View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4699-Insertion-5 (Length: 790)

Name: NF4699-Insertion-5
Description: NF4699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4699-Insertion-5
NF4699-Insertion-5
[»] chr4 (85 HSPs)
chr4 (571-763)||(29584820-29585012)
chr4 (8-291)||(29585294-29585578)
chr4 (575-693)||(14602646-14602764)
chr4 (356-479)||(29585104-29585229)
chr4 (572-693)||(12624692-12624813)
chr4 (571-693)||(25477221-25477343)
chr4 (573-718)||(31840069-31840212)
chr4 (571-693)||(38136351-38136473)
chr4 (571-693)||(56373331-56373453)
chr4 (571-714)||(30153209-30153352)
chr4 (571-698)||(39237576-39237703)
chr4 (571-693)||(20262381-20262503)
chr4 (575-693)||(37175013-37175130)
chr4 (575-712)||(20291317-20291454)
chr4 (572-693)||(22750830-22750951)
chr4 (580-693)||(28116501-28116614)
chr4 (575-693)||(41920029-41920147)
chr4 (572-693)||(26186743-26186864)
chr4 (572-693)||(51787767-51787888)
chr4 (571-693)||(19654424-19654546)
chr4 (588-702)||(22651451-22651565)
chr4 (571-693)||(31486484-31486606)
chr4 (571-693)||(33246484-33246606)
chr4 (575-693)||(37625116-37625234)
chr4 (571-693)||(52198715-52198837)
chr4 (572-693)||(20185644-20185765)
chr4 (571-711)||(48472482-48472623)
chr4 (575-714)||(5416860-5416997)
chr4 (581-693)||(5536493-5536605)
chr4 (571-711)||(24072745-24072885)
chr4 (575-690)||(34543701-34543816)
chr4 (571-698)||(46729297-46729423)
chr4 (571-693)||(13096529-13096650)
chr4 (575-693)||(50782774-50782892)
chr4 (571-711)||(16070409-16070549)
chr4 (571-698)||(54438501-54438628)
chr4 (571-693)||(41945760-41945881)
chr4 (608-693)||(3094178-3094263)
chr4 (571-698)||(52226010-52226137)
chr4 (575-693)||(5448658-5448776)
chr4 (571-693)||(5932883-5933004)
chr4 (571-692)||(39197021-39197143)
chr4 (571-665)||(43800832-43800926)
chr4 (571-712)||(45628062-45628203)
chr4 (571-712)||(26203107-26203248)
chr4 (575-693)||(7002178-7002297)
chr4 (575-693)||(39414232-39414348)
chr4 (572-693)||(43509079-43509198)
chr4 (571-693)||(20116448-20116568)
chr4 (582-692)||(10541255-10541365)
chr4 (575-677)||(31937383-31937485)
chr4 (580-693)||(10602206-10602316)
chr4 (594-702)||(3684198-3684306)
chr4 (580-687)||(20791929-20792036)
chr4 (571-650)||(40411330-40411409)
chr4 (571-664)||(5168004-5168097)
chr4 (575-692)||(52552502-52552619)
chr4 (588-657)||(52768903-52768972)
chr4 (575-693)||(54701281-54701396)
chr4 (580-670)||(32236850-32236940)
chr4 (571-693)||(20293739-20293865)
chr4 (571-693)||(20016521-20016639)
chr4 (571-637)||(21121019-21121085)
chr4 (575-660)||(32107874-32107959)
chr4 (571-693)||(51918643-51918760)
chr4 (571-659)||(41459617-41459705)
chr4 (580-664)||(44812603-44812687)
chr4 (587-685)||(18683538-18683634)
chr4 (620-699)||(23928323-23928401)
chr4 (575-626)||(31917440-31917491)
chr4 (622-693)||(45079849-45079920)
chr4 (571-633)||(30866712-30866774)
chr4 (573-690)||(31294155-31294272)
chr4 (580-693)||(52977553-52977665)
chr4 (571-683)||(54359690-54359801)
chr4 (578-641)||(36513304-36513367)
chr4 (639-693)||(30049427-30049481)
chr4 (587-661)||(52676048-52676122)
chr4 (575-648)||(21171765-21171838)
chr4 (582-639)||(31552190-31552246)
chr4 (571-631)||(20540029-20540088)
chr4 (575-626)||(26170258-26170309)
chr4 (651-712)||(32866481-32866542)
chr4 (575-648)||(34643436-34643508)
chr4 (577-626)||(53484437-53484486)
[»] scaffold0005 (1 HSPs)
scaffold0005 (575-693)||(214614-214732)
[»] chr7 (66 HSPs)
chr7 (572-718)||(48193586-48193732)
chr7 (571-693)||(6376120-6376242)
chr7 (575-693)||(31373689-31373807)
chr7 (571-700)||(25750357-25750486)
chr7 (571-698)||(36116312-36116439)
chr7 (571-704)||(37673722-37673855)
chr7 (571-693)||(1324704-1324826)
chr7 (571-693)||(4089487-4089609)
chr7 (575-693)||(21388238-21388356)
chr7 (587-712)||(20123427-20123552)
chr7 (580-693)||(21801052-21801165)
chr7 (572-693)||(26632842-26632963)
chr7 (575-708)||(46783832-46783965)
chr7 (571-714)||(21809634-21809777)
chr7 (571-693)||(48610123-48610245)
chr7 (572-693)||(10685081-10685202)
chr7 (580-693)||(37491615-37491728)
chr7 (602-711)||(40211295-40211404)
chr7 (571-699)||(27213477-27213605)
chr7 (572-702)||(5334383-5334514)
chr7 (573-711)||(48767542-48767681)
chr7 (587-693)||(2276580-2276686)
chr7 (571-693)||(19236054-19236176)
chr7 (575-693)||(40263707-40263825)
chr7 (571-711)||(35128364-35128502)
chr7 (575-693)||(40740946-40741066)
chr7 (571-693)||(27162890-27163011)
chr7 (572-708)||(27169993-27170128)
chr7 (587-702)||(21752515-21752630)
chr7 (573-675)||(21392882-21392984)
chr7 (572-702)||(23876024-23876154)
chr7 (573-711)||(35960356-35960494)
chr7 (571-693)||(37048031-37048153)
chr7 (575-698)||(18122033-18122156)
chr7 (571-693)||(26200955-26201077)
chr7 (571-693)||(33181291-33181413)
chr7 (571-693)||(36726161-36726282)
chr7 (575-693)||(49100667-49100785)
chr7 (575-693)||(28663752-28663869)
chr7 (571-712)||(29636028-29636168)
chr7 (582-685)||(29992979-29993082)
chr7 (575-670)||(43465134-43465229)
chr7 (571-690)||(43601152-43601270)
chr7 (571-693)||(42983601-42983725)
chr7 (575-693)||(42993179-42993297)
chr7 (572-677)||(44648703-44648810)
chr7 (602-699)||(10595117-10595212)
chr7 (608-679)||(41672591-41672662)
chr7 (571-632)||(13907730-13907791)
chr7 (571-711)||(29723439-29723579)
chr7 (615-711)||(20124166-20124262)
chr7 (571-643)||(47458173-47458245)
chr7 (580-679)||(10408564-10408663)
chr7 (628-687)||(36195393-36195452)
chr7 (575-634)||(37136236-37136295)
chr7 (575-680)||(25828130-25828242)
chr7 (587-693)||(19477415-19477524)
chr7 (580-639)||(24700692-24700751)
chr7 (571-680)||(38729678-38729786)
chr7 (571-643)||(28038875-28038948)
chr7 (602-693)||(4068395-4068486)
chr7 (241-291)||(40101769-40101819)
chr7 (575-656)||(43026053-43026135)
chr7 (654-711)||(12645534-12645590)
chr7 (607-640)||(12645602-12645635)
chr7 (16-61)||(33010345-33010390)
[»] chr5 (67 HSPs)
chr5 (573-714)||(4745101-4745243)
chr5 (575-693)||(3559017-3559135)
chr5 (572-712)||(39690473-39690613)
chr5 (571-698)||(25017660-25017787)
chr5 (571-685)||(600769-600883)
chr5 (571-714)||(20946062-20946205)
chr5 (571-694)||(29866184-29866307)
chr5 (580-698)||(36177283-36177401)
chr5 (575-693)||(38972117-38972234)
chr5 (575-732)||(4857484-4857645)
chr5 (575-702)||(27642489-27642616)
chr5 (588-701)||(43060513-43060626)
chr5 (571-698)||(27798147-27798274)
chr5 (572-702)||(21912107-21912237)
chr5 (571-693)||(34877662-34877784)
chr5 (571-711)||(21574867-21575006)
chr5 (580-692)||(41521185-41521297)
chr5 (571-698)||(4738621-4738748)
chr5 (571-710)||(30348063-30348202)
chr5 (575-693)||(3247264-3247382)
chr5 (571-693)||(10523260-10523382)
chr5 (571-702)||(12895195-12895328)
chr5 (571-692)||(15898449-15898570)
chr5 (587-693)||(27587834-27587940)
chr5 (572-693)||(16969370-16969491)
chr5 (572-693)||(35568992-35569113)
chr5 (573-693)||(11980712-11980832)
chr5 (580-693)||(18729584-18729701)
chr5 (571-693)||(5845172-5845294)
chr5 (571-693)||(10934002-10934124)
chr5 (611-693)||(32067824-32067906)
chr5 (575-692)||(16496434-16496550)
chr5 (571-693)||(16101-16223)
chr5 (587-711)||(3631122-3631244)
chr5 (571-711)||(40979198-40979338)
chr5 (575-693)||(9375629-9375746)
chr5 (575-693)||(14044488-14044606)
chr5 (571-693)||(36347587-36347709)
chr5 (571-669)||(42644464-42644562)
chr5 (602-699)||(31642486-31642582)
chr5 (571-712)||(43453959-43454100)
chr5 (580-699)||(10656582-10656699)
chr5 (625-708)||(7510587-7510670)
chr5 (575-693)||(3529873-3529991)
chr5 (586-712)||(25690688-25690816)
chr5 (571-698)||(9946344-9946471)
chr5 (572-643)||(19089008-19089079)
chr5 (571-693)||(36750762-36750882)
chr5 (571-652)||(5151186-5151267)
chr5 (572-685)||(24781256-24781367)
chr5 (653-732)||(4378099-4378178)
chr5 (622-693)||(15967149-15967220)
chr5 (580-643)||(30317795-30317858)
chr5 (571-693)||(33583809-33583931)
chr5 (571-675)||(731938-732043)
chr5 (614-667)||(29874200-29874253)
chr5 (571-632)||(32401440-32401501)
chr5 (575-680)||(457780-457887)
chr5 (571-627)||(8717945-8718001)
chr5 (619-702)||(33862849-33862932)
chr5 (592-663)||(19281498-19281569)
chr5 (620-665)||(129634-129679)
chr5 (572-636)||(556054-556118)
chr5 (580-639)||(34676171-34676230)
chr5 (575-628)||(7736041-7736094)
chr5 (648-693)||(20976353-20976398)
chr5 (620-699)||(32402092-32402171)
[»] chr3 (81 HSPs)
chr3 (572-714)||(27047168-27047309)
chr3 (575-693)||(11388116-11388234)
chr3 (571-693)||(20945289-20945411)
chr3 (571-693)||(14645878-14646000)
chr3 (571-712)||(26517204-26517345)
chr3 (571-700)||(50363015-50363144)
chr3 (571-711)||(12077732-12077872)
chr3 (571-693)||(46048517-46048639)
chr3 (575-714)||(44083599-44083740)
chr3 (575-693)||(26043014-26043132)
chr3 (571-693)||(27638066-27638188)
chr3 (571-693)||(33287861-33287983)
chr3 (571-693)||(41727227-41727349)
chr3 (571-717)||(42891390-42891536)
chr3 (575-693)||(51263077-51263195)
chr3 (571-692)||(41825126-41825247)
chr3 (571-711)||(29676728-29676868)
chr3 (575-711)||(30476018-30476154)
chr3 (571-702)||(13084347-13084478)
chr3 (587-714)||(25750501-25750628)
chr3 (575-718)||(26121302-26121445)
chr3 (578-693)||(29645353-29645468)
chr3 (575-690)||(48901510-48901625)
chr3 (587-712)||(46435737-46435860)
chr3 (575-713)||(52325496-52325634)
chr3 (572-693)||(31819401-31819522)
chr3 (580-693)||(37729027-37729140)
chr3 (575-699)||(42010857-42010981)
chr3 (571-711)||(50524965-50525105)
chr3 (575-690)||(48903076-48903191)
chr3 (571-693)||(35055782-35055903)
chr3 (571-693)||(40645669-40645791)
chr3 (580-693)||(22659575-22659688)
chr3 (575-692)||(44338078-44338194)
chr3 (605-712)||(31650688-31650795)
chr3 (571-693)||(11344553-11344674)
chr3 (575-693)||(26998890-26999008)
chr3 (571-677)||(39617239-39617345)
chr3 (575-693)||(41739966-41740084)
chr3 (576-693)||(54425950-54426067)
chr3 (571-670)||(29611852-29611951)
chr3 (575-713)||(26243447-26243585)
chr3 (571-693)||(41308765-41308887)
chr3 (571-693)||(41543596-41543718)
chr3 (605-693)||(31531448-31531536)
chr3 (575-690)||(48309443-48309557)
chr3 (571-693)||(2421080-2421201)
chr3 (572-678)||(28477395-28477501)
chr3 (580-680)||(33411973-33412071)
chr3 (605-693)||(11393917-11394005)
chr3 (575-659)||(21932955-21933039)
chr3 (580-693)||(831358-831471)
chr3 (575-693)||(21864294-21864410)
chr3 (603-693)||(43187114-43187204)
chr3 (575-701)||(49000439-49000564)
chr3 (571-693)||(50092663-50092785)
chr3 (572-693)||(35145235-35145347)
chr3 (572-693)||(54555914-54556035)
chr3 (571-659)||(39931910-39931998)
chr3 (631-702)||(23157081-23157152)
chr3 (571-658)||(28229195-28229282)
chr3 (580-671)||(28243776-28243867)
chr3 (587-693)||(34055869-34055973)
chr3 (572-685)||(28228182-28228295)
chr3 (572-693)||(31474419-31474540)
chr3 (602-714)||(11140679-11140791)
chr3 (571-693)||(48581313-48581435)
chr3 (592-693)||(48213620-48213721)
chr3 (621-693)||(35765685-35765757)
chr3 (580-685)||(4979769-4979873)
chr3 (635-690)||(23068032-23068086)
chr3 (571-693)||(12236276-12236400)
chr3 (571-635)||(44647829-44647893)
chr3 (634-693)||(53717578-53717637)
chr3 (587-680)||(383614-383707)
chr3 (571-615)||(5504564-5504608)
chr3 (647-690)||(23071437-23071480)
chr3 (571-638)||(31826242-31826309)
chr3 (580-626)||(8818125-8818171)
chr3 (587-685)||(38668529-38668627)
chr3 (577-626)||(8325214-8325263)
[»] chr8 (68 HSPs)
chr8 (580-693)||(31746402-31746515)
chr8 (571-714)||(14577640-14577783)
chr8 (572-710)||(25888574-25888712)
chr8 (575-712)||(26878720-26878857)
chr8 (572-702)||(24962354-24962484)
chr8 (571-692)||(36309584-36309703)
chr8 (571-693)||(36437497-36437619)
chr8 (575-693)||(43980575-43980693)
chr8 (582-714)||(17933680-17933812)
chr8 (571-720)||(45203728-45203876)
chr8 (575-711)||(25185008-25185144)
chr8 (571-711)||(38770175-38770315)
chr8 (575-693)||(24512159-24512277)
chr8 (575-693)||(25198285-25198403)
chr8 (575-693)||(34882666-34882784)
chr8 (572-714)||(44255429-44255570)
chr8 (581-702)||(2562728-2562849)
chr8 (571-698)||(57176-57303)
chr8 (571-693)||(24276545-24276665)
chr8 (571-698)||(37956112-37956239)
chr8 (572-711)||(40790767-40790905)
chr8 (575-693)||(7172215-7172333)
chr8 (571-693)||(14846909-14847031)
chr8 (571-693)||(38761346-38761468)
chr8 (572-693)||(5191538-5191658)
chr8 (571-692)||(41086971-41087092)
chr8 (587-711)||(37141704-37141828)
chr8 (571-711)||(38202980-38203120)
chr8 (571-712)||(40517720-40517858)
chr8 (571-700)||(12998681-12998810)
chr8 (571-692)||(31252643-31252763)
chr8 (571-675)||(12762856-12762960)
chr8 (575-693)||(43191469-43191587)
chr8 (572-693)||(885458-885578)
chr8 (581-702)||(22590362-22590483)
chr8 (571-711)||(38773336-38773477)
chr8 (594-714)||(16644047-16644167)
chr8 (575-698)||(7772503-7772626)
chr8 (571-693)||(10396218-10396338)
chr8 (580-690)||(3006778-3006888)
chr8 (575-693)||(3113525-3113643)
chr8 (571-693)||(16002711-16002833)
chr8 (620-693)||(14522641-14522714)
chr8 (571-680)||(30262526-30262635)
chr8 (579-712)||(35794720-35794852)
chr8 (571-711)||(40337179-40337319)
chr8 (580-712)||(40602038-40602170)
chr8 (590-693)||(31673593-31673695)
chr8 (572-655)||(34157951-34158034)
chr8 (571-693)||(39543648-39543773)
chr8 (571-698)||(45185255-45185382)
chr8 (571-693)||(37600876-37600998)
chr8 (571-693)||(1177144-1177265)
chr8 (571-693)||(1769436-1769557)
chr8 (581-685)||(27569-27673)
chr8 (580-688)||(34869831-34869939)
chr8 (571-687)||(45183849-45183965)
chr8 (571-685)||(14739433-14739547)
chr8 (579-688)||(41541550-41541657)
chr8 (607-693)||(14906597-14906683)
chr8 (580-641)||(23399774-23399835)
chr8 (630-698)||(4273955-4274023)
chr8 (575-690)||(12894196-12894312)
chr8 (628-712)||(45283827-45283910)
chr8 (575-665)||(35709091-35709181)
chr8 (581-641)||(23280699-23280759)
chr8 (240-276)||(36933686-36933722)
chr8 (620-658)||(27194061-27194099)
[»] chr1 (85 HSPs)
chr1 (575-712)||(13723468-13723605)
chr1 (575-693)||(32152153-32152271)
chr1 (575-712)||(8984651-8984788)
chr1 (572-712)||(15512768-15512908)
chr1 (572-712)||(28948951-28949091)
chr1 (571-693)||(38680470-38680592)
chr1 (571-708)||(32144291-32144428)
chr1 (580-693)||(47754637-47754750)
chr1 (571-693)||(52141161-52141285)
chr1 (571-702)||(2342890-2343021)
chr1 (571-698)||(16582523-16582650)
chr1 (571-693)||(48721854-48721976)
chr1 (575-711)||(5085079-5085215)
chr1 (571-688)||(28723637-28723756)
chr1 (575-714)||(30898553-30898692)
chr1 (575-693)||(8877767-8877885)
chr1 (571-693)||(15179405-15179527)
chr1 (575-693)||(31305313-31305431)
chr1 (571-711)||(32047419-32047558)
chr1 (571-693)||(33231835-33231957)
chr1 (571-693)||(35365970-35366092)
chr1 (575-712)||(23982582-23982719)
chr1 (571-711)||(3143380-3143520)
chr1 (571-708)||(51390523-51390658)
chr1 (571-714)||(20564749-20564892)
chr1 (571-693)||(29140640-29140762)
chr1 (580-693)||(4813457-4813570)
chr1 (571-688)||(15911538-15911655)
chr1 (572-706)||(24414982-24415116)
chr1 (575-693)||(30336054-30336172)
chr1 (571-692)||(31807958-31808079)
chr1 (572-693)||(34696870-34696991)
chr1 (571-668)||(47070947-47071044)
chr1 (571-692)||(44652847-44652965)
chr1 (587-718)||(46495279-46495410)
chr1 (580-698)||(25269367-25269485)
chr1 (602-712)||(44335266-44335375)
chr1 (592-689)||(41737124-41737221)
chr1 (571-702)||(4817892-4818021)
chr1 (571-702)||(4829692-4829821)
chr1 (575-693)||(10842324-10842440)
chr1 (586-693)||(25258325-25258432)
chr1 (575-714)||(28679812-28679949)
chr1 (571-693)||(47643537-47643657)
chr1 (571-693)||(34102331-34102453)
chr1 (603-692)||(50692405-50692494)
chr1 (572-691)||(40261592-40261709)
chr1 (573-705)||(44395518-44395650)
chr1 (571-693)||(3831044-3831164)
chr1 (580-711)||(9675662-9675793)
chr1 (571-698)||(36084960-36085087)
chr1 (571-693)||(5322009-5322131)
chr1 (587-685)||(51996958-51997056)
chr1 (575-654)||(291625-291704)
chr1 (602-693)||(44163227-44163318)
chr1 (571-704)||(3143722-3143853)
chr1 (571-685)||(25063213-25063327)
chr1 (571-704)||(28334207-28334334)
chr1 (580-693)||(15457810-15457923)
chr1 (605-714)||(27531073-27531182)
chr1 (588-705)||(35001273-35001390)
chr1 (571-680)||(46591110-46591219)
chr1 (609-693)||(47133463-47133548)
chr1 (571-683)||(4081931-4082043)
chr1 (580-664)||(16395543-16395627)
chr1 (575-658)||(13145448-13145531)
chr1 (571-693)||(23393501-23393620)
chr1 (571-680)||(3072147-3072254)
chr1 (575-693)||(10160714-10160825)
chr1 (602-693)||(6282469-6282560)
chr1 (575-693)||(34331871-34331988)
chr1 (605-690)||(13352832-13352917)
chr1 (608-684)||(13698592-13698670)
chr1 (576-670)||(43414780-43414874)
chr1 (575-641)||(5852841-5852907)
chr1 (624-693)||(37733932-37734001)
chr1 (619-689)||(43189102-43189174)
chr1 (572-640)||(32715567-32715634)
chr1 (586-670)||(40205586-40205670)
chr1 (581-680)||(40702426-40702525)
chr1 (572-620)||(46732947-46732995)
chr1 (630-693)||(29302494-29302557)
chr1 (577-643)||(6023896-6023962)
chr1 (619-693)||(9684752-9684826)
chr1 (587-680)||(22786734-22786827)
[»] scaffold1091 (1 HSPs)
scaffold1091 (572-714)||(1901-2043)
[»] chr6 (39 HSPs)
chr6 (571-693)||(12514573-12514695)
chr6 (571-693)||(31945900-31946022)
chr6 (571-712)||(15981771-15981912)
chr6 (571-712)||(16327100-16327241)
chr6 (575-712)||(19838908-19839045)
chr6 (571-712)||(16350498-16350639)
chr6 (571-693)||(1763809-1763931)
chr6 (594-693)||(3729385-3729484)
chr6 (572-698)||(11302846-11302972)
chr6 (571-711)||(5895709-5895849)
chr6 (591-693)||(22410851-22410953)
chr6 (571-712)||(28238301-28238443)
chr6 (580-700)||(10669271-10669391)
chr6 (571-693)||(6791374-6791494)
chr6 (571-714)||(3887930-3888073)
chr6 (575-692)||(5084530-5084650)
chr6 (571-698)||(34513206-34513333)
chr6 (575-693)||(30465960-30466078)
chr6 (575-693)||(31536008-31536126)
chr6 (586-712)||(31780101-31780227)
chr6 (571-690)||(197439-197558)
chr6 (580-702)||(9428154-9428276)
chr6 (573-698)||(9461284-9461409)
chr6 (571-718)||(20522943-20523090)
chr6 (580-675)||(33607369-33607464)
chr6 (571-661)||(31152976-31153066)
chr6 (588-699)||(1514233-1514343)
chr6 (619-698)||(4250694-4250773)
chr6 (571-693)||(16186569-16186688)
chr6 (607-690)||(30248563-30248645)
chr6 (575-660)||(12514747-12514832)
chr6 (571-626)||(12503601-12503656)
chr6 (611-693)||(11081892-11081974)
chr6 (571-626)||(3729485-3729540)
chr6 (575-630)||(31487056-31487111)
chr6 (629-693)||(31487407-31487471)
chr6 (572-693)||(8644784-8644906)
chr6 (571-680)||(9941031-9941140)
chr6 (571-620)||(31039215-31039264)
[»] chr2 (89 HSPs)
chr2 (572-714)||(26512046-26512188)
chr2 (571-693)||(37355032-37355154)
chr2 (572-712)||(17663601-17663741)
chr2 (571-711)||(27297555-27297695)
chr2 (571-693)||(24774861-24774983)
chr2 (571-693)||(44424591-44424713)
chr2 (572-693)||(20361979-20362099)
chr2 (571-711)||(41865694-41865833)
chr2 (575-720)||(43709887-43710033)
chr2 (571-693)||(44421445-44421567)
chr2 (575-712)||(45214702-45214839)
chr2 (571-698)||(17250948-17251075)
chr2 (571-693)||(28264938-28265060)
chr2 (571-693)||(2131753-2131875)
chr2 (571-693)||(41665706-41665828)
chr2 (571-711)||(42250866-42251003)
chr2 (575-711)||(28733803-28733937)
chr2 (571-698)||(34329993-34330120)
chr2 (571-693)||(247656-247778)
chr2 (572-698)||(15851522-15851648)
chr2 (571-693)||(21012849-21012971)
chr2 (571-692)||(8065059-8065180)
chr2 (571-700)||(40346068-40346197)
chr2 (577-690)||(45150729-45150842)
chr2 (571-675)||(375332-375436)
chr2 (605-693)||(4398545-4398632)
chr2 (571-711)||(35178780-35178920)
chr2 (571-693)||(3645319-3645441)
chr2 (571-693)||(9718159-9718281)
chr2 (571-693)||(14527620-14527741)
chr2 (571-693)||(43650030-43650152)
chr2 (571-692)||(2048817-2048936)
chr2 (571-693)||(2917088-2917206)
chr2 (571-693)||(3237717-3237841)
chr2 (571-693)||(11459149-11459271)
chr2 (572-714)||(28190573-28190715)
chr2 (580-681)||(11071676-11071777)
chr2 (572-693)||(32677471-32677592)
chr2 (571-698)||(1246399-1246527)
chr2 (575-711)||(7278604-7278740)
chr2 (613-693)||(8384001-8384081)
chr2 (587-711)||(31644445-31644569)
chr2 (573-693)||(38449703-38449823)
chr2 (573-684)||(14420682-14420792)
chr2 (602-693)||(44274685-44274776)
chr2 (575-693)||(7257929-7258047)
chr2 (583-693)||(35241707-35241817)
chr2 (577-693)||(13477026-13477142)
chr2 (572-665)||(2521288-2521381)
chr2 (594-711)||(4033559-4033676)
chr2 (571-693)||(6275554-6275677)
chr2 (572-664)||(7255626-7255718)
chr2 (572-699)||(6597846-6597972)
chr2 (572-659)||(38982059-38982146)
chr2 (575-661)||(4758054-4758140)
chr2 (587-693)||(36174795-36174901)
chr2 (594-701)||(3337674-3337781)
chr2 (575-693)||(3326720-3326838)
chr2 (571-661)||(23464711-23464801)
chr2 (571-643)||(25731173-25731245)
chr2 (621-693)||(27749508-27749580)
chr2 (575-639)||(43119360-43119424)
chr2 (571-666)||(44101395-44101490)
chr2 (571-665)||(16808810-16808904)
chr2 (571-665)||(16848091-16848185)
chr2 (575-693)||(36175075-36175193)
chr2 (645-693)||(2395798-2395846)
chr2 (628-680)||(20426950-20427002)
chr2 (624-692)||(34042096-34042164)
chr2 (651-714)||(41327821-41327884)
chr2 (575-667)||(35453726-35453816)
chr2 (603-714)||(8667613-8667725)
chr2 (632-692)||(13534411-13534471)
chr2 (633-680)||(22590437-22590484)
chr2 (585-678)||(31583632-31583724)
chr2 (587-656)||(43638824-43638893)
chr2 (593-673)||(8393224-8393304)
chr2 (572-643)||(11121259-11121328)
chr2 (571-631)||(12498255-12498314)
chr2 (593-673)||(36846771-36846851)
chr2 (593-673)||(44462590-44462670)
chr2 (572-679)||(1604302-1604409)
chr2 (576-635)||(14286537-14286596)
chr2 (575-641)||(2654349-2654415)
chr2 (587-641)||(12417621-12417675)
chr2 (587-641)||(12429681-12429735)
chr2 (580-630)||(20427149-20427198)
chr2 (594-675)||(15578091-15578172)
chr2 (580-685)||(25731602-25731705)
[»] scaffold0012 (1 HSPs)
scaffold0012 (571-714)||(99804-99947)
[»] scaffold0038 (1 HSPs)
scaffold0038 (571-712)||(38463-38605)
[»] scaffold0013 (2 HSPs)
scaffold0013 (586-693)||(49132-49239)
scaffold0013 (577-663)||(61275-61361)
[»] scaffold0699 (1 HSPs)
scaffold0699 (571-690)||(7577-7695)
[»] scaffold0182 (2 HSPs)
scaffold0182 (587-683)||(18695-18791)
scaffold0182 (571-665)||(22084-22178)
[»] scaffold0166 (1 HSPs)
scaffold0166 (572-685)||(23639-23750)
[»] scaffold0176 (1 HSPs)
scaffold0176 (607-700)||(19521-19612)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 8e-88; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 571 - 763
Target Start/End: Complemental strand, 29585012 - 29584820
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29585012 cttgtcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 29584913  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacatacatggatgcatgaagtatttttgaatatgattaaccaaagagaaaagctaa 763  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||||||||||    
T  29584912 tttttcttaagaaatgtgaaaaatgcaaagggtgcttacatacatggacggatgaagtatttttgaacataattaaccaaagagaaaagctaa 29584820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 8 - 291
Target Start/End: Complemental strand, 29585578 - 29585294
Alignment:
Q  8 tttaggacatcaactttttataatttttgctaagaggtaattaaagatgttaaaagttaaatcgtacatgcattgacacatacaaaatgatttnnnnnnn 107  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||| |||||||| |||||           
T  29585578 tttaggacatcaactttttataatttttgttaagaggtaattaaagatgttaaaagttaaatcgt----gcattgacatatacaaaacgattttttaaaa 29585483  T
Q  108 nnnnnn-----caaagtcaatcgtattgggatgaatgaggtatagtaaataaaaagtgttttatggacattagacactcatttcgtcattcgcccgtaat 202  Q
               ||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||| |||    
T  29585482 aaaaaaaaaaacaaagtcaatcgttttgggatgaatgaagtatagtaaataaaaagtgtttgatggacattagacactaatttcttcattcacccgcaat 29585383  T
Q  203 ataaggttaatcacttcttcattcacccgtaacataaggttaatcacgtgcaaaaatatgtttaattcagttgagtggatggtgaattc 291  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29585382 ataaggttaatcacttcttcattcacccgcaacataaggttaattacgtgcaaaaatatgtttaattcagttgagtggatggtgaattc 29585294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 14602646 - 14602764
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| |||    
T  14602646 tcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttt 14602745  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  14602746 tcttaagaaatgtgaaaaa 14602764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 29585229 - 29585104
Alignment:
Q  356 tatgggtcatgttaactaaatcatttttatatttgatttattaatttgtgcactcgagggcacaatttatcattaccttaattatactc--tctccgtcc 453  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||||||  ||||| |||    
T  29585229 tatgggtcatgttaactaaatcatttttatatttgatttattaatttgggcactcgagatcacaagttatcattaccttaattatactctctctccatcc 29585130  T
Q  454 ctatatgatctaagcatcattttgac 479  Q
    ||||||||| ||||||||||||||||    
T  29585129 ctatatgatataagcatcattttgac 29585104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 12624813 - 12624692
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | ||||| ||||||||||||||||||||     
T  12624813 ttgtcttaaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagtcacattaattacactaacaac 12624714  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||    
T  12624713 ttttcttaagaaatgtgaaaaa 12624692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 25477343 - 25477221
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | || |||||||||||||||||| ||||    
T  25477343 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacataaaacagacacattaattacactgacaa 25477244  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  25477243 cttttcttaagaaatgtgaaaaa 25477221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 573 - 718
Target Start/End: Complemental strand, 31840212 - 31840069
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    |||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  || | | |||||||||||||||||||||    
T  31840212 tgtcttgaaatataaaaagacaaatttaatacacatacaaacaaatgacaatttggtaatattaacacac--aaaaaatacattaattacactaacaatt 31840115  T
Q  673 tttcttaagaaatgtgaaaaacacaaagggtgcttacatacatgga 718  Q
    ||||||||||||| ||||||| ||||| |||| ||| ||| |||||    
T  31840114 tttcttaagaaatttgaaaaatacaaaaggtgtttagatatatgga 31840069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 38136473 - 38136351
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| ||| |||||| |||| ||||||| | |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  38136473 cttgccttgaaatatgaaaaatcaaattaattacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaa 38136374  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  38136373 attttcttaagaaatgtgaaaaa 38136351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 56373331 - 56373453
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||||  |||||||| |||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||    
T  56373331 cttgtcttgaaatatgaaaaaacaaatttaatacacagacaaacaaatgacaatttggtaatattaacacacaaaataaacacattaattgcactaacaa 56373430  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||||    
T  56373431 tttttcttaagaaatgtgaaaaa 56373453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 571 - 714
Target Start/End: Original strand, 30153209 - 30153352
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||| ||| || ||||||||||||||| |||||| || |||||||||||||||||| ||||    
T  30153209 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggataatttggtaatattatcacacaaaacagacacattaattacactgacaa 30153308  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
     ||||||||||||||||||||||| ||||| | | |||||||||    
T  30153309 cttttcttaagaaatgtgaaaaacgcaaagagagtttacataca 30153352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 571 - 698
Target Start/End: Original strand, 39237576 - 39237703
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| || ||| |||||||||||||| ||||    
T  39237576 cttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagatacattaattacactgacaa 39237675  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     ||||||||| |||||||||||| ||||    
T  39237676 cttttcttaaaaaatgtgaaaaagacaa 39237703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 20262381 - 20262503
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  20262381 cttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaataacaatttcgtaatattaacacacaaaacagacacattaattacactgacaa 20262480  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  20262481 cttttcttaagaaatgtgaaaaa 20262503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 37175013 - 37175130
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| ||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||    
T  37175013 tcttgaaatatgaaaagtctaatttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattacac-aacaacttt 37175111  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  37175112 tcttaagaaatgtgaaaaa 37175130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 575 - 712
Target Start/End: Complemental strand, 20291454 - 20291317
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||| || ||| |||    
T  20291454 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttagtaatattaacccacaaaatagacacattaattacattaccaacttt 20291355  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    |||||||||||||||||||  ||||||| | |||||||    
T  20291354 tcttaagaaatgtgaaaaaagcaaagggagtttacata 20291317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 572 - 693
Target Start/End: Original strand, 22750830 - 22750951
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||||  ||||     
T  22750830 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaatacacaaaacagatacattaattacacagacaac 22750929  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||    
T  22750930 ttttcttaagaaatgtgaaaaa 22750951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 28116501 - 28116614
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  28116501 aaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttggcaatattaacacacaaaatagacatattaattacactaacaacttttctta 28116600  T
Q  680 agaaatgtgaaaaa 693  Q
    | ||||||||||||    
T  28116601 aaaaatgtgaaaaa 28116614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 41920029 - 41920147
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||| ||||||||| |||    
T  41920029 tcttgaaatatgaaaagtcaaatttatttcacatacaaacaaaagacaatttggtaatattaacacacaaaatagaaatattaattgcactaacaacttt 41920128  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  41920129 tcttaagaaatgtgaaaaa 41920147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 572 - 693
Target Start/End: Original strand, 26186743 - 26186864
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| | |  |||||| ||||||||||    
T  26186743 ttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaataaatatcttaattgcactaacaat 26186842  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    | || |||||||||||||||||    
T  26186843 tattattaagaaatgtgaaaaa 26186864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 51787888 - 51787767
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||||| | |||| |||||||||||||||| || |||||||||||||||||  ||||     
T  51787888 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgtctatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 51787789  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||    
T  51787788 ttttcttaagaaatgtgaaaaa 51787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 19654546 - 19654424
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||  ||||||| |||||||||||| |||||| ||||||||||||| |||||| | |||||||||||||||||||||||||     
T  19654546 cttgttttgaaatatgaaaagataaatttaatacacatacaaataaatgataatttggtaatatcaacacataaaatagacacattaattacactaacag 19654447  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||||    
T  19654446 tttttcttaagaaatgtgaaaaa 19654424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 588 - 702
Target Start/End: Complemental strand, 22651565 - 22651451
Alignment:
Q  588 aaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgt 687  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||||| ||| || ||||||||||||||||    
T  22651565 aaagtcaaatttaatacacatacaaacaaaagacaatttggtaatattaacatacaaaataaacacattaattacattaataaattttcttaagaaatgt 22651466  T
Q  688 gaaaaacacaaaggg 702  Q
    ||||||  |||||||    
T  22651465 gaaaaaagcaaaggg 22651451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 31486606 - 31486484
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| ||| ||||||||||| ||||||||| ||| |||| ||||||| || ||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  31486606 cttgccttgaaatataaaaaatcaaatttaatacgcatataaacaaaggataatttagtaatattaacacacaaaatagacacattaattgcactaacaa 31486507  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  31486506 cttttcttaagaaatgtgaaaaa 31486484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 33246484 - 33246606
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||  ||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  33246484 cttgtcttgaaatatgtaaagtcaaatttaatacacatacaaacaaaggataatttggtaatattaacacacaaaatagacattttaattacactaacaa 33246583  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||| ||||    
T  33246584 cttttcttaaaaaatgtggaaaa 33246606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 37625116 - 37625234
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||| |||||||||| ||||| |||||||||||||||| |||| |||||||||||| ||| |||| |||    
T  37625116 tcttgaaatatgaaaagtcaaatttaatacacatataaacaaatgataatttagtaatattaacacacaaaataaacacattaattatactgacaacttt 37625215  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  37625216 tcttaagaaatgtgaaaaa 37625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 52198715 - 52198837
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || ||||||||||||||||||| | |||||||||||| ||| || |||||||||||||||| |||||||| ||||| |||||||||||| ||||    
T  52198715 cttgttttgaaatataaaaagtcaaattcaatacacatacaaataaaagataatttggtaatattaatacacagaacagacatattaattacactgacaa 52198814  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  52198815 cttttcttaagaaatgtgaaaaa 52198837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 572 - 693
Target Start/End: Original strand, 20185644 - 20185765
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||| ||    ||||||||||||||||||||     
T  20185644 ttgtcttgaaatatgaaaagtcaaatttaatacaaatacaaacaaaaggcaatttggtaatattaacacacaaaacttgcacattaattacactaacaaa 20185743  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||    
T  20185744 ttttcttaagaaatgtgaaaaa 20185765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 48472482 - 48472623
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||||||||||||||||  |||||||||||| ||| || ||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  48472482 cttgtcttgaaatataaaaagtcaaatttcatacacatacaaagaaaggataatttcgtaatattaacacacaaaatagacacattaattacactgacaa 48472581  T
Q  671 tttttctt-aagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     ||||||| || |||||||||||| |||| || ||| |||||    
T  48472582 cttttcttaaaaaaatgtgaaaaagacaatggatgcctacat 48472623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 575 - 714
Target Start/End: Original strand, 5416860 - 5416997
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| ||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||  ||||| ||||| |||    
T  5416860 tcttgaaatattaaaagtcaaatttaatacacatacaaacaaaacacaatttggtaatattaacaaacaaaatagacacatta--tacacaaacaacttt 5416957  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    ||||||||||||||||| |  ||||| | |||||||||||    
T  5416958 tcttaagaaatgtgaaagaagcaaagagagcttacataca 5416997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 581 - 693
Target Start/End: Complemental strand, 5536605 - 5536493
Alignment:
Q  581 aatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    ||||| |||| ||||||||| ||||||||||||||||||| ||||| ||| ||||||||| || || |||||||||||||||||| ||||||||||||||    
T  5536605 aatatgaaaaatcaaatttaatacacatacaaacaaatgaaaatttcgtagtattaacacgcaaaacagacacattaattacactgacaatttttcttaa 5536506  T
Q  681 gaaatgtgaaaaa 693  Q
    |||||||||||||    
T  5536505 gaaatgtgaaaaa 5536493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 571 - 711
Target Start/End: Complemental strand, 24072885 - 24072745
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| ||||||| ||| |||||||||||||  ||||||||||||| | || |||||||||||||||| | ||||    
T  24072885 cttgtcttgaaatatgaaaagtcaaatttaatacacattcaagcaaatgacaatttcataatattaacacaaaaaacagacacattaattacattgacaa 24072786  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     |||||||||||||||| ||||| |||| |||||| |||||    
T  24072785 cttttcttaagaaatgtaaaaaagacaatgggtgcctacat 24072745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 575 - 690
Target Start/End: Complemental strand, 34543816 - 34543701
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||| ||| |||||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||  |||| |||    
T  34543816 tcttgaaatatgaaaagtcaaaattaatacacatacaaacaaaggattatttggtaatattaacacacaaaatagacacattaattacacggacaacttt 34543717  T
Q  675 tcttaagaaatgtgaa 690  Q
    ||||||||||||||||    
T  34543716 tcttaagaaatgtgaa 34543701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 46729423 - 46729297
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| ||| |||||| |||||||||||||| |||||||||||||| | |||||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  46729423 cttgccttgaaatatgaaaagtcaaatttaatacacatacaaacataggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaa 46729324  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     ||||||||| |||||||||||| ||||    
T  46729323 cttttcttaa-aaatgtgaaaaagacaa 46729297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 13096529 - 13096650
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||||| |||||| || |||  | |||||| |||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  13096529 cttgtcttaaaatatgaaaagttaatttttatgcacatagaaacaaatgacaatttggtaatattaacacacaacacagacacattaattacactaacaa 13096628  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  13096629 cttttcttaa-aaatgtgaaaaa 13096650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 50782892 - 50782774
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||||||||| | ||| ||| |||||||||||||||| |||||||| |||||||||| ||||| || |||||||||||||||||| |||| |||    
T  50782892 tcttgaaatataaaaaattaaagttaatacacatacaaacaaaggacaatttcgtaatattaagacacaaaacagacacattaattacactgacaacttt 50782793  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  50782792 tcttaagaaatgtgaaaaa 50782774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 571 - 711
Target Start/End: Complemental strand, 16070549 - 16070409
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| |||| ||| ||||||| || |||||||||||||||||||||| || |||||||||||||||||| |||     
T  16070549 cttgtattgaaatatgaaaagtcaaatttaatacatatataaacaaaagataatttggtaatattaacacacaaaacagacacattaattacactgacag 16070450  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
      ||||||||||||||||||||| ||||  ||||| |||||    
T  16070449 catttcttaagaaatgtgaaaaagacaataggtgcctacat 16070409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 54438628 - 54438501
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| |||||||||||| ||| || ||||| |||||||||||||||| || |||||| ||||||| ||  ||||    
T  54438628 cttgttttgaaatatgaaaagtcaaatttaatacacatacaaataaaggataatttcgtaatattaacacacaaaacagacactttaattatacggacaa 54438529  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
    ||||||||||||||||||||||| ||||    
T  54438528 tttttcttaagaaatgtgaaaaagacaa 54438501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 41945760 - 41945881
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||| ||||||||||| |||||||| ||||||||| |||| | || | |||||||||||||||| ||||    
T  41945760 cttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaaggacaatttcgtaatattatcacataaaaca-acacattaattacactgacaa 41945858  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    |||||||||| ||||||||||||    
T  41945859 tttttcttaaaaaatgtgaaaaa 41945881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 608 - 693
Target Start/End: Complemental strand, 3094263 - 3094178
Alignment:
Q  608 tacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||| |||||    
T  3094263 tacaaacaaatgacaatttggtaatattaacacacaaaatagacacattaattactttaacaacttttcttaagaaatgtcaaaaa 3094178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 52226137 - 52226010
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||| ||||||| ||||||||| ||||||||||| | | || |||||||||||||| ||| ||||    
T  52226137 cttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaatttgataatattaacatataaaacagacacattaattatactgacaa 52226038  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
      |||||||| |||||||||||| ||||    
T  52226037 catttcttaaaaaatgtgaaaaagacaa 52226010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 5448776 - 5448658
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| || |||||||||||||| | | | ||  ||    
T  5448776 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttcgtaatattaacacacaaaacagacacattaattatattgataacatt 5448677  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  5448676 tcttaagaaatgtgaaaaa 5448658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 5933004 - 5932883
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||  ||||| | ||||||| |||||||| ||||||||||||||||| ||||||||||||||| || | |||||||||||||||| ||||    
T  5933004 cttgtcttgaaattaaaaaaattaaatttaatacacataaaaacaaatgacaatttgataatattaacacacaaaacaaacacattaattacactgacaa 5932905  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  5932904 cttttcttaa-aaatgtgaaaaa 5932883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 692
Target Start/End: Original strand, 39197021 - 39197143
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaa-tagacacattaattacactaaca 669  Q
    ||||| ||||||| | |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||  |||||||||||| | | | |||    
T  39197021 cttgttttaaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaacaagacacattaatcatagtgaca 39197120  T
Q  670 atttttcttaagaaatgtgaaaa 692  Q
    |||||||||||||||||| ||||    
T  39197121 atttttcttaagaaatgtaaaaa 39197143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 665
Target Start/End: Complemental strand, 43800926 - 43800832
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacact 665  Q
    |||||||| |||||| |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| || |||||| |||||||||||    
T  43800926 cttgtcttgaaatatgaaaagtcaaattaaatacacatacaaacaaaggacaatttggtaatattaacacacaaaacagacaccttaattacact 43800832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 712
Target Start/End: Original strand, 45628062 - 45628203
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||| ||| ||| | ||||||||||||||||| ||||| || |||||||| ||||||||||||||    
T  45628062 cttgtcttgaaatatgaaaagtcaaatttaatacacata-aaataaagggcaatttggtaatattaatacacaaaacagacacatcaattacactaacaa 45628160  T
Q  671 tttttctt-aagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     ||||||| || |||||||||||| | ||||||  ||||||||    
T  45628161 cttttcttaaaaaaatgtgaaaaatataaaggggacttacata 45628203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 571 - 712
Target Start/End: Complemental strand, 26203248 - 26203107
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||  |||||||||||||| || ||||||||| ||| |||||||| |||||||||||||| | |||| | |||||||||||| ||||||    
T  26203248 cttgtcttgaaatacgaaaagtcaaatttaatatacatacaaagaaaagacaattttgtaatattaacacataaaatatatacattaattacagtaacaa 26203149  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     ||||||||| ||||||| ||||   |||||| |||||||||    
T  26203148 cttttcttaataaatgtggaaaaagtaaagggggcttacata 26203107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 7002297 - 7002178
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| |||||||||  ||||||||||||||| || |||||||||||||||||||| | |||| | ||||||||| || ||||||||||    
T  7002297 tcttgaaatatgaaaaatcaaatttaacacacatacaaacaaaggataatttggtaatattaacacataaaatataaacattaattgcattaacaatttt 7002198  T
Q  675 tctt-aagaaatgtgaaaaa 693  Q
    |||| |||||||||||||||    
T  7002197 tcttaaagaaatgtgaaaaa 7002178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 39414348 - 39414232
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| ||||||||||||||  ||||||||||||||| || |||||| ||||||||||||||| |||||||| ||||||| || || ||| |||    
T  39414348 tcttgaaatatgaaaagtcaaattta--acacatacaaacaaaagataatttgataatattaacacacaaaatagacatattaattgcattatcaacttt 39414251  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    ||||||||||| |||||||    
T  39414250 tcttaagaaatatgaaaaa 39414232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 43509198 - 43509079
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||| | |||||| ||||||| |||||||||||||||| ||||||||| ||||||||||||||| || | |||||||||||||||  ||||     
T  43509198 ttgtcttgaaatttgaaaagttaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaaca-acacattaattacac-gacaac 43509101  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
     |||||||||||||||||||||    
T  43509100 gtttcttaagaaatgtgaaaaa 43509079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 20116568 - 20116448
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||  ||||||||||||||| || ||   ||||||||||| | ||||    
T  20116568 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttcctaatattaacacacaaaacag--gcattaattacattgacaa 20116471  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| |||| |||||||    
T  20116470 cttttcttaataaatatgaaaaa 20116448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 582 - 692
Target Start/End: Original strand, 10541255 - 10541365
Alignment:
Q  582 atataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaag 681  Q
    ||||||||||||||||||| |||||||  ||||||| || |||||||||||||||| ||||| |||| | ||||||||| || |||||| ||||||| ||    
T  10541255 atataaaaagtcaaatttaatacacatttaaacaaaggataatttggtaatattaatacacaaaatatatacattaattgcattaacaacttttctttag 10541354  T
Q  682 aaatgtgaaaa 692  Q
    |||||| ||||    
T  10541355 aaatgtaaaaa 10541365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 575 - 677
Target Start/End: Original strand, 31937383 - 31937485
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||  || ||||||||||||||||||||||  ||||||||||||||| || |||||||||||||||| | |||| |||    
T  31937383 tcttgaaatatgaaaagtcaaattttatatacatacaaacaaatgacaatttaataatattaacacacaaaacagacacattaattacagtgacaacttt 31937482  T
Q  675 tct 677  Q
    |||    
T  31937483 tct 31937485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 10602206 - 10602316
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| ||||||    |||||| |||||||| |||||||||||||||| |||||||| ||||||||||||| ||| ||||||||    
T  10602206 aaatatgaaaagtcaaatttaatacaca----aacaaaagacaatttagtaatattaacacacaaaatagacaaattaattacactaccaacttttctta 10602301  T
Q  680 aga-aatgtgaaaaa 693  Q
    | | |||||||||||    
T  10602302 aaagaatgtgaaaaa 10602316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 702
Target Start/End: Original strand, 3684198 - 3684306
Alignment:
Q  594 aaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||| || ||||| |||||||||| |||||  ||||||||| ||||| ||||||||||||||||||||  ||||| |||||||| ||||||||||||    
T  3684198 aaatttaatatacatataaacaaatgataatttaataatattaatacacaaaatagacacattaattacaccgacaatctttcttaataaatgtgaaaaa 3684297  T
Q  694 cacaaaggg 702  Q
      |||||||    
T  3684298 agcaaaggg 3684306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 580 - 687
Target Start/End: Complemental strand, 20792036 - 20791929
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||| ||||||||| |||| ||||||| ||| || ||||  |||||||||||||||| |||||||| ||||||| ||||| ||| ||||||||    
T  20792036 aaatatgaaaactcaaatttaatacatatacaaataaaagataattatgtaatattaacacacaaaatagacatattaattgcactaccaacttttctta 20791937  T
Q  680 agaaatgt 687  Q
    ||||||||    
T  20791936 agaaatgt 20791929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 571 - 650
Target Start/End: Original strand, 40411330 - 40411409
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaataga 650  Q
    |||||||| |||||| |||||| ||||||| |||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  40411330 cttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaatgacaatttcataatattaacacacaaaataga 40411409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 571 - 664
Target Start/End: Complemental strand, 5168097 - 5168004
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacac 664  Q
    ||||| || |||||| |||| | ||||||| ||||||||||||||||||||||||| ||||||||||| |||| || ||||| |||||||||||    
T  5168097 cttgtattgaaatatgaaaaattaaatttaatacacatacaaacaaatgacaatttagtaatattaacgcacaaaacagacatattaattacac 5168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 575 - 692
Target Start/End: Original strand, 52552502 - 52552619
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||  ||||| |||||||||| || |||||||||||||||||||| | |  ||||| ||| |||||||| |||| |||    
T  52552502 tcttgaaatatgaaaagtcaaattttatacacgtacaaacaaaggataatttggtaatattaacacataaagcagacaaatttattacactgacaacttt 52552601  T
Q  675 tcttaagaaatgtgaaaa 692  Q
    |||||| ||| |||||||    
T  52552602 tcttaaaaaacgtgaaaa 52552619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 588 - 657
Target Start/End: Original strand, 52768903 - 52768972
Alignment:
Q  588 aaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacatta 657  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||| |||||||||||||    
T  52768903 aaagtcaaatttaatacacatacaaataaatgacaattttgtaatattcacacacaaaatagacacatta 52768972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 54701281 - 54701396
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||| ||||||| |||||||||||| |||||||||||||   ||| ||||||||  || | ||| |||||||||||| |||| |||    
T  54701281 tcttgaaatatgaaaagttaaatttaatacacatacaaataaatgacaatttg---ataataacacactaaacaaacatattaattacactgacaacttt 54701377  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||| ||||||||||||    
T  54701378 tcttaaaaaatgtgaaaaa 54701396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 580 - 670
Target Start/End: Complemental strand, 32236940 - 32236850
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||| |||||||||||||| |||||||| |||||||  | |||||| ||||||||||||||| || ||||| |||||||||||| ||||    
T  32236940 aaatatgaaaagtcaaatttaatacacatataaacaaagaataatttgataatattaacacacaaaacagacatattaattacactgacaa 32236850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 20293865 - 20293739
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacatta----attacacta 666  Q
    ||||| || |||||| || ||||||||||| |||| ||||||||||| |||||||  ||||||||| || | | |||| ||||||||    ||||||||     
T  20293865 cttgtattgaaatatgaatagtcaaatttaatacaaatacaaacaaaagacaattcagtaatattagcataaaaaatatacacattaattaattacactg 20293766  T
Q  667 acaatttttcttaagaaatgtgaaaaa 693  Q
    |||| ||||||||||||||||||||||    
T  20293765 acaacttttcttaagaaatgtgaaaaa 20293739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 20016639 - 20016521
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||  ||| ||||||||| ||||  |||||||||| || |||||||||||||||||| ||| |||||  ||||||||| ||||||| |    
T  20016639 cttgtcttgaaatatgtaaactcaaatttaataca--tacaaacaaaggaaaatttggtaatattaacatacaaaatag--acattaattgcactaacta 20016544  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      |||||||| ||||||||||||    
T  20016543 cctttcttaaaaaatgtgaaaaa 20016521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 637
Target Start/End: Complemental strand, 21121085 - 21121019
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaa 637  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||||| |||| |||| |||||||||    
T  21121085 cttgtcttaaaatataaaaagttaaatttaatacgcatacaaacaaaagacagtttgataatattaa 21121019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 575 - 660
Target Start/End: Complemental strand, 32107959 - 32107874
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaatt 660  Q
    ||||||||||| |||||||||||||| |||| ||||||| ||| ||||||||| ||||||||| ||||| || | | |||||||||    
T  32107959 tcttaaaatatgaaaagtcaaatttaatacatatacaaataaaagacaatttgataatattaatacacaaaacatatacattaatt 32107874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 51918643 - 51918760
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| ||    ||||||||||  | |||||||||||| ||||||||| |||||||||||||||| || |||       
T  51918643 cttgtcttgaaatatgaaaagtcaaatttaata----tacaaacaaagaataatttggtaatactaacacacaaaatagacacattaattgcattaa-tt 51918737  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    ||||| |||| ||||||||||||    
T  51918738 ttttttttaataaatgtgaaaaa 51918760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 571 - 659
Target Start/End: Complemental strand, 41459705 - 41459617
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaat 659  Q
    |||||| | |||||| |||||||||||||| |||||||| ||| ||| |||||||| ||||||||||| |||| | | |||||||||||    
T  41459705 cttgtcatgaaatatgaaaagtcaaatttaatacacatataaataaaagacaatttagtaatattaacgcacaaactcgacacattaat 41459617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 580 - 664
Target Start/End: Original strand, 44812603 - 44812687
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacac 664  Q
    |||||| |||||||||||||| |||||| ||||| |||||||||||| |||||||||||| | | || | | |||||||||||||    
T  44812603 aaatatgaaaagtcaaatttaatacacacacaaataaatgacaattttgtaatattaacatataaaacaaatacattaattacac 44812687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 587 - 685
Target Start/End: Original strand, 18683538 - 18683634
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaat 685  Q
    |||||||||||||| |||| |  |||||||| ||||| |||||||||||||| |||| |||| |||||||||||  | |||||| |||| |||||||||    
T  18683538 aaaagtcaaatttaatacaaa--caaacaaaggacaagttggtaatattaacgcacaaaataaacacattaattgtattaacaactttttttaagaaat 18683634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 620 - 699
Target Start/End: Complemental strand, 23928401 - 23928323
Alignment:
Q  620 acaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaa 699  Q
    ||||||| ||||||||||||| || |||| ||||||||||| |||||||  ||||| |||| ||||||||||||||||||    
T  23928401 acaatttagtaatattaacacgcaaaataaacacattaattgcactaacttttttttttaa-aaatgtgaaaaacacaaa 23928323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 575 - 626
Target Start/End: Complemental strand, 31917491 - 31917440
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaattt 626  Q
    |||||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  31917491 tcttaaaatataaaaagtcaaatttaatacacatacaaacaaaacacaattt 31917440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 622 - 693
Target Start/End: Original strand, 45079849 - 45079920
Alignment:
Q  622 aatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||| ||||||||||||||| |||||| |  |||||| ||||||| | ||||||||||||||||||||||    
T  45079849 aatttgctaatattaacacacaaaatagatatgttaattgcactaactacttttcttaagaaatgtgaaaaa 45079920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 633
Target Start/End: Complemental strand, 30866774 - 30866712
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaata 633  Q
    |||||||| ||| ||||||||||||| ||| ||||||||||||||||| |||||||| |||||    
T  30866774 cttgtcttgaaaaataaaaagtcaaaattaatacacatacaaacaaataacaatttgttaata 30866712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 573 - 690
Target Start/End: Complemental strand, 31294272 - 31294155
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    ||||||| ||||| |||||||||||  | | ||||||||||||||| ||||| | |||| ||| ||||||| | ||||||||| ||  |||||| ||| |    
T  31294272 tgtcttacaatatgaaaagtcaaatcaaattcacatacaaacaaataacaatgtagtaaaatttacacacaaactagacacatgaacaacactatcaact 31294173  T
Q  673 tttcttaagaaatgtgaa 690  Q
    |||||||| || ||||||    
T  31294172 tttcttaataagtgtgaa 31294155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 693
Target Start/End: Complemental strand, 52977665 - 52977553
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||||| |||||||||| | |||||||||||| |||  | | |||  ||||||||||||| | ||||||||||| |||| || |||||| |||| |||    
T  52977665 aaatataagaagtcaaattaagtacacatacaaataaaaaatagtttaataatattaacacataaaatagacacatgaattgcattaacaacttttttta 52977566  T
Q  680 agaaatgtgaaaaa 693  Q
    || |||||||||||    
T  52977565 ag-aatgtgaaaaa 52977553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 683
Target Start/End: Complemental strand, 54359801 - 54359690
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaa---tattaacacacagaatagacacattaattacactaa 667  Q
    |||||||| |||||| |||||| ||||||| |||||||||||| |    ||||||| ||||   |||||||||| | || |||||||||||||| ||| |    
T  54359801 cttgtcttgaaatatgaaaagttaaatttaatacacatacaaaga----acaatttcgtaatattattaacacataaaacagacacattaattatactga 54359706  T
Q  668 caatttttcttaagaa 683  Q
    ||| ||||||||||||    
T  54359705 caacttttcttaagaa 54359690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 578 - 641
Target Start/End: Original strand, 36513304 - 36513367
Alignment:
Q  578 taaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacaca 641  Q
    |||||||| |||| ||||||||| |||| |||||||||||  |||||||| |||||||||||||    
T  36513304 taaaatatgaaaaatcaaatttaatacatatacaaacaaaaaacaatttgataatattaacaca 36513367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 693
Target Start/End: Complemental strand, 30049481 - 30049427
Alignment:
Q  639 acacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||| |||||||||||||||||||||||  | ||||||||| ||||||||||||    
T  30049481 acacaaaatagacacattaattacactaatcacttttcttaaaaaatgtgaaaaa 30049427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 587 - 661
Target Start/End: Complemental strand, 52676122 - 52676048
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaatta 661  Q
    |||||||||||||| |||||||| ||| ||| ||||||||  ||||||||| ||| | |||||||| ||||||||    
T  52676122 aaaagtcaaatttaatacacatataaataaaggacaatttaataatattaatacaaaaaatagacatattaatta 52676048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 648
Target Start/End: Complemental strand, 21171838 - 21171765
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaata 648  Q
    |||| ||||||  ||||||||||||| |||||||||||| ||| || |||||| |||||||||| |||| ||||    
T  21171838 tcttgaaatatgtaaagtcaaatttaatacacatacaaataaaagataatttgataatattaacccacaaaata 21171765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 639
Target Start/End: Complemental strand, 31552246 - 31552190
Alignment:
Q  582 atataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaaca 639  Q
    ||||||||| ||||||||| |||||||| ||| |||||||||||| ||||||||||||    
T  31552246 atataaaaa-tcaaatttaatacacatataaataaatgacaatttagtaatattaaca 31552190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 631
Target Start/End: Complemental strand, 20540088 - 20540029
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaa 631  Q
    ||||| ||||||||| ||| |||||||||| ||||||||||||||||  ||||||||||||    
T  20540088 cttgtattaaaatatgaaa-gtcaaatttaatacacatacaaacaaagaacaatttggtaa 20540029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 626
Target Start/End: Original strand, 26170258 - 26170309
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaattt 626  Q
    |||| |||||| |||||||||||||| |||| ||||||| ||||||||||||    
T  26170258 tcttgaaatatgaaaagtcaaatttaatacatatacaaataaatgacaattt 26170309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 712
Target Start/End: Complemental strand, 32866542 - 32866481
Alignment:
Q  651 cacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    ||||||||||||||  |||| |||||||||||||||||| |||  |||||||  ||||||||    
T  32866542 cacattaattacaccgacaacttttcttaagaaatgtgagaaatgcaaaggggacttacata 32866481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 648
Target Start/End: Complemental strand, 34643508 - 34643436
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaata 648  Q
    |||| |||||| |||| | ||||||| |||||||||||||||| ||||||||  ||||||||||| ||| ||||    
T  34643508 tcttgaaatatgaaaaattaaatttaatacacatacaaacaaa-gacaatttattaatattaacatacaaaata 34643436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 626
Target Start/End: Original strand, 53484437 - 53484486
Alignment:
Q  577 ttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaattt 626  Q
    |||||||||||||| |||||| || |||||||| |||| |||||||||||    
T  53484437 ttaaaatataaaaaatcaaatataatacacataaaaacgaatgacaattt 53484486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 214732 - 214614
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| |||    
T  214732 tcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttt 214633  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  214632 tcttaagaaatgtgaaaaa 214614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 5e-46; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 572 - 718
Target Start/End: Complemental strand, 48193732 - 48193586
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| |||  ||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48193732 ttgtcttgaaatatgaaaagtcaaatttaatactaatataaacaaaggataatttggtaatattaacacacaaaatagacacattaattacactaacaat 48193633  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacatacatgga 718  Q
    ||||||||| ||||||||||||  ||||||| |||||||||||||||    
T  48193632 ttttcttaaaaaatgtgaaaaatgcaaagggggcttacatacatgga 48193586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 6376120 - 6376242
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||| | |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| || ||| |||||||||||||||||||    
T  6376120 cttgtcttaaaatttgaaaagttaaatttaatacacatacaaacaaatgacaatttagtaatattaacacacaaaacagagacattaattacactaacaa 6376219  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||||    
T  6376220 tttttcttaagaaatgtgaaaaa 6376242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 31373689 - 31373807
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| | |||||||||||    
T  31373689 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaatagacacattaattgccctaacaatttt 31373788  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  31373789 tcttaagaaatgtgaaaaa 31373807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 571 - 700
Target Start/End: Complemental strand, 25750486 - 25750357
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  25750486 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaacagacacattaattacactgacaa 25750387  T
Q  671 tttttcttaagaaatgtgaaaaacacaaag 700  Q
     |||| ||||||||||||||||| ||||||    
T  25750386 ctttttttaagaaatgtgaaaaatacaaag 25750357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 36116439 - 36116312
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | || |||||||||||||||||  ||||    
T  36116439 cttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacataaaacagacacattaattacaccgacaa 36116340  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
      ||||||||||||||||||||| ||||    
T  36116339 catttcttaagaaatgtgaaaaagacaa 36116312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 571 - 704
Target Start/End: Complemental strand, 37673855 - 37673722
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| ||||||||  ||||||||||||||| || |||||||||||||||||| ||||    
T  37673855 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttcataatattaacacacaaaacagacacattaattacactcacaa 37673756  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtg 704  Q
      ||||||||||||||||||||| |||| |||||    
T  37673755 catttcttaagaaatgtgaaaaagacaatgggtg 37673722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 1324826 - 1324704
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||| | ||    
T  1324826 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataagattaacacacaaaacagacacattaattacactgataa 1324727  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      |||||||||||||||||||||    
T  1324726 catttcttaagaaatgtgaaaaa 1324704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 4089487 - 4089609
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||| ||||||||||| || ||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  4089487 cttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaaagataatttcgtaatattaacacacaaaacagacacattaattacactgacaa 4089586  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  4089587 cttttcttaagaaatgtgaaaaa 4089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 21388356 - 21388238
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    ||||||||| | |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| || |||||||||||||||||  |||| |||    
T  21388356 tcttaaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaacagacacattaattacaccgacaaattt 21388257  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  21388256 tcttaagaaatgtgaaaaa 21388238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 587 - 712
Target Start/End: Complemental strand, 20123552 - 20123427
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||| ||||||||| |||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||| |||| |||||||||||||||    
T  20123552 aaaattcaaatttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatg 20123453  T
Q  687 tgaaaaacacaaagggtgcttacata 712  Q
    |||||||  ||||||| | |||||||    
T  20123452 tgaaaaaagcaaagggagtttacata 20123427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 21801052 - 21801165
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| || ||||||||||||||||   |||| ||||||||    
T  21801052 aaatataaaaagtcaaatttaatacacatacaaataaatgacaatttagtaatattaacacacaaaacagacacattaattacatcgacaacttttctta 21801151  T
Q  680 agaaatgtgaaaaa 693  Q
    ||||||||||||||    
T  21801152 agaaatgtgaaaaa 21801165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 26632963 - 26632842
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||| ||||||||||||||| | |||||||||||||| || ||||| |||||||||||||| | |||||||||||||| ||||||||||||    
T  26632963 ttgtcttgaaatacaaaaagtcaaatttaatgcacatacaaacaaaagataatttagtaatattaacacataaaatagacacattaactacactaacaat 26632864  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||| ||||||||||||    
T  26632863 ttttcttaaaaaatgtgaaaaa 26632842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 575 - 708
Target Start/End: Original strand, 46783832 - 46783965
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||| |  ||||||||||||||| |||||| || |||    
T  46783832 tcttgaaatatgaaaagtcaaatttaatacacatacgaacaaaagacaatttggtaatattaacacataagatagacacattaatttcactaataacttt 46783931  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgctta 708  Q
    ||||||||||||||||||| | ||| ||||||||    
T  46783932 tcttaagaaatgtgaaaaatataaaaggtgctta 46783965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 571 - 714
Target Start/End: Original strand, 21809634 - 21809777
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | || ||||||||||||||||   ||||    
T  21809634 cttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacaaaaaacagacacattaattacatcgacaa 21809733  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
     |||||||||||||||||||||| ||||| ||  ||||||||||    
T  21809734 cttttcttaagaaatgtgaaaaatacaaaagggacttacataca 21809777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 48610123 - 48610245
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||| ||||| || |||||||||||||||| | ||||    
T  48610123 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttcgtaatattaatacacaaaacagacacattaattacagtgacaa 48610222  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  48610223 cttttcttaaaaaatgtgaaaaa 48610245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 10685202 - 10685081
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | || |||||||||||||||||| | ||     
T  10685202 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacactgataac 10685103  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||| |||||||    
T  10685102 ttttcttaagaaatatgaaaaa 10685081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 37491615 - 37491728
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| |||| ||||||||||| || |||||||||||||||||| | | |||||||||||||||| ||||||||| ||||||||    
T  37491615 aaatatgaaaagtcaaatttaatacatatacaaacaaaggataatttggtaatattaacatataaaatagacacattaattgcactaacaacttttctta 37491714  T
Q  680 agaaatgtgaaaaa 693  Q
    ||||||||||||||    
T  37491715 agaaatgtgaaaaa 37491728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 602 - 711
Target Start/End: Original strand, 40211295 - 40211404
Alignment:
Q  602 tacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagg 701  Q
    |||||||||||| |||||||||||| |||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||| ||||||| |||| ||    
T  40211295 tacacatacaaataaatgacaatttcgtaatattaacacacaaaacagacacattaattacacaaacaatttttcttaaaaaatatgaaaaagacaatgg 40211394  T
Q  702 gtgcttacat 711  Q
    ||||||||||    
T  40211395 gtgcttacat 40211404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 571 - 699
Target Start/End: Complemental strand, 27213605 - 27213477
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||| ||||| |||| || ||||||||||||| |||||||| |||||||||||||||| |||||||| |||| || |||||||||    
T  27213605 cttgtcttgaaatatgaaatgtcaattttaatagacatacaaacaaaggacaatttagtaatattaacacacaaaatagacatattagttgcactaacaa 27213506  T
Q  671 tttttcttaagaaatgtgaaaaacacaaa 699  Q
     |||||||||||||||||||||| |||||    
T  27213505 cttttcttaagaaatgtgaaaaatacaaa 27213477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 572 - 702
Target Start/End: Original strand, 5334383 - 5334514
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||| | |||||||||||||| ||||||||||||||||||| | |||||||||||||||| ||| || | ||||||||||||||||||||||    
T  5334383 ttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaatgatagtttggtaatattaacatacaaaacaaacacattaattacactaacaat 5334482  T
Q  672 ttttctt-aagaaatgtgaaaaacacaaaggg 702  Q
    ||||||| || |||||| ||||| ||||||||    
T  5334483 ttttcttaaaaaaatgtaaaaaatacaaaggg 5334514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 573 - 711
Target Start/End: Complemental strand, 48767681 - 48767542
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaa-caaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    |||||| |||||| |||||||||||||| |||||||||||| |||| |||||||| |||||||||||||||| || |||||||||||||||||| ||||     
T  48767681 tgtcttgaaatatgaaaagtcaaatttaatacacatacaaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaac 48767582  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     ||| |||||||||||||||||  ||| |||||| |||||    
T  48767581 gttttttaagaaatgtgaaaaaagcaatgggtgcctacat 48767542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 587 - 693
Target Start/End: Original strand, 2276580 - 2276686
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||| |||||| |||| |||| ||||||||||    
T  2276580 aaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaacagacaaattaactacactgacaacttttgttaagaaatg 2276679  T
Q  687 tgaaaaa 693  Q
    |||||||    
T  2276680 tgaaaaa 2276686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 19236054 - 19236176
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| ||||||||||||||||  ||||| |||||||||||||| ||| ||  ||||||||||||||||||||||    
T  19236054 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaagaacaatatggtaatattaacatacaaaaccgacacattaattacactaacaa 19236153  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||||||| |||||||||||||    
T  19236154 cttttcttacgaaatgtgaaaaa 19236176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 40263825 - 40263707
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||  || || |||||||||||||||||  |||| |||    
T  40263825 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacaatcaaaacagacacattaattacaccgacaacttt 40263726  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||| ||||||||||||    
T  40263725 tcttaaaaaatgtgaaaaa 40263707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 711
Target Start/End: Complemental strand, 35128502 - 35128364
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||| ||||||||  ||||||||||||||| || ||||| |||||||||||| ||||    
T  35128502 cttgtcttgaaatatgaaaattcaaatttaatacacatacaaacaaaggacaatttcataatattaacacacaaaacagacatattaattacactgacaa 35128403  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     ||||||||  |||||||||||| ||||  |||||||||||    
T  35128402 cttttctta--aaatgtgaaaaagacaataggtgcttacat 35128364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 40741066 - 40740946
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacata--caaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    |||| |||||| ||||||||||||||  |||||||  |||| |||||| |||||||||||||||||||||| |||||||| |||||||||| |||||| |    
T  40741066 tcttgaaatatgaaaagtcaaatttaacacacatatacaaagaaatgataatttggtaatattaacacacaaaatagacatattaattacattaacaact 40740967  T
Q  673 tttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||    
T  40740966 tttcttaagaaatgtgaaaaa 40740946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 27162890 - 27163011
Alignment:
Q  571 cttgtcttaaaatat-aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaaca 669  Q
    |||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||| |||  ||||||||||| ||||||||    
T  27162890 cttgtcttgaaatatgaaaaagttaaatttaatacacatacaaacaaatgacaatttggcaatattaaaacacaaaat--acacattaattgcactaaca 27162987  T
Q  670 atttttcttaagaaatgtgaaaaa 693  Q
    | ||| ||||||||||||||||||    
T  27162988 actttacttaagaaatgtgaaaaa 27163011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 572 - 708
Target Start/End: Complemental strand, 27170128 - 27169993
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| || |||||  ||||||| ||||||||||||||||| |||||| |||||||| ||||||| ||||||||      
T  27170128 ttgtcttgaaatatgaaaagtcaaatttaatagacatatgaacaaatcacaatttggtaatatta-cacacaaaatagacaaattaattgcactaacatg 27170030  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgctta 708  Q
    || ||||||||||||||||||| |||||||| |||||    
T  27170029 ttgtcttaagaaatgtgaaaaatacaaagggagctta 27169993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 587 - 702
Target Start/End: Complemental strand, 21752630 - 21752515
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||| ||| ||||||| ||||||||| |||| ||||||||||    
T  21752630 aaaagtcaaatttaatacacatacaaacaaatgataatttggtaatattaacccacaaaataaacaaattaattgcactaacaactttttttaagaaatg 21752531  T
Q  687 tgaaaaacacaaaggg 702  Q
    || ||||  |||||||    
T  21752530 tggaaaatgcaaaggg 21752515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 573 - 675
Target Start/End: Original strand, 21392882 - 21392984
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||| || |||||||||||||||| ||||||||| |    
T  21392882 tgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaatataatttggtaatattaacactcaaaatagacacattaattgcactaacaaat 21392981  T
Q  673 ttt 675  Q
    |||    
T  21392982 ttt 21392984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 572 - 702
Target Start/End: Complemental strand, 23876154 - 23876024
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||  |||||| ||||||| |||||||||||||||| |||||||| |||||||||||||| | ||| |||| ||||| |||||||||||     
T  23876154 ttgtcttgaaatacgaaaagttaaatttaatacacatacaaacaaaagacaatttagtaatattaacacataaaatggacatattaactacactaacaac 23876055  T
Q  672 ttttcttaagaaatgtgaaaaacacaaaggg 702  Q
    |||| |||||||||||||||||  |||||||    
T  23876054 tttttttaagaaatgtgaaaaaagcaaaggg 23876024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 573 - 711
Target Start/End: Complemental strand, 35960494 - 35960356
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    |||||| |||||| ||||||||||||||  ||||||||||||||| || ||||| ||||||| || ||| | ||||||||||||||||  ||||||||||    
T  35960494 tgtcttgaaatatgaaaagtcaaatttaacacacatacaaacaaaagataatttagtaatataaatacataaaatagacacattaattgtactaacaatt 35960395  T
Q  673 tttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    ||| ||||| ||||||||||| |||| || |||||||||    
T  35960394 ttttttaaggaatgtgaaaaatacaatggatgcttacat 35960356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 37048153 - 37048031
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| || ||| ||||||| |||||||||||||||| |||||||||| || ||||||||||| || |||||||||||||||||| | ||    
T  37048153 cttgtattgaaatatgaatagttaaatttaatacacatacaaacaaaggacaatttgggaacattaacacacaaaacagacacattaattacactgataa 37048054  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  37048053 cttttcttaagaaatgtgaaaaa 37048031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 575 - 698
Target Start/End: Original strand, 18122033 - 18122156
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||  ||||||| |||||||| || ||||| |||||||||||||| | || ||||||| |||||||||| |||| |||    
T  18122033 tcttgaaatatgaaaagtcaaattttatacacattcaaacaaaggaaaatttagtaatattaacacataaaacagacacactaattacactcacaacttt 18122132  T
Q  675 tcttaagaaatgtgaaaaacacaa 698  Q
    ||||||||||||||||||| ||||    
T  18122133 tcttaagaaatgtgaaaaagacaa 18122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 26200955 - 26201077
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| ||||||||| |||||| ||||||| ||||||||||||||||  | |||||| ||||||||| ||||| |||||||||| ||||| |||||| ||    
T  26200955 cttgttttaaaatatgaaaagttaaatttaatacacatacaaacaaagaataatttgataatattaatacacaaaatagacacaataattgcactaataa 26201054  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||||||||||||| |||||||    
T  26201055 cttttcttaagaaatatgaaaaa 26201077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 33181413 - 33181291
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| | ||| || | ||||||||| |||||| ||||    
T  33181413 cttgtcttaaagtatgaaaagttaaatttaatacacatacaaacaaatgacaatttggtaatattaatatacaaaacaaacacattaactacactgacaa 33181314  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      ||| ||||||||| |||||||    
T  33181313 cattttttaagaaatatgaaaaa 33181291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 36726161 - 36726282
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  36726161 cttgttttgaaatatgaaaagtcaaatttaatacacata-aaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacactaacaa 36726259  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      | |||||||| ||| ||||||    
T  36726260 catctcttaagagatgcgaaaaa 36726282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 49100785 - 49100667
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | || |||||||||||||||||| |||| ||     
T  49100785 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacactgacaactta 49100686  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    | |||||| ||| ||||||    
T  49100685 ttttaagagatgcgaaaaa 49100667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 28663869 - 28663752
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| | |||||||||||| || |||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||  | ||||||  ||    
T  28663869 tcttgaaatatgagaagtcaaatttaatatacatacaaacaaataataatttgataatattaacacacaaaatagacacattaattgtattaacaa-ctt 28663771  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  28663770 tcttaagaaatgtgaaaaa 28663752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 571 - 712
Target Start/End: Original strand, 29636028 - 29636168
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| | ||||| | |||||||| ||||||| | ||||||||||||||||||||||| || |||||||||||||||| | ||||    
T  29636028 cttgtcttgaaatatgaaaaattaaattaaatacacataaaaacaaagg-caatttggtaatattaacacacaaaacagacacattaattacattgacaa 29636126  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     ||||||||| ||||||| ||||  ||||||| | |||||||    
T  29636127 cttttcttaaaaaatgtgtaaaatgcaaagggggtttacata 29636168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 582 - 685
Target Start/End: Complemental strand, 29993082 - 29992979
Alignment:
Q  582 atataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaag 681  Q
    |||| |||||| |||||||  | ||| |||||||||||| ||||||||| |||||||| ||| |||||||||||||||| ||||||||| ||||||||||    
T  29993082 atatgaaaagttaaatttaacaaacacacaaacaaatgataatttggtagtattaacatacaaaatagacacattaattgcactaacaacttttcttaag 29992983  T
Q  682 aaat 685  Q
    ||||    
T  29992982 aaat 29992979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 575 - 670
Target Start/End: Original strand, 43465134 - 43465229
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| |||||| |||||||||||||| |||||||||||||||| |||||||||  |||| ||||||||| || |||||||||||||||||| ||||    
T  43465134 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttgaaaatactaacacacaaaacagacacattaattacactgacaa 43465229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 571 - 690
Target Start/End: Original strand, 43601152 - 43601270
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||| ||||||| |||||||| |||||| | ||| ||| || |||||| | ||||||| ||||||    
T  43601152 cttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaattttgtaatacttaca-acaaaacagacacctcaattacattaacaa 43601250  T
Q  671 tttttcttaagaaatgtgaa 690  Q
     |||||||||||||||||||    
T  43601251 cttttcttaagaaatgtgaa 43601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 42983601 - 42983725
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||| | ||||||||  ||||||||||| | | || ||||||||||||||||| | |||    
T  42983601 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacataagacaatttaataatattaacatataaaagagacacattaattacaccatcaa 42983700  T
Q  671 --tttttcttaagaaatgtgaaaaa 693  Q
      ||||||| |||||| ||||||||    
T  42983701 cttttttctcaagaaacgtgaaaaa 42983725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 42993179 - 42993297
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| ||||||||| ||||||||| |||||| |  |||||| ||||||||||||| | ||||||||| ||||||  | |||||| |||    
T  42993179 tcttgaaatatgaaaaatcaaatttaatacacatactaacaaaggttaatttgataatattaacacataaaatagacacgttaattgtattaacaacttt 42993278  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    ||||||||||||| |||||    
T  42993279 tcttaagaaatgtaaaaaa 42993297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 572 - 677
Target Start/End: Original strand, 44648703 - 44648810
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggt--aatattaacacacagaatagacacattaattacactaaca 669  Q
    ||||||| |||||| |||| ||||||||| ||||||||||||| || ||||||||| |  |||||||||| ||| |||||||||||| |||||| |||||    
T  44648703 ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaactaaagacaatttgatccaatattaacatacaaaatagacacattgattacattaaca 44648802  T
Q  670 atttttct 677  Q
    | ||||||    
T  44648803 acttttct 44648810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 602 - 699
Target Start/End: Original strand, 10595117 - 10595212
Alignment:
Q  602 tacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaa 699  Q
    |||||||||||||||| |||| ||| |||||  ||||||||| || ||||| |||||||| ||| |||| ||||||||||||||||||||||| ||||    
T  10595117 tacacatacaaacaaaagacagtttcgtaat--taacacacaaaacagacatattaattatactgacaacttttcttaagaaatgtgaaaaacgcaaa 10595212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 608 - 679
Target Start/End: Original strand, 41672591 - 41672662
Alignment:
Q  608 tacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||||||| || ||||| || ||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  41672591 tacaaacaaaggataatttagttatattcacacacaaaatagacacattaattacactaacaagttttctta 41672662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 632
Target Start/End: Original strand, 13907730 - 13907791
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaat 632  Q
    |||||||| |||||| |||||||||||||| || ||||||||||||||||||||||| ||||    
T  13907730 cttgtctttaaatatgaaaagtcaaatttattaaacatacaaacaaatgacaatttgataat 13907791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 711
Target Start/End: Complemental strand, 29723579 - 29723439
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacac-agaatagacacattaattacactaaca 669  Q
    ||||| || |||||| |||||||||||||| || | || |||||||||||  |||| ||||||||| ||||| | || || ||||||||||||| | |||    
T  29723579 cttgtgttgaaatatgaaaagtcaaatttaatatatatgcaaacaaatgattatttcgtaatattaccacacaaaaacaggcacattaattacaatgaca 29723480  T
Q  670 atttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    | ||||| ||| |||||||||||| |||| |||||| |||||    
T  29723479 aattttc-taaaaaatgtgaaaaagacaatgggtgcctacat 29723439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 615 - 711
Target Start/End: Complemental strand, 20124262 - 20124166
Alignment:
Q  615 aaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    |||||| ||||| ||||| | || ||| | |||||||||||||||||||| ||||| ||||||||| ||||||||||||  |||| || ||||||||    
T  20124262 aaatgataatttagtaatgtcaatacataaaatagacacattaattacaccaacaacttttcttaaaaaatgtgaaaaaagcaaaaggggcttacat 20124166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 571 - 643
Target Start/End: Original strand, 47458173 - 47458245
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacaca 643  Q
    |||||||| ||||||||||  | ||||||| |||||||||||||||| ||||||||  |||||||||||||||    
T  47458173 cttgtcttgaaatataaaatattaaatttaatacacatacaaacaaaggacaatttcataatattaacacaca 47458245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 679
Target Start/End: Original strand, 10408564 - 10408663
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||| ||||||||| |||||||||||||||| ||||| || |||| ||| ||||||| | |||||||||||  ||||||| ||  ||||||||    
T  10408564 aaatatgaaaaatcaaatttaatacacatacaaacaaaggacaaattagtaaaattcacacacaaactagacacattatctacactaccacgttttctta 10408663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 687
Target Start/End: Complemental strand, 36195452 - 36195393
Alignment:
Q  628 gtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgt 687  Q
    |||||||| | ||||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  36195452 gtaatatttatacacaaaatagacacattaattatactaacaatttttctaaagaaatgt 36195393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 575 - 634
Target Start/End: Complemental strand, 37136295 - 37136236
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatat 634  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||| |||||||| ||||    
T  37136295 tcttaaaatatgaaaagtcaaatttaacacacatacaaacaaatgataatttggttatat 37136236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 680
Target Start/End: Complemental strand, 25828242 - 25828130
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacataca-------aacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaa 667  Q
    |||| ||||||||||||||||||||| ||||||||||       ||||||  | ||||| |||||||||||||||| ||||| || |||||||  |||||    
T  25828242 tcttgaaatataaaaagtcaaatttagtacacatacactgtgcaaacaaaatataatttcgtaatattaacacacaaaataggcatattaattttactaa 25828143  T
Q  668 caatttttcttaa 680  Q
    ||| |||||||||    
T  25828142 caacttttcttaa 25828130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 587 - 693
Target Start/End: Original strand, 19477415 - 19477524
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatga----caatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaaga 682  Q
    ||||||| |||||| ||||||||||||||||  |    ||||||||||| ||||||| | | |||| || |||||||||||||||||| ||||||||| |    
T  19477415 aaaagtcgaatttaatacacatacaaacaaaaaaaaaacaatttggtaacattaacatataaaataaacgcattaattacactaacaacttttcttaa-a 19477513  T
Q  683 aatgtgaaaaa 693  Q
    ||||| |||||    
T  19477514 aatgtaaaaaa 19477524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 639
Target Start/End: Original strand, 24700692 - 24700751
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaaca 639  Q
    |||||| |||||||||  ||| ||||||||||||||||  ||||||||||||||||||||    
T  24700692 aaatatgaaaagtcaacattaatacacatacaaacaaagaacaatttggtaatattaaca 24700751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 680
Target Start/End: Original strand, 38729678 - 38729786
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaa--tgacaatttggtaatattaacacacagaatagacacattaattacactaac 668  Q
    ||||||||||||||| |||| | ||||||| ||||||||||||||||    ||||||   || |||| | ||| |||||| ||||||||||| || ||||    
T  38729678 cttgtcttaaaatatgaaaaataaaatttaatacacatacaaacaaaatatacaatt---tagtattcaaacatagaataaacacattaatttcattaac 38729774  T
Q  669 aatttttcttaa 680  Q
    ||||||||||||    
T  38729775 aatttttcttaa 38729786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 643
Target Start/End: Original strand, 28038875 - 28038948
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaac-aaatgacaatttggtaatattaacacaca 643  Q
    |||||||| |||||| |||||| ||||||| |||| |||||||| |||  || |||||||||||||||||||||    
T  28038875 cttgtcttgaaatatgaaaagttaaatttaatacaaatacaaacaaaaaaaccatttggtaatattaacacaca 28038948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 602 - 693
Target Start/End: Complemental strand, 4068486 - 4068395
Alignment:
Q  602 tacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||  | |||||| ||||||||||| ||| |||||| | ||||||| || |||||| |||| | || |||| |||||||    
T  4068486 tacacatacaaacaaagaataatttgataatattaacatacaaaatagatatattaattgcattaacaacttttttaaaaaaatatgaaaaa 4068395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 40101769 - 40101819
Alignment:
Q  241 gttaatcacgtgcaaaaatatgtttaattcagttgagtggatggtgaattc 291  Q
    |||||| ||||||||||| ||| ||||||||||||||| |||||| |||||    
T  40101769 gttaatgacgtgcaaaaacatgattaattcagttgagtagatggttaattc 40101819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 656
Target Start/End: Complemental strand, 43026135 - 43026053
Alignment:
Q  575 tcttaaaatat-aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacatt 656  Q
    ||||||||||| ||||| | ||||||| |||||||||| ||||| || | |||  ||||||| ||||||| ||||||||||||    
T  43026135 tcttaaaatatgaaaaaattaaatttaatacacatacatacaaaagatagtttaataatattcacacacaaaatagacacatt 43026053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 711
Target Start/End: Complemental strand, 12645590 - 12645534
Alignment:
Q  654 attaattacactaacaatttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    |||||||||||||||||||||| ||||||||||||| |||  ||||||  ||||||||    
T  12645590 attaattacactaacaattttt-ttaagaaatgtgataaaagcaaaggaggcttacat 12645534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 640
Target Start/End: Complemental strand, 12645635 - 12645602
Alignment:
Q  607 atacaaacaaatgacaatttggtaatattaacac 640  Q
    |||||||||||||| |||||||||||||||||||    
T  12645635 atacaaacaaatgataatttggtaatattaacac 12645602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 33010345 - 33010390
Alignment:
Q  16 atcaactttttataatttttgctaagaggtaattaaagatgttaaa 61  Q
    |||||||||||||||||||| |||| || ||||||||||| |||||    
T  33010345 atcaactttttataatttttactaatagataattaaagatattaaa 33010390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 5e-46; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 573 - 714
Target Start/End: Complemental strand, 4745243 - 4745101
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||||||| | |    
T  4745243 tgtcttaaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacccacaaaataaacacattaattgcactaactact 4745144  T
Q  673 tttctt-aagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    |||||| || ||||||||||||  |||||||||||||||||||    
T  4745143 tttcttaaaaaaatgtgaaaaatgcaaagggtgcttacataca 4745101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 3559017 - 3559135
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||    
T  3559017 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattataccaacaatttt 3559116  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  3559117 tcttaagaaatgtgaaaaa 3559135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 572 - 712
Target Start/End: Original strand, 39690473 - 39690613
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | |||||||||||||| |||||||||||     
T  39690473 ttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaac 39690572  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    ||||||||||||||||||||||  ||||||| | |||||||    
T  39690573 ttttcttaagaaatgtgaaaaaagcaaaggggggttacata 39690613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 571 - 698
Target Start/End: Original strand, 25017660 - 25017787
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| ||||    
T  25017660 cttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacacaaaacagacacattaattatactgacaa 25017759  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
      |||||||||||| |||||||| ||||    
T  25017760 catttcttaagaaacgtgaaaaagacaa 25017787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 571 - 685
Target Start/End: Complemental strand, 600883 - 600769
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  600883 cttgtcttaaaatataaaaaatcaaatttaatacatatacaaacaaatgacaatttgataatattaacacacataatagacacattaattgcactaacaa 600784  T
Q  671 tttttcttaagaaat 685  Q
     ||||||||||||||    
T  600783 gttttcttaagaaat 600769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 571 - 714
Target Start/End: Complemental strand, 20946205 - 20946062
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||    
T  20946205 cttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacgttaattgcactaacaa 20946106  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
      ||||||||||||| |||||||  ||| || ||||||||||||    
T  20946105 cgtttcttaagaaatatgaaaaatgcaatggatgcttacataca 20946062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 571 - 694
Target Start/End: Complemental strand, 29866307 - 29866184
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||| || ||||| ||||||| |||||||||    
T  29866307 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaacttggtaatattaacacacaaaaaagacatattaattgcactaacaa 29866208  T
Q  671 tttttcttaagaaatgtgaaaaac 694  Q
     |||||||||||||||||||||||    
T  29866207 cttttcttaagaaatgtgaaaaac 29866184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 580 - 698
Target Start/End: Complemental strand, 36177401 - 36177283
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | || ||||||||    
T  36177401 aaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaatagacacattaattacactgataacttttctta 36177302  T
Q  680 agaaatgtgaaaaacacaa 698  Q
    |||||||| ||||| ||||    
T  36177301 agaaatgtaaaaaagacaa 36177283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 38972117 - 38972234
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||   | |||||||||||||||||||||||||| |||    
T  38972117 tcttgaaatataaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacattta-aatagacacattaattacactaacaacttt 38972215  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  38972216 tcttaagaaatgtgaaaaa 38972234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 575 - 732
Target Start/End: Original strand, 4857484 - 4857645
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacac----attaattacactaacaa 670  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | |||||||||    |||||||||||||||||    
T  4857484 tcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttagtaatattaacacataaaatagacacattaattaattacactaacaa 4857583  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacatacatggatgcatgaagtattt 732  Q
     |||| |||||||||||||||||  |||  || | ||||||||| ||| | |||||||||||    
T  4857584 cttttattaagaaatgtgaaaaaagcaataggggtttacatacagggacggatgaagtattt 4857645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 575 - 702
Target Start/End: Complemental strand, 27642616 - 27642489
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||| ||||||||||||||| |||||||||||||||| || ||||| |||||||||||||| | |||||||||||||| ||||||||||| |||    
T  27642616 tcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggataatttagtaatattaacacataaaatagacacattaactacactaacaacttt 27642517  T
Q  675 tcttaagaaatgtgaaaaacacaaaggg 702  Q
    |||||||||||||||||||  |||||||    
T  27642516 tcttaagaaatgtgaaaaaagcaaaggg 27642489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 588 - 701
Target Start/End: Original strand, 43060513 - 43060626
Alignment:
Q  588 aaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgt 687  Q
    ||||||||||||| |||||||||||||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||    
T  43060513 aaagtcaaatttaatacacatacaaacaaaagataatatggtaatattaacacacaaaatagacacattaattacactaacaacttttattaaaaaatgt 43060612  T
Q  688 gaaaaacacaaagg 701  Q
    |||||| |||||||    
T  43060613 gaaaaaaacaaagg 43060626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 27798274 - 27798147
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||| || ||||| |||||||||||| ||||    
T  27798274 cttgtcttgaaatatgaaaagtcaaacttaatacacatacaaacaaatgataatttgataatattaacacacaaaacagacaaattaattacactgacaa 27798175  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
    | |||||||| |||||||||||| ||||    
T  27798174 tatttcttaaaaaatgtgaaaaatacaa 27798147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 572 - 702
Target Start/End: Complemental strand, 21912237 - 21912107
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||| ||||||||||| ||| |||||||||||||||| ||||||||  ||||||||||||| | |||||||||||||| |||||||||||     
T  21912237 ttgtcttgaaatacaaaaagtcaaacttaatacacatacaaacaaaagacaatttaataatattaacacataaaatagacacattaactacactaacaac 21912138  T
Q  672 ttttcttaagaaatgtgaaaaacacaaaggg 702  Q
    ||||||||| ||||||||||||  |||||||    
T  21912137 ttttcttaataaatgtgaaaaaagcaaaggg 21912107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 34877784 - 34877662
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||| || |||||||||||||| |||||| |||||||||||| |||||||||||||||||||||| || ||||| |||||||||||| ||||    
T  34877784 cttgtcttgaaaaatgaaaagtcaaatttaatacacacacaaacaaatgataatttggtaatattaacacacaaaacagacaaattaattacactgacaa 34877685  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      |||||||||||||||||||||    
T  34877684 catttcttaagaaatgtgaaaaa 34877662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 21574867 - 21575006
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||| || ||||| |||||||| ||||| |||||||||| ||||||||||||||||||||| ||| |||||||||||||| |||||||| ||    
T  21574867 cttgtcttgaaacatgaaaagacaaatttaatacac-tacaaacaaaggacaatttggtaatattaacatacaaaatagacacattaagtacactaaaaa 21574965  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
      ||||||||||||||||||||| |||| |||||| |||||    
T  21574966 catttcttaagaaatgtgaaaaagacaatgggtgcctacat 21575006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 580 - 692
Target Start/End: Complemental strand, 41521297 - 41521185
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  41521297 aaatatgaaaagtcaaatttaatacacatataaacaaatgacaatttaataatattaacacacaaaatagacatattaatttcactaacaatttttctta 41521198  T
Q  680 agaaatgtgaaaa 692  Q
    | |||||| ||||    
T  41521197 aaaaatgtaaaaa 41521185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 4738748 - 4738621
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||| ||||||| | |||||| |||||||||||||||| || | | |||||||||||||| ||||    
T  4738748 cttgtcttgaaatatgaaaagtcaaatttaatacacataaaaacaaaggtcaatttagtaatattaacacacaaaacaaatacattaattacactgacaa 4738649  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
    | ||||||||||||||||||||| ||||    
T  4738648 tatttcttaagaaatgtgaaaaagacaa 4738621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 571 - 710
Target Start/End: Original strand, 30348063 - 30348202
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| ||| |||||| |||||||||||||| |||||| ||||||||| || |||||||||||||||||||||| |||||||||||||| || | ||||||    
T  30348063 cttgccttgaaatatgaaaagtcaaatttaatacacacacaaacaaaggaaaatttggtaatattaacacacaaaatagacacattaagtaaattaacaa 30348162  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttaca 710  Q
     ||||||| ||||||||||||||  ||||| | |||||||    
T  30348163 cttttcttcagaaatgtgaaaaaagcaaagagggcttaca 30348202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 3247264 - 3247382
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||| ||| || ||||| ||||||||||||  ||| |||    
T  3247264 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacatattaattacactgtcaacttt 3247363  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  3247364 tcttaagaaatgtgaaaaa 3247382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 10523260 - 10523382
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||||| ||||||||||| |||||||| |||||||  |||||||||||||||||||||||| || |||||||||||||||||| | ||    
T  10523260 cttgtcttgaaatataaatagtcaaatttaatacacataaaaacaaaaaacaatttggtaatattaacacacaaaacagacacattaattacactgataa 10523359  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| |||| |||||||    
T  10523360 cttttcttaaaaaatatgaaaaa 10523382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 702
Target Start/End: Original strand, 12895195 - 12895328
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||  ||||    
T  12895195 cttgtcttaaaatttaaaaaatcaaatttaatacacatacaaacaaaagacaatttggtaatattaatacacaaaacagacacattaattacaccgacaa 12895294  T
Q  671 tttttc--ttaagaaatgtgaaaaacacaaaggg 702  Q
     || ||  |||| |||||||||||| ||||||||    
T  12895295 cttctcttttaaaaaatgtgaaaaaaacaaaggg 12895328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 692
Target Start/End: Original strand, 15898449 - 15898570
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | ||| | |||||||| |||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||| ||||    
T  15898449 cttgtcttgaaatttgaaaggccaaatttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaa 15898548  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
     ||||||||||||| |||||||    
T  15898549 cttttcttaagaaaagtgaaaa 15898570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 587 - 693
Target Start/End: Complemental strand, 27587940 - 27587834
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||| ||||||||| |||||||||| ||||| |||||||| |||||||||||||||| || |||||||||||||| ||| |||| |||||||||||||||    
T  27587940 aaaaatcaaatttaatacacatacatacaaaggacaatttagtaatattaacacacaaaacagacacattaattatactgacaacttttcttaagaaatg 27587841  T
Q  687 tgaaaaa 693  Q
    |||||||    
T  27587840 tgaaaaa 27587834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 16969491 - 16969370
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    |||||||||||||| |||| |||||||||  ||||||||||| |||| ||| |||| ||||||||||| ||| | ||||||||||||||| |||||||||    
T  16969491 ttgtcttaaaatattaaaattcaaatttaacacacatacaaataaataacagtttgataatattaacaaacaaattagacacattaattatactaacaat 16969392  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    |||| |||| ||||||||||||    
T  16969391 ttttgttaaaaaatgtgaaaaa 16969370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 572 - 693
Target Start/End: Original strand, 35568992 - 35569113
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||  | ||||| |||||||||| ||| | || |||||||||||||||||| | ||     
T  35568992 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaagaataatttagtaatattaatacataaaacagacacattaattacactgataac 35569091  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||    
T  35569092 ttttcttaagaaatgtgaaaaa 35569113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 573 - 693
Target Start/End: Complemental strand, 11980832 - 11980712
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    ||||||||||||| |||||||||||||| |||||||| |||||   || ||| | |||||||||||||||| |||||||||||||||||||||||||| |    
T  11980832 tgtcttaaaatatgaaaagtcaaatttaatacacatataaacagtggataatatagtaatattaacacacaaaatagacacattaattacactaacaact 11980733  T
Q  673 tttcttaagaaatgtgaaaaa 693  Q
    ||| |||| |||| |||||||    
T  11980732 tttattaaaaaatatgaaaaa 11980712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 580 - 693
Target Start/End: Complemental strand, 18729701 - 18729584
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaa----tgacaatttggtaatattaacacacagaatagacacattaattacactaacaattttt 675  Q
    |||||| |||||||||||||| ||||||||||||||||    ||| | |||  ||||||||||||||| |||||||||||||||||||| || |||||||    
T  18729701 aaatatgaaaagtcaaatttaatacacatacaaacaaacaaatgatactttaataatattaacacacaaaatagacacattaattacacaaataattttt 18729602  T
Q  676 cttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||    
T  18729601 cttaagaaatgtgaaaaa 18729584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 5845294 - 5845172
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| || | | |||||||||||||| ||||    
T  5845294 cttgtattgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaatacacaaaacaaatacattaattacactgacaa 5845195  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
       |||||||||||| |||||||    
T  5845194 caattcttaagaaatatgaaaaa 5845172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 10934124 - 10934002
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| ||||||||||||||||  | |||||||||||||||||| ||| || |||||||||||||||||| ||||    
T  10934124 cttgtattgaaatatgaaaagtcaaatttaatacacatacaaacaaagaataatttggtaatattaacatacaaaacagacacattaattacactgacaa 10934025  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      ||||| || ||||||||||||    
T  10934024 catttctgaaaaaatgtgaaaaa 10934002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 611 - 693
Target Start/End: Complemental strand, 32067906 - 32067824
Alignment:
Q  611 aaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |||||||||||||||||| |||||    
T  32067906 aaacaaatgacaatttggtaatattaacacacaaaatagacacatgaattgcactaactatttttcttaagaaatgtaaaaaa 32067824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 575 - 692
Target Start/End: Complemental strand, 16496550 - 16496434
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| || ||||||||||||| || |||||||||||||||| ||||| |||||||| | ||||||||||||||| |||    
T  16496550 tcttgaaatatgaaaagtcaaatttaatatacatacaaacaaaggataatttggtaatattaatacaca-aatagacataataattacactaacaacttt 16496452  T
Q  675 tcttaagaaatgtgaaaa 692  Q
    |  |||||||||||||||    
T  16496451 tggtaagaaatgtgaaaa 16496434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 16101 - 16223
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||||||||||||| |||| ||||||||||| |||||||| |||||||| ||||| | |||||| ||||||||| |||||||||    
T  16101 cttgtcttgaaatgtgaaaagtcaaatttaatacaaatacaaacaaaggacaatttagtaatattcacacaaaaaatagatacattaattgcactaacaa 16200  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||| | | ||||||||||||||    
T  16201 ctttccgttagaaatgtgaaaaa 16223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 587 - 711
Target Start/End: Original strand, 3631122 - 3631244
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||||||||||||| |||||||||||||||| | |||||  |||||||||||||||| ||  ||||||||||||||||  ||||||||| ||||||||||    
T  3631122 aaaagtcaaatttaatacacatacaaacaaaggtcaattgcgtaatattaacacacaaaaccgacacattaattacac-gacaattttt-ttaagaaatg 3631219  T
Q  687 tgaaaaacacaaagggtgcttacat 711  Q
    ||||||| |||| || ||| |||||    
T  3631220 tgaaaaagacaatggatgcctacat 3631244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 40979198 - 40979338
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||| ||||| || | |||  ||||||||  | ||||    
T  40979198 cttgtctttaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaatacacaaaacatacatgttaattaccttgacaa 40979297  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     |||| ||||||||| ||||||| |||| || ||| |||||    
T  40979298 cttttattaagaaatatgaaaaagacaatggatgcctacat 40979338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 9375629 - 9375746
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| ||||||||| || ||||||||||||| |||||||||||||||||| |||||| |||| | | ||||||| |||||| ||||||    
T  9375629 tcttgaaatatgaaaaatcaaatttaataaacatacaaacaaaagacaatttggtaatattagcacacaaaataaatatattaattgcactaataatttt 9375728  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    || ||| ||||||||||||    
T  9375729 tcctaa-aaatgtgaaaaa 9375746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 14044488 - 14044606
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| ||||||||||||||  ||||||| ||| |||||| |||||| ||||||||| ||| | |||||||| ||||| | || |||||| |||    
T  14044488 tcttcaaatatgaaaagtcaaatttaacacacataaaaataaatgataatttgataatattaatacataaaatagacatattaactgcattaacaacttt 14044587  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  14044588 tcttaagaaatgtgaaaaa 14044606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 36347587 - 36347709
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | || ||||||||||| ||||||||||||||||   ||||||| ||||||||| ||||| || ||| |||||||||||||| ||||    
T  36347587 cttgtcttgaaatgtgaatagtcaaatttaatacacatacaaacaaaaatcaatttgataatattaatacacaaaacagatacattaattacactgacaa 36347686  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| ||||||||| |||||||    
T  36347687 cttttattaagaaatctgaaaaa 36347709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 571 - 669
Target Start/End: Original strand, 42644464 - 42644562
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaaca 669  Q
    |||||||| |||||| ||||| |||||||| || ||||||||||||||||||||||| |||||||| || ||| ||||  |||||||||||||||||||    
T  42644464 cttgtcttgaaatatgaaaagacaaatttaatatacatacaaacaaatgacaatttgataatattagcatacaaaataatcacattaattacactaaca 42644562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 602 - 699
Target Start/End: Original strand, 31642486 - 31642582
Alignment:
Q  602 tacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaa 699  Q
    |||||||| ||||||| |||| |||||||||||||||||||| || |||||||||||||||||| ||||||||| |||| ||||||| |||| |||||    
T  31642486 tacacatataaacaaaagacagtttggtaatattaacacacaaaa-agacacattaattacactgacaattttttttaataaatgtgtaaaatacaaa 31642582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 571 - 712
Target Start/End: Complemental strand, 43454100 - 43453959
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||| ||||||||| |||||||||||||||| || | |||| ||||||||||| ||| ||  ||||||||||||| ||||||||    
T  43454100 cttgtcttgaaatttgaaaaatcaaatttaatacacatacaaacaaaagatagtttgataatattaacatacaaaactgacacattaattatactaacaa 43454001  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     |||| ||||||||| | ||||| | |||||| | |||||||    
T  43454000 ctttttttaagaaatataaaaaatataaagggggtttacata 43453959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 580 - 699
Target Start/End: Complemental strand, 10656699 - 10656582
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| ||||||||||||||  ||  ||||||| ||| || ||||||||||| |||||||| | ||||  |||||||||| || |||||||||||||||    
T  10656699 aaatatgaaaagtcaaatttaacaccaatacaaaaaaaagataatttggtaattttaacacataaaata--cacattaattgcattaacaatttttctta 10656602  T
Q  680 agaaatgtgaaaaacacaaa 699  Q
    |||||||||||||| |||||    
T  10656601 agaaatgtgaaaaaaacaaa 10656582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 625 - 708
Target Start/End: Complemental strand, 7510670 - 7510587
Alignment:
Q  625 ttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagggtgctta 708  Q
    ||||||||||||||||||| || | |||||||||||||||||| || ||||||||| |||||||||||| |||||||| |||||    
T  7510670 ttggtaatattaacacacaaaacatacacattaattacactaataacttttcttaaaaaatgtgaaaaatacaaagggggctta 7510587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 3529991 - 3529873
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggt-aatattaacacacagaatagacacattaattacactaacaa-tt 672  Q
    |||||||||||||| ||||||||||| |||||||| |||||||  ||||||| || ||||||   ||||| ||||||||||||||||| |||||||| ||    
T  3529991 tcttaaaatataaatagtcaaatttaatacacatataaacaaagaacaatttagtaaatatt--tacacaaaatagacacattaattatactaacaattt 3529894  T
Q  673 tttcttaagaaatgtgaaaaa 693  Q
    ||| |||||||||| ||||||    
T  3529893 ttttttaagaaatgcgaaaaa 3529873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 586 - 712
Target Start/End: Original strand, 25690688 - 25690816
Alignment:
Q  586 aaaaagtcaaatttactacacatacaaacaaatgacaatttggta--atattaacacacagaatagacacattaattacactaacaatttttcttaagaa 683  Q
    |||||||  |||||| |||||||||||||||| |||||||||  |  ||||||||||||| || | |||||||||||||||  |||| ||||||||||||    
T  25690688 aaaaagttgaatttaatacacatacaaacaaaggacaatttgtaactatattaacacacaaaacatacacattaattacaccgacaacttttcttaagaa 25690787  T
Q  684 atgtgaaaaacacaaagggtgcttacata 712  Q
    ||||||| ||  ||||||| ||| |||||    
T  25690788 atgtgaacaaagcaaagggggctaacata 25690816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 571 - 698
Target Start/End: Original strand, 9946344 - 9946471
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||||||||||| |||||| ||||| |||||||||| || ||||| |||||||||| ||  | || |||||||||||||| |   ||||    
T  9946344 cttgtcttgaaatataaaaagtcgaatttaatacacgtacaaacaaaggataatttcgtaatattaatacgtaaaacagacacattaattatatcgacaa 9946443  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     |||| |||| |||||||||||| ||||    
T  9946444 cttttattaaaaaatgtgaaaaagacaa 9946471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 572 - 643
Target Start/End: Original strand, 19089008 - 19089079
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacaca 643  Q
    |||| ||||||||| |||||||||||||| |||| |||||||||||||||||||| |||||||||| |||||    
T  19089008 ttgttttaaaatatgaaaagtcaaatttaatacaaatacaaacaaatgacaatttagtaatattaatacaca 19089079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 36750762 - 36750882
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || ||||||||||||||||||||| |||||||| ||||||| |||| | |  ||||||||||||||  || | |||||||| |||| |||||||    
T  36750762 cttgttttgaaatataaaaagtcaaatttaatacacatataaacaaaggacagtctaataatattaacacac--aaaacacacattacttacgctaacaa 36750859  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| ||||||| |||||||||    
T  36750860 cttttattaagaattgtgaaaaa 36750882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 571 - 652
Target Start/End: Original strand, 5151186 - 5151267
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagaca 652  Q
    |||||||| |||||| |||||||||||||| |||||| ||||| ||| ||||||||||||||||||| ||||| || |||||    
T  5151186 cttgtcttgaaatatgaaaagtcaaatttaatacacacacaaataaaggacaatttggtaatattaatacacaaaaaagaca 5151267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 572 - 685
Target Start/End: Original strand, 24781256 - 24781367
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||| | |||| ||||||||| |||||||||||| |||  |||||||| ||||||||||| ||| |||| |||||||||||||| |||| ||    
T  24781256 ttgtcttcaaatgtgaaaaatcaaatttaatacacatacaaa-aaagaacaatttgataatattaacatacaaaataaacacattaattacattaactat 24781354  T
Q  672 ttttcttaagaaat 685  Q
    |||| |||||||||    
T  24781355 tttt-ttaagaaat 24781367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 653 - 732
Target Start/End: Complemental strand, 4378178 - 4378099
Alignment:
Q  653 cattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagggtgcttacatacatggatgcatgaagtattt 732  Q
    |||||||||||||||||| |||| |||||||||||||||||  |||| ||  |||||||||||||| | |||||||||||    
T  4378178 cattaattacactaacaactttttttaagaaatgtgaaaaaagcaaaaggaacttacatacatggacgaatgaagtattt 4378099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 622 - 693
Target Start/End: Original strand, 15967149 - 15967220
Alignment:
Q  622 aatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||| ||||| || |||||||||||||||||  ||||  |||||||||||||||||||||    
T  15967149 aatttggtaatattaatacacaaaacagacacattaattacaccgacaacctttcttaagaaatgtgaaaaa 15967220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 580 - 643
Target Start/End: Complemental strand, 30317858 - 30317795
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacaca 643  Q
    |||||| |||||||||||||| |||||| ||||||||| || ||||||||||||||||||||||    
T  30317858 aaatatgaaaagtcaaatttaatacacacacaaacaaaggaaaatttggtaatattaacacaca 30317795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 33583931 - 33583809
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||||||| ||  ||| ||||||||| ||||| |  ||| ||| || ||||| |||||||||||||||| ||||| | |||| || ||| ||||||    
T  33583931 cttgtcttaaaaaatgtaaaatcaaatttaatacacgtttaaataaaggataatttagtaatattaacacacaaaatagtcgcattgataacattaacaa 33583832  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| |||||||||||||||||    
T  33583831 ctttttttaagaaatgtgaaaaa 33583809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 675
Target Start/End: Original strand, 731938 - 732043
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatg-acaatttggtaatattaacacacagaatagacacattaattacactaaca 669  Q
    |||||||| |||||| ||||  |||||||| |||||||||||||||| | |||||||| ||||||||||||||| || | ||| ||||| |||| ||| |    
T  731938 cttgtcttgaaatatgaaaaaacaaatttaatacacatacaaacaaaagaacaatttgataatattaacacacaaaacaaacatattaactacattaata 732037  T
Q  670 attttt 675  Q
    ||||||    
T  732038 attttt 732043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 614 - 667
Target Start/End: Complemental strand, 29874253 - 29874200
Alignment:
Q  614 caaatgacaatttggtaatattaacacacagaatagacacattaattacactaa 667  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  29874253 caaatgacaatttggtaatattaacacacaaaatagatacattaactacactaa 29874200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 632
Target Start/End: Original strand, 32401440 - 32401501
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaat 632  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||| |||| |||||||||    
T  32401440 cttgtcttaaaatatgaaaaatcaaatttaatacacatacaaacaaaagacattttggtaat 32401501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 575 - 680
Target Start/End: Complemental strand, 457887 - 457780
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacaca--tacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    ||||||||||| ||| |||||||||| ||||||  || ||||||||||||||||  ||||||| | ||||| |||||| |||||||||  |||||||| |    
T  457887 tcttaaaatatgaaatgtcaaatttaatacacacatataaacaaatgacaatttaataatattcagacacaaaatagatacattaattgtactaacaact 457788  T
Q  673 tttcttaa 680  Q
    ||| ||||    
T  457787 tttattaa 457780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 8717945 - 8718001
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttg 627  Q
    |||||||| |||||| |||||||||||||| |||| |||||||||||||||||||||    
T  8717945 cttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaatgacaatttg 8718001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 619 - 702
Target Start/End: Original strand, 33862849 - 33862932
Alignment:
Q  619 gacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctt-aagaaatgtgaaaaacacaaaggg 702  Q
    |||||||| |||||||||  | ||| || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  33862849 gacaatttagtaatattagtatacaaaacagacacattaattacactgacaatttttcttaaagaaatgtgaaaaa-acaaaggg 33862932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 592 - 663
Target Start/End: Original strand, 19281498 - 19281569
Alignment:
Q  592 tcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattaca 663  Q
    ||||||||| |||||||||||||||| || ||||| |||||||||| ||||| || ||| ||||||||||||    
T  19281498 tcaaatttaatacacatacaaacaaaagataatttagtaatattaatacacaaaacagatacattaattaca 19281569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 620 - 665
Target Start/End: Complemental strand, 129679 - 129634
Alignment:
Q  620 acaatttggtaatattaacacacagaatagacacattaattacact 665  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  129679 acaatttggtaatattaatacacaaaatagacacattaattacact 129634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 636
Target Start/End: Complemental strand, 556118 - 556054
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatatta 636  Q
    ||||||| |||||| |||||||||||||| |||| ||||| | |||||||||||| |||||||||    
T  556118 ttgtcttgaaatatgaaaagtcaaatttaatacatatacagaaaaatgacaatttagtaatatta 556054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 580 - 639
Target Start/End: Complemental strand, 34676230 - 34676171
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaaca 639  Q
    |||||| | ||||||||||||  ||||||||||||||| || ||||||||||||||||||    
T  34676230 aaatatgataagtcaaatttaacacacatacaaacaaaggataatttggtaatattaaca 34676171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 628
Target Start/End: Complemental strand, 7736094 - 7736041
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttgg 628  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||| |||||||    
T  7736094 tcttgaaatatgaaaagtcaaatttaacacacatacaaacaaatgataatttgg 7736041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 648 - 693
Target Start/End: Original strand, 20976353 - 20976398
Alignment:
Q  648 agacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||| |||| |||||||||||||| |||||||    
T  20976353 agacacattaattacactgacaaattttcttaagaaatatgaaaaa 20976398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 699
Target Start/End: Original strand, 32402092 - 32402171
Alignment:
Q  620 acaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaa 699  Q
    ||||||||||||||| ||||| ||  | |||||||||||||| ||| |||| |||| || |||||||| ||||| |||||    
T  32402092 acaatttggtaatatcaacacgcaacacagacacattaattaaactgacaacttttttttagaaatgtcaaaaatacaaa 32402171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 5e-46; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 572 - 714
Target Start/End: Original strand, 27047168 - 27047309
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||      
T  27047168 ttgtcttaaaatataaaaagtcaaatttaatgcacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattgcactaacagc 27047267  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    |||||||||| |||||| ||||  |||||||||||||||||||    
T  27047268 ttttcttaaggaatgtg-aaaatgcaaagggtgcttacataca 27047309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 11388234 - 11388116
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| ||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11388234 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaatacaatttggtaatattaacacgcaaaatagacacattaattacactaacaatttt 11388135  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  11388134 tcttaagaaatgtgaaaaa 11388116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 20945289 - 20945411
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| || |||| ||||||||||||||| | ||||||||||||||||||||||||||    
T  20945289 cttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaaggataattaggtaatattaacacataaaatagacacattaattacactaacaa 20945388  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  20945389 cttttcttaagaaatgtgaaaaa 20945411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 14645878 - 14646000
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14645878 cttgtcttgaaatttgaaaaatcaaatttaatacacatacaaacaaataacaatttggtaatattaacacacaaaatagacacattaattacactaacaa 14645977  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  14645978 cttttcttaaaaaatgtgaaaaa 14646000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 571 - 712
Target Start/End: Original strand, 26517204 - 26517345
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| | || |||||||||||||||||| ||||    
T  26517204 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggacaatttggtaatattaacacagaaaacagacacattaattacactgacaa 26517303  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     ||||||||||||||||||||||  |||||||  ||||||||    
T  26517304 cttttcttaagaaatgtgaaaaatgcaaagggaacttacata 26517345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 571 - 700
Target Start/End: Complemental strand, 50363144 - 50363015
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | || ||||| |||||||||||| ||||    
T  50363144 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaatacataaaacagacatattaattacactgacaa 50363045  T
Q  671 tttttcttaagaaatgtgaaaaacacaaag 700  Q
    |||||||||| |||||||||||| ||||||    
T  50363044 tttttcttaaaaaatgtgaaaaaaacaaag 50363015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 12077732 - 12077872
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  12077732 cttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaagagacacattaattacactgacaa 12077831  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     |||||||||||||| |||||||  ||| |||||| |||||    
T  12077832 cttttcttaagaaatttgaaaaatgcaatgggtgcctacat 12077872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 46048639 - 46048517
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||| ||||| || |||||||||||||||||| ||||    
T  46048639 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaatacacaaaacagacacattaattacactgacaa 46048540  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  46048539 cttttcttaagaaatgtgaaaaa 46048517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 575 - 714
Target Start/End: Complemental strand, 44083740 - 44083599
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  44083740 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttggtaatattaacacacaaaatagatacattaattacaataacaatttt 44083641  T
Q  675 tctt-aagaaatgtg-aaaaacacaaagggtgcttacataca 714  Q
    |||| || ||||||| ||||| ||||||||  ||||||||||    
T  44083640 tcttaaaaaaatgtgaaaaaaaacaaaggggacttacataca 44083599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 26043132 - 26043014
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||| || ||||| |||||||||||| ||||||||    
T  26043132 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaacattaacacacaaaacagacatattaattacactgacaatttt 26043033  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    ||||||||||||| |||||    
T  26043032 tcttaagaaatgtaaaaaa 26043014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 27638066 - 27638188
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||| |||||||||| |||||||||||||||| ||||||||  ||||||||||||||| |||||| |||||||||||||||| ||    
T  27638066 cttgtcttgaaatatgaaatgtcaaatttaatacacatacaaacaaaggacaattttataatattaacacacaaaatagagacattaattacactaataa 27638165  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  27638166 cttttcttaagaaatgtgaaaaa 27638188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 33287983 - 33287861
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||  ||||||||||||||| |||||||| |||||||||||||  ||    
T  33287983 cttgtcttgaaatataaaaagtcaaatttaatacacaaacaaacaaaggacaatttaataatattaacacacaaaatagacaaattaattacactacaaa 33287884  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  33287883 cttttcttaagaaatgtgaaaaa 33287861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 41727227 - 41727349
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  41727227 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggacaattttgtaatattaacacacaaaacagacacattaattacactgacaa 41727326  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| |||||||||||||||||    
T  41727327 ctttttttaagaaatgtgaaaaa 41727349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 717
Target Start/End: Complemental strand, 42891536 - 42891390
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||||||||||||| || ||||||||||||| |||| |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  42891536 cttgtctttaaatttgaaaagtcaaatttaatatacatacaaacaaaggacagtttggtaatattaacacacaaaacagacaaattaattatactaacaa 42891437  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacatacatgg 717  Q
     |||||||||||||||||||||| |||||| | | ||||||| ||||    
T  42891436 cttttcttaagaaatgtgaaaaatacaaagagggtttacataaatgg 42891390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 51263195 - 51263077
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||| ||||||| | || |||||||||||||||||||||||||||    
T  51263195 tctttaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatactaacacataaaacagacacattaattacactaacaatttt 51263096  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    | |||||||||||||||||    
T  51263095 ttttaagaaatgtgaaaaa 51263077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 571 - 692
Target Start/End: Original strand, 41825126 - 41825247
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||||| ||| |||||||||  |||||||||||||||| || |||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  41825126 cttgtcttaaaatatgaaatgtcaaatttgatacacatacaaacaaaagataatttggtaatattaacacataaaatagacacattaattacactgacaa 41825225  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
     |||||||||||| ||||||||    
T  41825226 cttttcttaagaagtgtgaaaa 41825247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 29676728 - 29676868
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||| | |||||||| |||||||||||| ||| |||||||| |||||||||||||| | ||||||||||||||||||||| ||||    
T  29676728 cttgtcttgaaatatgaaatgccaaatttaatacacatacaaataaaagacaatttcgtaatattaacacataaaatagacacattaattacactgacaa 29676827  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    ||||||||||||||| |||||||  ||| |||||| |||||    
T  29676828 tttttcttaagaaatatgaaaaaggcaatgggtgcctacat 29676868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 575 - 711
Target Start/End: Complemental strand, 30476154 - 30476018
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| || ||||||||||||| |||||||| |||||||||||||||| || |||||||||||||||||| |||| |||    
T  30476154 tcttgaaatatgaaaagtcaaatttaatagacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttt 30476055  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    |||||| ||||||||||||  ||| |||||| |||||    
T  30476054 tcttaaaaaatgtgaaaaaggcaatgggtgcctacat 30476018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 571 - 702
Target Start/End: Original strand, 13084347 - 13084478
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| ||||||| | |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| || |||||||||||||| ||| ||||    
T  13084347 cttgtgttaaaatttgaaaagtcaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaacagacacattaattatactgacaa 13084446  T
Q  671 tttttcttaagaaatgtgaaaaacacaaaggg 702  Q
     |||||||||||||| ||||||| | ||||||    
T  13084447 cttttcttaagaaatatgaaaaaaataaaggg 13084478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 587 - 714
Target Start/End: Complemental strand, 25750628 - 25750501
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||| |||||||| |||||||||| ||||||  ||||||||||||||    
T  25750628 aaaagtcaaatttaatacacatacaaacaaagaacaagttggtaatattaacacacaaaatagacaaattaattacattaacaacctttcttaagaaatg 25750529  T
Q  687 tgaaaaacacaaagggtgcttacataca 714  Q
    | |||||  ||||||| |||||||||||    
T  25750528 taaaaaaagcaaagggagcttacataca 25750501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 575 - 718
Target Start/End: Complemental strand, 26121445 - 26121302
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| ||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||| || | |||||||||||||||| |||| |||    
T  26121445 tcttgaaatatgaaaagtcaagtttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacattaattacactgacaacttt 26121346  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacatacatgga 718  Q
    ||||||||||||| |||||  ||||  | |||||||||||||||    
T  26121345 tcttaagaaatgtaaaaaatgcaaaaagagcttacatacatgga 26121302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 578 - 693
Target Start/End: Complemental strand, 29645468 - 29645353
Alignment:
Q  578 taaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttct 677  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | || ||| |||||||||||||||||||  |||||    
T  29645468 taaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacataaaacagatacattaattacactaacaacatttct 29645369  T
Q  678 taagaaatgtgaaaaa 693  Q
    ||| ||||||||||||    
T  29645368 taataaatgtgaaaaa 29645353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 575 - 690
Target Start/End: Original strand, 48901510 - 48901625
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    ||||||||||| |||||||||||||| || | |||||||||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||| |||||    
T  48901510 tcttaaaatattaaaagtcaaatttaatatatatacaaacaaatgacaatttagtaatattaacacacaaaatagacaaattaattgcactaactatttt 48901609  T
Q  675 tcttaagaaatgtgaa 690  Q
    |||||| |||||||||    
T  48901610 tcttaataaatgtgaa 48901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 587 - 712
Target Start/End: Original strand, 46435737 - 46435860
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||| |||||||||||||||    
T  46435737 aaaagtcaaatttaataca--tacaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatg 46435834  T
Q  687 tgaaaaacacaaagggtgcttacata 712  Q
    |||||||  ||||||| | |||||||    
T  46435835 tgaaaaaagcaaagggggtttacata 46435860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 575 - 713
Target Start/End: Original strand, 52325496 - 52325634
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| | |||| || || ||||| ||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||    
T  52325496 tcttgaaatatgaaaaataaaatgtaataaacatataaacaaaggacaatttgataatattaacacataaaatagacacattaattacactaacattttt 52325595  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacatac 713  Q
    |||||||||||||||||||  ||||| ||||||||||||    
T  52325596 tcttaagaaatgtgaaaaatgcaaagagtgcttacatac 52325634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 31819522 - 31819401
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | || |||||||||||||||||  | ||     
T  31819522 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacaccgataac 31819423  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||    
T  31819422 ttttcttaagaaatgtgaaaaa 31819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 37729027 - 37729140
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| | |||||||||||| |||||||||||||||| || ||| || ||||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  37729027 aaatatgagaagtcaaatttaatacacatacaaacaaaagataatatgataatattaacacacaaaatagacacattaattatattaacaatttttctta 37729126  T
Q  680 agaaatgtgaaaaa 693  Q
    ||||||||||||||    
T  37729127 agaaatgtgaaaaa 37729140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 575 - 699
Target Start/End: Complemental strand, 42010981 - 42010857
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| ||||||||||||||  | |||||||||||||  | |||||| ||||||||||||||| ||||||||||||||||||| |||||| |||    
T  42010981 tcttgaaatatgaaaagtcaaatttaacatacatacaaacaaagaataatttgataatattaacacacaaaatagacacattaattacattaacaaattt 42010882  T
Q  675 tcttaagaaatgtgaaaaacacaaa 699  Q
    ||||||||||||||||||| |||||    
T  42010881 tcttaagaaatgtgaaaaaaacaaa 42010857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 50524965 - 50525105
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||| |  | |     
T  50524965 cttgtcttgaaatttcaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaatatacatattaattaccccgagag 50525064  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     ||||||||||||||||||||||   |||||||||||||||    
T  50525065 cttttcttaagaaatgtgaaaaaagaaaagggtgcttacat 50525105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 575 - 690
Target Start/End: Original strand, 48903076 - 48903191
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| || | |||||||||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||| |||||    
T  48903076 tcttgaaatattaaaagtcaaatttaatatatatacaaacaaatgacaatttagtaatattaacacacaaaatagacaaattaattgcactaactatttt 48903175  T
Q  675 tcttaagaaatgtgaa 690  Q
    |||||| |||||||||    
T  48903176 tcttaataaatgtgaa 48903191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 35055903 - 35055782
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||   |  |||| |    
T  35055903 cttgtattgaaatataaaaagtcaaatttaatacacatacaagcaaatgacaatttggtaatattaacacacaaaatagacacattaa-agcgttaacta 35055805  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  35055804 cttttcttaagaaatgtgaaaaa 35055782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 40645791 - 40645669
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||||  ||| |||| |||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||  ||||    
T  40645791 cttgtcttgaaatatgaaaaaccaagtttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaacagacacattaattacacagacaa 40645692  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      |||||||||||||||||||||    
T  40645691 catttcttaagaaatgtgaaaaa 40645669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 580 - 693
Target Start/End: Complemental strand, 22659688 - 22659575
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||| ||||||| |||||||||||||||| || |||||||||||||||||||||| |||| | |||||||||| |||||||| ||||||||    
T  22659688 aaatatgaaaagttaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaataaatacattaattatactaacaacttttctta 22659589  T
Q  680 agaaatgtgaaaaa 693  Q
    |||||||| |||||    
T  22659588 agaaatgtaaaaaa 22659575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 575 - 692
Target Start/End: Complemental strand, 44338194 - 44338078
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| | | |||||| ||||| ||||||||||| |||    
T  44338194 tcttgaaatataaaaagtcaaatttaatacacatagaaacaaaggacaatttggtaatattaacacaaaaattagaca-attaactacactaacaacttt 44338096  T
Q  675 tcttaagaaatgtgaaaa 692  Q
    |||||| |||||||||||    
T  44338095 tcttaaaaaatgtgaaaa 44338078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 605 - 712
Target Start/End: Original strand, 31650688 - 31650795
Alignment:
Q  605 acatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagggtg 704  Q
    ||||||||| |||||||||||||||||||||| |||| | |||||||||||||||| || ||||||||||| |||| ||||||||||||  |||||||||    
T  31650688 acatacaaataaatgacaatttggtaatattaccacataaaatagacacattaattgcattaacaattttttttaataaatgtgaaaaatgcaaagggtg 31650787  T
Q  705 cttacata 712  Q
    ||||||||    
T  31650788 cttacata 31650795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 11344674 - 11344553
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || ||||||||||| ||||||||| |||||||||||| |||  | ||||||||||| |||||||||| |||||||||||||||||||| || ||    
T  11344674 cttgtattgaaatataaaaaatcaaatttaatacacatacaaa-aaagaataatttggtaatgttaacacacaaaatagacacattaattacaccaataa 11344576  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  11344575 cttttcttaagaaatgtgaaaaa 11344553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 26999008 - 26998890
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    ||||||||||| |||| ||||||||| ||||| |||||||||| |||||||| |||||||||||| ||| |||||| |||||||||| | | |||| |||    
T  26999008 tcttaaaatatgaaaaatcaaatttaatacacgtacaaacaaaagacaatttcgtaatattaacaaacaaaatagatacattaattataatgacaacttt 26998909  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  26998908 tcttaagaaatgtgaaaaa 26998890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 677
Target Start/End: Original strand, 39617239 - 39617345
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||| ||| || |||||||||||||||||| ||||    
T  39617239 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactgacaa 39617338  T
Q  671 tttttct 677  Q
     ||||||    
T  39617339 cttttct 39617345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 41739966 - 41740084
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| |||||||||  ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||  | ||| ||||||    
T  41739966 tcttgaaatatgaaaattcaaatttaacacacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaattgtattaataatttt 41740065  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||| ||||||||||||    
T  41740066 tcttaaaaaatgtgaaaaa 41740084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 576 - 693
Target Start/End: Original strand, 54425950 - 54426067
Alignment:
Q  576 cttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaattttt 675  Q
    |||||||||| |||| | ||||||| |||||||| ||||||||||||||||||||||||||||||||| || |||||||| || |||| | | | |||||    
T  54425950 cttaaaatatgaaaaattaaatttaatacacatataaacaaatgacaatttggtaatattaacacacaaaacagacacatcaactacattgatatttttt 54426049  T
Q  676 cttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||    
T  54426050 cttaagaaatgtgaaaaa 54426067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 571 - 670
Target Start/End: Complemental strand, 29611951 - 29611852
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||| |||||||||  |||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  29611951 cttgtcttgaaatatgaaatgtcaaatttgatacacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaattacactaacaa 29611852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 575 - 713
Target Start/End: Complemental strand, 26243585 - 26243447
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||||||||  ||| ||||||||||| || | ||| |||||||||||| ||||  ||    
T  26243585 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttaataacattaacacacaaaacaaacatattaattacactgacaacctt 26243486  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacatac 713  Q
    | |||| |||||| ||||| ||||| || ||||||||||    
T  26243485 ttttaaaaaatgtaaaaaatacaaaaggggcttacatac 26243447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 41308765 - 41308887
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||||| |||||||| |||||||| |||||||  | || ||||||||||||||||||| || |||||||||||||||||| ||||    
T  41308765 cttgtcttgaaatatgaaaagccaaatttaatacacatataaacaaagaataaattggtaatattaacacacaaaacagacacattaattacactgacaa 41308864  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      ||| |||||||||||||||||    
T  41308865 cattttttaagaaatgtgaaaaa 41308887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 41543596 - 41543718
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||| |||||||||| |||||||||||| ||| ||||||||  |||||||| |||||| |||||||||||||| |||||  ||||    
T  41543596 cttgtcttgaaatatgaaatgtcaaatttaatacacatacaaataaaagacaattttataatattatcacacaaaatagacacattaaatacacagacaa 41543695  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| |||||||||||||||||    
T  41543696 ctttttttaagaaatgtgaaaaa 41543718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 605 - 693
Target Start/End: Original strand, 31531448 - 31531536
Alignment:
Q  605 acatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||| ||||||||| |||||| |||||||| || |||||||||||||||||| |||| ||||||||||||||||||||||    
T  31531448 acatacaaacaaaagacaatttgataatatcaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaa 31531536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 575 - 690
Target Start/End: Complemental strand, 48309557 - 48309443
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| ||||||||||||||  ||||||||||||||| || ||||| |||||||||||| ||| |||||||||| ||||| ||||||||| |||    
T  48309557 tcttgaaatatgaaaagtcaaatttaacacacatacaaacaaaggataattttgtaatattaacatacaaaatagacaca-taattgcactaacaacttt 48309459  T
Q  675 tcttaagaaatgtgaa 690  Q
    |||||||||| |||||    
T  48309458 tcttaagaaacgtgaa 48309443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 2421201 - 2421080
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||  |||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||| |  ||||| | |||||||  | ||||||    
T  2421201 cttgtctttgaatataaaaagtcaaatttaatatacatacaaacaaatgacaattttgtaatattaacacataagataga-aaattaattgtattaacaa 2421103  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| |||||||||||||||||    
T  2421102 ctttttttaagaaatgtgaaaaa 2421080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 572 - 678
Target Start/End: Complemental strand, 28477501 - 28477395
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| || ||||||||||| | |||||||||||||| ||||||||||||||||||||||||| || ||||||||||||| |||  ||||     
T  28477501 ttgtcttgaaatatgaatagtcaaatttaatgcacatacaaacaaaagacaatttggtaatattaacacacaaaacagacacattaattgcaccgacaac 28477402  T
Q  672 ttttctt 678  Q
    |||||||    
T  28477401 ttttctt 28477395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 580 - 680
Target Start/End: Original strand, 33411973 - 33412071
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| ||||| |||||||| ||||  |||||| |||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  33411973 aaatatgaaaagacaaatttaataca--tacaaagaaaaaacaatttggtaatattaacacacaaaatagacacattaattgcactaacaatttttctta 33412070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 605 - 693
Target Start/End: Complemental strand, 11394005 - 11393917
Alignment:
Q  605 acatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||| ||| ||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  11394005 acatataaataaatgacaatttgatagtattaacacacaaaatagacacattaattacactaacaactttttttaaaaaatgtgaaaaa 11393917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 575 - 659
Target Start/End: Complemental strand, 21933039 - 21932955
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaat 659  Q
    |||| |||||| ||||||||||||||  ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  21933039 tcttgaaatatgaaaagtcaaatttaacacacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaat 21932955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 831358 - 831471
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||| ||||||||| |||||||| ||||||| |||||||||||||||||||||| ||  | |  ||||||||||||| | |||| ||||||||    
T  831358 aaatatgaaaaatcaaatttaatacacatataaacaaaggacaatttggtaatattaacacgcaatacatgcacattaattacattgacaacttttctta 831457  T
Q  680 agaaatgtgaaaaa 693  Q
    |||||| |||||||    
T  831458 agaaatatgaaaaa 831471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 21864410 - 21864294
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| ||||||||| || ||||||||| ||| |||||||||||||||||| |||| | |||||||||| ||||| ||||  |||||||    
T  21864410 tcttgaaatatgaaaattcaaatttaatatacatacaaaaaaa-gacaatttggtaatattagcacataaaatagacaca-taattgcactgtcaatttt 21864313  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||| ||||||||||||||    
T  21864312 tcttgagaaatgtgaaaaa 21864294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 603 - 693
Target Start/End: Original strand, 43187114 - 43187204
Alignment:
Q  603 acacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||| |||||||| |||||||||| ||||| || |||||||||||||||| | |||| |||| ||||||||| |||||||    
T  43187114 acacatacaaacaaaggacaatttcgtaatattaatacacaaaacagacacattaattacattgacaactttttttaagaaatatgaaaaa 43187204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 575 - 701
Target Start/End: Complemental strand, 49000564 - 49000439
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||||||||||||||| | ||||||| |||||||| ||||| | |||| |||| |||||| |  ||||| |||||||||||||||| ||  ||||| |||    
T  49000564 tcttaaaatataaaaaattaaatttaatacacataaaaacagaggacactttgataatat-attacacaaaatagacacattaattgcatcaacaacttt 49000466  T
Q  675 tcttaagaaatgtgaaaaacacaaagg 701  Q
    |||||| |||||||||||| |||||||    
T  49000465 tcttaaaaaatgtgaaaaagacaaagg 49000439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 50092785 - 50092663
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||||| ||| |||| |||||||||||| ||| |||||||| |||||||||| ||||| ||   ||||||||||||||||  |||    
T  50092785 cttgtcttgaaatatgaaaagacaattttaatacacatacaaataaaggacaattttgtaatattaatacacaaaaccaacacattaattacactgtcaa 50092686  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| ||||||||||| |||||    
T  50092685 cttttgttaagaaatgtaaaaaa 50092663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 35145347 - 35145235
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| |||| ||||||||||| || ||||| |||||||||||         |||||| ||||||||||| ||||     
T  35145347 ttgtcttgaaatatgaaaagtcaaatttaatacaaatacaaacaaaggataatttcgtaatattaac---------agacacgttaattacactcacaac 35145257  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||    
T  35145256 ttttcttaagaaatgtgaaaaa 35145235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 572 - 693
Target Start/End: Original strand, 54555914 - 54556035
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    |||||||||| ||| |||||| ||| ||| || ||||| |||||||||| |||||||||| ||||||| | | |||||||| ||||||||||||||||      
T  54555914 ttgtcttaaagtatgaaaagttaaaattaatatacatataaacaaatgataatttggtaaaattaacatataaaatagacatattaattacactaacagc 54556013  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
     ||| ||||||||| |||||||    
T  54556014 atttattaagaaatatgaaaaa 54556035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 571 - 659
Target Start/End: Complemental strand, 39931998 - 39931910
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaat 659  Q
    ||||||||||||||| |||| | ||||||| |||||||||||||||||||||||||  |||  |||||||||| |||| ||||||||||    
T  39931998 cttgtcttaaaatatgaaaactaaaatttaatacacatacaaacaaatgacaatttaataaccttaacacacaaaatatacacattaat 39931910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 631 - 702
Target Start/End: Complemental strand, 23157152 - 23157081
Alignment:
Q  631 atattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaaggg 702  Q
    |||||||| |||| || |||||||||||||||||| |||||||||||||||||||||||| || ||||||||    
T  23157152 atattaactcacaaaacagacacattaattacactgacaatttttcttaagaaatgtgaacaaaacaaaggg 23157081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 571 - 658
Target Start/End: Complemental strand, 28229282 - 28229195
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaa 658  Q
    ||||||||||||||| |||||||||||||| || ||||||||| ||| ||||||||||||||||||| ||| | |||| | |||||||    
T  28229282 cttgtcttaaaatattaaaagtcaaatttaatatacatacaaataaaggacaatttggtaatattaatacataaaatatatacattaa 28229195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 580 - 671
Target Start/End: Complemental strand, 28243867 - 28243776
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||||||||| ||||||| |||||| | ||||||| ||||||||| | ||||||||||||| |||| |||||||||||||  |||||||    
T  28243867 aaatataaaaagttaaatttaatacacacataaacaaaggacaatttgattatattaacacacaaaataaacacattaattaccttaacaat 28243776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 587 - 693
Target Start/End: Original strand, 34055869 - 34055973
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||||||||| ||| || ||||| |||  |||||||||||  ||||||||||||||| || ||||| |||||||||| | ||||||||| ||||||||||    
T  34055869 aaaagtcaaagttaatatacataaaaa--aatgacaatttcataatattaacacacaaaacagacatattaattacattgacaattttttttaagaaatg 34055966  T
Q  687 tgaaaaa 693  Q
    |||||||    
T  34055967 tgaaaaa 34055973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 572 - 685
Target Start/End: Complemental strand, 28228295 - 28228182
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||| || |||||||| ||||| ||||||||||||||||||||  |||| |||||| |||||||| |    ||||||||||| |||||||||     
T  28228295 ttgtcttgaaaaatgaaaagtcacatttaatacacatacaaacaaatgacgttttgataatatgaacacacaaacacaacacattaattgcactaacaac 28228196  T
Q  672 ttttcttaagaaat 685  Q
    |||| |||||||||    
T  28228195 tttttttaagaaat 28228182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 31474540 - 31474419
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    |||||||||||| | ||||   ||||||| ||||||||||||||||||| |||||  |||||||||| |||| || |||||||||| ||| || || ||     
T  31474540 ttgtcttaaaatttgaaaaactaaatttaatacacatacaaacaaatgataatttaataatattaacgcacaaaacagacacattagttataccaaaaaa 31474441  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||| |||||| |||||    
T  31474440 ttttcttaaaaaatgtaaaaaa 31474419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 602 - 714
Target Start/End: Complemental strand, 11140791 - 11140679
Alignment:
Q  602 tacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagg 701  Q
    |||||||||||||||| || |||||||||||| ||||||||| || | |||||||| ||||||| | || |||||||||  |||||||||||   ||| |    
T  11140791 tacacatacaaacaaaggataatttggtaatactaacacacaaaacatacacattatttacactgataacttttcttaaacaatgtgaaaaatgtaaaag 11140692  T
Q  702 gtgcttacataca 714  Q
    | |||||||||||    
T  11140691 gggcttacataca 11140679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 48581435 - 48581313
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||  |||||| |||| ||||||||| |||||||| ||| ||| || | |||| ||||||||| ||||| |||| ||||||||| ||||  || ||    
T  48581435 cttgtctggaaatatgaaaaatcaaatttaatacacataaaaataaaggatagtttgttaatattaatacacaaaataaacacattaactacatcaataa 48581336  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| |||||||||||||||||    
T  48581335 ctttttttaagaaatgtgaaaaa 48581313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 592 - 693
Target Start/End: Complemental strand, 48213721 - 48213620
Alignment:
Q  592 tcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaa 691  Q
    ||||| ||| |||||||||||| |||||| |||  ||||||||||||||||| |||| |||||||||||  | ||| || ||||||||| |||| |||||    
T  48213721 tcaaaattaatacacatacaaataaatgataataaggtaatattaacacacaaaataaacacattaattttattaataacttttcttaaaaaatatgaaa 48213622  T
Q  692 aa 693  Q
    ||    
T  48213621 aa 48213620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 621 - 693
Target Start/End: Original strand, 35765685 - 35765757
Alignment:
Q  621 caatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||| ||||| || ||||| |||||||||||| | || ||||||||||||||||| ||||    
T  35765685 caatttggtaatattaatacacaaaacagacatattaattacactgataacttttcttaagaaatgtggaaaa 35765757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 580 - 685
Target Start/End: Original strand, 4979769 - 4979873
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacac-acagaatagacacattaattacactaacaatttttctt 678  Q
    ||||||||||||||||||||  || ||||| |||||||| | | ||||||||||||||||| | | |||||| ||||||||| ||||||| | |||||||    
T  4979769 aaatataaaaagtcaaattt--tatacatataaacaaattaaattttggtaatattaacacaaaaaaatagaaacattaattgcactaactacttttctt 4979866  T
Q  679 aagaaat 685  Q
    || ||||    
T  4979867 aaaaaat 4979873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 635 - 690
Target Start/End: Complemental strand, 23068086 - 23068032
Alignment:
Q  635 taacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaa 690  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||    
T  23068086 taacacacaaaatagacacattaattacaataacaatttttcttaa-aaatgtgaa 23068032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 12236400 - 12236276
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||  |||||| |||||||  ||||| |||| ||||||| |||  |||||||| ||||||||||||    ||||| ||||||||||||| ||||||    
T  12236400 cttgtctagaaatattaaaagtcgtatttaatacaaatacaaataaagaacaatttgataatattaacacgtgaaatagccacattaattacattaacaa 12236301  T
Q  671 --tttttcttaagaaatgtgaaaaa 693  Q
      ||||| |||||| ||||||||||    
T  12236300 atttttttttaagagatgtgaaaaa 12236276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 635
Target Start/End: Complemental strand, 44647893 - 44647829
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatatt 635  Q
    ||||| ||| ||||| |||||||||||| | |||||||| |||||||||||||||| ||||||||    
T  44647893 cttgtattacaatatgaaaagtcaaattaaatacacatataaacaaatgacaatttagtaatatt 44647829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 634 - 693
Target Start/End: Original strand, 53717578 - 53717637
Alignment:
Q  634 ttaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||| || |||||||||||||||| | ||||| ||||||||||||||| |||||    
T  53717578 ttaacacacaaaacagacacattaattacattgacaatatttcttaagaaatgtaaaaaa 53717637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 587 - 680
Target Start/End: Complemental strand, 383707 - 383614
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    |||||| ||||| | |||||||| |||||||||| ||||| |||| ||| ||||||| | |||| | ||| | ||||||| |||||||||||||    
T  383707 aaaagttaaattaaatacacatataaacaaatgataatttagtaaaattcacacacaaactagatatattgactacactaccaatttttcttaa 383614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 615
Target Start/End: Original strand, 5504564 - 5504608
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaaca 615  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||    
T  5504564 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaaca 5504608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 690
Target Start/End: Complemental strand, 23071480 - 23071437
Alignment:
Q  647 tagacacattaattacactaacaatttttcttaagaaatgtgaa 690  Q
    ||||||||||||||||| |||||||||||||| | |||||||||    
T  23071480 tagacacattaattacaataacaatttttcttgaaaaatgtgaa 23071437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 638
Target Start/End: Complemental strand, 31826309 - 31826242
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaac 638  Q
    ||||||||  |||||| ||| ||||||||| ||||||||||||||||  |||||| | ||||||||||    
T  31826309 cttgtcttgcaatatacaaaatcaaatttaatacacatacaaacaaagaacaattagataatattaac 31826242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 626
Target Start/End: Original strand, 8818125 - 8818171
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaattt 626  Q
    ||||||||||||||||||||| || | ||| ||||||||||||||||    
T  8818125 aaatataaaaagtcaaatttaatatatatataaacaaatgacaattt 8818171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 587 - 685
Target Start/End: Original strand, 38668529 - 38668627
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaat 685  Q
    ||||| |||||| | |||||||| ||| |||||||||||| |||| ||| ||||||| | || | ||||||| |||||||   ||||||||||| ||||    
T  38668529 aaaagacaaattaaatacacatataaataaatgacaatttagtaaaattcacacacaaactaaatacattaactacactactgatttttcttaataaat 38668627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 626
Target Start/End: Original strand, 8325214 - 8325263
Alignment:
Q  577 ttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaattt 626  Q
    ||||||||| |||| ||||||||| ||| ||||||||||||||| |||||    
T  8325214 ttaaaatatgaaaattcaaatttaatacccatacaaacaaatgataattt 8325263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 31746402 - 31746515
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  31746402 aaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaatagacacattaattgcactaacaatttttctta 31746501  T
Q  680 agaaatgtgaaaaa 693  Q
    ||||||||||||||    
T  31746502 agaaatgtgaaaaa 31746515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 571 - 714
Target Start/End: Original strand, 14577640 - 14577783
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| ||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  14577640 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaagtacaatttggtaatattaacaaacaaaatagacacattaattacactaacaa 14577739  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
     ||||||||||||||||||||||   ||||| ||||||||||||    
T  14577740 cttttcttaagaaatgtgaaaaatgtaaaggatgcttacataca 14577783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 572 - 710
Target Start/End: Complemental strand, 25888712 - 25888574
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||||||||| || ||||||||||| ||| |||||||| |||||||||||||||||     
T  25888712 ttgtcttaaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatatgataatattaacatacaaaatagacatattaattacactaacaac 25888613  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttaca 710  Q
    |||||||||||||||| ||||| ||||  ||||||||||    
T  25888612 ttttcttaagaaatgtaaaaaatacaacaggtgcttaca 25888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 575 - 712
Target Start/End: Original strand, 26878720 - 26878857
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||||  ||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||    
T  26878720 tcttgaaatatgtaaagtcaaatttaatatacatacaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattacattaacaacttt 26878819  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    |||||||||||||||||||  ||||||| | |||||||    
T  26878820 tcttaagaaatgtgaaaaaggcaaagggggtttacata 26878857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 572 - 702
Target Start/End: Original strand, 24962354 - 24962484
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||| ||||||| ||||||| |||||||||||||||| |||||||| |||||||||||||| | |||||||||||||| |||||||||||     
T  24962354 ttgtcttgaaatacaaaaagttaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaac 24962453  T
Q  672 ttttcttaagaaatgtgaaaaacacaaaggg 702  Q
    ||||||||||||||||||||||  |||||||    
T  24962454 ttttcttaagaaatgtgaaaaaagcaaaggg 24962484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 571 - 692
Target Start/End: Original strand, 36309584 - 36309703
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||    
T  36309584 cttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacggtaacaa 36309683  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
     |||  ||||||||||||||||    
T  36309684 attt--ttaagaaatgtgaaaa 36309703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 36437619 - 36437497
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||| ||||||||     
T  36437619 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatgttaacacacaaaatagacacattaattgcactaacat 36437520  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    |||||||||| ||||||| ||||    
T  36437519 tttttcttaaaaaatgtggaaaa 36437497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 43980575 - 43980693
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||| ||||||||||| |||    
T  43980575 tcttgaaatacaaaaagtcaaatttaatacacatacaaacaaatgataatttagtaatattaacacataaaatagacacattaactacactaacaacttt 43980674  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  43980675 tcttaagaaatgtgaaaaa 43980693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 582 - 714
Target Start/End: Complemental strand, 17933812 - 17933680
Alignment:
Q  582 atataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaata-ttaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||   |||||||||||||     
T  17933812 atatgaaaagtcaaatttaatacacatacaaacaaatgacagtttggtaatatttaacacacaaaatagacacattaattacatcgacaatttttcttac 17933713  T
Q  681 gaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    ||||||||||||| |||||||| |||||||||||    
T  17933712 gaaatgtgaaaaa-acaaagggggcttacataca 17933680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 571 - 720
Target Start/End: Complemental strand, 45203876 - 45203728
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| ||| |||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||| |||||| ||    
T  45203876 cttgtcttgaaatatgaaaagtcaaatttaatacgcatacaaacaaaggacaagttggtaatattaacatacaaaatagacacattaattgcactaa-aa 45203778  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacatacatggatg 720  Q
      ||||||||||||||| |||||  ||||||||||||||||||| |||||    
T  45203777 aatttcttaagaaatgtaaaaaatgcaaagggtgcttacatacagggatg 45203728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 575 - 711
Target Start/End: Complemental strand, 25185144 - 25185008
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| ||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||| |||| |||    
T  25185144 tcttgaaatatgaaaagacaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacagacacattagttacactgacaacttt 25185045  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    |||||||||||||||||||  ||| |||||| |||||    
T  25185044 tcttaagaaatgtgaaaaaggcaatgggtgcatacat 25185008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 38770175 - 38770315
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||| ||||    
T  38770175 cttgtcttgaaatatgaaaagtcaaaattaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaataaacacattaattacactgacaa 38770274  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     || ||||||||||| ||||||| |||| | |||| |||||    
T  38770275 cttatcttaagaaatatgaaaaagacaatgcgtgcctacat 38770315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 24512159 - 24512277
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||| |||| |||    
T  24512159 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaacagacacattaattacactgacaaattt 24512258  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||| ||||||||||||    
T  24512259 tcttaaaaaatgtgaaaaa 24512277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 25198403 - 25198285
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| || | |||||||||||||||| |||| |||    
T  25198403 tcttgaaatatgaaaagtcaaattttatacacatacaaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacactgacaacttt 25198304  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  25198303 tcttaagaaatgtgaaaaa 25198285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 34882784 - 34882666
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    ||||||||||| ||||||||||||||  ||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||| || ||||||||||    
T  34882784 tcttaaaatatgaaaagtcaaatttaacacacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaattgcattaacaatttt 34882685  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||| ||||||||||||    
T  34882684 tcttaaaaaatgtgaaaaa 34882666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 572 - 714
Target Start/End: Complemental strand, 44255570 - 44255429
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| || || |||||||||||| || |||      
T  44255570 ttgtctttaaatataaaaagtcaaatttaatacacgtacaaacaaatgacaatttgataatattaacacacaaaaaaggcacattaattacgctcacatc 44255471  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    ||||||||| ||||||||||||  ||||||| |||||||||||    
T  44255470 ttttcttaacaaatgtgaaaaa-gcaaagggagcttacataca 44255429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 581 - 702
Target Start/End: Original strand, 2562728 - 2562849
Alignment:
Q  581 aatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||| ||| || |||||||||||||||||| ||| ||||||||||    
T  2562728 aatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactgacagtttttcttaa 2562827  T
Q  681 gaaatgtgaaaaacacaaaggg 702  Q
    |||||||||||||  |||||||    
T  2562828 gaaatgtgaaaaaagcaaaggg 2562849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 571 - 698
Target Start/End: Original strand, 57176 - 57303
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||| || |||||||||||||||||  ||||    
T  57176 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 57275  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     |||||||||||||||||||||| ||||    
T  57276 cttttcttaagaaatgtgaaaaaaacaa 57303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 24276545 - 24276665
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || ||||||  ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  24276545 cttgttttgaaatatgtaaagtaaaatttaatacacatacaaacaaatgacaatttggtaatattaacacac--aatagacacattaattatactaacaa 24276642  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| |||||||||||||||||    
T  24276643 ctttttttaagaaatgtgaaaaa 24276665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 37956239 - 37956112
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||||||||||| || || ||||||||||||| ||||| || |||||||||||||||| || |||||||||||||||||| ||||    
T  37956239 cttgtcttgaaatatgaaaagtcaaatctaatatacatacaaacaaaggacaaattcgtaatattaacacacaaaacagacacattaattacactgacaa 37956140  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     |||||||||||||||||||||| ||||    
T  37956139 cttttcttaagaaatgtgaaaaagacaa 37956112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 572 - 711
Target Start/End: Complemental strand, 40790905 - 40790767
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| || |||| ||||||||||||| ||||     
T  40790905 ttgtcttgaaatatgaatagtcaaatttattacatatacaaacaaatgacaatttggtaatattaatacaca-aacagacgcattaattacactgacaac 40790807  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    |||||||||||||||||||||| | |||||| | ||||||    
T  40790806 ttttcttaagaaatgtgaaaaaaataaagggggtttacat 40790767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 7172333 - 7172215
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| ||||||||| |||| | |||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| || || |||    
T  7172333 tcttgaaatatgaaaagtcaattttaatgcacatacaaacaaatgacaattttataatattaacacacaaaatagacacattaattacaccaaaaagttt 7172234  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  7172233 tcttaagaaatgtgaaaaa 7172215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 14846909 - 14847031
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| |||| |  |||||||||||||||||  ||||    
T  14846909 cttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaagacaatatggtaatattaacgcacaaagcagacacattaattacaccgacaa 14847008  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  14847009 cttttcttaaaaaatgtgaaaaa 14847031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 38761346 - 38761468
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||||||||| || |||||||||||||||||| ||||    
T  38761346 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttcataatattaacacacaaaacagacacattaattacactgacaa 38761445  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| |||| |||| |||||||    
T  38761446 ctttttttaataaatatgaaaaa 38761468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 572 - 693
Target Start/End: Original strand, 5191538 - 5191658
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||| ||||||||| |||||||| ||||||  ||||||||||||||||||||||||| || ||||||||||||| | ||||||||    
T  5191538 ttgtcttgaaatatgaaaaatcaaatttaatacacatataaacaatggacaatttggtaatattaacacacaaaacagacacattaattgc-ctaacaat 5191636  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||    
T  5191637 ttttcttaagaaatgtgaaaaa 5191658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 571 - 692
Target Start/End: Complemental strand, 41087092 - 41086971
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||| || |||||| ||||||||||||||| |  |||||||||||||||||| ||||    
T  41087092 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaaggaaaatttgataatattaacacacaaatcagacacattaattacactgacaa 41086993  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
    | ||||||||||||||||||||    
T  41086992 tatttcttaagaaatgtgaaaa 41086971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 587 - 711
Target Start/End: Complemental strand, 37141828 - 37141704
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || ||| |||||||||||||| |||| |||| |||| |||||    
T  37141828 aaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacagatacattaattacactgacaactttttttaaaaaatg 37141729  T
Q  687 tgaaaaacacaaagggtgcttacat 711  Q
    |||||||  |||  |||||||||||    
T  37141728 tgaaaaatgcaataggtgcttacat 37141704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 38202980 - 38203120
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||| || | ||| |||||||||||  ||||    
T  38202980 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacatattaattacaccgacaa 38203079  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     |||| ||||||||||||||||| | || |||||| |||||    
T  38203080 cttttattaagaaatgtgaaaaagataacgggtgcctacat 38203120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 571 - 712
Target Start/End: Complemental strand, 40517858 - 40517720
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||||||   |||| || ||||    
T  40517858 cttgtcttgaaatttaaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaacagacacat---ttactctgacaa 40517762  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     ||||||||| ||||||||||||  ||||| | |||||||||    
T  40517761 cttttcttaaaaaatgtgaaaaatgcaaagagggcttacata 40517720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 700
Target Start/End: Original strand, 12998681 - 12998810
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||| |||||||||| |||||||||||||||| |||||||| |||||||| ||||||| ||||  ||||||||||  ||| ||||    
T  12998681 cttgtcttgaaatatgaaaggtcaaatttaatacacatacaaacaaaggacaatttagtaatattcacacacaaaatatgcacattaattgaactgacaa 12998780  T
Q  671 tttttcttaagaaatgtgaaaaacacaaag 700  Q
     |||||||||||||||||||||| ||||||    
T  12998781 cttttcttaagaaatgtgaaaaagacaaag 12998810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 692
Target Start/End: Original strand, 31252643 - 31252763
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||||||   |||| |||||||||||||||| || |||||||||||||||||| | ||    
T  31252643 cttgtcttaaaatatgaaaagtcaaatttaatacacatgcaaacaaatgtttatttcgtaatattaacacacaaaacagacacattaattacactgataa 31252742  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
    ||||| ||||||||||||||||    
T  31252743 ttttt-ttaagaaatgtgaaaa 31252763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 571 - 675
Target Start/End: Complemental strand, 12762960 - 12762856
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| || ||||||    
T  12762960 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaatagacacattaattgcattaacaa 12762861  T
Q  671 ttttt 675  Q
     ||||    
T  12762860 ctttt 12762856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 43191469 - 43191587
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| | ||||||| ||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| || | ||||| ||||    
T  43191469 tcttgaaatatgaaaatttaaatttaatacacatacaaacaaatgacaatttagtaatattaacacataaaatagacacattaactaaattaacattttt 43191568  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    ||||||||||||| |||||    
T  43191569 tcttaagaaatgtaaaaaa 43191587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 885578 - 885458
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||| | |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| || ||||| | |||||||||| ||||     
T  885578 ttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttgataatattaacacaca-aacagacataataattacactgacaac 885480  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||| ||||||||||||    
T  885479 ttttcttaataaatgtgaaaaa 885458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 581 - 702
Target Start/End: Complemental strand, 22590483 - 22590362
Alignment:
Q  581 aatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    ||||| ||||||||||||||  ||  ||||||||||  ||||||||||| ||||||||||| | |||||||||||||||| ||||||||| |||||||||    
T  22590483 aatatgaaaagtcaaatttaacacttatacaaacaatggacaatttggtgatattaacacaaaaaatagacacattaattgcactaacaaattttcttaa 22590384  T
Q  681 gaaatgtgaaaaacacaaaggg 702  Q
    |||||||||||||  |||||||    
T  22590383 gaaatgtgaaaaaagcaaaggg 22590362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 38773336 - 38773477
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||  |||||||||||||||| |||||||| ||||| |||||||||| || ||||||||||||| |||| ||||    
T  38773336 cttgtcttgaaatatgaaaaatcaaatttcatacacatacaaacaaaagacaatttcgtaatgttaacacacaaaacagacacattaattgcactgacaa 38773435  T
Q  671 -tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     ||||| ||||||||||||||||| |||| || ||| |||||    
T  38773436 cttttttttaagaaatgtgaaaaagacaatggttgcctacat 38773477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 594 - 714
Target Start/End: Original strand, 16644047 - 16644167
Alignment:
Q  594 aaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||  ||||||||| |||||  ||||||| || ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  16644047 aaatttaacacacatacagacaaagaacaatttagtgatattaacacacaaaatatacacattaattacactaacaacttttcttaagaaatgtgaaaaa 16644146  T
Q  694 cacaaagggtgcttacataca 714  Q
      ||| | |||||||||||||    
T  16644147 tgcaatgagtgcttacataca 16644167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 575 - 698
Target Start/End: Complemental strand, 7772626 - 7772503
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||| ||||||| |||||||||||| ||| |||||||| |||||||||||||||| || |||||||||||||||| | |||| |||    
T  7772626 tcttgaaatatgaaaagtgaaatttaatacacatacaaataaaggacaatttcgtaatattaacacacaaaacagacacattaattacaatgacaacttt 7772527  T
Q  675 tcttaagaaatgtgaaaaacacaa 698  Q
    |||||| |||||| ||||| ||||    
T  7772526 tcttaaaaaatgtaaaaaagacaa 7772503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 10396218 - 10396338
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||  |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||  || | | |||||||||||| | ||||    
T  10396218 cttgtcttgaaatacgaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacac--aaaacaaacattaattacattgacaa 10396315  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  10396316 cttttcttaataaatgtgaaaaa 10396338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 580 - 690
Target Start/End: Original strand, 3006778 - 3006888
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||||||||||||| |||| |||||||||| | |||||| ||||| |||||||||||||| | |||||||| |||||||| |||||||| ||||||||    
T  3006778 aaatataaaaagtcaattttaatacacatacagataaatgataatttagtaatattaacacataaaatagacatattaattatactaacaacttttctta 3006877  T
Q  680 agaaatgtgaa 690  Q
    |||||| ||||    
T  3006878 agaaatatgaa 3006888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 3113525 - 3113643
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| | ||||||| |||||||| ||||||| ||||||||| ||||||||||||||| || ||||| |||||||||||| | ||||||    
T  3113525 tcttgaaatatgaaaaattaaatttaatacacatataaacaaaagacaatttgataatattaacacacaaaacagacatattaattacactgataatttt 3113624  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    | |||||||||||||||||    
T  3113625 ttttaagaaatgtgaaaaa 3113643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 16002711 - 16002833
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || ||||||||||||||||||||| |||| ||||||||||| || |||||  ||||||||||||||| ||  ||||||||||||||||  ||||    
T  16002711 cttgttttgaaatataaaaagtcaaatttaatacaaatacaaacaaaggataatttcttaatattaacacacaaaactgacacattaattacacagacaa 16002810  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  16002811 cttttcttaaaaaatgtgaaaaa 16002833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 620 - 693
Target Start/End: Original strand, 14522641 - 14522714
Alignment:
Q  620 acaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||    
T  14522641 acaatttggtaatattaacacacaaaacatacacattaattacactaacaatttttcttaagaaatgtgaaaaa 14522714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 571 - 680
Target Start/End: Original strand, 30262526 - 30262635
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||||| | |||||  ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  30262526 cttgtcttgaaatttgaaaagttagatttaagacacatacaaacaaatgacaatttggtaatattaacatacaaaatagacacattaattgcactaacaa 30262625  T
Q  671 tttttcttaa 680  Q
     |||| ||||    
T  30262626 ctttttttaa 30262635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 579 - 712
Target Start/End: Complemental strand, 35794852 - 35794720
Alignment:
Q  579 aaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctt 678  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||| || || ||| |||||||||| ||    
T  35794852 aaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaatacacaaaatagacacaatagttgcacaaacaattttt-tt 35794754  T
Q  679 aagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     |||||||  || || ||||| ||| ||||||||    
T  35794753 gagaaatgcaaataatacaaaaggtacttacata 35794720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 40337179 - 40337319
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||||||||| || | |||||||||||||||| |||||||| |||||||||||| ||| || | |||||||||||| ||| | ||    
T  40337179 cttgtcttgaaatatgaaaagtcaatttaaatacacatacaaacaaaggacaattttgtaatattaacatacaaaacatacacattaattatactgataa 40337278  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     ||||| |||||||||||||||| |||| || ||| |||||    
T  40337279 cttttcataagaaatgtgaaaaagacaatggatgcctacat 40337319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 580 - 712
Target Start/End: Original strand, 40602038 - 40602170
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||| ||||||||| |||||||||||||||| || ||||| |||||||||||||| | |  ||||||||||||| |||||| || |||||| |    
T  40602038 aaatatgaaaaatcaaatttaatacacatacaaacaaaggataatttagtaatattaacacataaataagacacattaattgcactaataacttttctga 40602137  T
Q  680 agaaatgtgaaaaacacaaagggtgcttacata 712  Q
    | ||||||||||||  ||||||| |||||||||    
T  40602138 aaaaatgtgaaaaaagcaaagggggcttacata 40602170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 590 - 693
Target Start/End: Complemental strand, 31673695 - 31673593
Alignment:
Q  590 agtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtga 689  Q
    ||||||||||| |||||||||||||||| || |||||||||||||||||| ||| |||| |||||||||||||||  |||| ||||||||| ||||||||    
T  31673695 agtcaaatttaatacacatacaaacaaaggataatttggtaatattaacatacaaaataaacacattaattacac-cacaacttttcttaaaaaatgtga 31673597  T
Q  690 aaaa 693  Q
    ||||    
T  31673596 aaaa 31673593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 572 - 655
Target Start/End: Complemental strand, 34158034 - 34157951
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacat 655  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| | |||||||||||    
T  34158034 ttgtcttaaaatacaaaaagccaaatttaatacacatacaaacaaatgacaatttagtaatattaacacataaaatagacacat 34157951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 39543648 - 39543773
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttgg---taatattaacacacagaatagacacattaattacactaa 667  Q
    |||||||| | |||| |||||||||||||| |||||||||||||||| ||||||||||   |||||||||| |||| || |||||||||||||||||  |    
T  39543648 cttgtcttgagatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttggtaataatattaacgcacaaaacagacacattaattacacgga 39543747  T
Q  668 caatttttcttaagaaatgtgaaaaa 693  Q
    |||  ||||||||||||| |||||||    
T  39543748 caacatttcttaagaaatatgaaaaa 39543773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 571 - 698
Target Start/End: Original strand, 45185255 - 45185382
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||| | |||||||||| | | |||||||||||||||| ||||||||| ||||||||| ||| | || ||||||||| ||||||   ||||    
T  45185255 cttgtcttaaaatttgaaaagtcaaaatgaatacacatacaaacaaaggacaatttgataatattaatacataaaacagacacatttattacaacgacaa 45185354  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     |||||||||||||||||||||| ||||    
T  45185355 cttttcttaagaaatgtgaaaaatacaa 45185382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 37600876 - 37600998
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| || ||||||| | |||||||||| | |  |||||||||||||| ||| ||||    
T  37600876 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattaattatacttacaa 37600975  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      |||||||| ||||||||||||    
T  37600976 catttcttaaaaaatgtgaaaaa 37600998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 1177144 - 1177265
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||| ||||||||| |||||||||||| ||| |||||||| |||||||||| | ||| || |||||||||||||||||| | ||    
T  1177144 cttgttttgaaatatgaaaaatcaaatttaatacacatacaaataaaagacaatttcgtaatattaatatacaaaacagacacattaattacact-ataa 1177242  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  1177243 cttttcttaaaaaatgtgaaaaa 1177265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 1769436 - 1769557
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||| ||     |||||||||||||| | ||    
T  1769436 cttgtcttgaaatataaaaagtcaaatttaat-cacatacaaacaaatgacaatgtggtaatattaacatacaaaaggagtacattaattacactgataa 1769534  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      |||||||| ||||||||||||    
T  1769535 catttcttaaaaaatgtgaaaaa 1769557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 581 - 685
Target Start/End: Complemental strand, 27673 - 27569
Alignment:
Q  581 aatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    |||||||||| ||||||||| |||| | | |||||||||||||||| |||| ||| ||||| | ||||||| |||| || ||||||||||||||||||||    
T  27673 aatataaaaaatcaaatttaatacatacataaacaaatgacaatttagtaacattcacacataaaatagacgcattcataacactaacaatttttcttaa 27574  T
Q  681 gaaat 685  Q
    |||||    
T  27573 gaaat 27569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 580 - 688
Target Start/End: Complemental strand, 34869939 - 34869831
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||  | |||| | ||||||||||||||||| ||||||||| ||||| |||| |||||||| ||||||  |||||||||||||    
T  34869939 aaatatgaaaagtcaaattttatgcacagataaacaaatgacaatttgataatattaatacacaaaatatacacattagttacaccgacaatttttctta 34869840  T
Q  680 agaaatgtg 688  Q
    | |||||||    
T  34869839 aaaaatgtg 34869831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 571 - 687
Target Start/End: Original strand, 45183849 - 45183965
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| | || | ||| ||| |||||  | ||||    
T  45183849 cttgtcttcaaatttgaaaagtcaaatttaatacacatataaacaaaggacaatttggtaatattaacacataaaacaaacatatttattactatgacaa 45183948  T
Q  671 tttttcttaagaaatgt 687  Q
     ||||||||||||||||    
T  45183949 cttttcttaagaaatgt 45183965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 571 - 685
Target Start/End: Complemental strand, 14739547 - 14739433
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| || ||||| ||||| |||||| ||||||||| || |||||||||||||||||| | | |||| |||||||||||||||  ||||    
T  14739547 cttgtcttgaaatatgaatagtcacatttaatacacacacaaacaaaggataatttggtaatattaacatataaaataaacacattaattacacggacaa 14739448  T
Q  671 tttttcttaagaaat 685  Q
     ||||||||| ||||    
T  14739447 cttttcttaaaaaat 14739433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 579 - 688
Target Start/End: Complemental strand, 41541657 - 41541550
Alignment:
Q  579 aaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctt 678  Q
    ||||||| |||||||||||||| |||| |||  || ||| ||||||||| ||||||| ||||||| ||||||||||||| ||  |||||| |||||||||    
T  41541657 aaaatatgaaaagtcaaatttaatacatata--aataaaggacaatttgataatattgacacacaaaatagacacattagttgtactaactatttttctt 41541560  T
Q  679 aagaaatgtg 688  Q
    ||||||||||    
T  41541559 aagaaatgtg 41541550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 607 - 693
Target Start/End: Complemental strand, 14906683 - 14906597
Alignment:
Q  607 atacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||| || |||||||||||||||||||||| |||||||| |||||||||| ||| || |||| | || ||||||||||||    
T  14906683 atacaaacaaaggataatttggtaatattaacacacaaaatagacatattaattacattaataacttttatgaaaaaatgtgaaaaa 14906597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 580 - 641
Target Start/End: Original strand, 23399774 - 23399835
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacaca 641  Q
    |||||| |||||||||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  23399774 aaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacaca 23399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 630 - 698
Target Start/End: Original strand, 4273955 - 4274023
Alignment:
Q  630 aatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaa 698  Q
    |||||||||||| | || | |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  4273955 aatattaacacataaaacaaacacattaattacactaacaatatttcttaagaaatgtgaaaaagacaa 4274023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 575 - 690
Target Start/End: Original strand, 12894196 - 12894312
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||| | | |||| |||||||||||||||||| ||||||||||  || ||| |||||||||||||||  ||| || || |||    
T  12894196 tcttgaaatatgaaaagtcaaactaaatacaaatacaaacaaatgacaatatggtaatatttccatacaaaatagacacattaatcgcacaaaaaacttt 12894295  T
Q  675 tc-ttaagaaatgtgaa 690  Q
    || ||||||||||||||    
T  12894296 tctttaagaaatgtgaa 12894312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 628 - 712
Target Start/End: Original strand, 45283827 - 45283910
Alignment:
Q  628 gtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    |||||||||||||| | || |||||||||||||||| | | ||||||||||||||||| ||||||| ||||| || |||||||||    
T  45283827 gtaatattaacacataaaacagacacattaattacattgataatttttcttaagaaatttgaaaaa-acaaaaggggcttacata 45283910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 35709091 - 35709181
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacact 665  Q
    |||||| |||| |||||||||||||| |||||| | | || || ||||||||| ||||||||||||| | | |||||||||||| ||||||    
T  35709091 tcttaacatatgaaaagtcaaatttaatacacacatatacgaaagacaatttgataatattaacacataaactagacacattaactacact 35709181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 641
Target Start/End: Complemental strand, 23280759 - 23280699
Alignment:
Q  581 aatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacaca 641  Q
    ||||| |||| ||||||||| || ||||||||||||| |||||||| ||||||||||||||    
T  23280759 aatatgaaaaatcaaatttaataaacatacaaacaaaggacaatttagtaatattaacaca 23280699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 36933722 - 36933686
Alignment:
Q  240 ggttaatcacgtgcaaaaatatgtttaattcagttga 276  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36933722 ggttaatcacatgcaaaaatatgtttaattcagttga 36933686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 620 - 658
Target Start/End: Complemental strand, 27194099 - 27194061
Alignment:
Q  620 acaatttggtaatattaacacacagaatagacacattaa 658  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  27194099 acaatttggtaatattaacacacaaaataaacacattaa 27194061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 2e-45; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 575 - 712
Target Start/End: Original strand, 13723468 - 13723605
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| || |||||||||||||||| ||||| |||||||||||||||| ||||||||| |||    
T  13723468 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttggtaatattaatacacaaaatagacacattaattgcactaacaacttt 13723567  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    |||||||||||||||||||  |||||||||||||||||    
T  13723568 tcttaagaaatgtgaaaaatgcaaagggtgcttacata 13723605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 32152271 - 32152153
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||    
T  32152271 tcttaaaatatgaaaagtcaaatttaatacacatacaaacaaataacaatttggtaatattaacacacaaaatagacacattaattgcaccaacaacttt 32152172  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  32152171 tcttaagaaatgtgaaaaa 32152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 575 - 712
Target Start/End: Original strand, 8984651 - 8984788
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||    
T  8984651 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttagtaatattaacacacaaaacagacacattaattacactaacaatttt 8984750  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     ||||| ||||||||||||  ||||||  |||||||||    
T  8984751 ccttaaaaaatgtgaaaaatgcaaaggaggcttacata 8984788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 572 - 712
Target Start/End: Original strand, 15512768 - 15512908
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | |||||||||||||| |||||||||||     
T  15512768 ttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaac 15512867  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    ||||||||||||||||||||||  ||||||| | |||||||    
T  15512868 ttttcttaagaaatgtgaaaaaagcaaaggggggttacata 15512908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 572 - 712
Target Start/End: Original strand, 28948951 - 28949091
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | |||||||||||||| |||||||||||     
T  28948951 ttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaac 28949050  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    ||||||||||||||||||||||  ||||||| | |||||||    
T  28949051 ttttcttaagaaatgtgaaaaaagcaaaggggggttacata 28949091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 38680592 - 38680470
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || ||||||  |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  38680592 cttgttttgaaatatgcaaagacaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaa 38680493  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  38680492 cttttcttaagaaatgtgaaaaa 38680470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 571 - 708
Target Start/End: Complemental strand, 32144428 - 32144291
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||| |||||    
T  32144428 cttgtcttaaaatatgaaaagtcaaattttatacacatacaaacaaatgacaatttggtaatattaacgcacaaaatagacacattaaatgcaccaacaa 32144329  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgctta 708  Q
     |||||||||||||||| |||||  |||| ||||||||    
T  32144328 cttttcttaagaaatgtaaaaaatgcaaaaggtgctta 32144291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 47754637 - 47754750
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||    
T  47754637 aaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaaatagacacattaattgcactaacaatttttttta 47754736  T
Q  680 agaaatgtgaaaaa 693  Q
    |||||||| |||||    
T  47754737 agaaatgtaaaaaa 47754750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 52141161 - 52141285
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagaca--cattaattacactaac 668  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||||| ||||||||  |||||||||||||||     
T  52141161 cttgtcttaaaatataaaaagtcaaatttaatacacatacaaacaaaagataatttgataatattaacacacaaaatagacacgcattaattacactaat 52141260  T
Q  669 aatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||| ||||||||||||    
T  52141261 aatttttcttaaaaaatgtgaaaaa 52141285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 571 - 702
Target Start/End: Complemental strand, 2343021 - 2342890
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| ||| |||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  2343021 cttgccttgaaatatgaaaagtcaaatttaatacacacacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaagtaaactaacaa 2342922  T
Q  671 tttttcttaagaaatgtgaaaaacacaaaggg 702  Q
    |||||||||| ||||||||||||  |||||||    
T  2342921 tttttcttaaaaaatgtgaaaaaagcaaaggg 2342890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 16582650 - 16582523
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  16582650 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaagacaatttcgtaatattaacacacaaaacagacacattaattacactgacaa 16582551  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     |||||||||||||||||||||| ||||    
T  16582550 cttttcttaagaaatgtgaaaaagacaa 16582523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 48721854 - 48721976
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| || |||||||||||||||||| |||     
T  48721854 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacag 48721953  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  48721954 cttttcttaagaaatgtgaaaaa 48721976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 575 - 711
Target Start/End: Original strand, 5085079 - 5085215
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| || |||||||||||||||||| |||| |||    
T  5085079 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttt 5085178  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    |||||| ||||||||||||  ||| |||||| |||||    
T  5085179 tcttaaaaaatgtgaaaaaggcaatgggtgcctacat 5085215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 571 - 688
Target Start/End: Original strand, 28723637 - 28723756
Alignment:
Q  571 cttgtcttaaaatata--aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaac 668  Q
    |||||||| |||||||  |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||    
T  28723637 cttgtcttgaaatatatgaaaagtcaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaatagacacattaattacactaac 28723736  T
Q  669 aatttttcttaagaaatgtg 688  Q
    || ||||||||| |||||||    
T  28723737 aacttttcttaaaaaatgtg 28723756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 575 - 714
Target Start/End: Original strand, 30898553 - 30898692
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    ||||||||||| || ||||| ||||| |||||||||||||||| || |||||||||||||||||||| | || |||||||||||||||||| ||||||||    
T  30898553 tcttaaaatatgaatagtcacatttaatacacatacaaacaaaggataatttggtaatattaacacataaaacagacacattaattacactgacaatttt 30898652  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    |||||||||||||||||||  |||| || | |||||||||    
T  30898653 tcttaagaaatgtgaaaaaagcaaaaggagtttacataca 30898692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 8877885 - 8877767
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || | |||||||||||| ||| ||||||||    
T  8877885 tcttgaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacacattaattatactgacaatttt 8877786  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||| |||| |||||||    
T  8877785 tcttaaaaaatatgaaaaa 8877767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 15179527 - 15179405
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||  |||||||||||||| |||||||||||||||| |||||||| |||||||| || || | ||||||||||||||||||||| ||||    
T  15179527 cttgtcttgaaatacgaaaagtcaaatttaatacacatacaaacaaaggacaattttgtaatatttacgcataaaatagacacattaattacactgacaa 15179428  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||||    
T  15179427 tttttcttaagaaatgtgaaaaa 15179405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 31305431 - 31305313
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| || ||| |||||||||||||||||||| ||||| |||    
T  31305431 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattagcatacaaaatagacacattaattacaccaacaacttt 31305332  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||| ||||||||||||    
T  31305331 tcttaataaatgtgaaaaa 31305313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 711
Target Start/End: Complemental strand, 32047558 - 32047419
Alignment:
Q  571 cttgtcttaaaatat-aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaaca 669  Q
    |||||||| |||||| |||||||||||||||  |||||||||||||||||||||||| |||||||||||||||| || | |||||||||||||||| |||    
T  32047558 cttgtcttgaaatatgaaaaagtcaaattta--acacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacacattaattacactgaca 32047461  T
Q  670 atttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    | ||||||||||||||||||||||  ||| |||||| |||||    
T  32047460 acttttcttaagaaatgtgaaaaaagcaatgggtgcctacat 32047419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 33231957 - 33231835
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  33231957 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaa 33231858  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| |||||||||||||||||    
T  33231857 ctttttttaagaaatgtgaaaaa 33231835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 35365970 - 35366092
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| |||||| |||||| ||||||||||||    
T  35365970 cttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaatagatacattacttacactaacaa 35366069  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||  |||||||| |||||||    
T  35366070 cttttagtaagaaatatgaaaaa 35366092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 575 - 712
Target Start/End: Original strand, 23982582 - 23982719
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||| | |||| |||    
T  23982582 tcttgaaatatgaaaagtcaaatttaatacatatacaaacaaatgtcaatttgataatattaacacacaaaacagacacattaattacattgacaacttt 23982681  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    |||||||||||||||||||  |||||||  ||||||||    
T  23982682 tcttaagaaatgtgaaaaatgcaaaggggacttacata 23982719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 571 - 711
Target Start/End: Complemental strand, 3143520 - 3143380
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||| |  |||||||||||||||| | ||||    
T  3143520 cttgtcttgaaatatgaaaagtcaaatttaatacacataaaaacaaaagacaattttgtaatattaacacacaaagcagacacattaattacaatgacaa 3143421  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     ||||||||||||||||||||||  ||| |||||| |||||    
T  3143420 cttttcttaagaaatgtgaaaaaagcaatgggtgcctacat 3143380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 571 - 708
Target Start/End: Original strand, 51390523 - 51390658
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||| || ||||||    
T  51390523 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaa---taacacacaaaatagacacattaattgcattaacaa 51390619  T
Q  671 tttttc-ttaagaaatgtgaaaaacacaaagggtgctta 708  Q
    || ||| |||||||||||||||||  |||| ||||||||    
T  51390620 ttcttctttaagaaatgtgaaaaattcaaaaggtgctta 51390658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 571 - 714
Target Start/End: Complemental strand, 20564892 - 20564749
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| ||||||| |||||||| |||||||| |||||||||||||| | | ||||||||||| |||||||| |||    
T  20564892 cttgtcttgaaatatgaaaagtcaaatttaatacacattcaaacaaaagacaattttgtaatattaacacataaagtagacacattagttacactatcaa 20564793  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
     ||||||||| ||||||||||||  |||| | ||||||||||||    
T  20564792 cttttcttaacaaatgtgaaaaatgcaaaagatgcttacataca 20564749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 29140640 - 29140762
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||| ||||| || |||||||||||||||||   |||    
T  29140640 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattttgtaatattaatacacaaaacagacacattaattacaccggcaa 29140739  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  29140740 cttttcttaagaaatgtgaaaaa 29140762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 4813457 - 4813570
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| ||||||||||||||  |||||||||||||||  | |||||||||||||||||||||| |||||||||||||||| || |||||| ||||||||    
T  4813457 aaatatgaaaagtcaaatttaacacacatacaaacaaagaataatttggtaatattaacacacaaaatagacacattaattgcattaacaacttttctta 4813556  T
Q  680 agaaatgtgaaaaa 693  Q
    ||||||||||||||    
T  4813557 agaaatgtgaaaaa 4813570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 571 - 688
Target Start/End: Original strand, 15911538 - 15911655
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||| |||| ||||| ||||||||||||||||||   ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  15911538 cttgtcttgaaatatgaaatgtcacatttaatacacatacaaacaaatggttatttggtaatattaacacacaaaatagacacattaagtacactaacaa 15911637  T
Q  671 tttttcttaagaaatgtg 688  Q
     |||||||||||||||||    
T  15911638 cttttcttaagaaatgtg 15911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 572 - 706
Target Start/End: Complemental strand, 24415116 - 24414982
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||||||||  |||||    
T  24415116 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttggtaatattaacacacaaaagagatacattaattacaccgacaat 24415017  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgct 706  Q
     || ||||| |||||| |||||  |||| ||||||    
T  24415016 attacttaataaatgtaaaaaaggcaaaaggtgct 24414982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 30336172 - 30336054
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| ||||||||  ||| |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||    
T  30336172 tcttgaaatatgaaaattcaaattttatacgcatagaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattacaccgacaacttt 30336073  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  30336072 tcttaagaaatgtgaaaaa 30336054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 692
Target Start/End: Original strand, 31807958 - 31808079
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||  ||| |||||||||  ||||||| |||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31807958 cttgtcttgaaataggaaatgtcaaatttgatacacatgcaaacaaaagataatttggtaatattaacacacaaaatagacacattaattacactaacaa 31808057  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
     |||||| ||||| ||||||||    
T  31808058 cttttctcaagaagtgtgaaaa 31808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 572 - 693
Target Start/End: Original strand, 34696870 - 34696991
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||  |||||||||||||  | ||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||||||| ||||     
T  34696870 ttgtcttgaaataggaaaagtcaaatttcatgcacatacaaacaaatgacaatttcgtaatattaacacacaaaacagacatattaattacactgacaac 34696969  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||| ||||||||||||    
T  34696970 ttttcttaaaaaatgtgaaaaa 34696991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 668
Target Start/End: Original strand, 47070947 - 47071044
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaac 668  Q
    |||||||| |||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  47070947 cttgtcttgaaatatgaaaaatcaaatttaatacgcatacaaacaaatgacaatttggtaatattaacacataaaatagacacattaattacactaac 47071044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 571 - 692
Target Start/End: Original strand, 44652847 - 44652965
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||||||||||||| ||||||||||||||||  ||||| |||||||||||| ||||| || ||||||||||||||||||||||     
T  44652847 cttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaagaacaatgtggtaatattaaaacacaaaacagacacattaattacactaaca- 44652945  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
      ||||||||||||||||||||    
T  44652946 --tttcttaagaaatgtgaaaa 44652965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 587 - 718
Target Start/End: Complemental strand, 46495410 - 46495279
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||||||||||||| || ||||||||| ||| ||||||||| ||||||||||||||| || |||||||||||||||||| ||||||||| || | |||||    
T  46495410 aaaagtcaaatttaatatacatacaaataaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaatttttttttaaaaatg 46495311  T
Q  687 tgaaaaacacaaagggtgcttacatacatgga 718  Q
    ||||||| |||||||  | ||||||| |||||    
T  46495310 tgaaaaaaacaaaggaggtttacatatatgga 46495279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 580 - 698
Target Start/End: Complemental strand, 25269485 - 25269367
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| |||||||||||||||| || ||||| |||||||||||||| | || |||||||||| ||||||| |||| ||||||||    
T  25269485 aaatatgaaaagtcaaatttaatacacatacaaacaaaggaaaatttcgtaatattaacacataaaacagacacattatttacactgacaacttttctta 25269386  T
Q  680 agaaatgtgaaaaacacaa 698  Q
    | |||||||||||| ||||    
T  25269385 aaaaatgtgaaaaagacaa 25269367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 602 - 712
Target Start/End: Complemental strand, 44335375 - 44335266
Alignment:
Q  602 tacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagg 701  Q
    ||||| |||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||| |||| ||||||||||||||||| |||||||    
T  44335375 tacacgtacaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttattaagaaatgtgaaaaa-acaaagg 44335277  T
Q  702 gtgcttacata 712  Q
    | | |||||||    
T  44335276 gggtttacata 44335266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 592 - 689
Target Start/End: Complemental strand, 41737221 - 41737124
Alignment:
Q  592 tcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtga 689  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||| |||||||||||| |||||    
T  41737221 tcaaatttaaaacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaagaagtgtga 41737124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 571 - 702
Target Start/End: Original strand, 4817892 - 4818021
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||  || | ||||| |||||||||  ||||    
T  4817892 cttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaatacac--aaaacacacaataattacaccgacaa 4817989  T
Q  671 tttttcttaagaaatgtgaaaaacacaaaggg 702  Q
     |||||||||||||||||||||| ||||||||    
T  4817990 cttttcttaagaaatgtgaaaaaaacaaaggg 4818021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 571 - 702
Target Start/End: Original strand, 4829692 - 4829821
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||  || | ||||| |||||||||  ||||    
T  4829692 cttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaatacac--aaaacacacaataattacaccgacaa 4829789  T
Q  671 tttttcttaagaaatgtgaaaaacacaaaggg 702  Q
     |||||||||||||||||||||| ||||||||    
T  4829790 cttttcttaagaaatgtgaaaaaaacaaaggg 4829821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 10842440 - 10842324
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| ||||||||||||||  ||||||||||||||| || ||||||||||||||||  |||| |||||||| ||||||| || |||||| |||    
T  10842440 tcttgaaatatgaaaagtcaaatttaacacacatacaaacaaacgataatttggtaatattaa--cacaaaatagacatattaattgcattaacaacttt 10842343  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  10842342 tcttaagaaatgtgaaaaa 10842324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 586 - 693
Target Start/End: Complemental strand, 25258432 - 25258325
Alignment:
Q  586 aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaat 685  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||||||| || ||| | |||||||||||||||| ||||||||| ||||||||| ||||    
T  25258432 aaaaagttaaatttaatacacatacaaacaaaggacaatttggtaatatcaagacataaaatagacacattaattgcactaacaacttttcttaaaaaat 25258333  T
Q  686 gtgaaaaa 693  Q
     |||||||    
T  25258332 atgaaaaa 25258325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 575 - 714
Target Start/End: Original strand, 28679812 - 28679949
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||| ||||||||| ||||||||||||||||  |||||||  ||||||||||||||| |||||||||||||||| || |||||| |||    
T  28679812 tcttgaaatattaaaaatcaaatttaatacacatacaaacaaaa-acaatttaataatattaacacacaaaatagacacattaattgcattaacaacttt 28679910  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    | |||| |||||||||||| ||||||| |||||| |||||    
T  28679911 ttttaa-aaatgtgaaaaatacaaaggatgcttatataca 28679949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 47643657 - 47643537
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||||||||||||| ||||||| |||||||| |||||||| ||||||||||  |||| || | |||||||||||||||| ||||    
T  47643657 cttgtcttgaaatttgaaaagtcaaatttaatacacatgcaaacaaaggacaatttagtaatattaa--cacaaaacatacacattaattacactgacaa 47643560  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  47643559 cttttcttaagaaatgtgaaaaa 47643537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 34102453 - 34102331
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| || |||||||||||||  | |||||| ||||||||||||||| || |||||||||||||||| | | ||    
T  34102453 cttgtcttgaaatatgaaaagtcaaatttaataaacatacaaacaaagaataatttgataatattaacacacaaaacagacacattaattacaatgaaaa 34102354  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    |||||||||| |||| |||||||    
T  34102353 tttttcttaaaaaatttgaaaaa 34102331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 603 - 692
Target Start/End: Complemental strand, 50692494 - 50692405
Alignment:
Q  603 acacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaa 692  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||| || | |||| |||||||||||||||||||||    
T  50692494 acacatacaaacaaaggacaatttggtaatactaacacacaaaatagacacattaattgcattgacaacttttcttaagaaatgtgaaaa 50692405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 572 - 691
Target Start/End: Complemental strand, 40261709 - 40261592
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||||||||||||||||||| |||| |||  |||||| | ||||||| ||||||||||||||| |||| ||||||||||| ||||||| |     
T  40261709 ttgtcttgaaatataaaaagtcaaatttaatacatata--aacaaagggcaatttgataatattaacacacaaaataaacacattaattgcactaactac 40261612  T
Q  672 ttttcttaagaaatgtgaaa 691  Q
    ||||| ||||||||||||||    
T  40261611 ttttcataagaaatgtgaaa 40261592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 573 - 705
Target Start/End: Complemental strand, 44395650 - 44395518
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    |||||| |||||| |||| ||||||||| || ||||||||||||| || ||||| |||||||||||||| | |||| ||| |||||||||||| ||||      
T  44395650 tgtcttgaaatatgaaaaatcaaatttaatatacatacaaacaaaggataattttgtaatattaacacataaaataaacatattaattacactgacaaca 44395551  T
Q  673 tttcttaagaaatgtgaaaaacacaaagggtgc 705  Q
    ||||||||||||||||||||  |||| ||||||    
T  44395550 tttcttaagaaatgtgaaaaggacaatgggtgc 44395518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 3831164 - 3831044
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||||||||||||||  | |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||   ||| | ||    
T  3831164 cttgtcttgaaatatgaaaagtcaaatttaacatacatacaaacaaatgacaatttcgtaatattaacacacaaaatagatacattaat--aactgataa 3831067  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  3831066 cttttcttaaaaaatgtgaaaaa 3831044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 580 - 711
Target Start/End: Original strand, 9675662 - 9675793
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| || ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| |  ||||| |||||||||||| |||| ||||||||    
T  9675662 aaatatgaatagtcaaatttaatacacatacaaataaaggacaatttcgtaatattaacacacaaatcagacaaattaattacactgacaacttttctta 9675761  T
Q  680 agaaatgtgaaaaacacaaagggtgcttacat 711  Q
    ||||| || |||||  ||| |||||| |||||    
T  9675762 agaaacgtaaaaaagtcaatgggtgcctacat 9675793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 36085087 - 36084960
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||  |||||| |||||| ||||||| |||||||||||| ||| || |||||  ||||||||||||||| || ||| |||||||||||||| | ||    
T  36085087 cttgtctcgaaatatgaaaagttaaatttaatacacatacaaataaaggataatttcttaatattaacacacaaaacagatacattaattacactgataa 36084988  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
    |||||||||| |||||||||||| ||||    
T  36084987 tttttcttaaaaaatgtgaaaaagacaa 36084960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 5322009 - 5322131
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||||||||| |||| |||| |||||||||||| ||||||| ||||||| |||||||| || |||||||||||||||| | | ||    
T  5322009 cttgtcttgaaatatgaaaagtcaattttaatacatatacaaacaaataacaatttcgtaatataaacacacaaaacagacacattaattacattgataa 5322108  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| |||| |||||||    
T  5322109 cttttcttaaaaaatatgaaaaa 5322131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 587 - 685
Target Start/End: Complemental strand, 51997056 - 51996958
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaat 685  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| | || | ||| |||||||||||| |||| ||||||||||||||    
T  51997056 aaaagtcaaatttaatacacatacaaacaaaggacgatttggtaatattaacacagaaaacatacaaattaattacactgacaacttttcttaagaaat 51996958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 575 - 654
Target Start/End: Original strand, 291625 - 291704
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacaca 654  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  291625 tcttaaaatataaaaagttaaatttaatacaaatacaaacaaatgacaatttagtaatattaacatacaaaatagacaca 291704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 602 - 693
Target Start/End: Complemental strand, 44163318 - 44163227
Alignment:
Q  602 tacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||||||  ||||||||||||||| || | |||||||||||||||| | || |||| |||||||||||||||||    
T  44163318 tacacatacaaacaaatgacaatttaataatattaacacacaaaacaaacacattaattacactgataactttttttaagaaatgtgaaaaa 44163227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 571 - 704
Target Start/End: Original strand, 3143722 - 3143853
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| | | ||||| || ||||||||||||| ||||||||| ||||| ||||||| |  ||||||||||||||||||||| |||    
T  3143722 cttgtcttgaaatatgaaaaataatatttaataaacatacaaacaaaagacaatttgataataataacacaaa--atagacacattaattacactatcaa 3143819  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtg 704  Q
     ||||||||||| || ||||||| ||||| ||||    
T  3143820 cttttcttaagacatatgaaaaatacaaaaggtg 3143853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 571 - 685
Target Start/End: Complemental strand, 25063327 - 25063213
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||| | |||||| |||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||| || |||||||||| || || ||| ||    
T  25063327 cttgtcgtgaaatatgaaaagtgaaatttaatacacatacaaacaaaggacaattaggtaatattaacacacaaaacagacacattatttgcattaataa 25063228  T
Q  671 tttttcttaagaaat 685  Q
     ||||||||| ||||    
T  25063227 cttttcttaaaaaat 25063213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 571 - 704
Target Start/End: Original strand, 28334207 - 28334334
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| |||||||||| |||| ||||||||| |||||||| || |||| |||||||| ||||      |||||| || |||||||||||||||||| ||||    
T  28334207 cttgccttaaaatatgaaaattcaaatttaatacacatataagcaaaggacaatttcgtaa------cacacaaaacagacacattaattacactgacaa 28334300  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtg 704  Q
     |||||||||||||||||||||| |||| |||||    
T  28334301 cttttcttaagaaatgtgaaaaagacaatgggtg 28334334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 580 - 693
Target Start/End: Original strand, 15457810 - 15457923
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||| |||| | | ||||| |  |||||||| |||| |||    
T  15457810 aaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttgataatattatcacacaaaataaatatattaactgtactaacaacttttttta 15457909  T
Q  680 agaaatgtgaaaaa 693  Q
    |||||| |||||||    
T  15457910 agaaatatgaaaaa 15457923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 605 - 714
Target Start/End: Complemental strand, 27531182 - 27531073
Alignment:
Q  605 acatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagggtg 704  Q
    |||||||||||||  ||||||  |||||||||||||||| || | |||||||||||| ||| |||| ||||||||||||||||||||||  |||||||      
T  27531182 acatacaaacaaagaacaattaagtaatattaacacacaaaacaaacacattaattatactgacaacttttcttaagaaatgtgaaaaatgcaaagggaa 27531083  T
Q  705 cttacataca 714  Q
    ||||||||||    
T  27531082 cttacataca 27531073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 588 - 705
Target Start/End: Original strand, 35001273 - 35001390
Alignment:
Q  588 aaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgt 687  Q
    ||||| ||||||| |||||||||||||||| ||||||||  ||| ||||||||||| || |||||  || |||||||| |||| ||||||||| ||||||    
T  35001273 aaagttaaatttaatacacatacaaacaaaggacaatttcataacattaacacacaaaacagacattttgattacactgacaacttttcttaataaatgt 35001372  T
Q  688 gaaaaacacaaagggtgc 705  Q
    |||||| |||| ||||||    
T  35001373 gaaaaagacaatgggtgc 35001390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 571 - 680
Target Start/End: Complemental strand, 46591219 - 46591110
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||| ||||||||| |||||||| ||||||| ||||||| | ||||||||||||||| || | |||||||||||||||| ||||    
T  46591219 cttgtcttgaaatttgaaaaatcaaatttaatacacatagaaacaaaggacaattcgataatattaacacacaaaacaaacacattaattacactcacaa 46591120  T
Q  671 tttttcttaa 680  Q
     |||||||||    
T  46591119 cttttcttaa 46591110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 609 - 693
Target Start/End: Original strand, 47133463 - 47133548
Alignment:
Q  609 acaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa-tttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||  ||||||||||||||| |||| |||||||||||||| |||||| ||||| |||||||||||||||||    
T  47133463 acaaacaaatgacaatttaataatattaacacacaaaataaacacattaattacattaacaatttttttttaagaaatgtgaaaaa 47133548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 571 - 683
Target Start/End: Complemental strand, 4082043 - 4081931
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| |||||||||| |||||||| ||||| |||||||||||| ||| | || ||||||||||| || ||| ||    
T  4082043 cttgtctttaaatatgaaaaatcaaatttaatacacatacagacaaatgataatttagtaatattaacatacaaactaaacacattaattgcattaataa 4081944  T
Q  671 tttttcttaagaa 683  Q
     ||||||||||||    
T  4081943 cttttcttaagaa 4081931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 580 - 664
Target Start/End: Original strand, 16395543 - 16395627
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacac 664  Q
    |||||| |||||||||||||   ||||||||||||||| || |||||||||||||||||| ||| ||||||||||||||||||||    
T  16395543 aaatatgaaaagtcaaattttacacacatacaaacaaaagataatttggtaatattaacatacaaaatagacacattaattacac 16395627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 575 - 658
Target Start/End: Complemental strand, 13145531 - 13145448
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaa 658  Q
    ||||||||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||| || ||||| |||||    
T  13145531 tcttaaaatatgaaaagtcaaatttaatgcacatacaaacaaaggacaatttggtaatattaacatacaaaacagacatattaa 13145448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 23393501 - 23393620
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| || ||||||||  | |||||||||||||||||||||||||  ||| ||||| ||||| |||||| |||||||||||| ||||||    
T  23393501 cttgtcttgaaatatgaatagtcaaat--aatacacatacaaacaaatgacaatttaataa-attaatacacaaaatagatacattaattacattaacaa 23393597  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| |||| |||||||    
T  23393598 cttttcttaaaaaatatgaaaaa 23393620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 571 - 680
Target Start/End: Complemental strand, 3072254 - 3072147
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||| ||| |||  |||||||  ||||||||||||| | |||| ||||||||||| |||||||||    
T  3072254 cttgtcttgaaatatgaaaagtcaaatttaatacacataaaaaaaaa--acaatttaataatattaacacataaaataaacacattaattgcactaacaa 3072157  T
Q  671 tttttcttaa 680  Q
     |||||||||    
T  3072156 cttttcttaa 3072147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 10160825 - 10160714
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||  ||||  |||||||||| |       |||||||||||||||||| | || |||    
T  10160825 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgaatatttcataatattaacgc-------agacacattaattacactgataacttt 10160733  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||    
T  10160732 tcttaagaaatgtgaaaaa 10160714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 602 - 693
Target Start/End: Complemental strand, 6282560 - 6282469
Alignment:
Q  602 tacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||| ||| ||||||| ||||||||  ||||||||||||| | ||||||||||||||||  ||||||||||||||||| |||| ||||||||    
T  6282560 tacatatataaacaaaggacaattttataatattaacacataaaatagacacattaattgtactaacaatttttcttatgaaacgtgaaaaa 6282469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 34331988 - 34331871
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||| ||||||| || ||||  ||| || | ||||||| ||||||||||||| ||  ||||||||||||    
T  34331988 tcttgaaatatgaaaagtcaaatttaatacacatataaacaaaagataattcagtactactcacacacaaaatagacacattagttgtactaacaatttt 34331889  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    | |||| ||||||||||||    
T  34331888 ttttaa-aaatgtgaaaaa 34331871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 605 - 690
Target Start/End: Complemental strand, 13352917 - 13352832
Alignment:
Q  605 acatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaa 690  Q
    ||||||||| ||||||||||||| ||||||||||||| | || |||||||||||||  |||||| |  ||||||||||||||||||    
T  13352917 acatacaaataaatgacaatttgctaatattaacacataaaacagacacattaattgaactaactacatttcttaagaaatgtgaa 13352832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 608 - 684
Target Start/End: Complemental strand, 13698670 - 13698592
Alignment:
Q  608 tacaaacaaatgacaatttg--gtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaa 684  Q
    |||||||||||||||||||   ||||||||||||| || |||| ||| ||||||||||||||||| |||||||||||||    
T  13698670 tacaaacaaatgacaatttttagtaatattaacacgcaaaataaacatattaattacactaacaacttttcttaagaaa 13698592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 576 - 670
Target Start/End: Original strand, 43414780 - 43414874
Alignment:
Q  576 cttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||||| |||| | ||||||||||||||||||||||||  ||| | | |||||||||||| ||| |||| ||||||||| | |||||||||    
T  43414780 cttaaaatatgaaaaattaaatttactacacatacaaacaaaatacattatagtaatattaacatacaaaatatacacattaaatgcactaacaa 43414874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 641
Target Start/End: Original strand, 5852841 - 5852907
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacaca 641  Q
    |||| |||||| |||||||||||||| ||||||| |||||||| |||||||| | ||||||||||||    
T  5852841 tcttgaaatatgaaaagtcaaatttaatacacatgcaaacaaaggacaatttcggaatattaacaca 5852907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 624 - 693
Target Start/End: Original strand, 37733932 - 37734001
Alignment:
Q  624 tttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||| ||||||||| ||||| ||| |||| ||||||| ||||||||||||||| ||| ||||||||||||    
T  37733932 tttgataatattaaaacacaaaatggacaaattaattgcactaacaatttttcgtaaaaaatgtgaaaaa 37734001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 619 - 689
Target Start/End: Complemental strand, 43189174 - 43189102
Alignment:
Q  619 gacaatttggtaatattaacacacagaatagacacat--taattacactaacaatttttcttaagaaatgtga 689  Q
    ||||||||||||||||||||| ||| |||||||| ||  ||||| ||||||||| |||||||||||| |||||    
T  43189174 gacaatttggtaatattaacatacaaaatagacatattataattgcactaacaacttttcttaagaattgtga 43189102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 640
Target Start/End: Complemental strand, 32715634 - 32715567
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacac 640  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||||||  | ||||| |||||||||||||    
T  32715634 ttgtcttgaaatataaaaagtcaaatttaatacacatac-aacaaagtataatttcgtaatattaacac 32715567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 586 - 670
Target Start/End: Original strand, 40205586 - 40205670
Alignment:
Q  586 aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||||  | |||| ||||||||| |||||| | |||||||| ||||||| |||||||| ||||||| || ||||||    
T  40205586 aaaaagtcaaatttgattcacaaacaaacaaaggacaatctagtaatattcacacacaaaatagacatattaatttcattaacaa 40205670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 581 - 680
Target Start/End: Complemental strand, 40702525 - 40702426
Alignment:
Q  581 aatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    |||||||||| ||||||| | |||||||| |||||||  |||||||  ||||||| || || | |||||||||||||| ||||||   ||||||||||||    
T  40702525 aatataaaaattcaaattcaatacacatataaacaaaaaacaatttaataatattcacgcataaaatagacacattaactacacttttaatttttcttaa 40702426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 620
Target Start/End: Original strand, 46732947 - 46732995
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatga 620  Q
    ||||||| |||||| |||||||||||||| |||||||||||| ||||||    
T  46732947 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaatga 46732995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 693
Target Start/End: Original strand, 29302494 - 29302557
Alignment:
Q  630 aatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||| ||| || | | ||||| |||||||| |||| ||||||||||||||||||||||    
T  29302494 aatattaacatacaaaacaaatacattgattacactgacaacttttcttaagaaatgtgaaaaa 29302557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 577 - 643
Target Start/End: Original strand, 6023896 - 6023962
Alignment:
Q  577 ttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacaca 643  Q
    |||||||||||||| | ||||||| || |||||||||||||   ||||||  |||||||||||||||    
T  6023896 ttaaaatataaaaaattaaatttaatatacatacaaacaaaaagcaatttaataatattaacacaca 6023962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 619 - 693
Target Start/End: Original strand, 9684752 - 9684826
Alignment:
Q  619 gacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||| ||||||||||| |||| || ||||||||||||||||   | || |||| |||| ||||||||||||    
T  9684752 gacaattttgtaatattaacgcacaaaacagacacattaattacatcgataactttttttaaaaaatgtgaaaaa 9684826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 680
Target Start/End: Original strand, 22786734 - 22786827
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    |||||| ||||| | ||||| || || |||| || ||||| |||| ||||| ||||| | |||||||||||| ||||||| | |||||||||||    
T  22786734 aaaagttaaattaaatacacctaaaagcaaaagataatttagtaaaattaatacacaaactagacacattaactacactaccgatttttcttaa 22786827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 572 - 714
Target Start/End: Original strand, 1901 - 2043
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    |||||||  ||||| |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  1901 ttgtcttgcaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaattacactaacaac 2000  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    || |||||||||||||||||||  ||||||| | |||||||||    
T  2001 ttatcttaagaaatgtgaaaaaagcaaagggaggttacataca 2043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 1e-43; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 12514573 - 12514695
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  12514573 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattgcactaacaa 12514672  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    |||||||||| | ||||||||||    
T  12514673 tttttcttaaaatatgtgaaaaa 12514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 31945900 - 31946022
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||  ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31945900 cttgtcttgaaatatgtaaagtcaaatttaatacacatataaacaaacgacaatttggtaatattaacacacaaaatagacacattaattacactaacaa 31945999  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  31946000 attttcttaagaaatgtgaaaaa 31946022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 571 - 712
Target Start/End: Complemental strand, 15981912 - 15981771
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||| |||||||  |||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  15981912 cttgtcttgaaatatgaaaagttaaatttaagacacatacaaactaatgacaatttggtaatattaacacacaaaacagacacattaattacaccaacaa 15981813  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     |||||||||||||||||||||| |||||||| |||| ||||    
T  15981812 cttttcttaagaaatgtgaaaaatacaaagggagcttgcata 15981771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 571 - 712
Target Start/End: Complemental strand, 16327241 - 16327100
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||| | | ||||    
T  16327241 cttgtcttgaaatatgaaaagttaaatttaatacaaatacaaacaaatgacaatttggtaatattaacacacaaaacagacacattaattatattgacaa 16327142  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     |||||||||||||||||||||| |||||||  |||||||||    
T  16327141 cttttcttaagaaatgtgaaaaatacaaaggaggcttacata 16327100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 575 - 712
Target Start/End: Complemental strand, 19839045 - 19838908
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | |||||||||||||| ||||||||||| |||    
T  19839045 tcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttt 19838946  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    |||||||||||||||||||  ||||||| | |||||||    
T  19838945 tcttaagaaatgtgaaaaaagcaaagggggattacata 19838908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 571 - 712
Target Start/End: Complemental strand, 16350639 - 16350498
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||| ||||    
T  16350639 cttgtcttgaaatatgaaaagttaaatttaatacaaatacaaacaaatgacaatttggtaatattaacacacaaaacagactcattaattacactgacaa 16350540  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
     |||| |||| |||||||||||| |||||||  |||||||||    
T  16350539 cttttattaaaaaatgtgaaaaatacaaaggaggcttacata 16350498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 1763931 - 1763809
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  1763931 cttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaacagacacattaattacactgacaa 1763832  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||||||||||||| |||||||    
T  1763831 cttttcttaagaaatatgaaaaa 1763809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 594 - 693
Target Start/End: Complemental strand, 3729484 - 3729385
Alignment:
Q  594 aaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  3729484 aaatttaatacacatacaaacaaagaacaatttggtaatattaacacacaaaatagacacattaattacaccaacaatttttcttaagaaatgtaaaaaa 3729385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 572 - 698
Target Start/End: Complemental strand, 11302972 - 11302846
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||| | |||||||||||||| ||||||| |||||||| |||||||| |||||||||||||| | || |||||||||||||| ||||||||     
T  11302972 ttgtcttgaaatgtgaaaagtcaaatttaatacacatgcaaacaaaggacaattttgtaatattaacacaaaaaacagacacattaattatactaacaac 11302873  T
Q  672 ttttcttaagaaatgtgaaaaacacaa 698  Q
    |||||||||||||||||||||| ||||    
T  11302872 ttttcttaagaaatgtgaaaaagacaa 11302846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 571 - 711
Target Start/End: Complemental strand, 5895849 - 5895709
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||| ||||||| |||||||| ||| ||| |||||||| |||||||||| ||||| || |||||||||||||||| ||||||    
T  5895849 cttgtcttgaaatatgaaaagttaaatttaatacacataaaaataaaggacaatttcgtaatattaatacacaaaacagacacattaattacattaacaa 5895750  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     |||||||||||||||||||||| |||| || ||| |||||    
T  5895749 cttttcttaagaaatgtgaaaaagacaatggatgcctacat 5895709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 591 - 693
Target Start/End: Original strand, 22410851 - 22410953
Alignment:
Q  591 gtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaa 690  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||||| | | || ||||||||||||||||||||||| |||||||||||||||||||    
T  22410851 gtcaaatttaatacacatacaaataaaagacaatttggtaatattaacataaaaaacagacacattaattacactaacaacttttcttaagaaatgtgaa 22410950  T
Q  691 aaa 693  Q
    |||    
T  22410951 aaa 22410953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 712
Target Start/End: Original strand, 28238301 - 28238443
Alignment:
Q  571 cttgtcttaaaatat-aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaaca 669  Q
    |||||||| |||||| ||||||||||||||| || ||||| ||||||  || ||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  28238301 cttgtcttgaaatatgaaaaagtcaaatttaataaacataaaaacaatggataatatggtaatattaacacacaaaatagacacattaattatactaaca 28238400  T
Q  670 atttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    |||||| ||||||||||||||| |  ||||| | |||||||||    
T  28238401 atttttattaagaaatgtgaaagaagcaaagagagcttacata 28238443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 580 - 700
Target Start/End: Original strand, 10669271 - 10669391
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| |||| |||||| ||||  |||||||||||||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  10669271 aaatatgaaaagtcaaatttaatacagatacaatcaaagaacaatttggtaatattaacacacaaaatagacacattaattgcactaacaatttttttaa 10669370  T
Q  680 agaaatgtgaaaaacacaaag 700  Q
    | |||||| ||||| ||||||    
T  10669371 aaaaatgtaaaaaaaacaaag 10669391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 6791494 - 6791374
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||  || | |||||||||||||| | ||||    
T  6791494 cttgtcttgaaatttaaaaagtcaaatttaatacacatacaaacaaatgacaatttaataatattaacacac--aaaacacacattaattacattgacaa 6791397  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||| |||||||||||||||||    
T  6791396 ctttttttaagaaatgtgaaaaa 6791374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 571 - 714
Target Start/End: Original strand, 3887930 - 3888073
Alignment:
Q  571 cttgtcttaaaatat-aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaaca 669  Q
    |||||||| |||||| ||||| ||||||||| |||||||  ||||| | ||||||||| ||||||||||||||| |||||||||||||| | || |||||    
T  3887930 cttgtcttgaaatatgaaaaaatcaaatttaatacacatgtaaacataagacaatttg-taatattaacacacaaaatagacacattaactgcaataaca 3888028  T
Q  670 atttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    | |||||||||||||||||||||   |||| ||||||||||||||    
T  3888029 acttttcttaagaaatgtgaaaattgcaaaaggtgcttacataca 3888073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 575 - 692
Target Start/End: Original strand, 5084530 - 5084650
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacac----attaattacactaacaa 670  Q
    |||| |||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||| || | ||||    |||||||||||||||||    
T  5084530 tcttgaaatataaaaagtcaacttta-tacacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacatttattaattacactaacaa 5084628  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
     |||||||||||||||||||||    
T  5084629 cttttcttaagaaatgtgaaaa 5084650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 571 - 698
Target Start/End: Original strand, 34513206 - 34513333
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| || |||||||||| |||  || ||||    
T  34513206 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttcgtaatattaacacacaaaacagacacattatttatgctgacaa 34513305  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     ||||||||| |||||| ||||| ||||    
T  34513306 attttcttaaaaaatgtaaaaaaaacaa 34513333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 30465960 - 30466078
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| || | ||| |||||||||||  |||| |||    
T  30465960 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaacaaacatattaattacaccgacaacttt 30466059  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    | ||||||||||| |||||    
T  30466060 tgttaagaaatgtaaaaaa 30466078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 31536126 - 31536008
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||||||||||| |||||||| ||||||| || |||||| ||||||||||| | | |||||| | ||||||||||||||||| |||    
T  31536126 tcttgaaatatgaaaagtcaaatttaatacacatataaacaaaagataatttgataatattaacaaataaaatagatatattaattacactaacaacttt 31536027  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    ||||||||||||| |||||    
T  31536026 tcttaagaaatgtaaaaaa 31536008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 586 - 712
Target Start/End: Complemental strand, 31780227 - 31780101
Alignment:
Q  586 aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaat 685  Q
    ||||||| ||||||| |||||| ||||||||| |||||||| ||||||| |||| ||| |||||||||||||||| || || ||| |||| |||||||||    
T  31780227 aaaaagtgaaatttaatacacaaacaaacaaaggacaatttagtaatatcaacatacaaaatagacacattaattgcattatcaacttttattaagaaat 31780128  T
Q  686 gtgaaaaacacaaagggtgcttacata 712  Q
     ||||||| ||||| ||||||||||||    
T  31780127 atgaaaaatacaaatggtgcttacata 31780101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 571 - 690
Target Start/End: Original strand, 197439 - 197558
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||||||||  ||||| | ||||||| |||||||||||||||||||||||||  ||||||| ||||||| || | |||||||||||| ||| | ||    
T  197439 cttgtcttaaaattgaaaaaattaaatttaatacacatacaaacaaatgacaatttaataatattgacacacaaaacaaacacattaattatactgataa 197538  T
Q  671 tttttcttaagaaatgtgaa 690  Q
     |||||||||||||||||||    
T  197539 cttttcttaagaaatgtgaa 197558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 580 - 702
Target Start/End: Complemental strand, 9428276 - 9428154
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||| ||||| | || |||||||||||||||| |||||| ||||||||||||||| |||||| |||||||||| | || ||| ||||||||    
T  9428276 aaatatgaaaagtaaaattcaatatacatacaaacaaatgataatttgataatattaacacacaaaatagatacattaattatagtagcaacttttctta 9428177  T
Q  680 agaaatgtgaaaaacacaaaggg 702  Q
    ||||| |||||||| | ||||||    
T  9428176 agaaacgtgaaaaaaataaaggg 9428154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 573 - 698
Target Start/End: Complemental strand, 9461409 - 9461284
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    |||||| |||||| |||||||||||||| ||||||||||||||||  | ||||| |||||||||||||| | || | |||||||||||||||  ||||      
T  9461409 tgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaagaataatttagtaatattaacacataaaacaaacacattaattacaccgacaaca 9461310  T
Q  673 tttcttaagaaatgtgaaaaacacaa 698  Q
    |||||||| |||||||||||| ||||    
T  9461309 tttcttaataaatgtgaaaaagacaa 9461284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 571 - 718
Target Start/End: Complemental strand, 20523090 - 20522943
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||   | |||||||||||||| ||||||| | || || |||||||| |||||||||    
T  20523090 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaagaaataatttggtaatattgacacacaaactaaactcattaattgcactaacaa 20522991  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacatacatgga 718  Q
      ||||||||||||| |  ||||  |||||  ||||||||||||||||    
T  20522990 catttcttaagaaatatacaaaatgcaaagaatgcttacatacatgga 20522943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 580 - 675
Target Start/End: Complemental strand, 33607464 - 33607369
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaattttt 675  Q
    |||||| ||||||||||||||  ||||||||||||||| || |||||| ||||||||||||||  |||||||||||||||| || |||||||||||    
T  33607464 aaatatgaaaagtcaaatttaacacacatacaaacaaaggataatttgataatattaacacactaaatagacacattaattgcattaacaattttt 33607369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 571 - 661
Target Start/End: Original strand, 31152976 - 31153066
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaatta 661  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||| ||| | | |||||||||||||||||    
T  31152976 cttgttttaaaatatgaaaagtcaaatttaatacacatacaaacaaataacaatttagtaatattgacatataaaatagacacattaatta 31153066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 588 - 699
Target Start/End: Original strand, 1514233 - 1514343
Alignment:
Q  588 aaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgt 687  Q
    ||||||||||||| |||||||| |||||| ||| |||||||||||||||||| ||| |||| ||| ||||||| |||||||||  |||||||| |||| |    
T  1514233 aaagtcaaatttaatacacatataaacaattgataatttggtaatattaacatacaaaataaacatattaattgcactaacaa-ctttcttaaaaaatat 1514331  T
Q  688 gaaaaacacaaa 699  Q
    |||||| |||||    
T  1514332 gaaaaatacaaa 1514343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 619 - 698
Target Start/End: Original strand, 4250694 - 4250773
Alignment:
Q  619 gacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaa 698  Q
    ||||| || |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  4250694 gacaacttcgtaatattaacacacaaaacagacacattaattacactgacaatttttcttaagaaatgtaaaaaagacaa 4250773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 16186688 - 16186569
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| ||||  |||||||||  |||||||| |||| ||||||| ||| || |||||||||||||||||||| ||    
T  16186688 cttgtcttgaaatatgaaaagtcaaatttaataca--tacaaacaagggacaatttcgtaa-attaacatacaaaacagacacattaattacactaataa 16186592  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||  ||||||||||||    
T  16186591 cttttcttacaaaatgtgaaaaa 16186569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 607 - 690
Target Start/End: Complemental strand, 30248645 - 30248563
Alignment:
Q  607 atacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaa 690  Q
    ||||||||||||| ||||||||||||||||||||||| || | ||||||||| |||||| |||| |||||||||||||||||||    
T  30248645 atacaaacaaatgccaatttggtaatattaacacacaaaacaaacacattaa-tacacttacaacttttcttaagaaatgtgaa 30248563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 575 - 660
Target Start/End: Original strand, 12514747 - 12514832
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaatt 660  Q
    |||| |||||| ||| |||| ||||| |||||||| |||||||||| |||||||||||||||||| ||| ||| ||||||||||||    
T  12514747 tcttcaaatatgaaaggtcatatttaatacacatataaacaaatgataatttggtaatattaacatacaaaatggacacattaatt 12514832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 571 - 626
Target Start/End: Original strand, 12503601 - 12503656
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaattt 626  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  12503601 cttgtcttgaaatatgaaaagtcaaatttactacacatacaaacaaaagacaattt 12503656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 611 - 693
Target Start/End: Complemental strand, 11081974 - 11081892
Alignment:
Q  611 aaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||| || |||||||||| ||||| ||| | |||||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  11081974 aaacaaaggataatttggtaacattaatacagaaaatagatatattaattacactaacaacttttcttaagatatgtgaaaaa 11081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 571 - 626
Target Start/End: Complemental strand, 3729540 - 3729485
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaattt 626  Q
    |||||||| ||||||  ||||| ||||||| |||||||||||||||||||||||||    
T  3729540 cttgtcttgaaatatgtaaagttaaatttaatacacatacaaacaaatgacaattt 3729485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 575 - 630
Target Start/End: Original strand, 31487056 - 31487111
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggta 630  Q
    |||| |||||| |||||||||| ||| |||||||||||||||| ||||||||||||    
T  31487056 tcttgaaatatgaaaagtcaaacttaatacacatacaaacaaaagacaatttggta 31487111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 693
Target Start/End: Original strand, 31487407 - 31487471
Alignment:
Q  629 taatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||| |||| ||||||||||||  ||||||| |||| | |||||||||| ||||    
T  31487407 taatattaacacacaaaatatacacattaattatgctaacaacttttttcaagaaatgtgcaaaa 31487471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 572 - 693
Target Start/End: Original strand, 8644784 - 8644906
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttgg---taatattaacacacagaatagacacattaattacactaac 668  Q
    ||||||||||||   |||| ||||||||| |||| ||||||||| |  | |||||||   ||||||||||| ||| |||||| | |||||||   |||||    
T  8644784 ttgtcttaaaatgagaaaattcaaatttagtacaaatacaaacaga--ataatttggtaataatattaacatacaaaatagatatattaattgtgctaac 8644881  T
Q  669 aatttttcttaagaaatgtgaaaaa 693  Q
    || |||| |||||||||||||||||    
T  8644882 aactttttttaagaaatgtgaaaaa 8644906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 680
Target Start/End: Complemental strand, 9941140 - 9941031
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||| | ||||| | ||||||||  ||| ||| |||| ||| | ||||| | |||| ||||||| |||| || |||    
T  9941140 cttgtctttaaatatgaaaagtcaaattaaatacacttgcaaacaaagaacagtttagtaaaattcaaacacaaattagatacattaactacattatcaa 9941041  T
Q  671 tttttcttaa 680  Q
     |||||||||    
T  9941040 cttttcttaa 9941031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 620
Target Start/End: Complemental strand, 31039264 - 31039215
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatga 620  Q
    |||||||| |||||| |||||||||||| | | |||||||||||||||||    
T  31039264 cttgtcttgaaatatgaaaagtcaaattaaatgcacatacaaacaaatga 31039215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 1e-43; HSPs: 89)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 572 - 714
Target Start/End: Complemental strand, 26512188 - 26512046
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | |||| |||||||||||| |||||||||    
T  26512188 ttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaataaacacattaattatactaacaat 26512089  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    |||| |||||||||||||||||  |||| || |||||||||||    
T  26512088 tttttttaagaaatgtgaaaaaagcaaaaggagcttacataca 26512046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 37355154 - 37355032
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| |||||    
T  37355154 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaagagacacattaattacacaaacaa 37355055  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  37355054 cttttcttaagaaatgtgaaaaa 37355032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 572 - 712
Target Start/End: Complemental strand, 17663741 - 17663601
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | ||||| ||||||||||||||||||||     
T  17663741 ttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaataggcacattaattacactaacaac 17663642  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    ||||||||||||||||||||||  ||||||| | |||||||    
T  17663641 ttttcttaagaaatgtgaaaaaagcaaaggggggttacata 17663601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 571 - 711
Target Start/End: Complemental strand, 27297695 - 27297555
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| || ||||||||||||||||||||||     
T  27297695 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataattttgtaatattaacacacaaaacagacacattaattacactaacag 27297596  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    |||||||||||||||||||||||  ||||||| | ||||||    
T  27297595 tttttcttaagaaatgtgaaaaaagcaaagggggtttacat 27297555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 24774983 - 24774861
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||| ||    
T  24774983 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagatacattaattacactaataa 24774884  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||| ||||||||||||    
T  24774883 attttcttaaaaaatgtgaaaaa 24774861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 44424713 - 44424591
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||| ||| || |||||||||||||||||||||||    
T  44424713 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactaacaa 44424614  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  44424613 cttttcttaagaaatgtgaaaaa 44424591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 20362099 - 20361979
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| | |||||||||||||| ||||||||||||    
T  20362099 ttgtcttgaaatacaaaaagtcaaattta-tacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaat 20362001  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||    
T  20362000 ttttcttaagaaatgtgaaaaa 20361979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 571 - 711
Target Start/End: Complemental strand, 41865833 - 41865694
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  || ||||||||||| |||||||||| ||||||||||||||||| || |||||    
T  41865833 cttgtcttaaaatataaaaagtcaaatttaatacacatacaaacaag-gataatttggtaatgttaacacacaaaatagacacattaattagaccaacaa 41865735  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     ||||||||||||||||||||||  |||| || ||||||||    
T  41865734 cttttcttaagaaatgtgaaaaaagcaaaaggggcttacat 41865694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 575 - 720
Target Start/End: Complemental strand, 43710033 - 43709887
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||||||||||| || |||| |||||||| ||||||| |||||||  |||||||||||||||| ||||||| |||||||| |||||||||||||    
T  43710033 tcttgaaatataaaaagtaaattttaatacacatataaacaaaggacaattaagtaatattaacacacaaaatagacgcattaattgcactaacaatttt 43709934  T
Q  675 t-cttaagaaatgtgaaaaacacaaagggtgcttacatacatggatg 720  Q
    | ||||||||||||||||||  ||||||||||||||||||| |||||    
T  43709933 tgcttaagaaatgtgaaaaatgcaaagggtgcttacatacagggatg 43709887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 44421567 - 44421445
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||||||||||| ||||||  |||||||| ||||||||||||||||||||||||| |||||||||||| ||| || ||| |||||||||||||| ||||    
T  44421567 cttgtcttaaaatttaaaaaaacaaatttaatacacatacaaacaaatgacaatttagtaatattaacaaacaaaacagatacattaattacactgacaa 44421468  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||||    
T  44421467 tttttcttaagaaatgtgaaaaa 44421445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 575 - 712
Target Start/End: Complemental strand, 45214839 - 45214702
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    ||||||||||| |||||| ||||||| |||||||||||||||| | |||||||  |||||||||||||| || |||||||||||||||||| |||| |||    
T  45214839 tcttaaaatatgaaaagttaaatttaatacacatacaaacaaagggcaatttgaaaatattaacacacaaaacagacacattaattacactgacaacttt 45214740  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    |||||||||||||||||||  ||||||| |||||||||    
T  45214739 tcttaagaaatgtgaaaaatgcaaagggggcttacata 45214702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 571 - 698
Target Start/End: Original strand, 17250948 - 17251075
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| ||||||||| || | ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||||    
T  17250948 cttgtcttgaaatatgaaaagtcaatttaaatacacatacaaacaaatgacaattttgtaatattaacacacaaaacagacacattaattatactaacaa 17251047  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     ||||||||| |||||||||||| ||||    
T  17251048 cttttcttaaaaaatgtgaaaaagacaa 17251075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 28264938 - 28265060
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| || ||||||||||| || |||||||||||||||||||||||||||||||||| |||| || | |||||||||||||||| ||||    
T  28264938 cttgtcttgaaatatgaatagtcaaatttaatatacatacaaacaaatgacaatttggtaatattaacgcacaaaacaaacacattaattacactgacaa 28265037  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  28265038 cttttcttaagaaatgtgaaaaa 28265060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 2131875 - 2131753
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||| ||||||||||| || |||||||||||||||||||||| ||||||||  |||||| |||||||||    
T  2131875 cttgtctttaaatatgaaaagtcaaatttaatacagatacaaacaaaagataatttggtaatattaacacacaaaatagacatgttaattgcactaacaa 2131776  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||||||||||||||| |||||    
T  2131775 cttttcttaagaaatgtaaaaaa 2131753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 41665828 - 41665706
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||| ||||||| |||||||||||||||| ||||||||| || |||||||||||| || |||||||||||||||||| ||||    
T  41665828 cttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaaggacaatttgatactattaacacacaaaacagacacattaattacactgacaa 41665729  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      |||||||||||||||||||||    
T  41665728 catttcttaagaaatgtgaaaaa 41665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 42250866 - 42251003
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||   || ||||| ||||| |||||||||||||||||||||| |||    
T  42250866 cttgtcttgaaatataaaaagtcaaatttaatacacatataaataaatgacaattt---aacattaaaacacaaaatagacacattaattacactaccaa 42250962  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     ||||| ||||||||||||||||  ||||||| ||||||||    
T  42250963 cttttcataagaaatgtgaaaaaagcaaagggggcttacat 42251003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 575 - 711
Target Start/End: Complemental strand, 28733937 - 28733803
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  ||| | || |||||||||||||||||  ||||||||    
T  28733937 tcttgaaatataaaaagtcaaattttatacacatacaaacaaatgacaatttggtaatatta--acataaaacagacacattaattacaccgacaatttt 28733840  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    |||||| |||||||||||| | || |||||| |||||    
T  28733839 tcttaaaaaatgtgaaaaagaaaatgggtgcctacat 28733803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 571 - 698
Target Start/End: Complemental strand, 34330120 - 34329993
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||| ||||||| |||||||||||||||| |||||||| |||||||||||||||| || ||  |||||||||| ||||||||    
T  34330120 cttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaaggacaattttgtaatattaacacacaaaacaggtacattaattatactaacaa 34330021  T
Q  671 tttttcttaagaaatgtgaaaaacacaa 698  Q
     |||| ||||||||||||||||| ||||    
T  34330020 ctttttttaagaaatgtgaaaaagacaa 34329993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 247778 - 247656
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| | |||| |||||||||||||| || ||||||||||||| | ||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  247778 cttgtcttgagatatgaaaagtcaaatttaatatacatacaaacaaagggcaattttataatattaacacacaaaatagacacattaattacactaacaa 247679  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||| ||||| ||||||||||||    
T  247678 ctttccttaaaaaatgtgaaaaa 247656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 572 - 698
Target Start/End: Complemental strand, 15851648 - 15851522
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||| ||||||||| |||||||| ||||||| ||||||||  ||||||||||||| | || |||||||||||||||||| ||||     
T  15851648 ttgtcttgaaatatgaaaattcaaatttaatacacatataaacaaaggacaatttcataatattaacacaaaaaacagacacattaattacactcacaac 15851549  T
Q  672 ttttcttaagaaatgtgaaaaacacaa 698  Q
    |||||||||||||||||||||| ||||    
T  15851548 ttttcttaagaaatgtgaaaaagacaa 15851522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 21012971 - 21012849
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || ||||||||||||||||||||| ||  |||||||||||| || |||||| ||||||||||||||| |||| ||||||||||| |||||||||    
T  21012971 cttgttttgaaatataaaaagtcaaatttaatatgcatacaaacaaaggataatttgataatattaacacacaaaataaacacattaattgcactaacaa 21012872  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     |||||||||||||| |||||||    
T  21012871 cttttcttaagaaatttgaaaaa 21012849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 692
Target Start/End: Original strand, 8065059 - 8065180
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||| ||| |||||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||| ||||    
T  8065059 cttgtcttgaaatatgaaaaatcaaagttaatacacatacaaacaaaggataatttggtaatattaacacacaaaacagacacattaattacactgacaa 8065158  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
      ||||||| ||||||||||||    
T  8065159 catttcttaggaaatgtgaaaa 8065180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 700
Target Start/End: Original strand, 40346068 - 40346197
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| ||| |||||| |||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| |||  ||||||||||| ||| |||||    
T  40346068 cttgccttgaaatatgaaaagtcaaatttaatacacatacaaataaaagacaatttagtaatattaacacacaaaatgaacacattaattgcacaaacaa 40346167  T
Q  671 tttttcttaagaaatgtgaaaaacacaaag 700  Q
     ||||||||| |||||||||||| ||||||    
T  40346168 cttttcttaaaaaatgtgaaaaaaacaaag 40346197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 577 - 690
Target Start/End: Original strand, 45150729 - 45150842
Alignment:
Q  577 ttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttc 676  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||||||  |||||||||||||||| |||  ||||||||||| ||| ||||| |||||    
T  45150729 ttaaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattgagtaatattaacacacaaaatgaacacattaattgcacaaacaacttttc 45150828  T
Q  677 ttaagaaatgtgaa 690  Q
    ||||||||||||||    
T  45150829 ttaagaaatgtgaa 45150842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 571 - 675
Target Start/End: Original strand, 375332 - 375436
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||| |||||    
T  375332 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttgataatactaacacacaaaatagacacattaattacacaaacaa 375431  T
Q  671 ttttt 675  Q
     ||||    
T  375432 ctttt 375436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 605 - 693
Target Start/End: Original strand, 4398545 - 4398632
Alignment:
Q  605 acatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  4398545 acatacaaacaaatgacaatttcgtaatattaacacacaaaatagacacattaattacactaacaacttttcttaa-aaatgtgaaaaa 4398632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 571 - 711
Target Start/End: Original strand, 35178780 - 35178920
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| ||| |||||| |||||||||||||| |||| ||||||| ||| |||||||| ||||||||| |||||| || | ||||||||| |||||| ||||    
T  35178780 cttgccttgaaatatgaaaagtcaaatttaatacaaatacaaataaaagacaatttcgtaatattatcacacaaaacatacacattaactacactgacaa 35178879  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
     |||||||||||||||||||||| |||| |||||| |||||    
T  35178880 cttttcttaagaaatgtgaaaaaaacaatgggtgcctacat 35178920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 3645441 - 3645319
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||| ||| |||||| |||||||||||||| || ||| |||||| || |||||||| |||||||||| ||||| |||||||||||||| || ||||||||    
T  3645441 cttgccttgaaatatgaaaagtcaaatttaatatacacacaaacgaaggacaatttagtaatattaatacacaaaatagacacattaagtaaactaacaa 3645342  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||||||||    
T  3645341 cttttcttaagaaatgtgaaaaa 3645319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 9718159 - 9718281
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||  | ||| |||||||| ||||||||||||||||  | |||||||||||||||||||||| || |||||||||||||||||| ||||    
T  9718159 cttgtcttgaaatacgataagacaaatttaatacacatacaaacaaagaataatttggtaatattaacacacaaaacagacacattaattacactgacaa 9718258  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
      |||||||||||||||||||||    
T  9718259 catttcttaagaaatgtgaaaaa 9718281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 14527741 - 14527620
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||||| |||| ||||||||| || |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||    
T  14527741 cttgttttgaaatatgaaaaatcaaatttaatatacatacaaacaaatgataattcggtaatattaacacacaaaatagacacattaattaccctaacaa 14527642  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    ||||| ||||  |||||||||||    
T  14527641 ttttt-ttaaataatgtgaaaaa 14527620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 43650152 - 43650030
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    ||||| || |||| ||||| |||||||||| ||||||||||||||||  ||||||| |||||||||||| ||| || |||||||||||||||||| ||||    
T  43650152 cttgttttgaaatttaaaaggtcaaatttaatacacatacaaacaaagaacaatttagtaatattaacatacaaaacagacacattaattacactgacaa 43650053  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
    ||||||| ||||||||| |||||    
T  43650052 tttttctaaagaaatgtaaaaaa 43650030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 571 - 692
Target Start/End: Original strand, 2048817 - 2048936
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| || |||||||| || |||||||| | |||||| |||||| |||||| |||||    
T  2048817 cttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaa-gataatttggt-atgttaacacataaaatagagacattatttacaccaacaa 2048914  T
Q  671 tttttcttaagaaatgtgaaaa 692  Q
     |||||||||||||||||||||    
T  2048915 cttttcttaagaaatgtgaaaa 2048936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 2917088 - 2917206
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||  ||||    ||| ||| ||||||||||||||||| ||||||||    
T  2917088 cttgtcttaaaatataaaaagttaaatttaatacacatacaaacaaaagacaatttattaat----acatacaaaatagacacattaattatactaacaa 2917183  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||||||||||||||| ||||    
T  2917184 cttttcttaagaaatgtggaaaa 2917206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 3237841 - 3237717
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaaca- 669  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||| || ||||| |||||||||||||||| || |||||||||||||||| ||| |     
T  3237841 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataattttgtaatattaacacacaaaacagacacattaattacattaataa 3237742  T
Q  670 -atttttcttaagaaatgtgaaaaa 693  Q
     | ||||||||| ||||||||||||    
T  3237741 cacttttcttaaaaaatgtgaaaaa 3237717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 11459271 - 11459149
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||| | |||| ||||||||| |||| ||||||||||| |||||||| |||||||||||||||| || |||||||||| ||||||  ||||    
T  11459271 cttgtcttgaaatttgaaaaatcaaatttaatacatatacaaacaaaggacaatttagtaatattaacacacaaaacagacacattatttacaccgacaa 11459172  T
Q  671 tttttcttaagaaatgtgaaaaa 693  Q
     ||||| ||||||||||||||||    
T  11459171 cttttcataagaaatgtgaaaaa 11459149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 572 - 714
Target Start/End: Complemental strand, 28190715 - 28190573
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||| | ||| ||| |||| ||||||||||||||||||||||||||||||||||| | |||| ||| |||||||| ||||||||     
T  28190715 ttgtcttgaaatatgaaaaattaaacttaatacatatacaaacaaatgacaatttggtaatattaacacaaaaaataaacatattaattatactaacaac 28190616  T
Q  672 ttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    |||   |||||||||| |||||  |||| ||||||||||||||    
T  28190615 tttctctaagaaatgtcaaaaatgcaaaaggtgcttacataca 28190573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 580 - 681
Target Start/End: Complemental strand, 11071777 - 11071676
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    |||||| |||||||||||||| ||||||||||| |||| |||||||| |||||||||||||| | | |||||||||||||| ||||||||| ||||||||    
T  11071777 aaatatgaaaagtcaaatttaatacacatacaagcaaaggacaatttagtaatattaacacataaattagacacattaattgcactaacaacttttctta 11071678  T
Q  680 ag 681  Q
    ||    
T  11071677 ag 11071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 572 - 693
Target Start/End: Complemental strand, 32677592 - 32677471
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||||| |||| ||||||||| ||||  ||||||||||||||||||||  ||||||||| || | ||||||||||||||||  | |||||||    
T  32677592 ttgtcttgaaatatgaaaaatcaaatttagtacatgtacaaacaaatgacaatttgaaaatattaacccataaaatagacacattaattgtattaacaat 32677493  T
Q  672 ttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||| ||||    
T  32677492 ttttcttaagaaatgtggaaaa 32677471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 571 - 698
Target Start/End: Original strand, 1246399 - 1246527
Alignment:
Q  571 cttgtcttaaaatat-aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaaca 669  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||  |||||||  ||||||||||||||| || | |||| ||||||| ||| |||    
T  1246399 cttgtcttgaaatatgaaaaagtcaaatttaatacacatacaaacaaagaacaatttcataatattaacacacaaaacaaacacgttaattatactgaca 1246498  T
Q  670 atttttcttaagaaatgtgaaaaacacaa 698  Q
    | |||| ||||||||||||||||| ||||    
T  1246499 actttttttaagaaatgtgaaaaagacaa 1246527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 575 - 711
Target Start/End: Original strand, 7278604 - 7278740
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| || ||||||||||| |||||||||||||||| | ||||||| ||||||   |||||| || | ||| |||||||||||| ||||||||    
T  7278604 tcttgaaatattaatagtcaaatttaatacacatacaaacaaagggcaatttgataatatattcacacaaaacaaacatattaattacactgacaatttt 7278703  T
Q  675 tcttaagaaatgtgaaaaacacaaagggtgcttacat 711  Q
    |||||| |||||||||||| |||||| | ||||||||    
T  7278704 tcttaacaaatgtgaaaaaaacaaagagggcttacat 7278740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 613 - 693
Target Start/End: Original strand, 8384001 - 8384081
Alignment:
Q  613 acaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| |||||||||||||||| |||||||    
T  8384001 acaaatgacaatttggtaatattaacacacaaaataaacacattaattgcactaactatttttcttaagaaatatgaaaaa 8384081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 587 - 711
Target Start/End: Original strand, 31644445 - 31644569
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| | || |||||||||||||| ||| | || ||||||||  |||||    
T  31644445 aaaaatcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacaaaaaacagacacattaattaaactgataacttttcttataaaatg 31644544  T
Q  687 tgaaaaacacaaagggtgcttacat 711  Q
    ||||||| |||| || ||| |||||    
T  31644545 tgaaaaagacaatggatgcctacat 31644569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 573 - 693
Target Start/End: Original strand, 38449703 - 38449823
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    |||||| |||||| || | ||||||||| ||||||||||||||||||| |||||| ||||||||| ||||| || ||||||||||||||||  || || |    
T  38449703 tgtcttgaaatatgaataatcaaatttaatacacatacaaacaaatgataatttgataatattaatacacaaaacagacacattaattacaaaaataact 38449802  T
Q  673 tttcttaagaaatgtgaaaaa 693  Q
    ||| |||||||||||||||||    
T  38449803 tttattaagaaatgtgaaaaa 38449823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 573 - 684
Target Start/End: Complemental strand, 14420792 - 14420682
Alignment:
Q  573 tgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatt 672  Q
    |||||| |||| | |||||| ||||| | ||||||| |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| |    
T  14420792 tgtcttgaaatttgaaaagttaaattaa-tacacatgcaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactaacaact 14420694  T
Q  673 tttcttaagaaa 684  Q
    |||||| |||||    
T  14420693 tttctttagaaa 14420682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 602 - 693
Target Start/End: Original strand, 44274685 - 44274776
Alignment:
Q  602 tacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||||||||||||||||||||||| |||||||||||| | || |||||||||||||||| | |||| ||||||||| ||||||||||||    
T  44274685 tacacatacaaacaaatgacaatttggcaatattaacacataaaacagacacattaattacattgacaacttttcttaaaaaatgtgaaaaa 44274776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 7257929 - 7258047
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||||||||||||||||||||||||  ||||| ||||||| |||||||||||  ||||||||| ||||  || | |||||||||||||| ||| ||||||    
T  7257929 tcttaaaatataaaaagtcaaattttatacacgtacaaacgaatgacaatttaataatattaatacactaaacaaacacattaattacattaataatttt 7258028  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    |||||| |||| |||||||    
T  7258029 tcttaaaaaatatgaaaaa 7258047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 583 - 693
Target Start/End: Original strand, 35241707 - 35241817
Alignment:
Q  583 tataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaaga 682  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||| ||||||||||| ||| || |||||||||||||||||  ||||  ||||||| ||    
T  35241707 tataaaaagtcaaatttattacgcatacaaacaaatgataatttgataatattaacaaacaaaacagacacattaattacacagacaacatttcttatga 35241806  T
Q  683 aatgtgaaaaa 693  Q
    ||||| |||||    
T  35241807 aatgtaaaaaa 35241817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 577 - 693
Target Start/End: Original strand, 13477026 - 13477142
Alignment:
Q  577 ttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttc 676  Q
    ||||||||| |||| ||||||||| ||  |||||||| ||| |||||| | |||||||||||||| | |||| ||| ||||||| |||||||||||||||    
T  13477026 ttaaaatatgaaaaatcaaatttaatatgcatacaaataaaggacaatctagtaatattaacacataaaataaacatattaattgcactaacaatttttc 13477125  T
Q  677 ttaagaaatgtgaaaaa 693  Q
    |||| ||||||||||||    
T  13477126 ttaaaaaatgtgaaaaa 13477142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 572 - 665
Target Start/End: Original strand, 2521288 - 2521381
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacact 665  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||  |||||||| |||| | |||||||||||||| ||||||    
T  2521288 ttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaagacaatttaataatattaccacataaaatagacacattaactacact 2521381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 594 - 711
Target Start/End: Complemental strand, 4033676 - 4033559
Alignment:
Q  594 aaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||| ||||||||||||||||  ||||||| |||||||||||||| | || ||| |||||||||||||||| || |||||||||||||| | |||||    
T  4033676 aaatttaatacacatacaaacaaagaacaatttagtaatattaacacagaaaacagaaacattaattacactaataacttttcttaagaaatataaaaaa 4033577  T
Q  694 cacaaagggtgcttacat 711  Q
      ||||||| | ||||||    
T  4033576 agcaaagggagtttacat 4033559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 571 - 693
Target Start/End: Original strand, 6275554 - 6275677
Alignment:
Q  571 cttgtcttaaaatataaaa-agtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaaca 669  Q
    |||||||| |||||| ||| ||| ||||||| |||| ||||||||||| ||||||||  |||| |||||||||| |||||||||||||||| ||||||||    
T  6275554 cttgtcttgaaatatgaaatagttaaatttaatacatatacaaacaaaagacaatttcataat-ttaacacacaaaatagacacattaattgcactaaca 6275652  T
Q  670 a-tttttcttaagaaatgtgaaaaa 693  Q
    | ||||| |||||||||| ||||||    
T  6275653 atttttttttaagaaatgggaaaaa 6275677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 572 - 664
Target Start/End: Complemental strand, 7255718 - 7255626
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacac 664  Q
    ||||||| |||||| |||||||||||||| |||||| |||| |||| || |||||||||||||||| ||||| || |||||||||||||||||    
T  7255718 ttgtcttgaaatatgaaaagtcaaatttaatacacaaacaatcaaaggataatttggtaatattaatacacaaaacagacacattaattacac 7255626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 572 - 699
Target Start/End: Complemental strand, 6597972 - 6597846
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| || |||||||| ||||||||| |||||||||||| ||| || | ||||||||| |||||||||| |||||||| ||||||||||  |||||     
T  6597972 ttgtctttaactataaaaattcaaatttaatacacatacaaa-aaaggatattttggtaatgttaacacacaaaatagacatattaattacatcaacaac 6597874  T
Q  672 ttttcttaagaaatgtgaaaaacacaaa 699  Q
    ||||  ||| |||||||||||| |||||    
T  6597873 tttttgtaaaaaatgtgaaaaaaacaaa 6597846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 572 - 659
Target Start/End: Original strand, 38982059 - 38982146
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaat 659  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||  | |||||||||||||||||||||| || ||| ||||||||    
T  38982059 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaaaataatttggtaatattaacacacaaaacagatacattaat 38982146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 575 - 661
Target Start/End: Complemental strand, 4758140 - 4758054
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaatta 661  Q
    |||||||||||  ||||||||||||| |||||||| ||||||| ||||||||  ||||||||||||||| |||| ||||||||||||    
T  4758140 tcttaaaatatgtaaagtcaaatttaatacacataaaaacaaaggacaatttcataatattaacacacaaaataaacacattaatta 4758054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 587 - 693
Target Start/End: Original strand, 36174795 - 36174901
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatg 686  Q
    |||||||||||||| |||||||||||| ||| ||||||||  ||||| | |||||   |||||||| |||| || ||||||||||||||||||||||| |    
T  36174795 aaaagtcaaatttaatacacatacaaataaaagacaatttaataatactcacacatgaaatagacatattatttgcactaacaatttttcttaagaaacg 36174894  T
Q  687 tgaaaaa 693  Q
    |||||||    
T  36174895 tgaaaaa 36174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 594 - 701
Target Start/End: Complemental strand, 3337781 - 3337674
Alignment:
Q  594 aaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||  || |||| ||||||| ||| ||  ||||  ||||||||||||||||||||||    
T  3337781 aaatttaatacacgtataaacaaatgacaatttgctaatattaacatgcaaaatatacacattgattgcagcaacatcttttcttaagaaatgtgaaaaa 3337682  T
Q  694 cacaaagg 701  Q
     |||||||    
T  3337681 tacaaagg 3337674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 575 - 693
Target Start/End: Complemental strand, 3326838 - 3326720
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||| |||||| |||||| ||||||  |||||||| ||||||| ||||||||  ||||||||| | ||| || |||||||||||||||||  ||||||||    
T  3326838 tcttgaaatatgaaaagttaaattttatacacatataaacaaaggacaatttaataatattaatatacaaaacagacacattaattacaccgacaatttt 3326739  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    | |||| |||| |||||||    
T  3326738 ttttaaaaaatatgaaaaa 3326720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 571 - 661
Target Start/End: Complemental strand, 23464801 - 23464711
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaatta 661  Q
    ||||| || |||||| |||||||||||||| |||| ||||||| ||| ||||||||| ||||||| || |||| |||||||||||||||||    
T  23464801 cttgttttgaaatatgaaaagtcaaatttaatacatatacaaataaaggacaatttgataatatttacgcacaaaatagacacattaatta 23464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 643
Target Start/End: Original strand, 25731173 - 25731245
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacaca 643  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||||| || |||||| |||||||||||||||    
T  25731173 cttgtcttaaaatatgaaaaatcaaatttaatatacatacaaacaaaagataatttgataatattaacacaca 25731245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 621 - 693
Target Start/End: Complemental strand, 27749580 - 27749508
Alignment:
Q  621 caatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||| |||||||||| ||||| || ||||| |||||||||||| |||| ||||||||||||||||||||||    
T  27749580 caatttagtaatattaatacacaaaacagacatattaattacactgacaacttttcttaagaaatgtgaaaaa 27749508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 575 - 639
Target Start/End: Original strand, 43119360 - 43119424
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaaca 639  Q
    |||| |||||| |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  43119360 tcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttagtaatattaaca 43119424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 571 - 666
Target Start/End: Complemental strand, 44101490 - 44101395
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacacta 666  Q
    ||||||| |||||||||||| ||||||||| |||||||| ||| |||  | ||||| |||||||||| ||||| |||| ||||||||||| |||||    
T  44101490 cttgtctcaaaatataaaaaatcaaatttaatacacatataaataaagaataatttagtaatattaaaacacaaaataaacacattaattgcacta 44101395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 665
Target Start/End: Original strand, 16808810 - 16808904
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacact 665  Q
    |||||||| |||||| |||| | || |||| || |||||||||||||||||||||| |||||||||| ||| | |||| ||||||||||| ||||    
T  16808810 cttgtcttgaaatatgaaaaattaattttaatatacatacaaacaaatgacaatttagtaatattaatacataaaatatacacattaattgcact 16808904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 665
Target Start/End: Original strand, 16848091 - 16848185
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacact 665  Q
    |||||||| |||||| |||| | || |||| || |||||||||||||||||||||| |||||||||| ||| | |||| ||||||||||| ||||    
T  16848091 cttgtcttgaaatatgaaaaattaattttaatatacatacaaacaaatgacaatttagtaatattaatacataaaatatacacattaattgcact 16848185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 575 - 693
Target Start/End: Original strand, 36175075 - 36175193
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttt 674  Q
    |||||||||||||||||| ||||||| ||   |||||||||||  |||| || || ||||| |||| || |||||||||||| |||  | ||| ||||||    
T  36175075 tcttaaaatataaaaagttaaatttaatatgtatacaaacaaagaacaacttagtgatattcacacgcaaaatagacacattgattttattaataatttt 36175174  T
Q  675 tcttaagaaatgtgaaaaa 693  Q
    ||||||||||| |||||||    
T  36175175 tcttaagaaatatgaaaaa 36175193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 2395846 - 2395798
Alignment:
Q  645 aatagacacattaattacactaacaatttttcttaagaaatgtgaaaaa 693  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  2395846 aatagacacattaattacactaacaacttttcttaagaaatgtaaaaaa 2395798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 628 - 680
Target Start/End: Complemental strand, 20427002 - 20426950
Alignment:
Q  628 gtaatattaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||||||||    
T  20427002 gtaataataacacacaaaatagacacattaatttcactaacaatttttcttaa 20426950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 624 - 692
Target Start/End: Original strand, 34042096 - 34042164
Alignment:
Q  624 tttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaa 692  Q
    |||||||||||||||| ||| ||||||||||||||||  ||||||||||||| | || |||||||||||    
T  34042096 tttggtaatattaacatacaaaatagacacattaattgaactaacaatttttttaaaaaaatgtgaaaa 34042164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 651 - 714
Target Start/End: Original strand, 41327821 - 41327884
Alignment:
Q  651 cacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
    |||||||||| |||| |||| |||||||| ||||||||||||| |||||||| |||||||||||    
T  41327821 cacattaattgcactgacaacttttcttatgaaatgtgaaaaatacaaagggggcttacataca 41327884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 575 - 667
Target Start/End: Original strand, 35453726 - 35453816
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaa 667  Q
    |||| |||||| |||||| ||||||| ||||  || |||||||  ||||||| |||||||||||| | | |||||||||||||||||||||||    
T  35453726 tcttcaaatatgaaaagttaaatttaataca--taaaaacaaagaacaatttagtaatattaacatataaaatagacacattaattacactaa 35453816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 714
Target Start/End: Complemental strand, 8667725 - 8667613
Alignment:
Q  603 acacatacaaacaaatgacaatttggtaatattaac-acacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaagg 701  Q
    ||||||||||||||| || |||||| |||||||||  | ||| || ||||| |||||||| ||| |||| |||||||| |||||||||||||  ||||||    
T  8667725 acacatacaaacaaaggagaatttgataatattaaagatacaaaacagacatattaattagactgacaacttttcttaggaaatgtgaaaaatgcaaagg 8667626  T
Q  702 gtgcttacataca 714  Q
      |||| ||||||    
T  8667625 aggcttgcataca 8667613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 692
Target Start/End: Complemental strand, 13534471 - 13534411
Alignment:
Q  632 tattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaa 692  Q
    |||||||||||| || | |||||||||||||||| ||||  ||||||||||||||||||||    
T  13534471 tattaacacacaaaacaaacacattaattacactgacaacatttcttaagaaatgtgaaaa 13534411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 633 - 680
Target Start/End: Original strand, 22590437 - 22590484
Alignment:
Q  633 attaacacacagaatagacacattaattacactaacaatttttcttaa 680  Q
    ||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  22590437 attaacacacaaagtagacacattaattacattaacaatttttcttaa 22590484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 678
Target Start/End: Original strand, 31583632 - 31583724
Alignment:
Q  585 taaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctt 678  Q
    ||||| ||||||||||   |||||||||||||| ||||||||| ||||||||| ||||| | |||| | ||||||| ||| |||||| ||||||    
T  31583632 taaaatgtcaaatttaaagcacatacaaacaaaggacaatttgataatattaatacacaaagtaga-atattaattgcacaaacaatgtttctt 31583724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 587 - 656
Target Start/End: Original strand, 43638824 - 43638893
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacatt 656  Q
    |||| ||||||||| |||||||| ||| |||||| ||||| ||||||||||||| || |||| |||||||    
T  43638824 aaaaatcaaatttaatacacatataaataaatgataattttgtaatattaacacgcaaaataaacacatt 43638893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 593 - 673
Target Start/End: Complemental strand, 8393304 - 8393224
Alignment:
Q  593 caaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaattt 673  Q
    ||||||||  |||||||||||||||  | |||||| ||||||||||||||| || | ||||||||| |||| ||| |||||    
T  8393304 caaatttaaaacacatacaaacaaagaaaaatttgataatattaacacacaaaacaaacacattaactacattaataattt 8393224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 643
Target Start/End: Complemental strand, 11121328 - 11121259
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacaca 643  Q
    ||||||| |||||||||||||||||||||  | ||||  ||||||| ||||||||| ||||||| |||||||    
T  11121328 ttgtcttgaaatataaaaagtcaaattta--atacatttaaacaaaggacaatttgataatatttacacaca 11121259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 631
Target Start/End: Original strand, 12498255 - 12498314
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaa 631  Q
    |||||||| |||||| |||| ||||||||| ||||||||||||||||  ||||||||||||    
T  12498255 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaa-aacaatttggtaa 12498314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 593 - 673
Target Start/End: Complemental strand, 36846851 - 36846771
Alignment:
Q  593 caaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaattt 673  Q
    ||||||||  |||||||||||||||  | |||||| ||||||||||||||| || | ||||||||| |||| ||| |||||    
T  36846851 caaatttaaaacacatacaaacaaagaaaaatttgataatattaacacacaaaacaaacacattaactacattaataattt 36846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 593 - 673
Target Start/End: Original strand, 44462590 - 44462670
Alignment:
Q  593 caaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaattt 673  Q
    ||||||||  |||||||||||||||  | |||||| ||||||||||||||| || | ||||||||| |||| ||| |||||    
T  44462590 caaatttaaaacacatacaaacaaagaaaaatttgataatattaacacacaaaacaaacacattaactacattaataattt 44462670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 572 - 679
Target Start/End: Original strand, 1604302 - 1604409
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| | ||||||||||||||||| | ||| | |||||||||| ||||| ||  ||| ||| ||||| | | |||||| ||||| ||||||  ||||    
T  1604302 ttgtcttcagatataaaaagtcaaattaaatacgcgtacaaacaaaggacaaattaataaaattcacacataaattagacatattaactacactgccaat 1604401  T
Q  672 ttttctta 679  Q
    ||||||||    
T  1604402 ttttctta 1604409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 635
Target Start/End: Complemental strand, 14286596 - 14286537
Alignment:
Q  576 cttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatatt 635  Q
    |||||||||| ||||||||| ||||  | |||| ||||||||||||||||| ||||||||    
T  14286596 cttaaaatatgaaaagtcaactttaaaatacattcaaacaaatgacaatttagtaatatt 14286537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 575 - 641
Target Start/End: Complemental strand, 2654415 - 2654349
Alignment:
Q  575 tcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacaca 641  Q
    ||||||||||| |||| ||||||| | |||||||| ||||||| |||||||| |||| ||| |||||    
T  2654415 tcttaaaatatgaaaaatcaaattaaatacacatataaacaaaagacaatttagtaacattcacaca 2654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 587 - 641
Target Start/End: Original strand, 12417621 - 12417675
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacaca 641  Q
    |||| ||||||||| |||||||||||| |||  |||||||| |||||||||||||    
T  12417621 aaaaatcaaatttaatacacatacaaataaaaaacaatttgttaatattaacaca 12417675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 587 - 641
Target Start/End: Original strand, 12429681 - 12429735
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacaca 641  Q
    |||| ||||||||| |||||||||||| |||  |||||||| |||||||||||||    
T  12429681 aaaaatcaaatttaatacacatacaaataaaaaacaatttgttaatattaacaca 12429735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 630
Target Start/End: Complemental strand, 20427198 - 20427149
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggta 630  Q
    |||||| |||||||||||||| ||||||||| || ||||||||||||||||    
T  20427198 aaatatgaaaagtcaaatttaatacacatac-aataaatgacaatttggta 20427149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 675
Target Start/End: Original strand, 15578091 - 15578172
Alignment:
Q  594 aaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaattttt 675  Q
    |||||||  ||||||||||| |||  | |||||| ||||||||||||||| || | ||||||||| |||| ||| |||||||    
T  15578091 aaatttaaaacacatacaaataaagaaaaatttgataatattaacacacaaaacaaacacattaactacattaataattttt 15578172  T

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Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 685
Target Start/End: Complemental strand, 25731705 - 25731602
Alignment:
Q  580 aaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttctta 679  Q
    ||||||||||| |||||||||  ||||||||||  |||  | ||||| ||  |||||| ||||| |||||| || |||||||||||||||| | ||||||    
T  25731705 aaatataaaaaatcaaatttaacacacatacaat-aaagaaaaatttagttttattaatacacaaaatagatactttaattacactaacaa-tcttctta 25731608  T
Q  680 agaaat 685  Q
    ||||||    
T  25731607 agaaat 25731602  T

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Target: scaffold0012 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 571 - 714
Target Start/End: Original strand, 99804 - 99947
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| ||||||| |||||||| |||||||| |||||||||||||||| ||||||||||| | || |||||||||    
T  99804 cttgtcttgaaatatgaaaagtcaaatttaatacacattcaaacaaaagacaatttcgtaatattaacacacaaaatagacacataagttgcactaacaa 99903  T
Q  671 tttttcttaagaaatgtgaaaaacacaaagggtgcttacataca 714  Q
     ||||||||| |||| |||||||  |||| | ||||||||||||    
T  99904 cttttcttaacaaatatgaaaaatgcaaaagatgcttacataca 99947  T

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Target: scaffold0038 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 571 - 712
Target Start/End: Original strand, 38463 - 38605
Alignment:
Q  571 cttgtcttaaaatat-aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaaca 669  Q
    |||||||| |||||| ||||||||||||||| || ||||| ||||||  || ||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  38463 cttgtcttgaaatatgaaaaagtcaaatttaataaacataaaaacaatggataatatggtaatattaacacacaaaatagacacattaattatactaaca 38562  T
Q  670 atttttcttaagaaatgtgaaaaacacaaagggtgcttacata 712  Q
    |||||| ||||||||||||||| |  ||||| | |||||||||    
T  38563 atttttattaagaaatgtgaaagaagcaaagagagcttacata 38605  T

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Target: scaffold0013 (Bit Score: 68; Significance: 6e-30; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 586 - 693
Target Start/End: Complemental strand, 49239 - 49132
Alignment:
Q  586 aaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaat 685  Q
    ||||||||||||||| || |||| |||||||||||||||||  ||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||    
T  49239 aaaaagtcaaatttaataaacatgcaaacaaatgacaatttaataatattaacacacaaagtagacatattaattacattaacaatttttcttaagaaat 49140  T
Q  686 gtgaaaaa 693  Q
    || |||||    
T  49139 gtaaaaaa 49132  T

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Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 663
Target Start/End: Original strand, 61275 - 61361
Alignment:
Q  577 ttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattaca 663  Q
    ||||| ||| |||||| ||||||| |||||||| ||| ||| ||||||||  ||||||||||||||| || | |||| |||||||||    
T  61275 ttaaattatgaaaagttaaatttaatacacatataaataaaggacaatttaataatattaacacacaaaacaaacacgttaattaca 61361  T

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Target: scaffold0699 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 571 - 690
Target Start/End: Complemental strand, 7695 - 7577
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaa 670  Q
    |||||||| |||||| |||||||||||||| |||||||| ||||||| |||||||| |||||| | ||| ||| ||||||||| | ||||||| ||||||    
T  7695 cttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaattttgtaatacttaca-acaaaatagacacctcaattacattaacaa 7597  T
Q  671 tttttcttaagaaatgtgaa 690  Q
     |||||||||||||||||||    
T  7596 cttttcttaagaaatgtgaa 7577  T

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Target: scaffold0182 (Bit Score: 53; Significance: 5e-21; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 587 - 683
Target Start/End: Complemental strand, 18791 - 18695
Alignment:
Q  587 aaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaa 683  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||||||||| |||| |||| ||| ||||||| || |||||| |||| |||||||    
T  18791 aaaagtcaaatttaaaacacatagaaacaaatgacaatttggtaatattaacccacaaaataaacaaattaattgcattaacaactttttttaagaa 18695  T

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Target: scaffold0182; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 571 - 665
Target Start/End: Complemental strand, 22178 - 22084
Alignment:
Q  571 cttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacact 665  Q
    |||||||| |||||| |||||| ||||||| || ||||||||||||| |||||| |||||||||||| ||||| || | ||||||||||||||||    
T  22178 cttgtcttcaaatatgaaaagttaaatttaatatacatacaaacaaaggacaatatggtaatattaatacacaaaacaaacacattaattacact 22084  T

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Target: scaffold0166 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 572 - 685
Target Start/End: Original strand, 23639 - 23750
Alignment:
Q  572 ttgtcttaaaatataaaaagtcaaatttactacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaat 671  Q
    ||||||| |||| | |||| ||||||||| |||||||||||| |||  |||||||| ||||||||||| ||| |||| |||||||||||||| |||| ||    
T  23639 ttgtcttcaaatgtgaaaaatcaaatttaatacacatacaaa-aaagaacaatttgataatattaacatacaaaataaacacattaattacattaactat 23737  T
Q  672 ttttcttaagaaat 685  Q
    |||| |||||||||    
T  23738 tttt-ttaagaaat 23750  T

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Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 607 - 700
Target Start/End: Complemental strand, 19612 - 19521
Alignment:
Q  607 atacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaacacaaag 700  Q
    ||||||||||| || ||||||||||||||| |||| |  ||||||| ||||||| |||| |||| ||||| |||||||||||||||| ||||||    
T  19612 atacaaacaaaggataatttggtaatattagcacaaa--atagacatattaattgcactgacaacttttcgtaagaaatgtgaaaaatacaaag 19521  T

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