattttttttaaacaaataatctagtttgtttgaatacaa 660197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 801 - 916
Target Start/End: Complemental strand, 54807066 - 54806949
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||   ||||||    
T  54807066 gtttgttacaaattaaaataaaagtgattttgacataaaataagttagagattatattttagagattttgtgaaaaatcagaatctattttgtatttgtt 54806967  T
Q  899 taccgtactaaaaatcac 916  Q
    ||||||| ||||||||||    
T  54806966 taccgtaataaaaatcac 54806949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 49897570 - 49897386
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||||||||||||| |||| |||||| |||||||  |||||||||||||||||| ||||||||||| |||||||| || ||||||   ||||||    
T  49897570 gtttgttacggattaaaatagaagttattttgccataaaa--atttagagattatattttcgagattttatgaaaaatcagaatttattttgtatttgtt 49897473  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| ||||||||||       ||| ||||||| ||||||||||||||||||   ||||||||  |||| |||||||||||||||    
T  49897472 taccgtaataaaaatcactttttaaaaataaataatctagtttgtttggatacaactatataaaag-ggattatttgttacaaaatta 49897386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 801 - 916
Target Start/End: Complemental strand, 5029193 - 5029076
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtt 898  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| | ||||||||||| |||||     
T  5029193 gtttgttaaagattaaaataaaagtgattttgacgtaaaataatttagagattatattttagagattttttgaaaaatcaaaatctattttacatttgta 5029094  T
Q  899 taccgtactaaaaatcac 916  Q
    ||||||  ||||||||||    
T  5029093 taccgtgataaaaatcac 5029076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 801 - 904
Target Start/End: Original strand, 32500136 - 32500241
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatca-gatctattttacgtttgtt 898  Q
    |||| |||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| |||||||  ||||||||||||||||||    
T  32500136 gtttattacagattaaaataaaagtgattttaatataaaataatttagagattattttttagagattttatgaaaaatcataatctattttacgtttgtt 32500235  T
Q  899 taccgt 904  Q
    ||||||    
T  32500236 taccgt 32500241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 801 - 900
Target Start/End: Complemental strand, 39136251 - 39136150
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtt 898  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||||| ||||||||| ||||||||    
T  39136251 gtttgttacgaattaaaataaaagtgattttgagataaaataatttagagattatattttagagattttttaaaaaatcagaatctattttgcgtttgtt 39136152  T
Q  899 ta 900  Q
    ||    
T  39136151 ta 39136150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 801 - 876
Target Start/End: Original strand, 16877054 - 16877129
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  16877054 gtttgttacggattaaaataaaagtgattataacataaaataatttagagattattttttagagattttatgaaaa 16877129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 36889891 - 36889705
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatca-gatctattttacgtttgtt 898  Q
    |||||||||  ||||||||||||| |||||||| || |||| ||||||||||||| ||||| | |||||||| |||||||  ||||||| |  |||||||    
T  36889891 gtttgttacaaattaaaataaaagcgattttgatattaaattatttagagattattttttaaaaattttatgaaaaatcataatctattgtgtgtttgtt 36889792  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| ||||||||||        || ||||||||||||||||||||||||||   ||||||| | ||||||||||||||||||||    
T  36889791 taccgtaataaaaatcactattttttaaaaaataatttagtttgtttggatacaacggtataaaa-atgattttttgttacaaaatta 36889705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 801 - 913
Target Start/End: Original strand, 49866980 - 49867094
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa-tcag-atctattttacgtttgtt 898  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| |||| || |||||| ||||||||    
T  49866980 gtttgtcacggattagaataaaagtgattttgacataaaataatttagatattacattttagagattttataaaaagtcagaatttattttgcgtttgtt 49867079  T
Q  899 taccgtactaaaaat 913  Q
    ||||||  |||||||    
T  49867080 taccgttataaaaat 49867094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 801 - 876
Target Start/End: Complemental strand, 7070697 - 7070622
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||||||||||||    
T  7070697 gtttgttacggattaaaataaaagtgattttgacataaaataatttaaagattcttttttaaagattttatgaaaa 7070622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 812 - 902
Target Start/End: Complemental strand, 45032412 - 45032320
Alignment:
Q  812 attaaaataaaagtgattttgacataaaataatttagagattatattttagagatt-ttatgaaaatcag-atctattttacgtttgtttacc 902  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||   |||||||| |||||||||| |||||||||||    
T  45032412 attaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtttacc 45032320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 802 - 876
Target Start/End: Original strand, 53140136 - 53140209
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  53140136 tttgttacggattaaaataaaactgattttgacataaaataattt-gagattatattataaagattttatgaaaa 53140209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 807 - 913
Target Start/End: Original strand, 39476299 - 39476405
Alignment:
Q  807 tacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtttaccgt 904  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||||| |||||||||||||||  |||||||| ||||||||| |||||| |||||||    
T  39476299 tacggattaaaataa--gtgattttgacattgaataatttagagattattttttagagattttataaaaaatcagaatctattttgcgtttgcttaccgt 39476396  T
Q  905 actaaaaat 913  Q
    | |||||||    
T  39476397 aataaaaat 39476405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 660466 - 660518
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  660466 gtttgttacggatttaaataaaagtgattttgacataaaataatttagagatt 660518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 13222071 - 13222123
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13222071 gtttgttacggattaaaataaaagtgattttgatataaaataatttagagatt 13222123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 24739271 - 24739219
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24739271 gtttgttacggattaaaataaaagtgattttgatataaaataatttagagatt 24739219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 801 - 857
Target Start/End: Original strand, 29100711 - 29100767
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 857  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  29100711 gtttgttacggattaaaataaaagtgattttgatataaaataatttaaagattatat 29100767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 801 - 869
Target Start/End: Complemental strand, 42746968 - 42746904
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 869  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||    
T  42746968 gtttgttacggattaaaataaaagtgattttgacat----taatttagagattattttttagagatttt 42746904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 802 - 853
Target Start/End: Complemental strand, 42816179 - 42816128
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42816179 tttgttacggattaaaataaaagtgattttgacgtaaaataatttagagatt 42816128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 16435943 - 16435995
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  16435943 gtttgttacggactaaaataaaagtgattttgaaataaaataatttagagatt 16435995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 805 - 853
Target Start/End: Original strand, 41103892 - 41103940
Alignment:
Q  805 gttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41103892 gttacggattaaaataaaagtgattttcacataaaataatttagagatt 41103940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 818 - 974
Target Start/End: Complemental strand, 42314626 - 42314466
Alignment:
Q  818 ataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa---tca-gatctattttacgtttgtttaccgtactaaaaat 913  Q
    ||||||||||||||||||| |||||||||||| ||||| || |||||||| ||  ||||   |||  |||||||||  ||||||||||| |  |||||||    
T  42314626 ataaaagtgattttgacattaaataatttagaaattattttgtagagattctaaaaaaaaattcataatctattttgtgtttgtttaccttgataaaaat 42314527  T
Q  914 cacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagatttttt 974  Q
    |||       ||| ||||||||||||||||||||||||||   ||||||||  ||||||||    
T  42314526 cacttattttaaaaaaataatttagtttgtttggatacaactatataaaaggggatttttt 42314466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 858 - 953
Target Start/End: Complemental strand, 24739228 - 24739131
Alignment:
Q  858 tttagagattttatgaaaatcaga-tctattttacgtttgtttaccgtactaaaaatcac-nnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    |||||||||||||| ||||||||| || ||||| |||||||||||| || ||||||||||        ||||||||||||||||||||||||||||||    
T  24739228 tttagagattttataaaaatcagaatccattttgcgtttgtttaccataataaaaatcacttttttataaacaaataatttagtttgtttggatacaa 24739131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 857
Target Start/End: Original strand, 44886061 - 44886117
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 857  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||    
T  44886061 gtttgttacggcttaaaataaaagtaattttaacataaaataatttagaaattatat 44886117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 810 - 853
Target Start/End: Original strand, 50715573 - 50715616
Alignment:
Q  810 ggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  50715573 ggattaaaataaaagtgattttcacataaaataatttagagatt 50715616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 831 - 869
Target Start/End: Complemental strand, 31837805 - 31837767
Alignment:
Q  831 tgacataaaataatttagagattatattttagagatttt 869  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31837805 tgacataaaataatttagagattatattttagagatttt 31837767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 800 - 857
Target Start/End: Original strand, 46255090 - 46255145
Alignment:
Q  800 ggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 857  Q
    ||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  46255090 ggttttttacggattaaaataaaagtaatttt--cataaaataatttagagattatat 46255145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 928 - 986
Target Start/End: Complemental strand, 53130944 - 53130887
Alignment:
Q  928 aaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  53130944 aaataatttagtttgtttggatacaactatataaaag-agattttttgttacaaaatta 53130887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 801 - 857
Target Start/End: Original strand, 42881922 - 42881979
Alignment:
Q  801 gtttgttacggattaaaataaaagtga-ttttgacataaaataatttagagattatat 857  Q
    |||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  42881922 gtttgttatggattaaaataaaagtgatttttttcataaaataatttagagattatat 42881979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 804 - 863
Target Start/End: Complemental strand, 2494785 - 2494726
Alignment:
Q  804 tgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttaga 863  Q
    |||||| ||||||||||||||| ||||||| || |||||||||||  |||||||||||||    
T  2494785 tgttactgattaaaataaaagtaattttgatattaaataatttaggcattatattttaga 2494726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 801 - 854
Target Start/End: Complemental strand, 27271726 - 27271672
Alignment:
Q  801 gtttgttacggattaaaataaaag-tgattttgacataaaataatttagagatta 854  Q
    |||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||    
T  27271726 gtttgttacggattaaaataaaaaatgatttttacaaaaaataatttagagatta 27271672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 810 - 876
Target Start/End: Complemental strand, 40796305 - 40796239
Alignment:
Q  810 ggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||||||||||||||| |||||||||  ||||| |||| ||| ||| || |||||||||||||||||    
T  40796305 ggattaaaataaaagtaattttgacaacaaatattttaaagactattttatagagattttatgaaaa 40796239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 812 - 853
Target Start/End: Original strand, 11125146 - 11125187
Alignment:
Q  812 attaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  11125146 attaaaataaaagtaattttgacattaaataatttagagatt 11125187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 802 - 871
Target Start/End: Complemental strand, 17554964 - 17554896
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat 871  Q
    ||||||||  |||||||||||||||||||||| ||  ||||||||| ||||||| ||||| |||||||||    
T  17554964 tttgttacatattaaaataaaagtgattttgatattgaataatttaaagattat-ttttaaagattttat 17554896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 858 - 986
Target Start/End: Original strand, 50715607 - 50715737
Alignment:
Q  858 tttagagattttatgaaaa-tcaga-tctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 955  Q
    |||||||||||| |||||| ||||| |||||||| |||||| ||||| ||  |||||||||       |||||||||||||| ||||||||||||||       
T  50715607 tttagagattttgtgaaaaatcagaatctattttgcgtttgcttaccataagaaaaatcactttttctaaacaaataatttaatttgtttggatacacct 50715706  T
Q  956 ttataaaagaagattttttgttacaaaatta 986  Q
     ||||||||    ||||||||||||||||||    
T  50715707 atataaaagggatttttttgttacaaaatta 50715737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 820 - 876
Target Start/End: Complemental strand, 37813244 - 37813189
Alignment:
Q  820 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||| ||||||||||||  ||||||||||||||||| ||||||| ||||||||||||    
T  37813244 aaaaatgattttgacattcaataatttagagattat-ttttagatattttatgaaaa 37813189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 886 - 953
Target Start/End: Original strand, 29100784 - 29100851
Alignment:
Q  886 ttttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    |||| ||||||||||| ||| ||||| ||||       ||||||||||||||||||||||||||||||    
T  29100784 ttttgcgtttgtttactgtaataaaactcacttttttaaaacaaataatttagtttgtttggatacaa 29100851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 924 - 986
Target Start/End: Original strand, 44886171 - 44886233
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||||||||||||| |||||||||||   ||||||||    ||||||||||||||||||    
T  44886171 aaacaaataatttagtttttttggatacaactatataaaagggatttttttgttacaaaatta 44886233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 807 - 876
Target Start/End: Complemental strand, 53131054 - 53130984
Alignment:
Q  807 tacggattaaaataaaagtgattttgacataaaataatttagagatta-tattttagagattttatgaaaa 876  Q
    ||||||||||||||||| |||||||||| |  |||| ||||||||| | | ||||||||||||||| ||||    
T  53131054 tacggattaaaataaaattgattttgactttgaatattttagagatgatttttttagagattttataaaaa 53130984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 580 - 649
Target Start/End: Complemental strand, 4145328 - 4145259
Alignment:
Q  580 ctatagtatagcagaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtca 649  Q
    |||||| ||||||||||||||| |||| | ||||||||||  ||| |||||| | |||||||| ||||||    
T  4145328 ctatagcatagcagaatttgaacaaattgttattgttccaccatacgctattcagtacaaaatgttgtca 4145259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 803 - 836
Target Start/End: Original strand, 28450674 - 28450707
Alignment:
Q  803 ttgttacggattaaaataaaagtgattttgacat 836  Q
    |||||||| |||||||||||||||||||||||||    
T  28450674 ttgttacgaattaaaataaaagtgattttgacat 28450707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 6e-46; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 801 - 913
Target Start/End: Complemental strand, 7205023 - 7204909
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  7205023 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttacgtttgtt 7204924  T
Q  899 taccgtactaaaaat 913  Q
    ||||||| |||||||    
T  7204923 taccgtaataaaaat 7204909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 21980782 - 21980968
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtt 898  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||  |||||||    
T  21980782 gtttgttacagattaaaatataagttattttgacataaaataatttagagattatagtttagagattttatgaaaaatcaagatctattttgtgtttgtt 21980881  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| ||||||||||       ||||||||||| ||||||||||||||||||   |||||||| | |||||||||||||||||||    
T  21980882 taccgtaataaaaatcactttttttaaacaaataatgtagtttgtttggatacaactatataaaagga-attttttgttacaaaatta 21980968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 819 - 986
Target Start/End: Complemental strand, 2258901 - 2258733
Alignment:
Q  819 taaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa--tcagatctattttacgtttgtttaccgtactaaaaatcac 916  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |   ||||||||| ||||||||||||||| |||||||||     
T  2258901 taaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatttgaatctattttgcgtttgtttaccgtaataaaaatcat 2258802  T
Q  917 nnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
           ||||||||||| |||||||||| |||||||   |||||||| |||||||||||||||||||||    
T  2258801 ttgttttaaacaaataatctagtttgttttgatacaactatataaaag-agattttttgttacaaaatta 2258733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 26001463 - 26001281
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||| ||||| || || |||||| ||||||||    
T  26001463 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagat----ttttagagattttatgaaaaattagaatttattttgcgtttgtt 26001368  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || |||| ||||||||||       |||||||||||||||||| |||||||||||   |||||||| ||||||||||||| |||||||    
T  26001367 tatcgtaataaaaatcacttattttaaacaaataatttagtttatttggatacaactatataaaag-agattttttgttaaaaaatta 26001281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 809 - 990
Target Start/End: Complemental strand, 14094265 - 14094086
Alignment:
Q  809 cggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtac 906  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||| |||||||||  ||||||||| ||||     
T  14094265 cggattaaaataaaagtgattttgacataaaataatttagagattat-ttttagagattttaagaaaaatcagaatctattttgtgtttgtttatcgtaa 14094167  T
Q  907 taaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaattt 990  Q
    ||||||||||       ||  ||||||||||||||||||||||||||   ||||||||  |||||||||||| |||||||||||    
T  14094166 taaaaatcacctttttaaa--aaataatttagtttgtttggatacaactatataaaag-cgattttttgttataaaattaattt 14094086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 796 - 986
Target Start/End: Original strand, 33438534 - 33438724
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgt 893  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| ||||| || || |||||| |||    
T  33438534 ggctcgtttgtgacggattaaaataaaagtgattttgacacaaaataattttgagattatattttaaagattttatgaaaaattagaatttattttgcgt 33438633  T
Q  894 ttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||| || ||||||||||       ||||||||||||||||||||||| ||||||   |||||||| ||| ||||||||| |||||||    
T  33438634 ttgtttaccataataaaaatcactttttttaaacaaataatttagtttgtttgaatacaactatataaaag-aga-tttttgttaaaaaatta 33438724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 840 - 953
Target Start/End: Complemental strand, 3307522 - 3307407
Alignment:
Q  840 ataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataattta 937  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||||||  ||||||||| |||| ||||||||||       ||||||||||||||    
T  3307522 ataatttagagattacattttagagattttatgaaaaatcagaatctattttgtgtttgtttatcgtaataaaaatcactttgttaaaacaaataattta 3307423  T
Q  938 gtttgtttggatacaa 953  Q
    ||||||||||||||||    
T  3307422 gtttgtttggatacaa 3307407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 796 - 953
Target Start/End: Complemental strand, 20469532 - 20469387
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa-tcaga--tctattttacg 892  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||               |||||||||||||||| || ||  |||||||| ||    
T  20469532 ggctcgtttgttatggattaaaataaaagtgattttgacataaaataatt---------------agagattttatgaaaaatctgaattctattttgcg 20469448  T
Q  893 tttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    ||||||||||||  ||||||||||       ||||||||||||||||||||||||||||||    
T  20469447 tttgtttaccgtgataaaaatcactttttttaaacaaataatttagtttgtttggatacaa 20469387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 812 - 900
Target Start/End: Original strand, 21091898 - 21091987
Alignment:
Q  812 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgttta 900  Q
    ||||||||||| ||||||||| | |||| ||||||||||||||| || ||||||||||||| |||||||| ||||||||| ||||||||||    
T  21091898 attaaaataaatgtgattttggcttaaa-taatttagagattattttatagagattttatgaaaaatcagaatctattttgcgtttgttta 21091987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 801 - 855
Target Start/End: Original strand, 24007044 - 24007098
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 855  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  24007044 gtttgttacggattaaaataaaaatgatttggccataaaataatttagagattat 24007098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 804 - 847
Target Start/End: Complemental strand, 891192 - 891149
Alignment:
Q  804 tgttacggattaaaataaaagtgattttgacataaaataattta 847  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  891192 tgttacggattaaaataaaagtgattttcacataaaataattta 891149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 800 - 853
Target Start/End: Complemental strand, 10780374 - 10780321
Alignment:
Q  800 ggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||||| |||||||||||||| | |||||||||||||||| ||||||||||    
T  10780374 ggtttgttatggattaaaataaaaataattttgacataaaatattttagagatt 10780321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 805 - 876
Target Start/End: Complemental strand, 22533662 - 22533591
Alignment:
Q  805 gttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||||||| |||||||||||| | |||| |||||||||||||| ||||||| || |||||||  ||||||||    
T  22533662 gttacggaataaaataaaagttactttgccataaaataatttaaagattattttatagagatgctatgaaaa 22533591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 811 - 853
Target Start/End: Original strand, 26209020 - 26209062
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  26209020 gattaaaataaaagtgattttcacataaaatattttagagatt 26209062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 651
Target Start/End: Complemental strand, 5730236 - 5730197
Alignment:
Q  612 ttgttccatgataagctatttattacaaaatcttgtcaaa 651  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  5730236 ttgttccatgatatgctatttagtacaaaatcttgtcaaa 5730197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 811 - 876
Target Start/End: Complemental strand, 8116412 - 8116346
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagattatattt-tagagattttatgaaaa 876  Q
    |||||||| || ||| ||||||||||  ||||||||||||||||| ||| |||||||||||| ||||    
T  8116412 gattaaaaaaatagtaattttgacattcaataatttagagattatttttctagagattttataaaaa 8116346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 830 - 876
Target Start/End: Complemental strand, 26277634 - 26277588
Alignment:
Q  830 ttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||||||  ||||||||| ||||||| ||||||||||||||||||||    
T  26277634 ttgacattcaataatttaaagattattttttagagattttatgaaaa 26277588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 850
Target Start/End: Original strand, 5678842 - 5678875
Alignment:
Q  817 aataaaagtgattttgacataaaataatttagag 850  Q
    ||||||||| ||||||||||||||||||||||||    
T  5678842 aataaaagtaattttgacataaaataatttagag 5678875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 802 - 986
Target Start/End: Complemental strand, 21388631 - 21388446
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatca-gatctattttacgtttgttt 899  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||| |||||||    
T  21388631 tttgttacggattaaaatcaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcataatctattttacatttgttt 21388532  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||| || ||| ||||||       ||||||||||| ||||||||||||||||||   ||||||||  |||||||||||| |||||||    
T  21388531 accataataataatcactttttttaaacaaataatctagtttgtttggatacaactatataaaag-ggattttttgttataaaatta 21388446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 54356143 - 54356330
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||||    
T  54356143 gtttgttacggattaaagtaaaagtgattttgacattaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtt 54356242  T
Q  899 taccgtactaaaaatcac-nnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||| || ||||||||||        ||||||||||||||||||||||||||| ||   ||||||||  ||||||||||||||||||||    
T  54356243 taccataataaaaatcacttttttttaaacaaataatttagtttgtttggatataactatataaaag-ggattttttgttacaaaatta 54356330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 7433812 - 7433626
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||| || |||||||| ||||||||||||||||||    
T  7433812 gtttgttacggattaaaataaaagtaattttgacataaaataatttagagattatatcgtagagattttgtgaaaaatcagaatctattttacgtttgtt 7433713  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||| ||| |||||||||        ||||||||||| ||| ||||||||||||||   |||||||  | |||||||||||||||||||    
T  7433712 tactgtaataaaaatcaattttttaaaacaaataatctagcttgtttggatacaactatataaaatga-attttttgttacaaaatta 7433626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 8707893 - 8708079
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||||||    
T  8707893 gtttgttacaaattaaaaaaaaagtgattttcacataaaataatttagagattatattttatagattttgtgaaaaatcagaatctattttgcgtttgtt 8707992  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| ||||||||||       ||||||||||| | |||||||| |||||||   |||||||||| |||||||||||||||||||    
T  8707993 taccgtaataaaaatcaccttttttaaacaaataatcttgtttgttttgatacaactatataaaagaa-attttttgttacaaaatta 8708079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 9059780 - 9059966
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||||||    
T  9059780 gtttgttacaaattaaaaaaaaagtgattttcacataaaataatttagagattatattttatagattttgtgaaaaatcagaatctattttgcgtttgtt 9059879  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| ||||||||||       ||||||||||| | |||||||| |||||||   |||||||||| |||||||||||||||||||    
T  9059880 taccgtaataaaaatcaccttttttaaacaaataatcttgtttgttttgatacaactatataaaagaa-attttttgttacaaaatta 9059966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 801 - 983
Target Start/End: Complemental strand, 24485807 - 24485623
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg--aaaatcag-atctattttacgtttgt 897  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||  |||||||| |||||||||  ||||||    
T  24485807 gtttgttacagattaatataaaagtgattttgacataaaataatttttagattatattttagagattttatgaaaaaatcagaatctattttgtgtttgt 24485708  T
Q  898 ttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaa 983  Q
    |||||||| ||||||| ||       ||||||||||||||||||||||||||||||   |||||||  || |||||||||||||||    
T  24485707 ttaccgtaataaaaattacttttttaaaacaaataatttagtttgtttggatacaactatataaaa-taggttttttgttacaaaa 24485623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 801 - 953
Target Start/End: Complemental strand, 34795252 - 34795099
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  34795252 gtttgttacggattaaaataaaagtaattttgacgtaaaataatttagagattatattttagagattttatgaaaaatcagaatctattttacgtttgtt 34795153  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    ||| ||| |||||||||        ||||||||||| |||||||||| |||||||    
T  34795152 tacggtaataaaaatca-tttttttaaacaaataatctagtttgtttcgatacaa 34795099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 10332975 - 10333162
Alignment:
Q  801 gtttgttacggattaaaataaaagt-gattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgt 897  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| |||||||    
T  10332975 gtttgttacatattaaaataaaagttgattttgacataaaataatttagagattatattttagagattttataaaaaatcagaatctattttgcgtttgt 10333074  T
Q  898 ttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||| |||| ||||||||||       |||||| |||| |||||||||| |||||||   ||||||||  ||||||||||||||||||||    
T  10333075 ttagcgtaataaaaatcactttttttaaacaagtaatctagtttgtttagatacaactatataaaag-ggattttttgttacaaaatta 10333162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 801 - 950
Target Start/End: Complemental strand, 26863239 - 26863088
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| || ||||| ||| ||||||||    
T  26863239 gtttgttacggattaaaataaaagtgattttgacatcaaataatttagagattatattttagagattttgtgtaaaattagaatctactttgcgtttgtt 26863140  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggata 950  Q
    ||| ||| ||||||||||       ||||||||||| |||||||||||||||    
T  26863139 tactgtaataaaaatcactttttttaaacaaataatctagtttgtttggata 26863088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 813 - 986
Target Start/End: Complemental strand, 26168088 - 26167913
Alignment:
Q  813 ttaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcagatctattttacgtttgtttaccgtactaaaa 911  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| || |||| ||||||||||| |||  ||||    
T  26168088 ttaaaataaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatcaga-ctcttttgcgtttgtttacagtaacaaaa 26167990  T
Q  912 atcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaaga---ttttttgttacaaaatta 986  Q
    |||||       ||| ||||||||||||||||||||||||||   |||||||| |||   ||||||||||||||||||    
T  26167989 atcactttttttaaataaataatttagtttgtttggatacaactatataaaag-agatttttttttgttacaaaatta 26167913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 801 - 989
Target Start/End: Complemental strand, 40285254 - 40285066
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| || |||||||| |||| |||||||||||||    
T  40285254 gtttgttacggtttaaaataaaagtgattttgatataaaataatttagagattatattctagagattttgtgaaaaatcagaatctgttttacgtttgtt 40285155  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    ||||||| |||||||||          | ||||||| |||||| |||||||||||   |||||||| | ||||||||||||||||||||||    
T  40285154 taccgtaataaaaatca-tttttttttataaataatctagtttatttggatacaactatataaaagga-attttttgttacaaaattaatt 40285066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 11632938 - 11633125
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtt 898  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||| || |||||| | ||||||||| ||||||||    
T  11632938 gtttgttacggatttaaataaaagtgattttgacataaaataatttagagattatattttaagaattttgtgaaaaatcaaaatctattttgcgtttgtt 11633037  T
Q  899 taccgtactaaaaatca-cnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||| |||||||||         ||| ||||||| ||||||||||||||||||   |||||||| ||||||||| |||||||||||    
T  11633038 taccgtaataaaaatcatttttttttaaataaataatctagtttgtttggatacaactatataaaag-agattttttattacaaaatta 11633125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 3942787 - 3942604
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||| || ||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| |||||||||  |||||||    
T  3942787 gtttgttatgggttaaaatgaaagtgattttgacttaaaataatttagagattatattttagaga-tttatgaaaaatcagaatctattttgtgtttgtt 3942689  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||   ||||||||||       ||||||||||| ||||||||||| ||||||   ||||||||  ||||||||||||||||||||    
T  3942688 taccg--ataaaaatcactttttttaaacaaataatctagtttgtttgaatacaactatataaaag-ggattttttgttacaaaatta 3942604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 806 - 989
Target Start/End: Original strand, 26760446 - 26760629
Alignment:
Q  806 ttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtttaccg 903  Q
    |||||||||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||||  ||||| || ||||||||| |||||||||||||    
T  26760446 ttacggattaaattaaaagttattttgatgtaaaataatttagagattatattttagagattttatataaaattagaatctattttgcgtttgtttaccg 26760545  T
Q  904 tactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    |  ||||||| |        ||||||||||||||||||||||| ||||||   |||||||||| || |||||||| ||||||||||    
T  26760546 tggtaaaaatta-tttttttaaacaaataatttagtttgtttgaatacaactatataaaagaa-atattttgttaaaaaattaatt 26760629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 801 - 913
Target Start/End: Original strand, 12100937 - 12101051
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||| |||||||| || |||||||||||||||    
T  12100937 gtttgttacggattaaaataaaagtgattttgacataaaataatttaaaaattatattttagtaattttatgaaaaatcagaatttattttacgtttgtt 12101036  T
Q  899 taccgtactaaaaat 913  Q
     | |||| |||||||    
T  12101037 aatcgtaataaaaat 12101051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 796 - 986
Target Start/End: Original strand, 21459481 - 21459675
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatca-----gatctatttta 890  Q
    |||| |||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  || |      |||||||||     
T  21459481 ggctcgtttgttacatattaaaataaaagtgatttttacatcaaataatttagagattatattttagagattttatgattatgatgcataatctattttg 21459580  T
Q  891 cgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    | ||||||||||||  ||||||||||       |||||||||||||||||||| | | |||||   |||||||| | |||||||||||||||||||    
T  21459581 catttgtttaccgtgataaaaatcactttttttaaacaaataatttagtttgtgtaggtacaactatataaaagga-attttttgttacaaaatta 21459675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 801 - 915
Target Start/End: Complemental strand, 16106238 - 16106122
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||||| ||||| || ||||||||||||| |||||||| ||||||||| ||||||||    
T  16106238 gtttgttatggattaaaataaaagtgatttttccataaaataatttagatattattttatagagattttatgaaaaatcagaatctattttgcgtttgtt 16106139  T
Q  899 taccgtactaaaaatca 915  Q
    |||| || |||||||||    
T  16106138 taccctaataaaaatca 16106122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 801 - 902
Target Start/End: Original strand, 23027649 - 23027752
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt-ttatgaaaatcag-atctattttacgtttgtt 898  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||   |||||||| |||||||||| |||||||    
T  23027649 gtttgttacgaattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 23027748  T
Q  899 tacc 902  Q
    ||||    
T  23027749 tacc 23027752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 801 - 902
Target Start/End: Complemental strand, 44869174 - 44869071
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt-ttatgaaaatcag-atctattttacgtttgtt 898  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||   |||||||| |||||||||| |||||||    
T  44869174 gtttgttatggagtaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 44869075  T
Q  899 tacc 902  Q
    ||||    
T  44869074 tacc 44869071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 818 - 915
Target Start/End: Complemental strand, 47567954 - 47567855
Alignment:
Q  818 ataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtactaaaaatca 915  Q
    |||||||||| |||||||| |||||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||| ||| |||||    
T  47567954 ataaaagtgagtttgacatcaaataatttagaaattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttgccgtaataataatca 47567855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 801 - 877
Target Start/End: Complemental strand, 44077962 - 44077886
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaat 877  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||||||||| | ||||||||||| |||||||    
T  44077962 gtttgttacggattaaaataaaaatgatttagacataaaatattttagagattatttattagagattttgtgaaaat 44077886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 813 - 986
Target Start/End: Original strand, 45585980 - 45586161
Alignment:
Q  813 ttaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttac-------cg 903  Q
    ||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||| ||||| || || ||||||  ||||||||||        |    
T  45585980 ttaaaataaaagtgatttttacataaaataatttagagattactttatagagattttatgaaaaattagaatttattttgtgtttgtttacattttatag 45586079  T
Q  904 tactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || ||||||||||       ||||||||||||||||||||||| ||||||   |||||||| | |||||||||||||||||||    
T  45586080 taataaaaatcacctttttaaaacaaataatttagtttgtttgaatacaacaatataaaag-atattttttgttacaaaatta 45586161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 801 - 863
Target Start/End: Original strand, 10296972 - 10297034
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttaga 863  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  10296972 gtttgttacggattaaaataaaagagatttttacatataataatttagagattatattttaga 10297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 818 - 915
Target Start/End: Original strand, 30917638 - 30917737
Alignment:
Q  818 ataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa--tcagatctattttacgtttgtttaccgtactaaaaatca 915  Q
    ||||||||||||||| |||||||||||||| ||||||| || |||||||||||||||||  | | ||||||||| |||||||||| | || |||||||||    
T  30917638 ataaaagtgattttgtcataaaataatttatagattattttatagagattttatgaaaaattaaaatctattttccgtttgtttatcctaataaaaatca 30917737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 54142889 - 54142941
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  54142889 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagatt 54142941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 801 - 868
Target Start/End: Complemental strand, 10332923 - 10332856
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattt 868  Q
    ||||||||||||||||||||| |||||||||||| | ||| ||||||||||||||| |||||||||||    
T  10332923 gtttgttacggattaaaataacagtgattttgacctgaaacaatttagagattataatttagagattt 10332856  T

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Target: chr3; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 853 - 953
Target Start/End: Complemental strand, 54981766 - 54981664
Alignment:
Q  853 tatattttagagattttatgaaaa-tcaga-tctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggata 950  Q
    |||| |||||||| |||||||||| ||||| |||||||| ||||||||||||||| ||||||||||       |||||||||||||||||||||| ||||    
T  54981766 tataatttagagactttatgaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcactttttttaaacaaataatttagtttgttttgata 54981667  T
Q  951 caa 953  Q
    |||    
T  54981666 caa 54981664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 801 - 914
Target Start/End: Complemental strand, 23027990 - 23027884
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtt 898  Q
    |||||||||||| |||||||||||||||         |||||||||||||||||||||||| ||||||| || |||||| | |||||||||| |||||||    
T  23027990 gtttgttacggactaaaataaaagtgat---------aaataatttagagattatattttaaagattttgtgaaaaatcaaaatctattttatgtttgtt 23027900  T
Q  899 taccgtactaaaaatc 914  Q
    ||||||| ||||||||    
T  23027899 taccgtaataaaaatc 23027884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 801 - 876
Target Start/End: Complemental strand, 25250518 - 25250443
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||| ||| |||||| |  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  25250518 gtttgttaccgataaaaatatagctgattttgatataaaataatttagagattattttttagagattatatgaaaa 25250443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 801 - 863
Target Start/End: Original strand, 10309608 - 10309670
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttaga 863  Q
    |||||||||| |||||||||||||  ||||| ||||| |||||||||||||||||||||||||    
T  10309608 gtttgttacgaattaaaataaaaggaatttttacatataataatttagagattatattttaga 10309670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 857 - 986
Target Start/End: Original strand, 54981819 - 54981948
Alignment:
Q  857 ttttagagattttatgaaaa-tcaga-tctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaa 954  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||||| ||| ||||| ||||       ||||||||||| |||||||||| |||||||     
T  54981819 ttttagagattttatgaaaaatcagaatctattttgcgtttgtttacagtaataaaa-tcaccttttttaaacaaataatctagtttgttttgatacaac 54981917  T
Q  955 cttataaaagaagattttttgttacaaaatta 986  Q
      |||||||   ||||||||||||||||||||    
T  54981918 tatataaaa-cggattttttgttacaaaatta 54981948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 802 - 847
Target Start/End: Original strand, 33832703 - 33832748
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataattta 847  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  33832703 tttgttacgaattaaaataaaagtgaatttgacataaaataattta 33832748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 924 - 986
Target Start/End: Complemental strand, 24842568 - 24842508
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||||||||||||||||||||||||   |||||||||   ||||||||||||||||||    
T  24842568 aaacaaataatttagtttgtttggatacaactatataaaaga--gttttttgttacaaaatta 24842508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 806 - 844
Target Start/End: Original strand, 46514887 - 46514925
Alignment:
Q  806 ttacggattaaaataaaagtgattttgacataaaataat 844  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  46514887 ttacggattaaaataaaaatgattttgacataaaataat 46514925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 934 - 986
Target Start/End: Original strand, 10297423 - 10297474
Alignment:
Q  934 tttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||||||| ||||||||  ||||||||| ||||||||||||||||||||    
T  10297423 tttagtttgttttgatacaaatatataaaaga-gattttttgttacaaaatta 10297474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 820 - 876
Target Start/End: Complemental strand, 14900532 - 14900476
Alignment:
Q  820 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||| ||||||||||||   |||||||||||||||| ||||||||| ||||||||||    
T  14900532 aaaaatgattttgacattctataatttagagattattttttagagactttatgaaaa 14900476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 801 - 852
Target Start/End: Complemental strand, 23302124 - 23302073
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagat 852  Q
    ||||||||||||||| ||||||| ||||||||| ||  ||||||||||||||    
T  23302124 gtttgttacggattagaataaaaatgattttgagattcaataatttagagat 23302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 935 - 989
Target Start/End: Original strand, 33832809 - 33832862
Alignment:
Q  935 ttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    |||||||||||||||||||   ||||||||| |||||||||| ||||||||||||    
T  33832809 ttagtttgtttggatacaactatataaaaga-gattttttgtcacaaaattaatt 33832862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 804 - 850
Target Start/End: Complemental strand, 40459909 - 40459863
Alignment:
Q  804 tgttacggattaaaataaaagtgattttgacataaaataatttagag 850  Q
    |||||| ||||||||||||| ||||||||||||  ||||||||||||    
T  40459909 tgttacagattaaaataaaaatgattttgacattgaataatttagag 40459863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 925 - 983
Target Start/End: Original strand, 42583594 - 42583651
Alignment:
Q  925 aacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaa 983  Q
    |||||||||||||||||||||| ||||||   |||||||| ||||||||||||| ||||    
T  42583594 aacaaataatttagtttgtttgaatacaactatataaaag-agattttttgttataaaa 42583651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 928 - 989
Target Start/End: Original strand, 3789734 - 3789794
Alignment:
Q  928 aaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    |||| |||||||||||||||||||||   ||||||||   ||||||||||||||||||||||    
T  3789734 aaattatttagtttgtttggatacaattatataaaag-ttattttttgttacaaaattaatt 3789794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 924 - 953
Target Start/End: Complemental strand, 10297295 - 10297266
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaa 953  Q
    ||||||||||||||||||||||||||||||    
T  10297295 aaacaaataatttagtttgtttggatacaa 10297266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 802 - 835
Target Start/End: Complemental strand, 30498646 - 30498613
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgaca 835  Q
    ||||||||| ||||||||||||||||||||||||    
T  30498646 tttgttacgaattaaaataaaagtgattttgaca 30498613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 801 - 850
Target Start/End: Original strand, 42583484 - 42583533
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagag 850  Q
    |||||||||  |||||||||||||||||||||| || ||||| |||||||    
T  42583484 gtttgttacacattaaaataaaagtgattttgatatgaaatagtttagag 42583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 9e-45; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 790 - 953
Target Start/End: Complemental strand, 44434912 - 44434747
Alignment:
Q  790 attaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctatt 887  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || |||||||    
T  44434912 attaagggctagtttgttacatattaaaataaaagtgattttgacataaaataatatagagattatattttagagattttatgaaaaattagaatctatt 44434813  T
Q  888 ttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    ||  |||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||    
T  44434812 ttgtgtttgtttaccgtaataaaaatcacttttttaaaacaaataatttagtttgtttggatacaa 44434747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 796 - 986
Target Start/End: Original strand, 24689209 - 24689401
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgt 893  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||| |||    
T  24689209 ggcttgtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttctgaaaaatcagaatttattttgcgt 24689308  T
Q  894 ttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaaga-agattttttgttacaaaatta 986  Q
    ||| ||||| || ||||||||||       ||||||||||| ||||||||||||||||||   ||||||||| |  ||||||||||||||||||    
T  24689309 ttgcttaccctaataaaaatcac-ttttttaaacaaataatctagtttgtttggatacaactatataaaagagattttttttgttacaaaatta 24689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 33858216 - 33858029
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatta-tattttagagattttatg-aaaatcag-atctattttacgtttgt 897  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||| || |||||| | |||||    
T  33858216 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatttttttagagattttatgaaaaatcagaatttattttgcctttgt 33858117  T
Q  898 ttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||| |||| ||||||||||       ||||||||||||| |||| |||||||||||   |||||||| ||||||||||||| |||||||    
T  33858116 ttatcgtaataaaaatcacttattttaaacaaataattttgtttatttggatacaactatataaaag-agattttttgttaaaaaatta 33858029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 21697010 - 21696825
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtt 898  Q
    |||||||||||| |||||||||| ||||||| ||||||||| ||| |||||||||||||||||||||| ||  |||||||| ||||||||||||||||||    
T  21697010 gtttgttacggactaaaataaaattgattttcacataaaatcattaagagattatattttagagatttaataaaaaatcagaatctattttacgtttgtt 21696911  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||  | ||||||||||       |||||||||||||| ||||||| |||||||   |||||||| |||||||||||||||||||||    
T  21696910 taccacaataaaaatcactttttttaaacaaataatttactttgttt-gatacaactatataaaag-agattttttgttacaaaatta 21696825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 801 - 904
Target Start/End: Original strand, 1644408 - 1644513
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatca-gatctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||| ||||||||    
T  1644408 gtttgttacggattaaaataaaagtgattttgacataaaataatttaaagattatattttagagattttatgaaaaatcataatctattttgcgtttgtt 1644507  T
Q  899 taccgt 904  Q
    | ||||    
T  1644508 tcccgt 1644513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 801 - 876
Target Start/End: Complemental strand, 47222726 - 47222651
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47222726 gtttgttacggattaaaataaaagtgattttcacataaaataatttagagattatattttagagattttatgaaaa 47222651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 4399534 - 4399720
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa-tcaga-tctattttacgtttgtt 898  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||  |||| ||||||||||||||| ||||| ||||||||  ||| |||    
T  4399534 gtttgttacggattaaaacaaaagtgattttgatataaaataatttagagattaattttttgagattttatgaaaaatcagaatctattttgtgtt-gtt 4399632  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || | || ||||||||||       ||| ||||||||||||||||||||||||||   |||||||| |  |||||| |||||||||||    
T  4399633 tatcttaataaaaatcactttttctaaaaaaataatttagtttgtttggatacaactatataaaagcaattttttttttacaaaatta 4399720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 788 - 989
Target Start/End: Complemental strand, 23809165 - 23808963
Alignment:
Q  788 aaattaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaa-aatca-gatcta 885  Q
    ||||||| || | |||| |||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| |  |||||    
T  23809165 aaattaagggttcgtttcttacagattaaaataaaagttattttgacataaaataatttatagattatattttagagattttatgaataattataatcta 23809066  T
Q  886 ttttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatt 985  Q
    ||    |||||||||||| | ||||||||||       ||||||||||||||||||  ||||||||||   ||||||||  ||||||| |||||||||||    
T  23809065 ttcagtgtttgtttaccgcaataaaaatcaccttttttaaacaaataatttagtttagttggatacaactatataaaag-ggatttttcgttacaaaatt 23808967  T
Q  986 aatt 989  Q
    ||||    
T  23808966 aatt 23808963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 802 - 912
Target Start/End: Original strand, 26970594 - 26970707
Alignment:
Q  802 tttgttacggattaaaataaaagtgattt-tgacataaaataatttagagattatattttagagattttatga-aaatcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||  |||||||    
T  26970594 tttgttacggattaaaataaaagtgatttattacataaaataatttagagattatattttagagattttatgataaatcagaatctattttgtgtttgtt 26970693  T
Q  899 taccgtactaaaaa 912  Q
    || |||| ||||||    
T  26970694 tatcgtaataaaaa 26970707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 801 - 902
Target Start/End: Original strand, 15640242 - 15640345
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  15640242 gtttgttacagattaaaataaaagtgattttcacgtaaaataaattagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 15640341  T
Q  899 tacc 902  Q
    ||||    
T  15640342 tacc 15640345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 840 - 986
Target Start/End: Complemental strand, 26246807 - 26246660
Alignment:
Q  840 ataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataattta 937  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||||||| |||||||||||| || |||||| |||       ||||||||||| ||    
T  26246807 ataatttagagattatattttagagattttataaaaaatcagaatctattttgcgtttgtttaccataataaaaaacactttttgtaaacaaataatcta 26246708  T
Q  938 gtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
     |||||||||||||||  ||||||||| |||||||||||||||||||||    
T  26246707 atttgtttggatacaactttataaaag-agattttttgttacaaaatta 26246660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 849 - 986
Target Start/End: Complemental strand, 5801215 - 5801076
Alignment:
Q  849 agattatattttagagattttatgaaaa-tcaga-tctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttg 946  Q
    |||||||||||||||||||||||||||| | ||| ||||||||  |||||||||||||| ||||||||||       |||||||||||||||||||||||    
T  5801215 agattatattttagagattttatgaaaaattagaatctattttgtgtttgtttaccgtaataaaaatcactttttttaaacaaataatttagtttgtttg 5801116  T
Q  947 gatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||   |||||||||   ||||||||||||||||||    
T  5801115 gatacaactatataaaagagatttttttgttacaaaatta 5801076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 801 - 867
Target Start/End: Original strand, 22644703 - 22644769
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt 867  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22644703 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagatt 22644769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 801 - 953
Target Start/End: Original strand, 35526354 - 35526505
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| || |||||    
T  35526354 gtttgtttcggattaaaataaaagtgattta-acataaaataatttagagattatattttagagattttatgaaaaatcagaatctaatttgcgattgtt 35526452  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
     || ||  ||||||  ||       ||||||||||||||||||||||||||||||    
T  35526453 gactgtgataaaaa--acattttttaaacaaataatttagtttgtttggatacaa 35526505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 801 - 916
Target Start/End: Original strand, 28974816 - 28974933
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatc-ag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||||||||||||| | || |||||||||  |||||||    
T  28974816 gtttgttacggattaaaataaaattcattttgacataaaacaatttagagattattttttagagattttatgaaaaactagaatctattttgtgtttgtt 28974915  T
Q  899 taccgtactaaaaatcac 916  Q
    | || || ||||||||||    
T  28974916 ttccataataaaaatcac 28974933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 801 - 916
Target Start/End: Complemental strand, 15641211 - 15641094
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||| |||||||| |||||||||  |||||||    
T  15641211 gtttgttacagtttaaaataaaagtgattttgacatcaaataatttagagattattttctagagattttatgaaaaatcagaatctattttgtgtttgtt 15641112  T
Q  899 taccgtactaaaaatcac 916  Q
    |  ||||  |||||||||    
T  15641111 ttgcgtagaaaaaatcac 15641094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 30122122 - 30121950
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcaga-tctattttacgtttgttt 899  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||      ||       ||||||||| ||||||||  ||||||||    
T  30122122 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattttat------ga-------aaaatcagaatctattttgtgtttgttt 30122036  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||| || ||||||||||       ||||||||||||||||||||||||||||||   ||||||| |  |||||||||||||||||||    
T  30122035 accataataaaaatcactttgttaaaacaaataatttagtttgtttggatacaactatataaaa-agaattttttgttacaaaatta 30121950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 811 - 953
Target Start/End: Complemental strand, 45447787 - 45447644
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatc-agatctattttacgtttgtttaccgtacta 908  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||| |||||| | ||| |||||  ||||||||||| |  ||    
T  45447787 gattaaaataaaagtgattttaacataaaataatctagagattatattttagtgattttatgaaaaatcaaaatccattttgtgtttgtttaccattata 45447688  T
Q  909 aaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    |||||||        ||||||||||| ||||||||||||||||||    
T  45447687 aaaatca-tttttttaaacaaataatatagtttgtttggatacaa 45447644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 801 - 867
Target Start/End: Original strand, 29102551 - 29102617
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt 867  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  29102551 gtttgttacggattaaaataaaattgattttgacataaaataatttagagattatttttcagagatt 29102617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 807 - 914
Target Start/End: Complemental strand, 37986206 - 37986099
Alignment:
Q  807 tacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgtttaccgt 904  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||||| |||||||||||||||  |||||||| ||||||||| |||||| |||||||    
T  37986206 tacggattaaaataa--gtgattttgacattgaataatttagagattattttttagagattttataaaaaatcagaatctattttgcgtttgcttaccgt 37986109  T
Q  905 actaaaaatc 914  Q
    | ||||||||    
T  37986108 aataaaaatc 37986099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 810 - 981
Target Start/End: Complemental strand, 14312667 - 14312497
Alignment:
Q  810 ggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttta-tgaaaatcag-atctattttacgtttgtttaccgtact 907  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||| |||||||||||||| | ||||| || ||||||||| ||||||||||||| | |    
T  14312667 ggattaaaataaaagtgatttttatataaa-taatttagagattattttttagagattttattaaaaataagaatctattttgcgtttgtttaccgcaat 14312569  T
Q  908 aaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaa 981  Q
    |||||| |        |||||||||||||| ||||||| |||||||   ||||||| | |||||||||||||||    
T  14312568 aaaaatta-ttttttaaaacaaataatttaatttgtttagatacaactatataaaa-aggattttttgttacaa 14312497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 35223674 - 35223726
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35223674 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 35223726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 801 - 876
Target Start/End: Original strand, 30122259 - 30122334
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||||| |||||| |||||||||||||    
T  30122259 gtttgttacagattaaaataaaagtaattttgacataaaatcatttagaaattattttttagggattttatgaaaa 30122334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 806 - 876
Target Start/End: Original strand, 19611022 - 19611091
Alignment:
Q  806 ttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || |||||||||||||||||    
T  19611022 ttacggattaaaataaa-gtggttttgacataaaataatttagagattattttatagagattttatgaaaa 19611091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 23640960 - 23640789
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcag-atctattttacgtttgttt 899  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||              ||||||||||||| |||||||||  | ||||||    
T  23640960 gtttgttgcagattaaaataaaagtgattttgacataaaataatttagagatt--------------ttatgaaaatcagaatctattttgtgcttgttt 23640875  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||| || ||||||||||       |||||||||||||| |||| ||||||||||   |||||||| ||||||||| |||||||||||    
T  23640874 accataataaaaatcacttttttaaaacaaataatttaatttggttggatacaactctataaaag-agatttttttttacaaaatta 23640789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 801 - 951
Target Start/End: Complemental strand, 10282685 - 10282547
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcag-atctattttacgtttgttt 899  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    ||         |||||||| ||||||||| |||||||||    
T  10282685 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattttat----ga---------aaaatcagaatctatttttcgtttgttt 10282599  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatac 951  Q
    | |||| ||||||||||       ||||||||||| ||||||||||||||||    
T  10282598 atcgtaataaaaatcactatttttaaacaaataatctagtttgtttggatac 10282547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 24162379 - 24162207
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcaga-tctattttacgtttgttt 899  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||| |||      ||       ||||||||| |||||||| | |||||||    
T  24162379 gtttgttacatattaaaataaaagtgattttgacataaaataatttagagattttat------ga-------aaaatcagaatctattttgcatttgttt 24162293  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||| ||||||| ||       ||||||||||| |||||||||||||| ||    |||||||| |||||||||||||||||||||    
T  24162292 accgtaataaaaataactttttttaaacaaataatctagtttgtttggatgcatctatataaaag-agattttttgttacaaaatta 24162207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 811 - 870
Target Start/End: Complemental strand, 10282888 - 10282829
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttta 870  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  10282888 gattaaaataaaagtgattttgacattgaataatttagagattattttttagagatttta 10282829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 801 - 876
Target Start/End: Complemental strand, 26178247 - 26178172
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||||||| |||||||||||||||| ||||| || |||||| ||||| ||||||| ||||||||||||||||||||    
T  26178247 gtttgttatggattaaaataaaagtcattttcacgtaaaattatttatagattattttttagagattttatgaaaa 26178172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 810 - 876
Target Start/End: Original strand, 12216852 - 12216918
Alignment:
Q  810 ggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||| ||||    
T  12216852 ggattaaaataaaagtgattttgatattgaataatttagagattatgttttagagattttataaaaa 12216918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 801 - 855
Target Start/End: Original strand, 15640424 - 15640478
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 855  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  15640424 gtttgttacagattaaaataaaagtgattttgacataaaataatttatagattat 15640478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 796 - 853
Target Start/End: Original strand, 11485838 - 11485895
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  11485838 ggctcgtttgttaaggattaaaataaaagtgattttgacataaattaatttagagatt 11485895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 801 - 856
Target Start/End: Complemental strand, 1644823 - 1644768
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattata 856  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  1644823 gtttgttacggattaaaataaaattgatttttatataaaataatttagagattata 1644768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 853 - 986
Target Start/End: Complemental strand, 24688954 - 24688820
Alignment:
Q  853 tatattttagagattttatgaaaa-tcaga-tctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggata 950  Q
    ||||||||||||||||||| |||| | ||| |||||||| ||||||||||||||  ||||||||||       ||||||||||||||||||||| | |||    
T  24688954 tatattttagagattttataaaaaattagaatctattttgcgtttgtttaccgtgataaaaatcactttttttaaacaaataatttagtttgttcgaata 24688855  T
Q  951 caaacttataaaagaagattttttgttacaaaatta 986  Q
    |||   ||||||| | ||||||||||||| ||||||    
T  24688854 caactatataaaa-atgattttttgttaccaaatta 24688820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 843 - 938
Target Start/End: Complemental strand, 24689711 - 24689614
Alignment:
Q  843 atttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttag 938  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||  ||| ||||||||||       |||||||||||||||    
T  24689711 attttgagattatattttagagattttatgaaaaatcagaatctattttacgtttatttattgtaataaaaatcacttttttaaaacaaataatttag 24689614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 868
Target Start/End: Complemental strand, 35526833 - 35526765
Alignment:
Q  801 gtttgttacgg-attaaaataaaagtgattttgacataaaataatttagagattatattttagagattt 868  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||| ||||||| || |||||||||    
T  35526833 gtttgttacgggattaaaataatactgattttgacataaaataatttatagattattttatagagattt 35526765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 802 - 852
Target Start/End: Complemental strand, 4594710 - 4594660
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagat 852  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  4594710 tttgttatggattaaaataaaagtgattttaacataaaataatttaaagat 4594660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 803 - 853
Target Start/End: Original strand, 32988467 - 32988517
Alignment:
Q  803 ttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  32988467 ttgttatggattaaaataaaagtgattttgatattaaataatttagagatt 32988517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 924 - 986
Target Start/End: Original strand, 38319943 - 38320004
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||||| ||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  38319943 aaacaaataatctagtttgtttggatacaactatataaaag-agattttttgttacaaaatta 38320004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 588 - 662
Target Start/End: Complemental strand, 38622946 - 38622872
Alignment:
Q  588 tagcagaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtcaaacagcggctata 662  Q
    |||||||||||||| |||| | |||||||||||||||  |||||||  ||||||| |||||||| ||||||||||    
T  38622946 tagcagaatttgaataaatcgatattgttccatgatacactatttagcacaaaatgttgtcaaatagcggctata 38622872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 801 - 912
Target Start/End: Complemental strand, 26151391 - 26151279
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||| || |||||||||||| ||||||||| ||||||||| ||||||||||| | |||||| ||||||||| ||||| || |||| |||| ||| ||||    
T  26151391 gtttgatatggattaaaataagagtgattttcacataaaattatttagagatt-ttttttagtgattttatgtaaaattagaatctgttttgcgtatgtt 26151293  T
Q  899 taccgtactaaaaa 912  Q
    |||| || ||||||    
T  26151292 taccataataaaaa 26151279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 812 - 853
Target Start/End: Original strand, 38319868 - 38319909
Alignment:
Q  812 attaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  38319868 attaaaataaaagtgattttcacataaaataatttagagatt 38319909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 802 - 900
Target Start/End: Complemental strand, 26127935 - 26127835
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaatcag-atctattttacgtttgttt 899  Q
    ||||||| |||||||||||||| |  |||| | ||||||| ||||||||||||  |||||||||||||||  |||||||| |||||||||  ||||||||    
T  26127935 tttgttatggattaaaataaaaatagttttcatataaaattatttagagattaatttttagagattttataaaaaatcagaatctattttgtgtttgttt 26127836  T
Q  900 a 900  Q
    |    
T  26127835 a 26127835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 805 - 857
Target Start/End: Original strand, 29854560 - 29854612
Alignment:
Q  805 gttacggattaaaataaaagtgattttgacataaaataatttagagattatat 857  Q
    ||||| ||||||||||||||| |||||||| |||||||||||| |||||||||    
T  29854560 gttacagattaaaataaaagtaattttgacgtaaaataatttaaagattatat 29854612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 31277316 - 31277368
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||| ||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  31277316 gtttattatggattaaaataaaaatgattttggcataaaataatttagagatt 31277368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 809 - 876
Target Start/End: Original strand, 10282986 - 10283053
Alignment:
Q  809 cggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||||||||||||||||| ||||  ||||||||| | ||||| ||||||||||| ||| ||||    
T  10282986 cggattaaaataaaagtgattttcacattgaataatttataaattattttttagagattatataaaaa 10283053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 882 - 953
Target Start/End: Original strand, 11485913 - 11485984
Alignment:
Q  882 tctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 953  Q
    |||||||| ||||||||||||||  ||||||| ||       ||||||||||||||||||||||||||||||    
T  11485913 tctattttgcgtttgtttaccgtgataaaaattactttttttaaacaaataatttagtttgtttggatacaa 11485984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 924 - 986
Target Start/End: Complemental strand, 26970509 - 26970448
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||||||||||||||||||||||||   ||| ||| | ||||||||||||||||||||    
T  26970509 aaacaaataatttagtttgtttggatacaactatatgaaa-atgattttttgttacaaaatta 26970448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 924 - 986
Target Start/End: Original strand, 40261908 - 40261969
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||||||||||||||||||||||||   ||||||| | | ||||||||||||||||||    
T  40261908 aaacaaataatttagtttgtttggatacaactatataaaa-agggttttttgttacaaaatta 40261969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 924 - 986
Target Start/End: Complemental strand, 47222633 - 47222571
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||||||||| |||||||||||| ||   |||||||  |||||||||||||||||||||    
T  47222633 aaacaaataatttaatttgtttggatataactatataaaaagagattttttgttacaaaatta 47222571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 805 - 842
Target Start/End: Complemental strand, 1067247 - 1067210
Alignment:
Q  805 gttacggattaaaataaaagtgattttgacataaaata 842  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  1067247 gttacggattaaaataaaagtgattttcacataaaata 1067210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 816 - 911
Target Start/End: Original strand, 11749931 - 11750027
Alignment:
Q  816 aaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatca-gatctattttacgtttgtttaccgtactaaaa 911  Q
    |||||||||||||||||| || ||| || ||||| ||||  |||||||||||||||| |||||||  ||||||||| | |||||||| ||||||||||    
T  11749931 aaataaaagtgattttgatattaaagaacttagatatta-cttttagagattttatgtaaaatcataatctattttgcatttgtttatcgtactaaaa 11750027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 820 - 872
Target Start/End: Original strand, 16174944 - 16174996
Alignment:
Q  820 aaaagtgattttgacataaaataatttagagattatattttagagattttatg 872  Q
    |||| ||||||||||||  ||||||||||||||||| ||||||||| ||||||    
T  16174944 aaaaatgattttgacatttaataatttagagattattttttagagactttatg 16174996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 844 - 876
Target Start/End: Original strand, 40261848 - 40261880
Alignment:
Q  844 tttagagattatattttagagattttatgaaaa 876  Q
    |||||||||||||||||||||||||||||||||    
T  40261848 tttagagattatattttagagattttatgaaaa 40261880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 928 - 986
Target Start/End: Original strand, 21696475 - 21696531
Alignment:
Q  928 aaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||| ||||||||||||||||||||   ||||||||  ||||||||||||||||||||    
T  21696475 aaatagtttagtttgtttggatacaactatataaaag--gattttttgttacaaaatta 21696531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 916
Target Start/End: Complemental strand, 38087924 - 38087815
Alignment:
Q  806 ttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcag-atctattttacgtttgtttaccgt 904  Q
    ||||||| |||||||||||||||||| ||||  ||| |||||| |||||| |||||||||   ||| ||||| || |||||||||| ||||||||| |||    
T  38087924 ttacggactaaaataaaagtgatttttacat-gaatcatttagtgattattttttagaga-agtataaaaattagaatctattttatgtttgtttatcgt 38087827  T
Q  905 actaaaaatcac 916  Q
      ||||||||||    
T  38087826 gataaaaatcac 38087815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 924 - 986
Target Start/End: Complemental strand, 10283394 - 10283333
Alignment:
Q  924 aaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||||||||||||||||| ||||||    ||||||||  ||||||||||||||||||||    
T  10283394 aaacaaataatttagtttgtttcgatacagctatataaaag-ggattttttgttacaaaatta 10283333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 802 - 844
Target Start/End: Complemental strand, 15641701 - 15641659
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataat 844  Q
    |||||||  ||||||||||||| ||||||||||||||||||||    
T  15641701 tttgttattgattaaaataaaaatgattttgacataaaataat 15641659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 813 - 876
Target Start/End: Original strand, 29834466 - 29834531
Alignment:
Q  813 ttaaaataaaagtgattttgacataaaataatttagagatta--tattttagagattttatgaaaa 876  Q
    ||||||||||||| | |||||  |||||||||||||||||||  | ||||||||||||||| ||||    
T  29834466 ttaaaataaaagtaagtttgaggtaaaataatttagagattatttcttttagagattttattaaaa 29834531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 804 - 842
Target Start/End: Original strand, 35527349 - 35527387
Alignment:
Q  804 tgttacggattaaaataaaagtgattttgacataaaata 842  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  35527349 tgttacagattaaaataaaagtgattttgccataaaata 35527387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 1e-43; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 801 - 989
Target Start/End: Original strand, 14787075 - 14787265
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||||    
T  14787075 gtttgttactaattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatcagaatctattttgcgtttgtt 14787174  T
Q  899 taccgtactaaaaatca-cnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    ||||||| |||||||||         ||||||||||| || |||||||||||||||   | |||||| ||||||||||||||||||||||||    
T  14787175 taccgtaataaaaatcattttcttttaaacaaataatctaatttgtttggatacaactatctaaaag-agattttttgttacaaaattaatt 14787265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 801 - 945
Target Start/End: Original strand, 31667387 - 31667533
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  31667387 gtttgttaaggattaaaataaaagtgatttcgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 31667486  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgttt 945  Q
    ||||||  ||||||||||       ||||||||||||||||||||||    
T  31667487 taccgtgataaaaatcactttttttaaacaaataatttagtttgttt 31667533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 796 - 914
Target Start/End: Complemental strand, 24545854 - 24545734
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgt 893  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||    
T  24545854 ggctcgtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgt 24545755  T
Q  894 ttgtttaccgtactaaaaatc 914  Q
    ||||||||| || ||||||||    
T  24545754 ttgtttaccataataaaaatc 24545734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 802 - 986
Target Start/End: Original strand, 42676341 - 42676526
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgttt 899  Q
    |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||||    
T  42676341 tttgttacagaataaaataaaagtgattttgacataaaagaatttagagattatatttttgagattttatgaaaaatcagaatctattttgcgtttgttt 42676440  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    | |||| ||||||||||       ||||||| ||| ||||||||||| ||||||   ||||||||  ||||||||||||||||||||    
T  42676441 atcgtaataaaaatcactttttttaaacaaaaaatctagtttgtttgcatacaactatataaaag-ggattttttgttacaaaatta 42676526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 21479281 - 21479468
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcag--atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||   |  ||||||||| ||||||||    
T  21479281 gtttgttacggattaaaataaaattgattctgacataaaataatttagagattatattttagagattttaagaaaaatgggaatctattttgcgtttgtt 21479380  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagatttttt-gttacaaaatta 986  Q
    ||||||  ||||||||||       ||||||||||| ||||||||||||||||||   ||||||||  |||||||| ||||||||||||    
T  21479381 taccgtggtaaaaatcactttttgtaaacaaataatctagtttgtttggatacaactatataaaag-ggattttttcgttacaaaatta 21479468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 15458820 - 15459007
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgtttgtt 898  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||||||||  |||||||    
T  15458820 gtttgttatagattaaaataaaagtgattttgacattaaataatttagagattattttttagagattttatgaaaaatcagaatctattttgagtttgtt 15458919  T
Q  899 taccgtactaaaaatc-acnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||| ||| | |||||| ||       ||||||||||||| ||||||||||||||||   ||||||||  ||||||||||||||||||||    
T  15458920 tactgtaatgaaaatctactttttttaaacaaataatttggtttgtttggatacaactatataaaag-tgattttttgttacaaaatta 15459007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 801 - 901
Target Start/End: Complemental strand, 34454102 - 34454000
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaa-atcag-atctattttacgtttgtt 898  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||    
T  34454102 gtttgttacggattaaaataaaagtgattttaacataaaataatttagagattatattttagagattttatgaaagatcagaatctattttgcatttgtt 34454003  T
Q  899 tac 901  Q
    |||    
T  34454002 tac 34454000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 796 - 914
Target Start/End: Complemental strand, 36950553 - 36950433
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgt 893  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || || |||||| |||    
T  36950553 ggctcgttagttacagattaaaataaaagtgattttgacataaaataatttagagattatattttaaagattttatgaaaaattagaatttattttgcgt 36950454  T
Q  894 ttgtttaccgtactaaaaatc 914  Q
    || ||||||||| ||||||||    
T  36950453 ttttttaccgtaataaaaatc 36950433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 801 - 986
Target Start/End: Original strand, 9420132 - 9420319
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattata-ttttagagattttatg-aaaatcag-atctattttacgtttgt 897  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  |||||||| |||||||||||||||| |||||||| ||||||||| ||||| |    
T  9420132 gtttgttacggattaaaataaaagtgattttgacattaaataatttgaagattatatttttagagattttatgaaaaatcagaatctatttttcgttt-t 9420230  T
Q  898 ttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||| | ||||||||||       ||| ||||| |||| |||||||||||||||   |||||||     ||||||||||||||||||    
T  9420231 ttaccgcaataaaaatcactttttttaaataaatattttaatttgtttggatacaactatataaaatggatttttttgttacaaaatta 9420319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 801 - 876
Target Start/End: Original strand, 38722726 - 38722801
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38722726 gtttattacggattaaaataaaaatgattttgatataaaataatttagagattatattttagagattttatgaaaa 38722801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 801 - 952
Target Start/End: Original strand, 37201527 - 37201679
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatca-gatctattttacgtttgtt 898  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| || |||||||  |||||||||  |||||||    
T  37201527 gttttttacggattaaa-taaaagtgattttgacataaaataatttagagattattttttggagattttgtgaaaaatcacaatctattttgtgtttgtt 37201625  T
Q  899 taccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggataca 952  Q
    |||| || ||| ||||||       |||  ||||||||||||||||||||||||    
T  37201626 taccttaataagaatcactttttaaaaaataataatttagtttgtttggataca 37201679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 801 - 876
Target Start/End: Original strand, 30620480 - 30620555
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  30620480 gtttgttacagattaaaataaatgtgattttcacataaaataatttagagattatattttagagattttgtgaaaa 30620555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 801 - 876
Target Start/End: Original strand, 30623101 - 30623176
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  30623101 gtttgttacagattaaaataaatgtgattttcacataaaataatttagagattatattttagagattttgtgaaaa 30623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 809 - 871
Target Start/End: Original strand, 43004795 - 43004857
Alignment:
Q  809 cggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat 871  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43004795 cggattaaaataaaagtgattttgacataaaataatttagagattatattttagatattttat 43004857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 824 - 974
Target Start/End: Original strand, 3255999 - 3256151
Alignment:
Q  824 gtgattttgacataaaataatttagagattatattttagagattttatg--aaaatcag-atctattttacgtttgtttaccgtactaaaaatcacnnnn 920  Q
    |||||||| ||||| ||||||||| ||||||| ||||||||||||||||  |||||||| |||| ||||  |||||||||||||| ||||||||||        
T  3255999 gtgattttaacatagaataatttatagattattttttagagattttatgaaaaaatcagaatctcttttttgtttgtttaccgtaataaaaatcactttt 3256098  T
Q  921 nnnaaacaaataatttagtttgtttggatacaaacttataaaagaagatttttt 974  Q
       ||||||||||||||||||||||| ||||||   |||||||| |||||||||    
T  3256099 tttaaacaaataatttagtttgtttgtatacaactatataaaag-agatttttt 3256151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 801 - 985
Target Start/End: Original strand, 7495474 - 7495644
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcag-atctattttacgtttgttt 899  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     |||||||| |         |||||||| |||||||| |||||||||     
T  7495474 gtttgttacggattaaaataaaagtgattttgacataaaataatttag-----atattttata--------aaaaatcagaatctatttaacgtttgtta 7495560  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatt 985  Q
    |||||| ||||||||||       ||||||||||| ||||||||||||||||||   ||||||||  |||||||||||||||||||    
T  7495561 accgtaataaaaatcac-ttttttaaacaaataatctagtttgtttggatacaactatataaaag-ggattttttgttacaaaatt 7495644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 796 - 853
Target Start/End: Original strand, 21479091 - 21479148
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21479091 ggctcgtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 21479148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 802 - 867
Target Start/End: Complemental strand, 43968394 - 43968330
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt 867  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  43968394 tttgttacggattaaaataaaagt-attttgacataaaataatttagagattattttttagagatt 43968330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 801 - 876
Target Start/End: Original strand, 11667078 - 11667153
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| || ||| |||||||||||||    
T  11667078 gtttgttacgaattaaaataaaagtgattttgtcataaaataatttagatattattttgtagtgattttatgaaaa 11667153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 796 - 857
Target Start/End: Complemental strand, 41347511 - 41347450
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 857  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  41347511 ggctcgtttgttacggattaaaataaaagtcattttgacattaaataatttagagattatat 41347450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 801 - 986
Target Start/End: Complemental strand, 40662953 - 40662782
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaatcag-atctattttacgtttgttt 899  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||    ||         |||||||| |||||||||  ||||||||    
T  40662953 gtttgttacggattagaataaaagtgattttgacataaaatagtttagagattttat----ga---------aaaatcagaatctattttgtgtttgttt 40662867  T
Q  900 accgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    || ||| ||||||||||       ||| ||||||||||||||||||||||||||   ||||||||  ||||||||||||||||||||    
T  40662866 acagtaataaaaatcac-ttttttaaataaataatttagtttgtttggatacaactatataaaag-ggattttttgttacaaaatta 40662782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 801 - 853
Target Start/End: Original strand, 30668785 - 30668837
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  30668785 gttttttacggattaaaataaaagtgattttcacataaaataatttagagatt 30668837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 39844414 - 39844362
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  39844414 gtttgttacggattaaaatataagtggttttgacataaaataatttagagatt 39844362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 43968763 - 43968711
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  43968763 gtttgctacggattaaaataaaagtgattttcacataaaataatttagagatt 43968711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 802 - 853
Target Start/End: Original strand, 30666203 - 30666254
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  30666203 tttgttacagattaaaataaaagtgattttcacataaaataatttagagatt 30666254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 801 - 851
Target Start/End: Complemental strand, 645420 - 645370
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagaga 851  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  645420 gtttattatggattaaaataaaagtgattttgacataaaataatttagaga 645370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 801 - 846
Target Start/End: Complemental strand, 40663027 - 40662982
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataattt 846  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  40663027 gtttgttacggattagaataaaagtgattttgacataaaataattt 40662982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 876
Target Start/End: Complemental strand, 18297107 - 18297032
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgaca-taaaataatttagagattatattttagagattttatgaaaa 876  Q
    |||| |||| ||||||||||||| ||||||| ||| |||||||||||||||||||| || |||||||||||||||||    
T  18297107 gtttattacagattaaaataaaaatgatttt-acagtaaaataatttagagattatcttatagagattttatgaaaa 18297032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 869
Target Start/End: Original strand, 34453627 - 34453695
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 869  Q
    |||||||||| ||||||||||||||||||||   ||||||||||||||||| ||| || ||||||||||    
T  34453627 gtttgttacgtattaaaataaaagtgattttattataaaataatttagagactattttatagagatttt 34453695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 801 - 860
Target Start/End: Original strand, 9977794 - 9977853
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatatttt 860  Q
    ||||||| | |||||||||||||||||||||||| | |||||||||||||||||| ||||    
T  9977794 gtttgttgcagattaaaataaaagtgattttgacgttaaataatttagagattatttttt 9977853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 833 - 876
Target Start/End: Original strand, 30632162 - 30632205
Alignment:
Q  833 acataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  30632162 acataaaataatttagagattatattttagagattttgtgaaaa 30632205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 801 - 855
Target Start/End: Complemental strand, 27719863 - 27719809
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 855  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||| |||||||    
T  27719863 gtttgtcacggattaaaataaaagtgaatttgacattaaataatttaaagattat 27719809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 928 - 986
Target Start/End: Complemental strand, 43968297 - 43968240
Alignment:
Q  928 aaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    ||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  43968297 aaataatttagtttgtttggatacaacgatataaaag-agattttttgttacaaaatta 43968240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 811 - 853
Target Start/End: Complemental strand, 44833346 - 44833304
Alignment:
Q  811 gattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  44833346 gattaaaataaaagtgattttgacatgaaataatttagagatt 44833304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 796 - 853
Target Start/End: Complemental strand, 7075100 - 7075043
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||| |||| ||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  7075100 ggctcgtttattatggattaaaataaaaatgattttggcataaaataatttagagatt 7075043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 858 - 986
Target Start/End: Complemental strand, 7075052 - 7074923
Alignment:
Q  858 tttagagattttatgaaaa--tcagatctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 955  Q
    |||||||||||||||||||  |   || ||||||  |||||||||||||| ||||||||||       |||||| |||||||||||||| ||||||||      
T  7075052 tttagagattttatgaaaaattataatttattttgagtttgtttaccgtaataaaaatcactttttttaaacaattaatttagtttgttaggatacaact 7074953  T
Q  956 ttataaaagaagattttttgttacaaaatta 986  Q
     ||||||| | ||||||||| ||||||||||    
T  7074952 atataaaa-atgattttttgatacaaaatta 7074923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 936 - 989
Target Start/End: Original strand, 30632215 - 30632267
Alignment:
Q  936 tagtttgtttggatacaaacttataaaagaagattttttgttacaaaattaatt 989  Q
    ||||||||||||||||||   ||||||||| |||||||||||||||||||||||    
T  30632215 tagtttgtttggatacaactatataaaaga-gattttttgttacaaaattaatt 30632267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 801 - 846
Target Start/End: Complemental strand, 40663099 - 40663055
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataattt 846  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||    
T  40663099 gtttgttacggat-aaaataaaagtgattttgacattaaataattt 40663055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 829 - 876
Target Start/End: Original strand, 559415 - 559462
Alignment:
Q  829 tttgacataaaataatttagagattatattttagagattttatgaaaa 876  Q
    ||||||||  ||||||||||||||||| ||||||||| ||||||||||    
T  559415 tttgacattcaataatttagagattattttttagagactttatgaaaa 559462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 662
Target Start/End: Original strand, 28804329 - 28804404
Alignment:
Q  587 atagcagaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtcaaacagcggctata 662  Q
    ||||||||||||||| |||| | ||||||| ||  |||||||||||| |||||| | |||||||| | ||||||||    
T  28804329 atagcagaatttgaacaaatcgctattgtttcagaataagctatttagtacaaagtattgtcaaataacggctata 28804404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 801 - 831
Target Start/End: Complemental strand, 932797 - 932767
Alignment:
Q  801 gtttgttacggattaaaataaaagtgatttt 831  Q
    |||||||||||||||||||||||||||||||    
T  932797 gtttgttacggattaaaataaaagtgatttt 932767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 788 - 854
Target Start/End: Original strand, 35125253 - 35125319
Alignment:
Q  788 aaattaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatta 854  Q
    |||||||||| | ||||||||  ||||||||||||  |||||||||||| ||| |||||||| ||||    
T  35125253 aaattaaaggtttgtttgttatagattaaaataaatatgattttgacattaaacaatttagatatta 35125319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 89; Significance: 2e-42; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 796 - 986
Target Start/End: Original strand, 205116 - 205305
Alignment:
Q  796 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaatcag-atctattttacgt 893  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || ||||||||| |||    
T  205116 ggcttgtttgttacggattaaaatgatagtgattttgacataaaataa-ttagagattatattttagagattttatgaaaaattagaatctattttgcgt 205214  T
Q  894 ttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaagattttttgttacaaaatta 986  Q
    |||||||||||| |||||||||        ||||||||||| |||||||||| |||||||   |||||||||  |||||||||||||||||||    
T  205215 ttgtttaccgtaataaaaatcattttttttaaacaaataatctagtttgtttagatacaactatataaaaga--attttttgttacaaaatta 205305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 858 - 986
Target Start/End: Complemental strand, 106233 - 106104
Alignment:
Q  858 tttagagattttatgaaaa-tcaga-tctattttacgtttgtttaccgtactaaaaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 955  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||       ||||||||||| | ||||||||||||||||      
T  106233 tttagagattttatgaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcactttttttaaacaaataatcttgtttgtttggatacaact 106134  T
Q  956 ttataaaagaagattttttgttacaaaatta 986  Q
     ||||||| | ||||||||||||||||||||    
T  106133 atataaaa-aggattttttgttacaaaatta 106104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 106275 - 106224
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  106275 gtttgttacagattaaa-taaaagtgattttgacataaaataatttagagatt 106224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 801 - 902
Target Start/End: Complemental strand, 71586 - 71483
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt-ttatgaaaatcag-atctattttacgtttgtt 898  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||   |||||||| |||||||||| |||||||    
T  71586 gtttgttatggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttacaaaatcagaatctattttatgtttgtt 71487  T
Q  899 tacc 902  Q
    ||||    
T  71486 tacc 71483  T

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Target: scaffold0224 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 801 - 853
Target Start/End: Complemental strand, 21898 - 21846
Alignment:
Q  801 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 853  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21898 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 21846  T

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Target: scaffold0376 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 852 - 914
Target Start/End: Complemental strand, 2110 - 2046
Alignment:
Q  852 ttatattttagagattttatgaaaa-tcaga-tctattttacgtttgtttaccgtactaaaaatc 914  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||||    
T  2110 ttatattttagagattttatgaaaaatcagaatctattttacgtttgtttaccttaataaaaatc 2046  T

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Target: scaffold0283 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 802 - 855
Target Start/End: Complemental strand, 10427 - 10375
Alignment:
Q  802 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 855  Q
    |||||||  ||||||||||||||||| ||||| || ||||||||||||||||||    
T  10427 tttgttatagattaaaataaaagtgaatttgatat-aaataatttagagattat 10375  T

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