View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4698_high_14 (Length: 236)

Name: NF4698_high_14
Description: NF4698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4698_high_14
NF4698_high_14
[»] chr5 (18 HSPs)
chr5 (30-212)||(38158217-38158399)
chr5 (11-196)||(21059100-21059284)
chr5 (11-195)||(18843716-18843900)
chr5 (15-196)||(19578942-19579123)
chr5 (11-196)||(18051477-18051659)
chr5 (18-196)||(43234868-43235046)
chr5 (14-195)||(23172375-23172560)
chr5 (37-196)||(22645688-22645848)
chr5 (14-147)||(19979648-19979781)
chr5 (11-188)||(27340134-27340307)
chr5 (71-197)||(20923717-20923843)
chr5 (11-178)||(41688609-41688775)
chr5 (14-147)||(20320992-20321124)
chr5 (122-203)||(19042444-19042525)
chr5 (145-196)||(24647939-24647990)
chr5 (132-194)||(20320926-20320988)
chr5 (55-97)||(19042406-19042448)
chr5 (207-236)||(38162586-38162615)
[»] chr3 (35 HSPs)
chr3 (37-196)||(29067284-29067443)
chr3 (11-193)||(39427905-39428087)
chr3 (14-196)||(28745770-28745958)
chr3 (11-196)||(24620144-24620332)
chr3 (11-196)||(8156074-8156260)
chr3 (43-196)||(20756039-20756192)
chr3 (40-195)||(3449265-3449419)
chr3 (37-191)||(17064326-17064480)
chr3 (11-178)||(22494732-22494892)
chr3 (15-123)||(42696920-42697028)
chr3 (37-187)||(21963438-21963587)
chr3 (37-187)||(21985874-21986023)
chr3 (63-196)||(24649684-24649818)
chr3 (11-196)||(22137278-22137461)
chr3 (70-196)||(30727694-30727820)
chr3 (44-196)||(22356029-22356182)
chr3 (96-196)||(17796377-17796477)
chr3 (96-196)||(19104817-19104917)
chr3 (96-192)||(17796272-17796368)
chr3 (96-196)||(17796486-17796586)
chr3 (96-192)||(19104712-19104808)
chr3 (96-196)||(19104926-19105026)
chr3 (50-196)||(25870350-25870505)
chr3 (11-76)||(15515200-15515265)
chr3 (92-196)||(15806531-15806634)
chr3 (92-196)||(27676356-27676460)
chr3 (120-195)||(28135723-28135798)
chr3 (58-98)||(27676637-27676677)
chr3 (92-174)||(10872971-10873053)
chr3 (58-98)||(6136457-6136497)
chr3 (58-98)||(13286145-13286185)
chr3 (19-68)||(9152935-9152984)
chr3 (120-192)||(25614038-25614110)
chr3 (58-98)||(25870210-25870250)
chr3 (148-192)||(42696870-42696914)
[»] chr6 (27 HSPs)
chr6 (11-196)||(30912356-30912541)
chr6 (11-197)||(15528054-15528240)
chr6 (14-196)||(17250057-17250238)
chr6 (11-196)||(26053240-26053425)
chr6 (11-196)||(26073293-26073478)
chr6 (11-181)||(23897826-23897996)
chr6 (11-196)||(17543684-17543869)
chr6 (16-196)||(7223519-7223692)
chr6 (11-196)||(19748333-19748518)
chr6 (14-196)||(17103202-17103377)
chr6 (58-196)||(27233268-27233406)
chr6 (11-196)||(21354748-21354925)
chr6 (24-196)||(7918338-7918510)
chr6 (71-196)||(6943464-6943589)
chr6 (37-188)||(22498855-22499006)
chr6 (14-196)||(11327518-11327700)
chr6 (36-193)||(2912217-2912373)
chr6 (43-192)||(10508999-10509148)
chr6 (93-196)||(18491063-18491166)
chr6 (120-194)||(3573985-3574059)
chr6 (121-189)||(8545019-8545087)
chr6 (122-196)||(5422803-5422877)
chr6 (94-176)||(4841946-4842026)
chr6 (11-62)||(7918292-7918343)
chr6 (19-74)||(27614594-27614651)
chr6 (132-197)||(7359848-7359912)
chr6 (58-98)||(23898012-23898052)
[»] scaffold0186 (1 HSPs)
scaffold0186 (11-196)||(8443-8628)
[»] chr8 (29 HSPs)
chr8 (11-196)||(5922049-5922234)
chr8 (11-196)||(11879600-11879785)
chr8 (11-196)||(11897016-11897201)
chr8 (11-192)||(31424167-31424348)
chr8 (11-194)||(15294672-15294855)
chr8 (11-194)||(15475041-15475224)
chr8 (11-181)||(22910146-22910316)
chr8 (12-194)||(19704400-19704583)
chr8 (11-192)||(3094187-3094378)
chr8 (11-195)||(29384261-29384444)
chr8 (45-196)||(17646993-17647144)
chr8 (14-197)||(45403028-45403211)
chr8 (11-196)||(27836408-27836593)
chr8 (11-147)||(23142224-23142360)
chr8 (11-157)||(6810861-6811006)
chr8 (17-177)||(32424354-32424511)
chr8 (11-192)||(7489227-7489409)
chr8 (14-107)||(9212202-9212295)
chr8 (93-196)||(24056594-24056697)
chr8 (14-192)||(6292289-6292467)
chr8 (133-196)||(477113-477176)
chr8 (94-196)||(15761466-15761568)
chr8 (149-196)||(9212300-9212347)
chr8 (58-98)||(29384200-29384240)
chr8 (149-192)||(23136353-23136396)
chr8 (58-98)||(8582244-8582284)
chr8 (58-98)||(17647198-17647238)
chr8 (58-98)||(27836352-27836392)
chr8 (208-236)||(44807096-44807124)
[»] chr7 (42 HSPs)
chr7 (11-196)||(24725421-24725606)
chr7 (11-199)||(4247353-4247541)
chr7 (11-196)||(44944789-44944978)
chr7 (11-197)||(24990015-24990201)
chr7 (13-196)||(26281256-26281438)
chr7 (14-196)||(14055251-14055433)
chr7 (14-196)||(14365279-14365461)
chr7 (11-195)||(5058530-5058714)
chr7 (16-196)||(5715290-5715469)
chr7 (11-194)||(8346476-8346660)
chr7 (12-196)||(27221418-27221602)
chr7 (43-196)||(7730319-7730471)
chr7 (18-196)||(8329995-8330174)
chr7 (43-196)||(9685220-9685373)
chr7 (52-196)||(22687649-22687793)
chr7 (11-196)||(8343743-8343929)
chr7 (58-196)||(39182260-39182397)
chr7 (14-158)||(17811385-17811529)
chr7 (11-118)||(20570829-20570936)
chr7 (37-187)||(11324988-11325137)
chr7 (58-196)||(11326386-11326524)
chr7 (72-189)||(8571250-8571367)
chr7 (38-176)||(27509914-27510052)
chr7 (11-196)||(26617420-26617605)
chr7 (78-196)||(21846437-21846554)
chr7 (14-98)||(6916878-6916961)
chr7 (58-156)||(1977692-1977790)
chr7 (110-196)||(8630001-8630087)
chr7 (93-197)||(30294174-30294275)
chr7 (120-196)||(21157827-21157903)
chr7 (58-98)||(8329867-8329907)
chr7 (58-98)||(8329932-8329972)
chr7 (58-98)||(21846335-21846375)
chr7 (14-54)||(21846393-21846433)
chr7 (102-196)||(26565663-26565757)
chr7 (58-98)||(4247557-4247597)
chr7 (123-179)||(4574488-4574544)
chr7 (58-98)||(8343690-8343730)
chr7 (58-98)||(8346354-8346394)
chr7 (58-98)||(8346419-8346459)
chr7 (58-98)||(14055458-14055498)
chr7 (58-98)||(14365486-14365526)
[»] chr4 (25 HSPs)
chr4 (11-196)||(5361907-5362092)
chr4 (11-196)||(13023567-13023755)
chr4 (11-196)||(9770112-9770297)
chr4 (11-196)||(8889228-8889413)
chr4 (11-196)||(10142899-10143084)
chr4 (14-195)||(17466080-17466261)
chr4 (11-196)||(36120824-36121009)
chr4 (11-194)||(5375666-5375849)
chr4 (11-196)||(9911355-9911541)
chr4 (43-196)||(13551598-13551751)
chr4 (11-196)||(37240262-37240442)
chr4 (11-196)||(23064905-23065092)
chr4 (63-197)||(8011212-8011346)
chr4 (92-195)||(7044728-7044831)
chr4 (92-196)||(18459733-18459837)
chr4 (91-192)||(6347088-6347189)
chr4 (93-196)||(4156763-4156866)
chr4 (103-196)||(24719517-24719610)
chr4 (92-192)||(7815561-7815661)
chr4 (145-196)||(9149813-9149864)
chr4 (92-196)||(7452420-7452523)
chr4 (61-98)||(4157053-4157090)
chr4 (58-98)||(5375866-5375906)
chr4 (58-98)||(7044964-7045004)
chr4 (152-196)||(8744087-8744131)
[»] chr1 (31 HSPs)
chr1 (11-196)||(9954979-9955164)
chr1 (11-196)||(13276210-13276395)
chr1 (11-196)||(9352007-9352192)
chr1 (11-192)||(13100195-13100376)
chr1 (11-196)||(9327157-9327344)
chr1 (11-195)||(42180009-42180193)
chr1 (19-194)||(12513283-12513458)
chr1 (14-197)||(23528655-23528838)
chr1 (11-196)||(18304755-18304940)
chr1 (11-196)||(25146713-25146897)
chr1 (11-189)||(16125399-16125580)
chr1 (11-196)||(9128784-9128969)
chr1 (19-194)||(19009898-19010073)
chr1 (11-196)||(21846218-21846397)
chr1 (58-196)||(41032661-41032799)
chr1 (11-195)||(17869694-17869873)
chr1 (101-197)||(14074404-14074500)
chr1 (11-107)||(32881416-32881512)
chr1 (16-118)||(18228279-18228380)
chr1 (11-97)||(47785958-47786044)
chr1 (121-196)||(30619075-30619150)
chr1 (63-196)||(17055995-17056128)
chr1 (92-196)||(18337547-18337650)
chr1 (109-196)||(12800623-12800710)
chr1 (92-193)||(27917477-27917578)
chr1 (92-196)||(24117007-24117111)
chr1 (132-196)||(34478835-34478899)
chr1 (92-181)||(8772719-8772809)
chr1 (64-98)||(22789449-22789483)
chr1 (58-98)||(13100391-13100431)
chr1 (58-98)||(32881521-32881561)
[»] chr2 (25 HSPs)
chr2 (16-196)||(31237926-31238106)
chr2 (11-196)||(36429848-36430033)
chr2 (22-196)||(30432419-30432593)
chr2 (13-196)||(1404783-1404966)
chr2 (11-195)||(35565898-35566082)
chr2 (11-194)||(31578007-31578189)
chr2 (11-196)||(15588796-15588978)
chr2 (67-196)||(23863321-23863450)
chr2 (14-196)||(20063714-20063896)
chr2 (14-113)||(1690675-1690774)
chr2 (89-196)||(1690784-1690891)
chr2 (70-197)||(19491854-19491982)
chr2 (63-194)||(25539222-25539353)
chr2 (94-164)||(31023255-31023325)
chr2 (93-196)||(5395674-5395777)
chr2 (102-196)||(16766710-16766804)
chr2 (152-196)||(29660893-29660937)
chr2 (94-196)||(17995055-17995157)
chr2 (58-98)||(13502561-13502601)
chr2 (104-168)||(34841584-34841648)
chr2 (58-98)||(35565845-35565885)
chr2 (58-97)||(16766987-16767026)
chr2 (120-180)||(13503095-13503156)
chr2 (207-236)||(31025868-31025897)
chr2 (152-192)||(15627659-15627699)
[»] scaffold0042 (2 HSPs)
scaffold0042 (11-196)||(93649-93833)
scaffold0042 (58-98)||(93593-93633)
[»] scaffold0417 (1 HSPs)
scaffold0417 (11-196)||(7399-7584)
[»] scaffold0510 (1 HSPs)
scaffold0510 (58-181)||(91-215)
[»] scaffold0048 (1 HSPs)
scaffold0048 (104-196)||(48825-48917)
[»] scaffold0036 (1 HSPs)
scaffold0036 (92-196)||(37191-37295)
[»] scaffold0016 (1 HSPs)
scaffold0016 (21-75)||(58736-58790)
[»] scaffold0603 (1 HSPs)
scaffold0603 (120-196)||(9073-9149)


Alignment Details
Target: chr5 (Bit Score: 163; Significance: 3e-87; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 38158217 - 38158399
Alignment:
Q  30 atgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgag 129  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38158217 atgttatatagtcataaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattttgtctattttgggattctactctggatttgag 38158316  T
Q  130 ttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaattgtctcaaccaaattt 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38158317 ttgttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaattgtctcaaccaaattt 38158399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 21059100 - 21059284
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||| |||||| |||    
T  21059100 tactaaatatatgttataaatggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttaggg 21059199  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  21059200 attctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 21059284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 18843900 - 18843716
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| |||  ||||||||||| ||| |||||||||||||||||    
T  18843900 tactaaatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattttgtctattttggg 18843801  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||  ||||||||||| |||||| ||||||||||||||||||||||  ||| ||||||||||||||||||||| |||||||    
T  18843800 attctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 19579123 - 19578942
Alignment:
Q  15 aaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattc 114  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||  |||||||||||||    
T  19579123 aaatatatgttatgaatggtaaatagtcataaatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttgggattc 19579024  T
Q  115 tactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||| ||||||| ||| |||||| ||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  19579023 tactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctggattttatgatttaagttggaattttgacaacaat 19578942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 18051477 - 18051659
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||  || || |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||| |     
T  18051477 tactaaatatatgttataaat--tatat-gtcataaatgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttaga 18051573  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| | ||||||||| ||||||  |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  18051574 attctactatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaat 18051659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 43235046 - 43234868
Alignment:
Q  18 tatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctac 117  Q
    ||||||||||||||| |  |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||| |||||||||    
T  43235046 tatatgttataaatggtttatagacataaatgacttagttgataagaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctac 43234947  T
Q  118 tctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    | ||||||| ||| |||||| ||||||||||||||||||||||  |||||||||||||||| || ||||||||||||||    
T  43234946 tatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 23172375 - 23172560
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggat----tttgtctattttgg 109  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||| | ||||||||| || |||    ||||||||||||||    
T  23172375 taaatatatgttacaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtctattttgg 23172474  T
Q  110 gattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    ||||||||| ||||||| ||| ||||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  23172475 gattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 22645688 - 22645848
Alignment:
Q  37 atagtcataaatgac-ttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttg 135  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||||||  ||||| |||   |||||||||||| |||| ||||||| | | ||||    
T  22645688 atagtcataaatgacattagtttataagaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttg 22645787  T
Q  136 aaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    || ||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||    
T  22645788 aaggtgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaat 22645848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 19979781 - 19979648
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  | ||||||||||    
T  19979781 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgttttgggatt 19979682  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaa 147  Q
    ||||  || |||||||| ||||||  ||||||||    
T  19979681 ctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 27340134 - 27340307
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||| ||||| || |||||    ||||||||||||||||||||||  ||||||| ||||||||||| ||| |||||| |||||||  |    
T  27340134 tactaaatatatgttacaaatggtatatagt----aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcctattttaag 27340229  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttg 188  Q
    |||||||| | ||||||||| ||||||  ||||||||||||||||||| || |||||| |||||||||||| ||||||    
T  27340230 attctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 20923843 - 20923717
Alignment:
Q  71 aaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttagg 170  Q
    |||||| ||||||||||| ||||| |||| ||||||| |||||||||| |||||||  || |||||| ||||||||||||||||||| || |||||||||    
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  171 atttaagtcggaattttgacaacaatt 197  Q
    ||||||||||| |||||||||||||||    
T  20923743 atttaagtcgggattttgacaacaatt 20923717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 178
Target Start/End: Original strand, 41688609 - 41688775
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||||||||| |||| || ||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||  |||||| |     
T  41688609 tactaaatatatgttatgaatggtatatagttataaatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttaga 41688708  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagt 178  Q
    ||| |||| |  |||| ||| |||||| ||||||||| | ||||||||| | ||||||||||||||||    
T  41688709 attttactataaatttaagtcgttgaaggtgaagaaaattgcaaaatccga-attttaggatttaagt 41688775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 20321124 - 20320992
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||||||| |||||||| |  ||| ||||| |||||||||| |||    
T  20321124 taaatatatgttataaatgatatatggtcataaatgacttagtttataag-aatcgtaaaatcgcaatcaaagttgatgaattttatctattttggaatt 20321026  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaa 147  Q
     |||| ||||||| |||  ||||| |||||||||    
T  20321025 ttactatggattttagtcattgaaggtgaagaaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 19042444 - 19042525
Alignment:
Q  122 gatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaattgtctca 203  Q
    ||||||||| |||||| |||||||||||| ||||||| || ||||||| |||||||| || |||||||||||| | ||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaacagtagtctca 19042525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 24647990 - 24647939
Alignment:
Q  145 aaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||||| ||| || |||||| |||||||||||||||||||||||||||    
T  24647990 aaagtcgcaatatcttaaattttaagatttaagtcggaattttgacaacaat 24647939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 20320988 - 20320926
Alignment:
Q  132 gttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 194  Q
    |||||| ||||||||||| |||||||| || ||||||||||||| || || ||||||||||||    
T  20320988 gttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaaca 20320926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 19042406 - 19042448
Alignment:
Q  55 gtttataagaaatcgtaaaatcacaatcaaaatcaatggattt 97  Q
    |||||||||||||||||||||| ||||||||||| || |||||    
T  19042406 gtttataagaaatcgtaaaatcgcaatcaaaatcgatagattt 19042448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 38162586 - 38162615
Alignment:
Q  207 aaatttaggcttaattgcacttttggcccc 236  Q
    ||||||||||||||||||||||||||||||    
T  38162586 aaatttaggcttaattgcacttttggcccc 38162615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 37 - 196
Target Start/End: Complemental strand, 29067443 - 29067284
Alignment:
Q  37 atagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttga 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  29067443 atagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcgttga 29067344  T
Q  137 aagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    | ||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||    
T  29067343 aggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 29067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 39428087 - 39427905
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||||||||||| |  || |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  39428087 tactaaatatatgttataagtagtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttggg 39427988  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaac 193  Q
    |||||||| | ||||||||| |||||| ||||||||||| |||||||||  |||||||  |||||| |||| |||||||||||    
T  39427987 attctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccaggattttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 28745958 - 28745770
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataa------gaaatcgtaaaatcacaatcaaaatcaatggattttgtctatttt 107  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||      |||||||||||||| ||||||||||| ||| ||||||||||||||    
T  28745958 taaatatatgttataaatagtatatagtcataaatgacttagtttataattataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctatttt 28745859  T
Q  108 gggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    | ||||||||| || |||||||| |||||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  28745858 gagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaat 28745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 24620144 - 24620332
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||| ||||||||| || ||| |||||||||||||||||||||||||||||||||||  |||| |||||| ||| |||||| |||||||| |    
T  24620144 tactaaatatattttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgag 24620243  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaa---gtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| || |||||||| |||||| |||||||||   ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  24620244 attctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaat 24620332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 8156074 - 8156260
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtct-attttgg 109  Q
    |||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  8156074 tactaaatatatgttataaatggtatatagttataaataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattttgg 8156173  T
Q  110 gattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||| |||| |||||||||||  ||||| ||||| ||| ||| ||||| ||  ||||||| |||||||| || ||||||||||||||    
T  8156174 gattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaacaat 8156260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 43 - 196
Target Start/End: Complemental strand, 20756192 - 20756039
Alignment:
Q  43 ataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtga 142  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| || ||||||| |||||||  ||||||||| |||||||||||  ||||| ||||    
T  20756192 ataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtga 20756093  T
Q  143 agaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| ||||||||||||  ||||||  ||||||||||| ||||||||||||||    
T  20756092 agaaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 40 - 195
Target Start/End: Original strand, 3449265 - 3449419
Alignment:
Q  40 gtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaag 139  Q
    |||| |||||||||| ||||||||||||||||||||| |||| |||||| |||||||||| ||||||| |||||||||| | ||||| ||  |||||| |    
T  3449265 gtcacaaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaagg 3449363  T
Q  140 tgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    | |||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  3449364 taaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 191
Target Start/End: Complemental strand, 17064480 - 17064326
Alignment:
Q  37 atagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttga 136  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| |||||||||||||| | |||||||| || ||| |||| |||||    
T  17064480 atagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgttga 17064381  T
Q  137 aagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    | ||||| | | ||||||||||||  |||||| |||||||||||| |||||||||    
T  17064380 aggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 178
Target Start/End: Original strand, 22494732 - 22494892
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||||       ||||||||| ||||||||||| ||| ||||||| |||||| ||    
T  22494732 tactaaatatatgttataaatggtatatagtcataactgacttagtttat-------cgtaaaatcgcaatcaaaatcgatgaattttgtttattttagg 22494824  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagt 178  Q
    |||||||| || |||| ||| |||||| ||||| ||||||||||||||  ||||||||||||||||||    
T  22494825 attctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagattttaggatttaagt 22494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 42697028 - 42696920
Alignment:
Q  15 aaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattc 114  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||| |||||||| |||||    
T  42697028 aaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgagattc 42696929  T
Q  115 tactctgga 123  Q
    |||| ||||    
T  42696928 tactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 21963587 - 21963438
Alignment:
Q  37 atagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttga 136  Q
    ||||||||||||||||||||  ||||||||||| |||||| | ||||||||| ||||||||||  |||||| ||||| |||| ||||||||||| ||| |    
T  21963587 atagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttca 21963489  T
Q  137 aagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaatttt 187  Q
    | ||||||||||||| |||||| |  ||||||||||||||||||| |||||    
T  21963488 aggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 21986023 - 21985874
Alignment:
Q  37 atagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttga 136  Q
    ||||||||||||||||||||  ||||||||||| |||||| | ||||||||| ||||||||||  |||||| ||||| |||| ||||||||||| ||| |    
T  21986023 atagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttca 21985925  T
Q  137 aagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaatttt 187  Q
    | ||||||||||||| |||||| |  ||||||||||||||||||| |||||    
T  21985924 aggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 196
Target Start/End: Original strand, 24649684 - 24649818
Alignment:
Q  63 gaaatcgtaaaatcacaatcaaaatcaatggattttg-tctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatccta 161  Q
    ||||||||||||||||| |||||||  ||| |||||| | |||||||| |||||||| ||||||||||| |||||| |||||| |||||  |||||||||    
T  24649684 gaaatcgtaaaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatccta 24649783  T
Q  162 gattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||| |||||||||||| ||||||||||||||    
T  24649784 gattttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 22137461 - 22137278
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||| |||||||||  || ||||||||||||||||||||  ||||||||||| |||||| |||| |||||| ||||||||||  |||||||||    
T  22137461 tactaaatata-gttataaatagtatatagtcataaatgacttagtaaataagaaatcg-aaaatcgcaattaaaatcgatggattttgcatattttggg 22137364  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||| |||| ||||||||||  ||| || ||||||||||||| || ||| |  ||||||||||||||||| | ||||| | ||||||    
T  22137363 attttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttaggatttaagtcaggattttaaaaacaat 22137278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 196
Target Start/End: Original strand, 30727694 - 30727820
Alignment:
Q  70 taaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttag 169  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||||| | ||||||||| |||||| ||||||||||||| ||||| |  |||||||     
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  170 gatttaagtcggaattttgacaacaat 196  Q
    |||||||||| | ||||||| ||||||    
T  30727794 gatttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 22356029 - 22356182
Alignment:
Q  44 taaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtg-a 142  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||  |||||| |||||||||| || |||  | ||||||||  || |    
T  22356029 taaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaa 22356128  T
Q  143 agaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    | ||| ||  ||||||||  ||||||||||||||||||||||||||| ||||||    
T  22356129 aaaaaatcttaaaatcctgaattttaggatttaagtcggaattttgataacaat 22356182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 17796477 - 17796377
Alignment:
Q  96 tttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||||||| ||||||| || || |||||||||||||||  |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  17796477 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 17796378  T
Q  196 t 196  Q
    |    
T  17796377 t 17796377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 19104917 - 19104817
Alignment:
Q  96 tttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||||||| ||||||| || || |||||||||||||||  |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  19104917 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 19104818  T
Q  196 t 196  Q
    |    
T  19104817 t 19104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 17796368 - 17796272
Alignment:
Q  96 tttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    |||||||||||| ||||||| || || |||| |||||||||| ||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  17796368 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 17796272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 17796586 - 17796486
Alignment:
Q  96 tttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||||||| ||||||| || || |||| |||||||||| ||||| ||||||| |||||||||||||||| ||||||| ||| ||||||||||||||    
T  17796586 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 17796487  T
Q  196 t 196  Q
    |    
T  17796486 t 17796486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 19104808 - 19104712
Alignment:
Q  96 tttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    |||||||||||| ||||||| || || |||| |||||||||| ||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  19104808 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 19104712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 19105026 - 19104926
Alignment:
Q  96 tttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||||||| ||||||| || || |||| |||||||||| ||||| ||||||| |||||||||||||||| ||||||| ||| ||||||||||||||    
T  19105026 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 19104927  T
Q  196 t 196  Q
    |    
T  19104926 t 19104926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 25870350 - 25870505
Alignment:
Q  50 acttagtttataagaaatcgtaaaatcacaatcaaaatcaa-----tggattttgtctattttgggattctactctggatttgagttgtt----gaaagt 140  Q
    ||||| ||||||||||||||||||||| |||||||||||||     ||||||||| |||||||| | |||||||  | |||||||| |||    |||  |    
T  25870350 acttaatttataagaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagat 25870449  T
Q  141 gaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||||| ||||||| | |||||||||||||||||||  ||||||||||||||    
T  25870450 gaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaacaat 25870505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 15515200 - 15515265
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatc 76  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  15515200 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtgaaatc 15515265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 15806531 - 15806634
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    |||||||| || |||||||||||| || |||||||||||  ||||| ||||| ||||||||||||| || |||| ||||||||||||||| |||||||||    
T  15806531 ggattttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtcgg-attttgaca 15806629  T
Q  192 acaat 196  Q
    |||||    
T  15806630 acaat 15806634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 27676460 - 27676356
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    |||||||  ||||||||||||||| || |||||||||||  | ||| ||||| ||||||||||||||||  |||||| |||||||||| | |||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  192 acaat 196  Q
    |||||    
T  27676360 acaat 27676356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 28135798 - 28135723
Alignment:
Q  120 tggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||||||   |||||||||| ||||||||||||||||  |||||| ||||||| ||||||||||||||||||    
T  28135798 tggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 27676677 - 27676637
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27676677 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 27676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 10872971 - 10873053
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggattt 174  Q
    |||||||| |||||||| |||||| || ||||||||||| |||||| ||||| ||  || ||||||||| |||||||||||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggattt 10873053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 6136457 - 6136497
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  6136457 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 13286185 - 13286145
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  13286185 tataagaaatcgtaaaatcacaatgaaaatcgatggatttt 13286145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 9152935 - 9152984
Alignment:
Q  19 atatgttataaatgttacatagtcataaatgacttagtttataagaaatc 68  Q
    ||||| |||| ||| || |||||||||||| |||||||||||||||||||    
T  9152935 atatgctatacatgatatatagtcataaataacttagtttataagaaatc 9152984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 25614038 - 25614110
Alignment:
Q  120 tggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    ||||||||| | || ||||||||  |||||||||||||| |||||||||  ||||||||| | ||||| ||||    
T  25614038 tggatttgaatcgtcgaaagtgagcaaagtcgcaaaatcatagattttaaaatttaagtcaggatttttacaa 25614110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 25870210 - 25870250
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||| |||||||| ||||||||||| |||||||||    
T  25870210 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 25870250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 42696914 - 42696870
Alignment:
Q  148 gtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    |||||||||||||  |||||| |||||||||||| ||||||||||    
T  42696914 gtcgcaaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 30912356 - 30912541
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||| ||||||| || ||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| |    
T  30912356 tactaaatatatgtgataaatgatatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtg 30912455  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||| | ||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||    
T  30912456 attctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaat 30912541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 15528054 - 15528240
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||  |    
T  15528054 tactaaatatatgttataaatggtatatagttataaatgacttagtttataagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaag 15528153  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaatt 197  Q
    |||||||| || |||| ||| ||| || ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  15528154 attctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatt 15528240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 17250238 - 17250057
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  17250238 taaatatatattataaat-ttatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggatt 17250140  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||| | ||||||| ||| |||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||    
T  17250139 ctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctggattttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 26053240 - 26053425
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||| ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||  |||||||||    
T  26053240 tactaactatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttggg 26053339  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||| | || ||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  26053340 attctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 26073293 - 26073478
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||| ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||  |||||||||    
T  26073293 tactaactatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttggg 26073392  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||| | || ||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  26073393 attctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 23897996 - 23897826
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||||| |     
T  23897996 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttaga 23897897  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcgg 181  Q
    ||| |||| ||||||||||| |||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  23897896 attttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagtcgg 23897826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 17543684 - 17543869
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||| |||||||||||||||||||||||| |||||||| ||||||||||| || |||||||  ||||||  |    
T  17543684 tactaaatatatgttataaatggtatatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagattttgcttattttaag 17543783  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  ||||||||||||||    
T  17543784 attctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaat 17543869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 7223692 - 7223519
Alignment:
Q  16 aatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattct 115  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||| |||||    
T  7223692 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattct 7223593  T
Q  116 actctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||| ||||||| ||       | ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  7223592 actatggatttaag-------aggtgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaat 7223519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 19748518 - 19748333
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||| ||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||  |    
T  19748518 tactaaatatattttataaatgatatatagtcttaaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaag 19748419  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||  ||||||||||  || || ||||||||| || ||||||||| |||| || |||||||||||| ||||||| ||||||    
T  19748418 attctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctggattgtaagatttaagtcgggattttgaaaacaat 19748333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 17103377 - 17103202
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||||| ||||||| || |||||| ||||| |||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  17103377 taaatatatgtcataaatgatatatagtcgtaaataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggatt 17103278  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| || |||||||| |||||||||       |||||||||||||  |||||| |||||||||||| ||||||||||||||    
T  17103277 ctactatgcatttgagtcgttgaaagt-------gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaat 17103202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 27233268 - 27233406
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaat 157  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||||||    
T  27233268 tataagaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaat 27233367  T
Q  158 cctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||| |||||||||||||||||||| | ||||||||||||    
T  27233368 cctggattttaggatttaagtcggtagtttgacaacaat 27233406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 21354925 - 21354748
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||    
T  21354925 tactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaataaaaaacgatggattttgtctattttggg 21354826  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||  ||||||| ||| |||||| || |||||||        |||  ||||||||||||||||| || ||||||||||||||    
T  21354825 attctaccatggatttaagtcgttgaaggtaaagaaag--------tccaggattttaggatttaagttgggattttgacaacaat 21354748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 7918338 - 7918510
Alignment:
Q  24 ttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctgga 123  Q
    ||||||||| || |||||||||||||||||| ||||||| |||||| |||||| ||||||||||| || |||||||  ||| || ||||| |||| ||||    
T  7918338 ttataaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatgga 7918437  T
Q  124 tttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||| ||| |||||| ||||| ||||||||||||||||  ||||||| ||||||||||| ||||||||||||||    
T  7918438 tttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 6943464 - 6943589
Alignment:
Q  71 aaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttagg 170  Q
    |||||| ||||||||||| ||| ||||||||||||||| ||||||||| | ||||||||| |||||| ||||||||||||||||||||||  ||||||||    
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  171 atttaagtcggaattttgacaacaat 196  Q
    ||||||||||| ||||||||||||||    
T  6943564 atttaagtcgggattttgacaacaat 6943589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 22498855 - 22499006
Alignment:
Q  37 atagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttga 136  Q
    ||||||||||||||||| |||||||||||||||||||||  |||| |||||| ||||||||||||||||||| |||| |||| ||||||||||| ||| |    
T  22498855 atagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgagtcgttca 22498954  T
Q  137 aagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttg 188  Q
    | |||||||||||||||||||  | || |||||||||| ||| || ||||||    
T  22498955 aggtgaagaaagtcgcaaaattgtggaatttaggattttagttgggattttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 11327518 - 11327700
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    |||||| |||| ||||||| || | |||||||||||| |||||| |||||||| ||||||||| |||| |||||| ||| |||||| |||||||||||||    
T  11327518 taaatacatgtgataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggatt 11327617  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| ||||||| |||  |||||  ||||||||  ||||||| | | ||||||||| |||||||||| ||||||||||||||    
T  11327618 ctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaat 11327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 2912217 - 2912373
Alignment:
Q  36 catagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttg 135  Q
    |||||||||||||||||| |||||||| ||||||||||||  ||||||||||| ||| ||||||  ||||||  ||||||||| | ||||||| | ||||    
T  2912217 catagtcataaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttg 2912315  T
Q  136 aaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaac 193  Q
    ||  || ||||||| ||||||||||| |||||| |||||||||||| |||||||||||    
T  2912316 aagatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 10508999 - 10509148
Alignment:
Q  43 ataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtga 142  Q
    |||||||||||||||||||| || ||||||||||  |||||||||| ||| |||||| |||||||||||||||||| |  ||||||||  ||||| ||||    
T  10508999 ataaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtcattgaatgtga 10509098  T
Q  143 agaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    |||||||| |||| | ||  ||||||||||||||||| | ||||||||||    
T  10509099 agaaagtcacaaatttctgaattttaggatttaagtctggattttgacaa 10509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 18491063 - 18491166
Alignment:
Q  93 gattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    |||||||||  |||||||||||| || ||||||||||| |||||| ||||| ||||  ||||||| || |||||||||||||||||||| |||||||||     
T  18491063 gattttgtcagttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacag 18491162  T
Q  193 caat 196  Q
    ||||    
T  18491163 caat 18491166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 3573985 - 3574059
Alignment:
Q  120 tggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 194  Q
    ||||||||||| |||||| |||||||||||||| |||| || |||||||| ||||||||||||||||||| ||||    
T  3573985 tggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 8545019 - 8545087
Alignment:
Q  121 ggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttga 189  Q
    |||||| | |||||||||||||  ||||||||||||||||| |||||||||||||| |||| |||||||    
T  8545019 ggatttaaattgttgaaagtgagtaaagtcgcaaaatcctaaattttaggatttaaatcgggattttga 8545087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 5422803 - 5422877
Alignment:
Q  122 gatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||| |||||| ||||| ||||| |||||||| |  ||||||| ||||||||||| ||||||||||||||    
T  5422803 gatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaat 5422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 4841946 - 4842026
Alignment:
Q  94 attttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaa 176  Q
    |||||| ||||| ||||||||| ||  |||||||||| |||||| ||||| |||||||||||||||   ||||||||||||||    
T  4841946 attttgcctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaatcc--aattttaggatttaa 4842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 7918292 - 7918343
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataa 62  Q
    |||||||| ||||||||||||| || |||||||||||||||||| |||||||    
T  7918292 tactaaatttatgttataaatgatatatagtcataaatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 27614594 - 27614651
Alignment:
Q  19 atatgttataaatgttacatagtcataaatgact--tagtttataagaaatcgtaaaa 74  Q
    |||||||||||||| || |||||||||||||| |  ||||||||||||||||||||||    
T  27614594 atatgttataaatggtatatagtcataaatgaattatagtttataagaaatcgtaaaa 27614651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 7359912 - 7359848
Alignment:
Q  132 gttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaatt 197  Q
    |||||| ||||| |||||||| ||||| || ||||||||| |||| ||| ||||||||||||||||    
T  7359912 gttgaaggtgaataaagtcgctaaatcttaaattttagga-ttaaatcgaaattttgacaacaatt 7359848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 23898052 - 23898012
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||| |||||||| ||||||||||| |||||||||    
T  23898052 tataagaaattgtaaaatctcaatcaaaatcgatggatttt 23898012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 8628 - 8443
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  8628 tactaaatatatggtataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttggg 8529  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||  | ||||| ||| |||||| |||||||||||||||||||| | ||||||||||||||||| || ||||||||||||||    
T  8528 attctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtggattttaggatttaagtagggattttgacaacaat 8443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 5922234 - 5922049
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||||||||| |||| || ||||||||||||||| || |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||    
T  5922234 tactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattttgtctattttggg 5922135  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| ||||| | ||| |||||| |||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||    
T  5922134 attctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 5922049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 11879785 - 11879600
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||  ||||||| ||    
T  11879785 tactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttagg 11879686  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| | ||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||||| ||||||||||||||||    
T  11879685 attctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaat 11879600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 11897201 - 11897016
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||  ||||||| ||    
T  11897201 tactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttagg 11897102  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| | ||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||||| ||||||||||||||||    
T  11897101 attctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaat 11897016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 31424348 - 31424167
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  31424348 tactaaatatatgttataattggtatatagtcataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttggg 31424249  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    ||||| || ||||||||||| |||||||| ||||||||||| ||||||||  ||||||| ||||||||| | ||||||||||    
T  31424248 attcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaa 31424167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 15294855 - 15294672
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||| ||||  |  ||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||||     
T  15294855 tactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggt 15294756  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 194  Q
    |||||||| | ||||||||| |||||| ||||| ||||||||||||||||  ||||||||||||||||||| ||||| ||||||    
T  15294755 attctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 15475224 - 15475041
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||| ||||  |  ||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||||     
T  15475224 tactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggt 15475125  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 194  Q
    |||||||| | ||||||||| |||||| ||||| ||||||||||||||||  ||||||||||||||||||| ||||| ||||||    
T  15475124 attctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 22910146 - 22910316
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||| ||||||||||||||| || |||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||||||  |    
T  22910146 tactaagtatatgttataaatggtatatagtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaag 22910245  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcgg 181  Q
    |||||||| | ||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  22910246 attctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagtcgg 22910316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 19704400 - 19704583
Alignment:
Q  12 actaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggga 111  Q
    ||||||||||||||| ||||| || |||||||||||| |||| |||||||||||||||||||||  ||||||||||| |||||||||| ||||| ||| |    
T  19704400 actaaatatatgttacaaatggtatatagtcataaataacttggtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaa 19704499  T
Q  112 ttctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctag-attttaggatttaagtcggaattttgacaaca 194  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||| ||| | |||||| ||||||||| || ||||||||||||    
T  19704500 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttgaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 3094187 - 3094378
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttata----------agaaatcgtaaaatcacaatcaaaatcaatggattttgt 100  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||          | ||||||||||||| ||||||||||| ||||||||||     
T  3094187 tactaaatatatgttataaatggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatcgatggattttgc 3094286  T
Q  101 ctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    ||||||| |||||||||| ||||||||||| |||||| ||||||||||| ||||||||||  |||||| ||||||||||| |||||||||||    
T  3094287 ctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 29384261 - 29384444
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||||| ||  ||||||||||||||||||||| |||||||| || ||| |||||| ||||||| ||    
T  29384261 tactaaatatatgttataaatggtatatagtcataaatgaattgttttataagaaatcgtaaaatcgcaatcaaa-tcgatgaattttgcctatttttgg 29384359  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    ||| |||| ||||||||||| |||||| ||||||||||||||||||||  ||||||||||||||||  | | |||||||||||||    
T  29384360 attatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatctaagattttaggatttaaacctggattttgacaacaa 29384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 45 - 196
Target Start/End: Complemental strand, 17647144 - 17646993
Alignment:
Q  45 aaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaag 144  Q
    ||||||||  |||||||||||||||| |||| |||||||||||| ||| |||||  |||||||||||||||||| || |||||||| |||||| ||||||    
T  17647144 aaatgactaggtttataagaaatcgttaaataacaatcaaaatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaaggtgaag 17647045  T
Q  145 aaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  17647044 aaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 197
Target Start/End: Complemental strand, 45403211 - 45403028
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||||||||||||| || ||  ||||||||||||| ||| ||||| |||||||||||| ||||||||||| ||||||||||  ||||||| ||||    
T  45403211 taaatatatgttataaatggtatattatcataaatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagatt 45403112  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaatt 197  Q
    || || ||||||| ||| |||||| || ||||||||||||||||| | |||||||| ||||||||||  |||||||||||||||    
T  45403111 cttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaacaatt 45403028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 27836408 - 27836593
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||| |||||||   |||||||||  ||| ||||||  |||||| |     
T  27836408 tactaaatacatgttataaatggtatatagtcataaatgacttagtttataagaaattgtaaaattgtaatcaaaattgatgaattttgcttattttaga 27836507  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| ||||||| |||||||||| ||||| |||  |||||||||||  |||||||||| |||||  ||||||||||||||||    
T  27836508 attctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaattttaggatctaagtttgaattttgacaacaat 27836593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 23142360 - 23142224
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| |||||| ||||||| ||    
T  23142360 tactaaatatatgttataaatggtatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttagg 23142261  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaa 147  Q
    |||||||| ||||||| ||| ||||||  ||||||||    
T  23142260 attctactatggatttcagtcgttgaagttgaagaaa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 6811006 - 6810861
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||  |||||||||| || ||||||| |||||||       
T  6811006 tactaaatatatgttataaatgatatatagttataaatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgat-gattttgcctattttaaa 6810908  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaat 157  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||    
T  6810907 attctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 32424511 - 32424354
Alignment:
Q  17 atatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattcta 116  Q
    |||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||||||||||| ||  |||||||||||||| ||||||||    
T  32424511 atatatgttataaatggtatatagtcataaatgacttagtatataataaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggattcta 32424412  T
Q  117 ctctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaag 177  Q
    || || |||||| | |||   | |||| ||||||  ||||||||| ||||||| |||||||    
T  32424411 ctatgaatttgaatcgtt---aatgaaaaaagtcataaaatcctaaattttagaatttaag 32424354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 7489227 - 7489409
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctat----tt 106  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||  ||||||||||| ||  |||||||||||    ||    
T  7489227 tactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcataaaattgcaatcaaaatcgataaattttgtctattttatt 7489326  T
Q  107 tgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    | | ||||||||  |||||| ||| |||||| |||||||||   ||||||| ||  |||||| ||||||| | || ||||||||||    
T  7489327 tagaattctactacggattttagtcgttgaaggtgaagaaa---gcaaaattctgtattttacgatttaattggggattttgacaa 7489409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 9212202 - 9212295
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctatttt 107  Q
    |||||||| |||||||||| || || ||||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||  |||||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttt 9212295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 24056594 - 24056697
Alignment:
Q  93 gattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    |||||||||||||||||||||   || ||||||||||| ||| || ||||| |||||||||||||||| ||||||||||||||||||   ||||||| ||    
T  24056594 gattttgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataa 24056693  T
Q  193 caat 196  Q
    ||||    
T  24056694 caat 24056697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 6292289 - 6292467
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||| ||||||||| || ||||| ||||||||||||| |||||| |||| |||| | | |||||||||||  || |||||   |||||| | |||    
T  6292289 taaatatattttataaatggtatatagtgataaatgacttagattataataaattgtaagaccgcaatcaaaatcgttgaatttttcttattttagaatt 6292388  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
     |||| ||| ||||||| ||| ||  |||| |||||| ||||||| || |||||| |||||||||||| ||||| ||||    
T  6292389 atactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 477113 - 477176
Alignment:
Q  133 ttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||| | ||||||||||||||    
T  477113 ttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaat 477176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 15761466 - 15761568
Alignment:
Q  94 attttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaac 193  Q
    |||||| ||||||||||||| | || || |||||||| |||||| || || ||| || ||||||||| || ||||||||||||||||  |||||||||||    
T  15761466 attttgcctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaac 15761565  T
Q  194 aat 196  Q
    |||    
T  15761566 aat 15761568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 9212300 - 9212347
Alignment:
Q  149 tcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| |||||||||||||||||||||  ||||||||||||||||    
T  9212300 tcgcaaaaacctagattttaggatttaagtgagaattttgacaacaat 9212347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 29384200 - 29384240
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  29384200 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 29384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 23136396 - 23136353
Alignment:
Q  149 tcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||    
T  23136396 tcgcaaaatcctgaattttaggatttaagtcgggattttgacaa 23136353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 8582284 - 8582244
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||||||||||| |||||||||||| ||| |||||    
T  8582284 tataagaaatcgtaaaattacaatcaaaatcgatgaatttt 8582244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 17647238 - 17647198
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||| |||||||| ||||||||||| |||||||||    
T  17647238 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 17647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 27836352 - 27836392
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  27836352 tataggaaattgtaaaatcacaatcaaaatcgatggatttt 27836392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 44807096 - 44807124
Alignment:
Q  208 aatttaggcttaattgcacttttggcccc 236  Q
    |||||||||||||||||||||||||||||    
T  44807096 aatttaggcttaattgcacttttggcccc 44807124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 24725421 - 24725606
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||| |||||||| |    
T  24725421 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtcaaatcgtaatcaaaattgatggattttgcctattttgcg 24725520  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||||| | |||||||||||||||||| | ||||||||||||||    
T  24725521 attctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggatttaagtctggattttgacaacaat 24725606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 4247541 - 4247353
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||| ||||||||||    
T  4247541 tactaaatatatgttacaaatgatatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttggg 4247442  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaattgt 199  Q
    |||||||| ||||||| ||||||||||||||||||||||  |||||||||  |||||||||||||| | || |||||||||||||||||    
T  4247441 attctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaattgt 4247353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 44944789 - 44944978
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||| ||    
T  44944789 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggattttgactattttagg 44944888  T
Q  111 attctactctggatttgagttgttgaa----agtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| ||||||||| | ||||||    |||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  44944889 attctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 24990015 - 24990201
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||| ||    
T  24990015 tactaaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattttagg 24990114  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaatt 197  Q
    |||||||| ||||||||||| |||| | || ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||    
T  24990115 attctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaatt 24990201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 13 - 196
Target Start/End: Original strand, 26281256 - 26281438
Alignment:
Q  13 ctaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggat 112  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||  |||||||| ||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgttaaatcgcaa-caaaatcgatggattttgcttattttggaat 26281354  T
Q  113 tctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||  ||||||||||| |||||| ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  26281355 tctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 26281438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 14055433 - 14055251
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||| | |||    
T  14055433 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattttagaatt 14055334  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| | ||||||||| |||||| |||||||||||||||||||| | ||||||||||| ||||| || ||||| ||||||||    
T  14055333 ctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaat 14055251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 14365461 - 14365279
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||| | |||    
T  14365461 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattttagaatt 14365362  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| | ||||||||| |||||| |||||||||||||||||||| | ||||||||||| ||||| || ||||| ||||||||    
T  14365361 ctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaat 14365279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 5058714 - 5058530
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||| |||||||  |    
T  5058714 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaag 5058615  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||| |||||||  || |||||| ||||||||| ||||||||| ||  ||||||||||||||||||| |||||||||||||    
T  5058614 attctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 5715469 - 5715290
Alignment:
Q  16 aatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattct 115  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||| |||||    
T  5715469 aatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattct 5715370  T
Q  116 actctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||| || |||| |||||||||| ||| | ||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  5715369 actatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 8346476 - 8346660
Alignment:
Q  11 tactaaatatatgttataaa-tgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgg 109  Q
    |||||||||||||||||||| || || |||| |||| |||||||||||||||||||||||||||||| |||| |||||| |||||||||  |||||||||    
T  8346476 tactaaatatatgttataaaatgatatatagacatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggatttttcctattttgg 8346575  T
Q  110 gattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 194  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||  ||||| ||| | ||||||||||||    
T  8346576 gattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 27221602 - 27221418
Alignment:
Q  12 actaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggga 111  Q
    |||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||||  ||    
T  27221602 actatatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaaga 27221503  T
Q  112 ttctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||| || |||||||| ||||||  |||||||||||||||||||||  ||||||| |||||||| || ||||| ||||||||    
T  27221502 ttctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaat 27221418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 43 - 196
Target Start/End: Original strand, 7730319 - 7730471
Alignment:
Q  43 ataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtga 142  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||| |||||||| ||||||||||||||| || ||||    
T  7730319 ataaatgatttagtttataagaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtga 7730418  T
Q  143 agaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||||||||| ||| |||||||||||||||||| | ||||||||||||||    
T  7730419 agaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaat 7730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 8329995 - 8330174
Alignment:
Q  18 tatatgttataaa-tgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattcta 116  Q
    ||||||||||||| || || |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||| |||||  ||||||||||||||||    
T  8329995 tatatgttataaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaatttttcctattttgggattcta 8330094  T
Q  117 ctctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    || ||||||||| | |||||| |||||||||||||||||||| |  ||||||| ||||| ||| | ||||||||||||||    
T  8330095 ctatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaacaat 8330174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 43 - 196
Target Start/End: Original strand, 9685220 - 9685373
Alignment:
Q  43 ataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtga 142  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||  |||||| | ||||||||||| |||||| ||||    
T  9685220 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtga 9685319  T
Q  143 agaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    | ||||||||||||||||| |||||||||| |||||||  ||||||||||||||    
T  9685320 aaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaat 9685373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 22687649 - 22687793
Alignment:
Q  52 ttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcg 151  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |  ||||||||||||||||||  ||||||||||||    
T  22687649 ttagtttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcg 22687748  T
Q  152 caaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||| ||||  ||||||||||||||||||| ||||||||||||||    
T  22687749 caaattcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 8343743 - 8343929
Alignment:
Q  11 tactaaatatatgttataaa-tgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgg 109  Q
    |||||||||||  ||||||| || || ||| ||||| |||||||||||||||||||||||||||||| |||| |||||  |||||||||   ||||||||    
T  8343743 tactaaatataacttataaaatggtatataatcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggatttttcatattttgg 8343842  T
Q  110 gattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||||||||  |||||||||||||| | |   ||||||||||||||    
T  8343843 gattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggatttaggccaagattttgacaacaat 8343929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 39182397 - 39182260
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaat 157  Q
    |||||||||| |||||||| ||| ||||||| |||||||||| |||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||    
T  39182397 tataagaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaat 39182299  T
Q  158 cctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||||||||||||||||| | |||||| |||||||    
T  39182298 cctagattttaggatttaagtcaggattttgtcaacaat 39182260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 158
Target Start/End: Complemental strand, 17811529 - 17811385
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||| ||||||||| || ||| | |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||   |||    
T  17811529 taaatatattttataaatggtatataattataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaatt 17811430  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatc 158  Q
    ||||| ||||||||||| |||||| ||||| |||||| |||||||    
T  17811429 ctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatc 17811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 20570829 - 20570936
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||  |    
T  20570829 tactaaatatatgttataaatggtatatagtcataaatgacttattttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttttag 20570928  T
Q  111 attctact 118  Q
    ||||||||    
T  20570929 attctact 20570936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 11325137 - 11324988
Alignment:
Q  37 atagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttga 136  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||  ||| |||||| ||||||| | |||||| | ||||||||||| |||||    
T  11325137 atagtcataaatgacttagtttataagaaatcgtaaattcgcaatcaaaat-tatgaattttgcctattttagaattctattatggatttgagtcgttga 11325039  T
Q  137 aagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaatttt 187  Q
    | ||||||||| || ||||||| |  ||||||||||||||||||| |||||    
T  11325038 aggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 11326524 - 11326386
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaat 157  Q
    |||| ||||| |||||||| ||||||||||| || ||||||| |||||||  ||||||||| ||||||| ||| | |||| |||||||||||||||||||    
T  11326524 tataggaaattgtaaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaat 11326425  T
Q  158 cctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||| |||||||||||||||| || ||||||||||||||    
T  11326424 cctaaattttaggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 8571367 - 8571250
Alignment:
Q  72 aaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttagga 171  Q
    ||||| ||||||||||| |||| |||| |||||||| |||||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||| ||    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  172 tttaagtcggaattttga 189  Q
    |||||||||| |||||||    
T  8571267 tttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 176
Target Start/End: Original strand, 27509914 - 27510052
Alignment:
Q  38 tagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaa 137  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||| |||||||   |||||||| | ||||||| | |||| |    
T  27509914 tagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttgga 27510013  T
Q  138 agtgaagaaagtcgcaaaatcctagattttaggatttaa 176  Q
     ||||||||| ||||||||||||  ||||||| ||||||    
T  27510014 tgtgaagaaaatcgcaaaatcctttattttagaatttaa 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 26617420 - 26617605
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttg--tctattttg 108  Q
    ||||||||||||||||||||||    |||||||||||||||||||| || ||||  |||||||||| ||||||||||| || |||||||  | ||||||     
T  26617420 tactaaatatatgttataaatg----atagtcataaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattttgcctatatttta 26617515  T
Q  109 ggattctac--tctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    | |||||||  | || ||||  || |||||| ||||| ||||||||||||||||  ||||||||||| ||||| ||||||| | ||||||    
T  26617516 gaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaattttcaaaacaat 26617605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 21846437 - 21846554
Alignment:
Q  78 caatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaag 177  Q
    ||||||||||| || ||||||  || |||| | |||||||| ||||| ||||| |||||| ||||| ||||||||||||||||  ||||||| |||||||    
T  21846437 caatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatttaag 21846535  T
Q  178 tcggaattttgacaacaat 196  Q
    |||| ||||||||||||||    
T  21846536 tcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 6916961 - 6916878
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||||||||| ||  | | |||||||||||||||| ||||||||||||||||||||| ||||||||| | |||||||||    
T  6916961 taaatatatgttataactggaata-agtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaaccgatggatttt 6916878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 156
Target Start/End: Complemental strand, 1977790 - 1977692
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaa 156  Q
    ||||||||||| ||||||| ||||||||||| | | ||||||  |||||| |||||||||| ||||||||||| |||||| ||| | ||| ||||||||    
T  1977790 tataagaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtggaaaaaatcgcaaaa 1977692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 8630001 - 8630087
Alignment:
Q  110 gattctactctggatttgagttgttgaaagtgaag-aaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||| ||||||||||| |||||| || ||| ||||| ||||||||||||||||| ||| ||||||||  ||||||||||||||    
T  8630001 gattctactatggatttgagtcgttgaa-gttaagtaaagttgcaaaatcctagattttgggacttaagtcgcgattttgacaacaat 8630087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 30294275 - 30294174
Alignment:
Q  93 gattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    ||||||| |||||||| |||| | || ||||||||||| |   || ||||| ||| || ||||||||| ||||||||||||||||| || ||||||||||    
T  30294275 gattttgcctattttgagattttgctatggatttgagtcg---aaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaa 30294179  T
Q  193 caatt 197  Q
    |||||    
T  30294178 caatt 30294174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 21157827 - 21157903
Alignment:
Q  120 tggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||||| |||| ||||||  |||||||||||| |||  |||||| |||||||||| |||||| |||||||||    
T  21157827 tggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagtcagaatttcgacaacaat 21157903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 8329867 - 8329907
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  8329867 tataagaaatcgtaaaatcgcaatcaaaatcaaaggatttt 8329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 8329932 - 8329972
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  8329932 tataagaaatcgtaaaattgcaatcaaaatcaatggatttt 8329972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 21846335 - 21846375
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  21846335 tataagaaatcgtaaaatcacaatcaaaattgatggatttt 21846375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 21846393 - 21846433
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgactta 54  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  21846393 taaatatatgttataaatgatatatagtcataaatgactta 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 26565663 - 26565757
Alignment:
Q  102 tattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||| |||||| || || |||||| | ||| |||||||| |||||  |||||| ||  |||||| |||||||| | ||||||||||||||||    
T  26565663 tattttgagattctgctatgaatttgaatcgttaaaagtgaataaagttacaaaattctgaattttatgatttaaggcagaattttgacaacaat 26565757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 4247597 - 4247557
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  4247597 tataagaaatcataaaatcgcaatcaaaatcgatggatttt 4247557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 4574544 - 4574488
Alignment:
Q  123 atttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtc 179  Q
    |||||| | |||||| ||||  ||||||||||||| || ||||||||||||||||||    
T  4574544 atttgaatcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtc 4574488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 8343690 - 8343730
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||| ||||||||||||| |||||||| ||||||||||||    
T  8343690 tataaaaaatcgtaaaatcgcaatcaaagtcaatggatttt 8343730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 8346354 - 8346394
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||||||| ||| ||||||||||||| |||||||    
T  8346354 tataagaaatcgtaatatcgcaatcaaaatcaaaggatttt 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 8346419 - 8346459
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||| ||||||| |||||| ||||||||||||||    
T  8346419 tataagaaatcataaaatctcaatcataatcaatggatttt 8346459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 14055498 - 14055458
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||| | |||||| |||||||||||||||||||||    
T  14055498 tataagaaattgcaaaatcgcaatcaaaatcaatggatttt 14055458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 14365526 - 14365486
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||| | |||||| |||||||||||||||||||||    
T  14365526 tataagaaattgcaaaatcgcaatcaaaatcaatggatttt 14365486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 5361907 - 5362092
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||||||||     
T  5361907 tactaaatatatgttaaaaatggtatataatcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttgga 5362006  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| ||||||||||| ||||||  |||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  5362007 attctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 13023755 - 13023567
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtcta--ttttg 108  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||||| || |||||| ||||  |||||    
T  13023755 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttg 13023656  T
Q  109 ggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctaga-ttttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||||| |||||||||||  ||||| ||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||    
T  13023655 ggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaat 13023567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 9770297 - 9770112
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||||||||| |||| || |||||||||| | ||||||||||||||||||||||||||| ||||||||||  || ||||||||||||||| ||    
T  9770297 tactaaatatatgttatgaatggtatatagtcataagtaacttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattttgtctattttagg 9770198  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| ||||||||||| |||||| ||||| |||||| |||||||||||||||||| ||||||||||  ||||| ||||||||    
T  9770197 attctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctagattttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 8889413 - 8889228
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||| ||||||||| || ||||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||||    
T  8889413 tactaaatatatattataaatggtatatagtcataaacgacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttggg 8889314  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||| | || |||||||| |||||  ||||||||| || ||||||||| |||||||||||||||||||| ||||||||| ||||    
T  8889313 attctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctggattttaggatttaagtcgggattttgacatcaat 8889228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 10143084 - 10142899
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||| |||||| || || |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  10143084 tactaaatatatattataattggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgga 10142985  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||| |||| |||| ||||||  ||||| ||| |||||||||||||||  || ||||||| ||||||||||| ||||| ||||||||    
T  10142984 attatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaacaat 10142899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 17466261 - 17466080
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||||||||  |||||| |||||    
T  17466261 taaatatatgttataaatggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaatctaaatcgatggattttgcttattttaggatt 17466162  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    ||| | |||||||||||  || ||  |||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  17466161 ctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 36121009 - 36120824
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||| ||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||  |||||| |     
T  36121009 tactaaatatattttataaatggtatatagtcataaatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttaga 36120910  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||| || | ||||||| ||| |||||| ||||||||| ||||||||||||| ||||||  |||||| |||||||||||||||||||    
T  36120909 attttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaacaat 36120824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 5375849 - 5375666
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||       
T  5375849 tactaaatatatgttataaatgatatatggtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctattttaaa 5375750  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 194  Q
    |||||| | || |||| ||| |||||| |||||||||||||||||||| || ||||||| ||||| || || ||||||||||||    
T  5375749 attctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 9911355 - 9911541
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||||| ||    
T  9911355 tacttaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttagg 9911454  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttagga-tttaagtcggaattttgacaacaat 196  Q
    |||||||| |||||||  |  |||||| ||||||||||| |||||||| |  ||||||||| ||||| |||| |||| |||||||||    
T  9911455 attctactatggatttaggccgttgaaggtgaagaaagttgcaaaatcttgaattttaggattttaaatcgggatttagacaacaat 9911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 43 - 196
Target Start/End: Original strand, 13551598 - 13551751
Alignment:
Q  43 ataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtga 142  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||  |||||| | ||||||||||| |||||| ||||    
T  13551598 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtga 13551697  T
Q  143 agaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    | ||||||||||||||||| |||||||||| |||||||  ||||||||||||||    
T  13551698 aaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaat 13551751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 37240442 - 37240262
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||||| |||||||| || | |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| ||| || ||||||||||    
T  37240442 tactaaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattatgcctattttggg 37240343  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
     ||||||| ||||||||||| |||||| ||||| ||||||| ||    ||| |||||||||||||||| || ||||| ||||||||    
T  37240342 -ttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggattttaacaacaat 37240262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 23064905 - 23065092
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgactta--gtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttg 108  Q
    |||||||||||||||||||||| || |  |||||||||||||||  |||||||||||||||||||||  |||| |||||| ||||||||   |||||||     
T  23064905 tactaaatatatgttataaatgatatagggtcataaatgacttatagtttataagaaatcgtaaaattgcaattaaaatcgatggatttgacctatttta 23065004  T
Q  109 ggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    | |||||||  ||||||||||| |||||| |||||||||||  |||||| || |||||||| |||||||||||  |||| ||||||||    
T  23065005 gaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactggattttagaatttaagtcggggttttaacaacaat 23065092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 8011212 - 8011346
Alignment:
Q  63 gaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctag 162  Q
    ||||||| |||||| ||||||||||| ||| ||||||   |||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||      
T  8011212 gaaatcgcaaaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 8011311  T
Q  163 attttaggatttaagtcggaattttgacaacaatt 197  Q
    |||||||||||| ||| || |||||||||||||||    
T  8011312 attttaggatttgagttgggattttgacaacaatt 8011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 7044831 - 7044728
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    ||||||||  |||||||||||||| || ||||||||||| |||||| ||||| ||||| |||||||| | |||||||||||||||||||| |||||||||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgaca 7044732  T
Q  192 acaa 195  Q
    ||||    
T  7044731 acaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 18459733 - 18459837
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    |||||||| ||||||| ||||||| || ||||||||||| |||||||||||| | |||||||||||| | ||||||||||||| |||||| ||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  192 acaat 196  Q
    |||||    
T  18459833 acaat 18459837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 6347088 - 6347189
Alignment:
Q  91 tggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgac 190  Q
    ||||||||  |||||||| || ||  || ||||||||||| |||||| || || ||||| |||||||||| ||||||||||||||||| |||||||||||    
T  6347088 tggattttacctattttgagactcggctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgac 6347187  T
Q  191 aa 192  Q
    ||    
T  6347188 aa 6347189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 196
Target Start/End: Complemental strand, 4156866 - 4156763
Alignment:
Q  93 gattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    |||||||  |||||| ||||||||||   ||||||||| ||| || ||||| ||||||  ||||||||| |||||| |||||||||||| ||||||||||    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T
Q  193 caat 196  Q
    ||||    
T  4156766 caat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 24719610 - 24719517
Alignment:
Q  103 attttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| ||||||| || ||||||||||| |||||| ||||| |||||||||||||| |  ||||||| | ||||||||  ||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaat 24719517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    |||||||| |||||||||||||||||| ||| ||||||| | | ||  |||| |||||| |||||| ||  ||||||||||||||||||| ||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  192 a 192  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 9149813 - 9149864
Alignment:
Q  145 aaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| |||||    
T  9149813 aaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 7452523 - 7452420
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    |||||||| |||| || ||| || ||| |||||| |||| |||||| ||||| ||||| ||||||| || |||||||| ||||||||||| ||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggatt-gagtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  192 acaat 196  Q
    |||||    
T  7452424 acaat 7452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 4157090 - 4157053
Alignment:
Q  61 aagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  4157090 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 5375906 - 5375866
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  5375906 tataggaaattgtaaaatcacaatcaaaatcgatggatttt 5375866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 7045004 - 7044964
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||||||||||  ||||||||||| |||||||||    
T  7045004 tataagaaatcgtaaaatatcaatcaaaatcgatggatttt 7044964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 8744087 - 8744131
Alignment:
Q  152 caaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||||  ||||| |||||||||||||||||| |||||||||    
T  8744087 caaaatcctgaatttttggatttaagtcggaatttcgacaacaat 8744131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 9954979 - 9955164
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||| ||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||    
T  9954979 tactgaatatatgttataaatggtatatagtcataaatgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggg 9955078  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||  ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||    
T  9955079 attctacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaat 9955164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 13276210 - 13276395
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||||| ||||||| ||    
T  13276210 tactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttagg 13276309  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| |||||||  || ||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  13276310 attctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 9352007 - 9352192
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||| ||||||||||| | |||||||||||||||||||    
T  9352007 tactaaatatatgttataaatggtatatagtcaaaaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattttgtctattttggg 9352106  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    | ||| || | |||||||||  ||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  9352107 actctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaat 9352192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 13100376 - 13100195
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||| |||||||| ||||||||||| |||| ||||| ||||||| ||    
T  13100376 tactaaatatatgttacaaatggtatatagtcataaatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatggtttttgcctattttagg 13100277  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    |||||||| ||||||||||| |||||| ||||||||||||| |||||||| |||||||| |||||||| || ||||||||||    
T  13100276 attctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaa 13100195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 9327157 - 9327344
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaa--tgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttg 108  Q
    |||||||||||| ||||||||| || ||||||| |||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  9327157 tactaaatatatattataaatggtatatagtcaaaaaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttg 9327256  T
Q  109 ggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| |||| | ||||||||| |||||| ||| |||||||||||||| |||| ||||||||||||||||| | ||||| ||||||||    
T  9327257 ggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaattttaggatttaagtcaggattttaacaacaat 9327344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 42180009 - 42180193
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| ||||||||      
T  42180009 tactatatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattttgcctattttgaa 42180108  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||| ||||||||| | |||||| | ||||||||||||||||||||  ||||||| |||||||| || |||||||||||||    
T  42180109 attctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 12513458 - 12513283
Alignment:
Q  19 atatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctact 118  Q
    |||||||||| ||| || |||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  ||||||  |||| ||||    
T  12513458 atatgttatatatggtatatagtcgtaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttact 12513359  T
Q  119 ctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 194  Q
     ||||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  12513358 atggatttgagtcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 197
Target Start/End: Complemental strand, 23528838 - 23528655
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    |||||||| |||||||||| || ||||||||||||||||| |||||||||||||||||||||| || |||||||| || ||||||| ||||||| |||||    
T  23528838 taaatatacgttataaatggtatatagtcataaatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagattttgcctattttaggatt 23528739  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaatt 197  Q
    ||||| ||||||||||| ||||||  |||||||||||||||||||||  |||||| ||||||||| || |||||||||||||||    
T  23528738 ctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaatt 23528655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 18304755 - 18304940
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||| ||||| |||| || ||||||||||||||||||| ||||||||||||||||| || ||||||||||  ||||||||||||||||||| |    
T  18304755 tactaaatatacgttatgaatggtatatagtcataaatgacttagcttataagaaatcgtaaa-tcgcaatcaaaattgatggattttgtctattttgag 18304853  T
Q  111 attctactctggatttgagttgtt-gaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| || |||||||| ||| ||| ||||||||||||||||||| || ||||||||||||||||| || ||||||||||||||    
T  18304854 attctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagttgggattttgacaacaat 18304940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 25146713 - 25146897
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||| |||||||||  || |||||||||||| |||||||||||||||||||||||| || |||| |||||  ||| | |||||||||||||||    
T  25146713 tactaaatatacgttataaattgtatatagtcataaataacttagtttataagaaatcgtaaa-tcgcaattaaaattgatgtactttgtctattttggg 25146811  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| || |||||||| |||||| ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||    
T  25146812 attctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaat 25146897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 16125399 - 16125580
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || ||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||  |    
T  16125399 tactaaatatatgttataaatggtatatattcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaag 16125498  T
Q  111 attctactctggatttgagttgttgaaagtg---aagaaagtcgcaaaatcctagattttaggatttaagtcggaattttga 189  Q
    ||| |||| |||||||  || |||||| |||   |||||||||||||||||||  ||||||||||||||||| | |||||||    
T  16125499 attttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcctgaattttaggatttaagtcaggattttga 16125580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 9128784 - 9128969
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||| |||||||||||||| || ||||||| |||| ||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||  |    
T  9128784 tactaaagatatgttataaatggtatatagtcaaaaataacttagtttataagaaatcgtcaaatcgcaatcaaaatcgatgaattttgtctattttaag 9128883  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| |  |||||||| ||| || |||||||||||||||| ||||||  |||||||||||||||||  ||||| ||||||||    
T  9128884 attctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 19009898 - 19010073
Alignment:
Q  19 atatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctact 118  Q
    |||||||||||||| || ||||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||  |||||| | ||| ||||    
T  19009898 atatgttataaatggtatatagttataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttact 19009997  T
Q  119 ctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 194  Q
     ||||||| |||  ||||| ||||| ||||||||||||||||  ||||||||||||||||| | ||||||||||||    
T  19009998 atggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 21846218 - 21846397
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||  || ||||| |||||||||   |||||| | ||||   |||||| ||||||||||| ||||||||| ||||||||| |    
T  21846218 tactaaatatatgttataaattatatatagttataaatgac---gtttatgaaaaat---aaaatcgcaatcaaaatcgatggattttttctattttgag 21846311  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| ||||||||||| |||||| ||||| |||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  21846312 attctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttaggatttaactcgggattttgacaacaat 21846397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 41032661 - 41032799
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaat 157  Q
    |||||||||| |||||||| |||| |||||| |||||||||| ||||||| | |||||||| ||||||||||| |||||| ||||||||| |||||||||    
T  41032661 tataagaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaat 41032760  T
Q  158 cctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||  ||| || |||||||||||  ||||||||||||||    
T  41032761 cctgaattctacgatttaagtcgagattttgacaacaat 41032799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 17869694 - 17869873
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||||||| |||||  || || || ||||| ||||||||||| |||||||||||||||  ||||||||||| | | |||||| ||||||| ||    
T  17869694 tactaaatatatgttgtaaatagtatatggttataaaagacttagtttaaaagaaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttagg 17869793  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||| |||||||  || || ||| |||||||||||||||||||||     |||| |||||||||| | |||||||||||||    
T  17869794 attctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaatcc-----tttaagatttaagtcaggattttgacaacaa 17869873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 14074404 - 14074500
Alignment:
Q  101 ctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaatt 197  Q
    |||||||  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaatt 14074500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 32881512 - 32881416
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctatttt 107  Q
    |||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||| |||||| |||||||    
T  32881512 tactaaatatatgttataaatggtatatagtcatgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttt 32881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 18228380 - 18228279
Alignment:
Q  16 aatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattct 115  Q
    ||||||||||||||||| || |||||||||||| ||||| ||||||||||||| ||||||| ||||||||||  |||||||||| |||||||||||||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaaatc-caatcaaaattgatggattttgcctattttgggattct 18228282  T
Q  116 act 118  Q
    |||    
T  18228281 act 18228279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 47786044 - 47785958
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattt 97  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||    
T  47786044 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaattgcaatcaaaaccgatggattt 47785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  121 ggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 196
Target Start/End: Original strand, 17055995 - 17056128
Alignment:
Q  63 gaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctag 162  Q
    |||||||||||||| ||||||||||| |||||||||   ||||||   |||||||| ||||| ||||| |||||| ||| ||||| | |||||||||| |    
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctgg 17056094  T
Q  163 attttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||||||||| || | |||||||| |||||    
T  17056095 attttaggatttaaatcaggattttgactacaat 17056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 18337547 - 18337650
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    |||||||| |||||||||| |||| || ||||||||||| |||||| ||||| ||||| |||||||||| ||||||||| | |||||||| |||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttagg-tataagtcgggattttgaca 18337645  T
Q  192 acaat 196  Q
    |||||    
T  18337646 acaat 18337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 12800623 - 12800710
Alignment:
Q  109 ggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| |||| | ||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||| || ||||| ||||||||    
T  12800623 ggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 27917477 - 27917578
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    ||||||||  ||| ||| |||||| || || ||||| ||||||||| || || ||| |||||||||||||||||| || ||||||||||| |||||||||    
T  27917477 ggattttgcttatcttgtgattctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgaca 27917576  T
Q  192 ac 193  Q
    ||    
T  27917577 ac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 24117111 - 24117007
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    ||||||||| | ||||||||||||| | |  |||||| | |||||| ||||| ||||| | |||||| || ||||||| |||||| | ||||||||||||    
T  24117111 ggattttgtttgttttgggattctaatataaatttgaatcgttgaaggtgaataaagttgtaaaatcttaaattttagaatttaaattggaattttgaca 24117012  T
Q  192 acaat 196  Q
    |||||    
T  24117011 acaat 24117007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 34478835 - 34478899
Alignment:
Q  132 gttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||| |||||||||||| |||||||| | |||||| |||||||||||| ||||| ||||||||    
T  34478835 gttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaat 34478899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 8772809 - 8772719
Alignment:
Q  92 ggattttgtctatttt-gggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcgg 181  Q
    ||||||||||| |||| |||| ||| || ||||||||||||||||||  |  | ||||||||||||| || |||||| |||||||||||||    
T  8772809 ggattttgtctttttttgggactctgctatggatttgagttgttgaagctacacaaagtcgcaaaattctggattttgggatttaagtcgg 8772719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 22789483 - 22789449
Alignment:
Q  64 aaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||||||||||||||||||| |||||||    
T  22789483 aaatcgtaaaatcacaatcaaaatcaaaggatttt 22789449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 13100431 - 13100391
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  13100431 tataagaaatcttaaaatcgcaatcaaaatcgatggatttt 13100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 32881561 - 32881521
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    |||||||||| |||||||| |||||||||||||||| ||||    
T  32881561 tataagaaattgtaaaatcgcaatcaaaatcaatggctttt 32881521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 4e-62; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 31237926 - 31238106
Alignment:
Q  16 aatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattct 115  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||  ||||||    
T  31237926 aatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattct 31238025  T
Q  116 actctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||| || |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  31238026 actatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaacaat 31238106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 36430033 - 36429848
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||| ||||| || |||||||||||| |||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||| |    
T  36430033 tactaaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttgag 36429934  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| || || | |||||| |||||| ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  36429933 attctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggattttgacaacaat 36429848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 30432593 - 30432419
Alignment:
Q  22 tgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctg 121  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| ||||||||| ||    
T  30432593 tgttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatg 30432494  T
Q  122 gatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||| |||||| | ||||||||||| ||||||||||||||||| |||||| || | ||||||||||||||    
T  30432493 gatttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaat 30432419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 1404966 - 1404783
Alignment:
Q  13 ctaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggat 112  Q
    |||| ||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  || ||| ||||    
T  1404966 ctaagtatatgttataaatggtgtatagtcataaatgacttagtatataagaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggat 1404867  T
Q  113 tctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||  ||||||| ||| |||||| |||||||||||| |||||||||| ||||||| ||||||||||| ||||||||||||||    
T  1404866 tctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaat 1404783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 35565898 - 35566082
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||  || ||||||||||||||||| ||||||||||||||||||||   ||||||||||| |||||||||| ||||||||||    
T  35565898 tactaaatatatgttataaattgtatatagtcataaatgactttgtttataagaaatcgtaaaactgcaatcaaaatcgatggattttgcctattttggg 35565997  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaa 195  Q
    |||||||  |||||||||||  |||||  |||||||||||||||||||||  |||||  ||||||||| || |||||||||||||    
T  35565998 attctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 194
Target Start/End: Complemental strand, 31578189 - 31578007
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||  ||||||||||  ||||||||||  |||||| ||    
T  31578189 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataataaatcgtaaaattgcaatcaaaattgatggattttgcttattttagg 31578090  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 194  Q
    ||||||||  |||||| | | |||||| ||||||||| |||||||||| || ||||||  ||||||||||| ||||||||||||    
T  31578089 attctact-aggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 15588796 - 15588978
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    |||||||||||||  ||||||| || ||| ||||||||||||||||||||| |||||||||||||| |||| |||| | || |||||||||||||||| |    
T  15588796 tactaaatatatg--ataaatggtatataatcataaatgacttagtttatatgaaatcgtaaaatcgcaataaaaaacgattgattttgtctattttgag 15588893  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| || ||||||||||||||| |||||||||| |||||||||||  |||||| || ||||||||| ||||||||| ||||    
T  15588894 attctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcgggattttgacagcaat 15588978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 23863321 - 23863450
Alignment:
Q  67 tcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattt 166  Q
    |||||||||| ||| ||||||| |||||||||| |||||||| ||||||||| ||||||| ||| |||||||||||||||||||||||||| || |||||    
T  23863321 tcgtaaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattt 23863420  T
Q  167 taggatttaagtcggaattttgacaacaat 196  Q
    ||| ||||||||||| ||||||||||||||    
T  23863421 tagaatttaagtcgggattttgacaacaat 23863450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 196
Target Start/End: Complemental strand, 20063896 - 20063714
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    |||||| |||| ||||||| || | |||||||||||| |||||| |||||||| ||||||||| |||| |||||| ||| |||||| |||||||||||||    
T  20063896 taaatacatgtgataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggatt 20063797  T
Q  114 ctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||| ||||||| |||  |||||  ||||||||  ||||||| | | ||||||||| |||||||||| ||||||||||||||    
T  20063796 ctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaat 20063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 1690675 - 1690774
Alignment:
Q  14 taaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggatt 113  Q
    ||||||||| ||||||||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||| | |||||||||||||    
T  1690675 taaatatattttataaatggtatatagtcataaaagacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgggtttcgcctattttgggatt 1690774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 1690784 - 1690891
Alignment:
Q  89 aatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttg 188  Q
    ||||| ||||| ||||||||||||| |||| ||||| ||||| || ||| |||||||||||| |||||||||| |||||| ||||||||||||| |||||    
T  1690784 aatgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttg 1690883  T
Q  189 acaacaat 196  Q
    ||||||||    
T  1690884 acaacaat 1690891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 19491982 - 19491854
Alignment:
Q  70 taaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattt--t 167  Q
    ||||||| ||||||||||| |||||||||  ||||||||| ||||| || ||||||||||| ||| ||  |||||||||||||||||||||||||||  |    
T  19491982 taaaatcgcaatcaaaatcgatggattttacctattttgg-attctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttat 19491884  T
Q  168 aggatttaagtcggaattttgacaacaatt 197  Q
    ||||||||| |||  |||||||||||||||    
T  19491883 aggatttaattcgagattttgacaacaatt 19491854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 194
Target Start/End: Original strand, 25539222 - 25539353
Alignment:
Q  63 gaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctag 162  Q
    |||||||| ||||| || |||||||| ||||||||||  |||||| ||||||| || ||||||| ||| |||||| ||||||||| | ||||| || |      
T  25539222 gaaatcgttaaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttga 25539321  T
Q  163 attttaggatttaagtcggaattttgacaaca 194  Q
    |||||||||||||| |||| ||||| ||||||    
T  25539322 attttaggatttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 31023325 - 31023255
Alignment:
Q  94 attttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagat 164  Q
    |||||| ||||||| |||||||||| || |||||||| |||||||||||| ||||||||||||||||||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcctagat 31023255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 5395674 - 5395777
Alignment:
Q  93 gattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    ||||||| |||||||| |||||| || |||||||||||  || ||  |||| ||||||||||||||||| |||||| |||||| |||  |||||||||||    
T  5395674 gattttgcctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaa 5395773  T
Q  193 caat 196  Q
    ||||    
T  5395774 caat 5395777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 16766804 - 16766710
Alignment:
Q  102 tattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||| ||||||| || ||||||||| | |||||| ||||| ||| ||| ||||||||| |||||| ||||||||||  |||||||||||||||    
T  16766804 tattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 29660937 - 29660893
Alignment:
Q  152 caaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  29660937 caaaatcctagattttaggatttaagtcggatttttgacaacaat 29660893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 17995157 - 17995055
Alignment:
Q  94 attttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaac 193  Q
    |||||| ||||||||| ||| | ||  | |||||||| |||||  ||||| ||| ||||||||| || ||||||||| |||||||||||||||| |||||    
T  17995157 attttgcctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaac 17995058  T
Q  194 aat 196  Q
    |||    
T  17995057 aat 17995055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 13502561 - 13502601
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  13502561 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 34841648 - 34841584
Alignment:
Q  104 ttttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagatttta 168  Q
    |||||| ||||| || ||||||||||| |||||| ||||| ||||||||| ||||||| ||||||    
T  34841648 ttttggtattctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcctaaatttta 34841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 35565845 - 35565885
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  35565845 tataagaaatcataaaatcacaatcaaaatcgatggatttt 35565885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 16767026 - 16766987
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggattt 97  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  16767026 tataagaaatcgtaaaatcgcaatcaaaatcaaaggattt 16766987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 13503095 - 13503156
Alignment:
Q  120 tggatttgagttgttgaaagtgaagaaagtcgcaaaatcctaga-ttttaggatttaagtcg 180  Q
    ||||||||||  |||||||||||| ||  ||||||||||||||| ||||| |||||||||||    
T  13503095 tggatttgagccgttgaaagtgaataagatcgcaaaatcctagatttttaagatttaagtcg 13503156  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 31025868 - 31025897
Alignment:
Q  207 aaatttaggcttaattgcacttttggcccc 236  Q
    ||||||||||||||||||||||||||||||    
T  31025868 aaatttaggcttaattgcacttttggcccc 31025897  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 15627699 - 15627659
Alignment:
Q  152 caaaatcctagattttaggatttaagtcggaattttgacaa 192  Q
    ||||||| || ||||||||||||||||||| ||||||||||    
T  15627699 caaaatcataaattttaggatttaagtcgggattttgacaa 15627659  T

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Target: scaffold0042 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 93649 - 93833
Alignment:
Q  11 tactaaatatatgttataaatgttacat-agtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttgg 109  Q
    ||||||||||||||||| |||  || || ||||||||| |||||| |||| |||||||||||||||| ||||||||||| |||||||| | ||||||| |    
T  93649 tactaaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttag 93748  T
Q  110 gattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
     ||||| || |||||||||||||||||  ||||||||| |  |||||| || |||||||||||||||||||| ||||||||||||||    
T  93749 aattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtcgggattttgacaacaat 93833  T

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Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 93593 - 93633
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 98  Q
    ||||| ||||||||||||| ||||||||||| |||||||||    
T  93593 tataataaatcgtaaaatcgcaatcaaaatcgatggatttt 93633  T

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Target: scaffold0417 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 7399 - 7584
Alignment:
Q  11 tactaaatatatgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcaatggattttgtctattttggg 110  Q
    ||||||||||||||| ||| || || ||| |||||||| |||| |||||||||||||||||||||| |||| |||||| ||| |||||| ||||||| ||    
T  7399 tactaaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcgtaaaatcgcaattaaaatcgatgaattttgcctattttagg 7498  T
Q  111 attctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    |||||||| |||||||   | |||||| || |||||||||||||||||||  ||||||| ||||||||||| ||| | ||||||||    
T  7499 attctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattctaacaacaat 7584  T

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Target: scaffold0510 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 91 - 215
Alignment:
Q  58 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt-gtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaa 156  Q
    |||||||||| |||||||| ||||||||||| ||||||||| | ||||||| | ||| |||| ||||||||||| |||||| ||||||||||||||||||    
T  91 tataagaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaa 190  T
Q  157 tcctagattttaggatttaagtcgg 181  Q
    ||||  |||||||||||||||||||    
T  191 tcctgcattttaggatttaagtcgg 215  T

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Target: scaffold0048 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 48825 - 48917
Alignment:
Q  104 ttttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||||||  | ||||||||||| |||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  48825 ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaat 48917  T

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Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 37191 - 37295
Alignment:
Q  92 ggattttgtctattttgggattctactctggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgaca 191  Q
    |||||||  |||||||  |||||| || |||||||||||||||||| ||||| ||| | ||||||| ||  ||||||  ||||||||||| |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  192 acaat 196  Q
    |||||    
T  37291 acaat 37295  T

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Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 58736 - 58790
Alignment:
Q  21 atgttataaatgttacatagtcataaatgacttagtttataagaaatcgtaaaat 75  Q
    ||||||||| || || |||||||||||||| ||||||||||||||||||||||||    
T  58736 atgttataagtggtatatagtcataaatgatttagtttataagaaatcgtaaaat 58790  T

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Target: scaffold0603 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 9073 - 9149
Alignment:
Q  120 tggatttgagttgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 196  Q
    ||||||||||| |||||| ||||| ||| || |||||||||| ||||||  |||||| || | ||||||||||||||    
T  9073 tggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaat 9149  T

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