View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4698_low_10 (Length: 249)
Name: NF4698_low_10
Description: NF4698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4698_low_10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 22 - 249
Target Start/End: Original strand, 54673649 - 54673876
Alignment:
| Q |
22 |
tatatatttaaacacttgtttgagttgtcgtacaatgggctagtctaagggtcaagtagttcaagctagggttttttagtcctcaaaattttggaccaaa |
121 |
Q |
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| T |
54673649 |
tatatatttaaacacttgtttgagttgtcgtacaatgggctagtctaagggtcaagtagttcaagctagggttttttagtcctcaaaattttggaccaaa |
54673748 |
T |
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| Q |
122 |
aaatggcctcaatttaattattttataaataatgacaaattagttataaatgttgaccgttgagttagtcatggcgatcctatctatcctcagttctaac |
221 |
Q |
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| T |
54673749 |
aaatggcctcaatttaattattttataaataatgacaaattagttataaatgttgaccgttgagttagtcatggcgatcctatctatcctcggttcaaac |
54673848 |
T |
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| Q |
222 |
ttatactcgacaaaacttaattttttat |
249 |
Q |
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| T |
54673849 |
ttaaactcggcaaaacttgattttttat |
54673876 |
T |
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