View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4699_low_1 (Length: 756)
Name: NF4699_low_1
Description: NF4699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4699_low_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 677; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 677; E-Value: 0
Query Start/End: Original strand, 20 - 747
Target Start/End: Original strand, 36314735 - 36315465
Alignment:
| Q |
20 |
tggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccat |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314735 |
tggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttcccgcgttttttgatgttcaattcaccttgttttggttcccat |
36314834 |
T |
|
| Q |
120 |
tcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttg |
219 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314835 |
tcaagactaaattcacctgacgtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttg |
36314934 |
T |
|
| Q |
220 |
ggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacat |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36314935 |
ggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtaaagttgttgaagcaaaaagttacccgtgtctaacat |
36315034 |
T |
|
| Q |
320 |
agtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgat |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36315035 |
agtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagaacaccagagtaatctagtgat |
36315134 |
T |
|
| Q |
420 |
aaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccattaacatctattacaatcaagtatcttctcaatt |
519 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36315135 |
aaaactgttgaatcttcttctgagtcaaagggatgatttctatcataaaaccacactactgtgccattaacatctattacaatcaagtatcttctcaatt |
36315234 |
T |
|
| Q |
520 |
caagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagt |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36315235 |
caagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagt |
36315334 |
T |
|
| Q |
620 |
agtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatg---aatattgtttcaaaacgaagaga |
716 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
36315335 |
agtagtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaataatattgtttcaaaaagaagaga |
36315434 |
T |
|
| Q |
717 |
aatgtactcaccaaacccgaaggagaataat |
747 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |
|
|
| T |
36315435 |
aatgtactcatcaaacccgaaggagaataat |
36315465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 317; Significance: 1e-178; HSPs: 53)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 21 - 747
Target Start/End: Complemental strand, 19390615 - 19389897
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
19390615 |
ggaatgttctcgaataaaccattgcttttaagttttccgcttttccaatacactttgccgcgtttcttgatgttcaattccccttgttttggttcccatt |
19390516 |
T |
|
| Q |
121 |
caagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgg |
220 |
Q |
| |
|
|||||||||||||||||| |||| ||||| ||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19390515 |
caagactaaattcacctggagttggtagcgaagaagccaacca--------atgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgg |
19390424 |
T |
|
| Q |
221 |
gatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacata |
320 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||| ||||||| |||| |
|
|
| T |
19390423 |
gatcaaagtgtcgtcgggataatcaaaactctgccataataaactctttgtaccatttgggtgaaatttttgaagcacaaagttaccggtgtctagcata |
19390324 |
T |
|
| Q |
321 |
gtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgata |
420 |
Q |
| |
|
|| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||| | || ||||| |
|
|
| T |
19390323 |
gttgccatagtgttgtttatgggttgaggtgaagagtaaatgattattggtttcctattttgagattctattttgagcacaccagtgtagtttaatgata |
19390224 |
T |
|
| Q |
421 |
aaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccattaacatctattacaatcaagtatc-----ttctc |
515 |
Q |
| |
|
|||||| ||| | | | |||| | || ||||||| || ||||||||||||| |||||| ||||||| | || | | ||||| | || | |
|
|
| T |
19390223 |
aaactgctgagtttacgtctacg------ggttgatttcgattataaaaccacactcctgtgcgattaacagttgctatagttaagtaaccacccttgtt |
19390130 |
T |
|
| Q |
516 |
aattcaa-gacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaaga |
614 |
Q |
| |
|
||| || ||||||||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
19390129 |
gattaaaagacaatacttgtcttgtttagaacgtagcttggaattggaattcaatgtatcacctggcttcaaactatcatttgttgcattaacacaaatg |
19390030 |
T |
|
| Q |
615 |
ctagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaaga |
714 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||| | || ||||||||||||| | ||||||||||||| |||| |||||||||||| ||||| |
|
|
| T |
19390029 |
ttagtagaagtaatccaccacaaccataagtatatcaatacaacttgtttctttatttcatagcttatcatgattgatgataattgtttcaaaaagaaga |
19389930 |
T |
|
| Q |
715 |
gaaatgtactcaccaaacccgaaggagaataat |
747 |
Q |
| |
|
||||| ||||||| ||||||||| ||||||||| |
|
|
| T |
19389929 |
gaaatatactcactaaacccgaacgagaataat |
19389897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 21 - 731
Target Start/End: Complemental strand, 19337485 - 19336766
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
19337485 |
ggaatgttctcgaacattccattgcttttgagttttccacttttccaatgcactttgccacttttcctgatgttcaattcaccttcttttggttcccatt |
19337386 |
T |
|
| Q |
121 |
caagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgg |
220 |
Q |
| |
|
||||||||| |||||||| |||| ||||| || ||| ||||| |||||||||||||||||||||||||||||| |||||||| || |||||||||||||| |
|
|
| T |
19337385 |
caagactaagttcacctggagttggtagcgaatgagccaaccgtgaaaccaatgaccaattatgtcctgttttacgattaacacctaacttcatcgttgg |
19337286 |
T |
|
| Q |
221 |
gatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacata |
320 |
Q |
| |
|
| |||| || | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
19337285 |
taacaaagtgtctacgggagaatcaaaactctgccataatatactctttgtcccatttgggtgaagctgttgaagcacgaagttaccggtgtctaacata |
19337186 |
T |
|
| Q |
321 |
gtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatcttgacattctattttgagcacaccagagtaatctagtg |
417 |
Q |
| |
|
||||||||||||| |||| | |||||||| ||| |||||||| |||||| ||||||| |||| ||||||||||||| ||||||||||| ||||||| |
|
|
| T |
19337185 |
gtggccacagtgtcgttggttggttgaggcgaataataaatgataattggtacattcctattttgaaattctattttgagtacaccagagtagtctagtg |
19337086 |
T |
|
| Q |
418 |
ataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccattaacatc--ta-ttacaatcaagta----tc |
510 |
Q |
| |
|
||| ||||| ||||| ||| | | | ||| ||||||||||| || | ||||||||||| ||| | |||| | || |||||| ||||| || |
|
|
| T |
19337085 |
atagaactgctgaat------ctatggctatgggttgatttctatcgtacatccacactactgcgccgtcaacaccactacttacaaccaagtgagcttc |
19336992 |
T |
|
| Q |
511 |
ttctcaattcaa-----gacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcatta |
605 |
Q |
| |
|
||| | || || ||||| |||| ||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
19336991 |
ttcgctatcgaaatatagacaaaactttccttgttcagaacatagcttggatttggaatttaatgtatcacctggcttcaaactatcacttgttgcttta |
19336892 |
T |
|
| Q |
606 |
acataaagactagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttca |
705 |
Q |
| |
|
||| ||| | ||| ||| || ||||||||||||||||||||||| ||| ||||||||| ||| || |||||||||||||||| ||||||||||||||| |
|
|
| T |
19336891 |
acacaaatattagcagtagtgttccaccacaaccataagtatatccaaacaatttgtttatttcttttaaagcttatcatgattgatgaatattgtttca |
19336792 |
T |
|
| Q |
706 |
aaacgaagagaaatgtactcaccaaa |
731 |
Q |
| |
|
||| |||||||||| |||| |||||| |
|
|
| T |
19336791 |
aaaagaagagaaatatacttaccaaa |
19336766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 21 - 420
Target Start/End: Original strand, 19504142 - 19504544
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||| | ||||||||||||| || ||||||||||||| |
|
|
| T |
19504142 |
ggaatgttctcgaatattccattgcttttaagttttccgcttttccaatgcactttgccgcttttccttatgttcaattcacgttcttttggttcccata |
19504241 |
T |
|
| Q |
121 |
caagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgg |
220 |
Q |
| |
|
|||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19504242 |
caagactaaatttacctggagttggtagcgaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttga |
19504341 |
T |
|
| Q |
221 |
gatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacata |
320 |
Q |
| |
|
|||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19504342 |
gatcaaaatgtatgttggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacata |
19504441 |
T |
|
| Q |
321 |
gtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatcttgacattctattttgagcacaccagagtaatctagtg |
417 |
Q |
| |
|
||||||||||||| |||| | |||||||| |||| ||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||| |||| || |
|
|
| T |
19504442 |
gtggccacagtgtcgttggttggttgaggcgaagagtaaatgattattggtaaattcctattttgaaattctattttgagcacaccagagtagtctaatg |
19504541 |
T |
|
| Q |
418 |
ata |
420 |
Q |
| |
|
||| |
|
|
| T |
19504542 |
ata |
19504544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 20 - 719
Target Start/End: Complemental strand, 19355506 - 19354801
Alignment:
| Q |
20 |
tggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccat |
119 |
Q |
| |
|
||||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||||||||| ||| | |||||||||||||||| ||||||||||||| |
|
|
| T |
19355506 |
tggaatgttctcgaatattccattacttctaagttttccgcttttccaatgcactttgccgcttttccttatgttcaattcaccttcttttggttcccat |
19355407 |
T |
|
| Q |
120 |
tcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttg |
219 |
Q |
| |
|
|||||||||||||||||||||||| || || || ||| ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
19355406 |
tcaagactaaattcacctgaagttggtcgcgaatgagccaaccgtgaaaccaatgaccaattatgtcctgtttttcgattaacacctaacttcatcgttg |
19355307 |
T |
|
| Q |
220 |
ggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacat |
319 |
Q |
| |
|
|||||||| | ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19355306 |
ggatcaaactatctgttggatagtcaaaactctgccatagtatactctttgtcccatttgggtgaagttgttgaagcacaaagttacctgtgtctaacat |
19355207 |
T |
|
| Q |
320 |
agtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatcttgacattctattttgagcacaccagagtaatctagt |
416 |
Q |
| |
|
|||||||||||||| |||| | |||| ||| || |||||||| || ||| ||||||| |||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
19355206 |
agtggccacagtgtcgttggttggttcaggcaaataataaatgataatcggtacattcctattttgaaattctattttgagcacaccagagtagtctagt |
19355107 |
T |
|
| Q |
417 |
gataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccat--taacatcta-ttacaatcaagt----at |
509 |
Q |
| |
|
|||| ||||| |||| | || ||| | ||| |||||||||||||| | ||||||||||| ||||| ||| ||| ||| || ||||| | |
|
|
| T |
19355106 |
gatagaactgctgaa------tatatgtctatgggttgatttctatcatacatccacactactgggccatcaaaaccactacttataaccaagtgagctt |
19355013 |
T |
|
| Q |
510 |
cttctcaattca-----agacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcatt |
604 |
Q |
| |
|
|||| | ||| | ||||||||| ||||||||||||||||||| ||||||| | || ||| ||||||||||| |||||||||| |||||||| || |
|
|
| T |
19355012 |
cttcgctattgaaatatagacaatacatgccttgtttagaacataggttggaatttgcatccaatttatcacctggcctcaaactatcatttgttgcttt |
19354913 |
T |
|
| Q |
605 |
aacataaagactagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttc |
704 |
Q |
| |
|
|||| ||| ||||||||| ||||||||||||||| ||||||||| | || ||||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
19354912 |
aacacaaatgctagtagtg---ttccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatcatgattgatgaatattgttta |
19354816 |
T |
|
| Q |
705 |
aaaacgaagagaaat |
719 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
19354815 |
aaaaagaagagaaat |
19354801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 21 - 486
Target Start/End: Complemental strand, 19345201 - 19344742
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||| |||||||||||| || |||||| ||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
19345201 |
ggaatgttctcgaatattccattgctattaagttttccgcttttccaatacgctatgccgcttttcttgatgttcaattcaccttcttttggttcccatt |
19345102 |
T |
|
| Q |
121 |
caagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgg |
220 |
Q |
| |
|
|||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
19345101 |
caagactaaattcacctggagttggtagcgaaggagtcatccatgaaaccaatgaccaattatgtccagtttttcgattaactcccaacttcatcgttgg |
19345002 |
T |
|
| Q |
221 |
gatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacata |
320 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| |
|
|
| T |
19345001 |
gatcaaagtgtgatcgggataatcaaaactctgccataataaactatttgtcccatttgggtgaaattgttgaagcacaaagttacctgtgtctaatata |
19344902 |
T |
|
| Q |
321 |
gtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgata |
420 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| | ||||||||| ||||||||||||| || |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
19344901 |
gtggccaaagtgttgtttatgggttgaggtgacgagtaaatgattattggtttcctattttatgattctattttgagcacaccagaataatctagtgata |
19344802 |
T |
|
| Q |
421 |
aaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccat |
486 |
Q |
| |
|
||||| |||| | |||||||| || |||||||||||||| | ||||||||||| ||||| |
|
|
| T |
19344801 |
gaactgctgaa------tttaagtcaatggaatgatttctatcatacatccacactactgcgccat |
19344742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 21 - 434
Target Start/End: Complemental strand, 19376649 - 19376236
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| | |
|
|
| T |
19376649 |
ggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcagttcaccttgttttggttcccact |
19376550 |
T |
|
| Q |
121 |
caagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgg |
220 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||| || |||||||||||||||| |||||||||||||||||| || |||||||||||||| |
|
|
| T |
19376549 |
caagactaaattcacctgaagttgtccgcgaaggagtcaaccaggacaccaatgaccaattatatcctgtttttcgattaacgcctaacttcatcgttgg |
19376450 |
T |
|
| Q |
221 |
gatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacata |
320 |
Q |
| |
|
|||||||| || || |||||||||||||||||||| || | | |||||| |||||| || |||| ||||||||||||||||||||| |||||||| ||| |
|
|
| T |
19376449 |
gatcaaaacgtctgatggataatcaaaactctgccacaaaacagtctttgacccattgggatgaaattgttgaagcacaaagttacctgtgtctaatata |
19376350 |
T |
|
| Q |
321 |
gtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgata |
420 |
Q |
| |
|
||||||| ||||||||| | ||||||||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
19376349 |
gtggccaaagtgttgtttattggttgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagcacaccagagtagtctagtgata |
19376250 |
T |
|
| Q |
421 |
aaactgttgaatct |
434 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
19376249 |
gaactgctgaatct |
19376236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 20 - 426
Target Start/End: Complemental strand, 19287747 - 19287338
Alignment:
| Q |
20 |
tggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccat |
119 |
Q |
| |
|
||||||||||||||| | ||||||| | || ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| |
|
|
| T |
19287747 |
tggaatgttctcgaataaaccattgcgtctacgttttccgcttttccaatacactttgccgcgttgcttgatgttcaattcaccttctttaggttcccat |
19287648 |
T |
|
| Q |
120 |
tcaagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttg |
219 |
Q |
| |
|
|||||||||||| |||||||| || ||||| || ||| ||||||||||||||| |||||||||||||| |||||||| ||||| || |||||||| |||| |
|
|
| T |
19287647 |
tcaagactaaatccacctgaatttggtagcgaatgagccaaccatgaaaccaacgaccaattatgtccggtttttcggttaacacctaacttcattgttg |
19287548 |
T |
|
| Q |
220 |
ggatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacat |
319 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
19287547 |
ggatcaaagtggctgtgggataatcaaaactctgccataatatattctttgtcccatttgggtgaattttttgaagcacaaagttaccggtgtctaacat |
19287448 |
T |
|
| Q |
320 |
agtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattgg---tttcctatcttgacattctattttgagcacaccagagtaatctagt |
416 |
Q |
| |
|
|||||| ||||| || ||| | || ||||| |||| ||||||||| || || |||||||| |||| ||||||||||||||||||||||||| |||| | |
|
|
| T |
19287447 |
agtggcgacagtattattggtcggatgaggcgaagagtaaatgataatcggtaatttcctattttgagattctattttgagcacaccagagtagtctaat |
19287348 |
T |
|
| Q |
417 |
gataaaactg |
426 |
Q |
| |
|
|||| ||||| |
|
|
| T |
19287347 |
gatagaactg |
19287338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 21 - 486
Target Start/End: Complemental strand, 19404780 - 19404321
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||| ||||||||||||||| |||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||||| | |
|
|
| T |
19404780 |
ggaatattctcgaataatccatcgcttttaagttttccgcttttccaatacactttgcctcttttcttgatgttcagttcaccttgttttggttcccact |
19404681 |
T |
|
| Q |
121 |
caagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgg |
220 |
Q |
| |
|
|||||||||||| ||||||| || | || ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
19404680 |
caagactaaatttacctgaatttggccgcgaaggagttaaccatgacaccaatgaccaattatgtgctgtttttcgattaactcctaacttcatcgttgg |
19404581 |
T |
|
| Q |
221 |
gatcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacata |
320 |
Q |
| |
|
|||||||| || || || ||||||||||||||||| || | | |||||| |||||| ||||||| |||| |||||||||||||||| |||||||| ||| |
|
|
| T |
19404580 |
gatcaaaacgtctgatgggtaatcaaaactctgccacaacacagtctttgacccattggggtgaaattgtcgaagcacaaagttacctgtgtctaatata |
19404481 |
T |
|
| Q |
321 |
gtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgata |
420 |
Q |
| |
|
|| |||| ||||||||| ||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
19404480 |
gtagccaaagtgttgtttatgggttgaggtgaagaataaatgataattggtttcctactttgtgattctattttgagcacaccggagtagtctagcgata |
19404381 |
T |
|
| Q |
421 |
aaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccat |
486 |
Q |
| |
|
||||| |||| |||||||||| || |||||||||||||| | ||| ||||||| ||||| |
|
|
| T |
19404380 |
gaactgctgaa------tctaagtcaatggaatgatttctatcatacatccatactactgcgccat |
19404321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 22 - 486
Target Start/End: Original strand, 19172901 - 19173356
Alignment:
| Q |
22 |
gaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccattc |
121 |
Q |
| |
|
||||||||| ||| | ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
19172901 |
gaatgttcttgaataatccattgctgttaagttttccgcttttccaatacactttgccgcgttgcttgatgttcaattcaccttccattggttcccattc |
19173000 |
T |
|
| Q |
122 |
aagactaaattcacctgaagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttggg |
221 |
Q |
| |
|
|| ||||||| |||||||| | ||||| |||||| |||||| ||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||| |
|
|
| T |
19173001 |
aacactaaatccacctgaattcggtagcgaaggagccaaccacgaaaccaatgaccaattatgtccggtttttcggttaacacctaacttcatcgttggg |
19173100 |
T |
|
| Q |
222 |
atcaaaaagtttgtgggataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatag |
321 |
Q |
| |
|
|||||| | || |||||||||||||||||||||||||||||||||||||||| || |||| || |||| |||||||||||||||| |||||||| |||| |
|
|
| T |
19173101 |
atcaaagtggttatgggataatcaaaactctgccataatatactctttgtcccgttggggtaaatttgtcgaagcacaaagttacctgtgtctaatatag |
19173200 |
T |
|
| Q |
322 |
tggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataa |
421 |
Q |
| |
|
|||||| || |||| ||||||||||||||| | | ||||| ||||||||||||| ||| ||| |||||||||||||||||| ||||||||||| | |
|
|
| T |
19173201 |
tggccaaag---tgtttatgggttgaggtgaagagcatatgattattggtttcctattttgtgattgtattttgagcacaccagaataatctagtgaaag |
19173297 |
T |
|
| Q |
422 |
aactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccat |
486 |
Q |
| |
|
||||| |||| | |||||||| || |||||||||||||| | ||||||||||| ||||| |
|
|
| T |
19173298 |
aactgctgaa------tttaagtcaatggaatgatttctatcatacatccacactactgcgccat |
19173356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 164 - 426
Target Start/End: Original strand, 19469728 - 19469993
Alignment:
| Q |
164 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
263 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| | || |||||||||||| |||||||||||||||||| |
|
|
| T |
19469728 |
tgaaaccaatgaccatttatgtccagtttttcgattaactcccaacttcatcattgggatcaatacgtctgtgggataatcgaaactctgccataatata |
19469827 |
T |
|
| Q |
264 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
363 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19469828 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatga |
19469927 |
T |
|
| Q |
364 |
tcattgg---tttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactg |
426 |
Q |
| |
|
| ||||| |||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
19469928 |
ttattggtaatttcctattttgagattctattttgagcacaccagagtagtctagtaataaaactg |
19469993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 164 - 426
Target Start/End: Original strand, 19540652 - 19540917
Alignment:
| Q |
164 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
263 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| | || |||||||||||| |||||||||||||||||| |
|
|
| T |
19540652 |
tgaaaccaatgaccatttatgtccagtttttcgattaactcccaacttcatcattgggatcaatacgtctgtgggataatcgaaactctgccataatata |
19540751 |
T |
|
| Q |
264 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
363 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19540752 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatga |
19540851 |
T |
|
| Q |
364 |
tcattgg---tttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactg |
426 |
Q |
| |
|
| ||||| |||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
19540852 |
ttattggtaatttcctattttgagattctattttgagcacaccagagtagtctagtaataaaactg |
19540917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 164 - 426
Target Start/End: Complemental strand, 19592046 - 19591781
Alignment:
| Q |
164 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
263 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| | || |||||||||||| |||||||||||||||||| |
|
|
| T |
19592046 |
tgaaaccaatgaccatttatgtccagtttttcgattaactcccaacttcatcattgggatcaatacgtctgtgggataatcgaaactctgccataatata |
19591947 |
T |
|
| Q |
264 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
363 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19591946 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatga |
19591847 |
T |
|
| Q |
364 |
tcattgg---tttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactg |
426 |
Q |
| |
|
| ||||| |||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
19591846 |
ttattggtaatttcctattttgagattctattttgagcacaccagagtagtctagtaataaaactg |
19591781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 145 - 432
Target Start/End: Complemental strand, 19448422 - 19448135
Alignment:
| Q |
145 |
gtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatc |
244 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| || || |||||||| |
|
|
| T |
19448422 |
gtagcgaaggagtcaaccatgacaccaatgaccaattatgtcctgttttttgattaacgcctaacttcatcgttgggatcaaaacgtctgatggataatc |
19448323 |
T |
|
| Q |
245 |
aaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggt |
344 |
Q |
| |
|
|||||||||||| || | | |||||| |||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||| |
|
|
| T |
19448322 |
aaaactctgccacaacacagtctttgacccattggggtgaaattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttatgggt |
19448223 |
T |
|
| Q |
345 |
tgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactgttgaat |
432 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||| ||||| |
|
|
| T |
19448222 |
tgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagcacaccagaataatctagtgatagaactgctgaat |
19448135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 145 - 432
Target Start/End: Original strand, 19532654 - 19532941
Alignment:
| Q |
145 |
gtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatc |
244 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| || || |||||||| |
|
|
| T |
19532654 |
gtagcgaaggagtcaaccatgacaccaatgaccaattatgtcctgttttttgattaacgcctaacttcatcgttgggatcaaaacgtctgatggataatc |
19532753 |
T |
|
| Q |
245 |
aaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggt |
344 |
Q |
| |
|
|||||||||||| || | | |||||| |||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||| |
|
|
| T |
19532754 |
aaaactctgccacaacacagtctttgacccattggggtgaaattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttatgggt |
19532853 |
T |
|
| Q |
345 |
tgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactgttgaat |
432 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||||| ||||| |
|
|
| T |
19532854 |
tgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagcacaccagaataatctagtgatagaactgctgaat |
19532941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 164 - 426
Target Start/End: Complemental strand, 19410696 - 19410434
Alignment:
| Q |
164 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
263 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| || || |||||||||||||||||||| || | | |
|
|
| T |
19410696 |
tgaaaccaatgaccaattatgtcctgtttttcgattaacgcctaacttcatcattgggatcaaaacgtctgatggataatcaaaactctgccacaacaca |
19410597 |
T |
|
| Q |
264 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
363 |
Q |
| |
|
||| ||| || || || ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19410596 |
ctcattgagccgttgggaagaaattgttgaagcacaaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatga |
19410497 |
T |
|
| Q |
364 |
tcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactg |
426 |
Q |
| |
|
| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
19410496 |
ttattggtttcctattttgagattctattttgagcacaccagagtagtctagtgatagaactg |
19410434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 164 - 426
Target Start/End: Complemental strand, 19457715 - 19457453
Alignment:
| Q |
164 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
263 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| || || |||||||||||||||||||| || | | |
|
|
| T |
19457715 |
tgaaaccaatgaccaattatgtcctgtttttcgattaacgcctaacttcatcattgggatcaaaacgtctgatggataatcaaaactctgccacaacaca |
19457616 |
T |
|
| Q |
264 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
363 |
Q |
| |
|
||| ||| || || || ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19457615 |
ctcattgagccgttgggaagaaattgttgaagcacaaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatga |
19457516 |
T |
|
| Q |
364 |
tcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactg |
426 |
Q |
| |
|
| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
19457515 |
ttattggtttcctattttgagattctattttgagcacaccagagtagtctagtgatagaactg |
19457453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 164 - 426
Target Start/End: Original strand, 19523363 - 19523625
Alignment:
| Q |
164 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
263 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| || || |||||||||||||||||||| || | | |
|
|
| T |
19523363 |
tgaaaccaatgaccaattatgtcctgtttttcgattaacgcctaacttcatcattgggatcaaaacgtctgatggataatcaaaactctgccacaacaca |
19523462 |
T |
|
| Q |
264 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
363 |
Q |
| |
|
||| ||| || || || ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| |||||||| |
|
|
| T |
19523463 |
ctcattgagccgttgggaagaaattgttgaagcacaaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatga |
19523562 |
T |
|
| Q |
364 |
tcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactg |
426 |
Q |
| |
|
| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
19523563 |
ttattggtttcctattttgagattctattttgagcacaccagagtagtctagtgatagaactg |
19523625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 522 - 747
Target Start/End: Complemental strand, 19344679 - 19344454
Alignment:
| Q |
522 |
agacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtag |
621 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||| |||||| |
|
|
| T |
19344679 |
agacaatacttgccttgtttagaacatagcttggatttggaattcaatgtatcacctggcttcaaactatcatttgttgcattaacacaaatgttagtag |
19344580 |
T |
|
| Q |
622 |
tggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaatgt |
721 |
Q |
| |
|
||| ||||||||||||||||||||||||| | || |||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| | |
|
|
| T |
19344579 |
aagtaatccaccacaaccataagtatatcaatacaacttgtttctttatcttaaagcttatcatgatcgatgaatattgtttcaaaaagaagagaaatat |
19344480 |
T |
|
| Q |
722 |
actcaccaaacccgaaggagaataat |
747 |
Q |
| |
|
||| | | |||||||||||||||||| |
|
|
| T |
19344479 |
acttatcgaacccgaaggagaataat |
19344454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 164 - 486
Target Start/End: Original strand, 19468792 - 19469108
Alignment:
| Q |
164 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||| | |||| || ||||||||||||||||||||| || | | |
|
|
| T |
19468792 |
tgaaaccaatgaccaattatgtcctgttttccgattaacgcctaacttcatcgttggaaccaaagtgtcatcgggataatcaaaactctgccacaacaca |
19468891 |
T |
|
| Q |
264 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
363 |
Q |
| |
|
||| ||| ||||| || |||| |||| |||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||| |||||||| |
|
|
| T |
19468892 |
ctcattgagccattgggatgaaattgtcgaagcacaaagttacctgtgtctaatatagtggccatagtgttgtttatgggttgaggtgaagagtaaatga |
19468991 |
T |
|
| Q |
364 |
tcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactgttgaatcttcttctaagtcaaaggggtgatttctatc |
463 |
Q |
| |
|
| ||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||| ||||| |||| | |||||||| || |||||| |||| |
|
|
| T |
19468992 |
ttattggtttcctattttgtgattctattttgagcacaccagagtagtctaatgatagaactgctgaa------tttaagtcaatggaatgatttatatc |
19469085 |
T |
|
| Q |
464 |
ataaaaccacactactgtgccat |
486 |
Q |
| |
|
||| | ||||||||||||||||| |
|
|
| T |
19469086 |
atacatccacactactgtgccat |
19469108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 164 - 432
Target Start/End: Original strand, 19555713 - 19555981
Alignment:
| Q |
164 |
tgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccataatata |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||| | |||| || ||||||||||||||||||||| || | | |
|
|
| T |
19555713 |
tgaaaccaatgaccaattatgtcctgttttccgattaacgcctaacttcatcgttggaaccaaagtgtcatcgggataatcaaaactctgccacaacaca |
19555812 |
T |
|
| Q |
264 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatga |
363 |
Q |
| |
|
||| ||| ||||| || |||| |||| |||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||| |||||||| |
|
|
| T |
19555813 |
ctcattgagccattgggatgaaattgtcgaagcacaaagttacctgtgtctaatatagtggccatagtgttgtttatgggttgaggtgaagagtaaatga |
19555912 |
T |
|
| Q |
364 |
tcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactgttgaat |
432 |
Q |
| |
|
| ||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||| ||||| ||||| |
|
|
| T |
19555913 |
ttattggtttcctattttgtgattctattttgagcacaccagagtagtctaatgatagaactgctgaat |
19555981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 522 - 688
Target Start/End: Original strand, 19504652 - 19504818
Alignment:
| Q |
522 |
agacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtag |
621 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| || ||| |||||||| |
|
|
| T |
19504652 |
agacaatacttgtcttgtttagaacatagcgtggaattggaattcaatgtatcacctggcttcaaactatctttcgttgcattaccacaaatactagtag |
19504751 |
T |
|
| Q |
622 |
tggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgat |
688 |
Q |
| |
|
| ||||||||||||||||||||||||||||| | || ||||||||||||| || ||||||||||| |
|
|
| T |
19504752 |
tagtactccaccacaaccataagtatatcaatacaacttgtttctttatttcgaaacttatcatgat |
19504818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 524 - 746
Target Start/End: Complemental strand, 19489664 - 19489443
Alignment:
| Q |
524 |
acaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtg |
623 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| ||| || | | |||||||||||||||||||||||| |||||||||||||| ||| ||| ||||| |
|
|
| T |
19489664 |
acaatacttgccttgtttggaacatagcttggatttgtaagtcactgtatcacctggcttcaaactatcacttgttgcattaacacaaatactcgtagta |
19489565 |
T |
|
| Q |
624 |
gtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaatgtac |
723 |
Q |
| |
|
||| || |||||||||| ||| ||||||||| | | |||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||| ||| |
|
|
| T |
19489564 |
gtattc-accacaaccaaaagcatatcaaaacagtctgtttctttattttaaagcttatcatgattgctgagtattgtttcaaaatgaagagaaatatac |
19489466 |
T |
|
| Q |
724 |
tcaccaaacccgaaggagaataa |
746 |
Q |
| |
|
||||||||||| |||||| |||| |
|
|
| T |
19489465 |
tcaccaaaccccaaggagtataa |
19489443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 516 - 703
Target Start/End: Original strand, 19470107 - 19470294
Alignment:
| Q |
516 |
aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac |
615 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
19470107 |
aattgaagacaaaacttgccttgtttagaacatagcttggatttggaattcaatgtatcacctggcttcaaactatcatttgttgcattaacacaaatgt |
19470206 |
T |
|
| Q |
616 |
tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgttt |
703 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||| | || ||||||||| ||| ||||||||||||| | ||||||||||||| |
|
|
| T |
19470207 |
tagtagaagtaatccaccacaaccataagtatatcaatacaacttgtttcttgatttcaaagcttatcatgtttgatgaatattgttt |
19470294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 516 - 703
Target Start/End: Original strand, 19541031 - 19541218
Alignment:
| Q |
516 |
aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac |
615 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
19541031 |
aattgaagacaaaacttgccttgtttagaacatagcttggatttggaattcaatgtatcacctggcttcaaactatcatttgttgcattaacacaaatgt |
19541130 |
T |
|
| Q |
616 |
tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgttt |
703 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||| | || ||||||||| ||| ||||||||||||| | ||||||||||||| |
|
|
| T |
19541131 |
tagtagaagtaatccaccacaaccataagtatatcaatacaacttgtttcttgatttcaaagcttatcatgtttgatgaatattgttt |
19541218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 516 - 703
Target Start/End: Complemental strand, 19591667 - 19591480
Alignment:
| Q |
516 |
aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac |
615 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
19591667 |
aattgaagacaaaacttgccttgtttagaacatagcttggatttggaattcaatgtatcacctggcttcaaactatcatttgttgcattaacacaaatgt |
19591568 |
T |
|
| Q |
616 |
tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgttt |
703 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||| | || ||||||||| ||| ||||||||||||| | ||||||||||||| |
|
|
| T |
19591567 |
tagtagaagtaatccaccacaaccataagtatatcaatacaacttgtttcttgatttcaaagcttatcatgtttgatgaatattgttt |
19591480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 521 - 706
Target Start/End: Original strand, 19458413 - 19458598
Alignment:
| Q |
521 |
aagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagta |
620 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| | |||| ||| | ||| | |
|
|
| T |
19458413 |
aagacaaaacttgccttgtttagaacatagcgtggaattggaattcaatgtatcacctggcttcaaactatcacgttttgcttcaacacaaatattagca |
19458512 |
T |
|
| Q |
621 |
gtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaa |
706 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||| | || ||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
19458513 |
gtagtaatccaccacaaccataagtatatcaatacaacttgtttctttatttccaagcttatcatgattgatgaatattgtttcaa |
19458598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 521 - 706
Target Start/End: Original strand, 19556091 - 19556276
Alignment:
| Q |
521 |
aagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagta |
620 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| | |||| ||| | ||| | |
|
|
| T |
19556091 |
aagacaaaacttgccttgtttagaacatagcgtggaattggaattcaatgtatcacctggcttcaaactatcacgttttgcttcaacacaaatattagca |
19556190 |
T |
|
| Q |
621 |
gtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaa |
706 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||| | || ||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
19556191 |
gtagtaatccaccacaaccataagtatatcaatacaacttgtttctttatttccaagcttatcatgattgatgaatattgtttcaa |
19556276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 268 - 426
Target Start/End: Complemental strand, 19489886 - 19489728
Alignment:
| Q |
268 |
ttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcat |
367 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||| ||||||||| ||| ||||||||| || |
|
|
| T |
19489886 |
ttgtcccatttgggtgaagttgttgaatcaccaagttaccggtgtctaacatagtggccaccgtgttgttggtgggttgagttgacaagtaaatgattat |
19489787 |
T |
|
| Q |
368 |
tggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactg |
426 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
19489786 |
tggtttcctattttgtgattctattttgagcgcaccagagtaggctagtgataaaactg |
19489728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 516 - 719
Target Start/End: Complemental strand, 19410323 - 19410120
Alignment:
| Q |
516 |
aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac |
615 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| |||| ||| |||| ||| |||||||||||||||||||||| ||||||| | |||| ||| | |
|
|
| T |
19410323 |
aattgaagacaaaacttgccttgtttagaacatagcttggatttgtaattcaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatat |
19410224 |
T |
|
| Q |
616 |
tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagag |
715 |
Q |
| |
|
||| ||| || ||||||||||||||| ||||||||| | || ||||||||||||| |||||||||||| || ||||||||||||||||| |||||| |
|
|
| T |
19410223 |
tagcagtagtgttccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatcatcattgttgaatattgtttcaaaaagaagag |
19410124 |
T |
|
| Q |
716 |
aaat |
719 |
Q |
| |
|
|||| |
|
|
| T |
19410123 |
aaat |
19410120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 516 - 719
Target Start/End: Complemental strand, 19457342 - 19457139
Alignment:
| Q |
516 |
aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac |
615 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| |||| ||| |||| ||| |||||||||||||||||||||| ||||||| | |||| ||| | |
|
|
| T |
19457342 |
aattgaagacaaaacttgccttgtttagaacatagcttggatttgtaattcaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatat |
19457243 |
T |
|
| Q |
616 |
tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagag |
715 |
Q |
| |
|
||| ||| || ||||||||||||||| ||||||||| | || ||||||||||||| |||||||||||| || ||||||||||||||||| |||||| |
|
|
| T |
19457242 |
tagcagtagtgttccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatcatcattgttgaatattgtttcaaaaagaagag |
19457143 |
T |
|
| Q |
716 |
aaat |
719 |
Q |
| |
|
|||| |
|
|
| T |
19457142 |
aaat |
19457139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 516 - 719
Target Start/End: Original strand, 19523736 - 19523939
Alignment:
| Q |
516 |
aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac |
615 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| |||| ||| |||| ||| |||||||||||||||||||||| ||||||| | |||| ||| | |
|
|
| T |
19523736 |
aattgaagacaaaacttgccttgtttagaacatagcttggatttgtaattcaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatat |
19523835 |
T |
|
| Q |
616 |
tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagag |
715 |
Q |
| |
|
||| ||| || ||||||||||||||| ||||||||| | || ||||||||||||| |||||||||||| || ||||||||||||||||| |||||| |
|
|
| T |
19523836 |
tagcagtagtgttccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatcatcattgttgaatattgtttcaaaaagaagag |
19523935 |
T |
|
| Q |
716 |
aaat |
719 |
Q |
| |
|
|||| |
|
|
| T |
19523936 |
aaat |
19523939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 19410812 - 19410701
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19410812 |
ggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaattcaccttgttttggttcccatt |
19410713 |
T |
|
| Q |
121 |
caagactaaatt |
132 |
Q |
| |
|
||||| |||||| |
|
|
| T |
19410712 |
caagattaaatt |
19410701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 19457831 - 19457720
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19457831 |
ggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaattcaccttgttttggttcccatt |
19457732 |
T |
|
| Q |
121 |
caagactaaatt |
132 |
Q |
| |
|
||||| |||||| |
|
|
| T |
19457731 |
caagattaaatt |
19457720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 19523247 - 19523358
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19523247 |
ggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaattcaccttgttttggttcccatt |
19523346 |
T |
|
| Q |
121 |
caagactaaatt |
132 |
Q |
| |
|
||||| |||||| |
|
|
| T |
19523347 |
caagattaaatt |
19523358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 529 - 719
Target Start/End: Complemental strand, 19376120 - 19375930
Alignment:
| Q |
529 |
acttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtggtact |
628 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| | || |||| |||||||||||||||||||||| ||||||| | |||| ||| | ||| ||| || | |
|
|
| T |
19376120 |
acttgccttgttttgaatatagcgtggaatttgcatcaaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatattagcagtagtgtt |
19376021 |
T |
|
| Q |
629 |
ccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaat |
719 |
Q |
| |
|
|||||||||||||| ||||||||| | || ||||||||||||| |||||||||||| || |||||||||||||||||| |||||||||| |
|
|
| T |
19376020 |
ccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatcatcattgatgaatattgtttcaaaaagaagagaaat |
19375930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 522 - 697
Target Start/End: Original strand, 19173419 - 19173597
Alignment:
| Q |
522 |
agacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagt-- |
619 |
Q |
| |
|
|||||| ||||||||||||||||||||| | |||| || ||||| |||||||||||||||||||||||||| ||||||| |||||| ||| | |||| |
|
|
| T |
19173419 |
agacaaaacttgccttgtttagaacataacttggatttcgaattcaatgtatcacctggcttcaaactatcacttgttgctttaacacaaatattagtag |
19173518 |
T |
|
| Q |
620 |
-agtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaata |
697 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
19173519 |
cagttgtattccaccacaaccataagtatatcaatacaacttgtttctttatttcaaagcttatcatgattgatgaata |
19173597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 19468676 - 19468795
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||| | |
|
|
| T |
19468676 |
ggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgatcaattcaccttgttttggttcccaat |
19468775 |
T |
|
| Q |
121 |
caagactaaattcacctgaa |
140 |
Q |
| |
|
| ||| |||||||||||||| |
|
|
| T |
19468776 |
ctagattaaattcacctgaa |
19468795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #38
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 19555597 - 19555716
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||| | |
|
|
| T |
19555597 |
ggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgatcaattcaccttgttttggttcccaat |
19555696 |
T |
|
| Q |
121 |
caagactaaattcacctgaa |
140 |
Q |
| |
|
| ||| |||||||||||||| |
|
|
| T |
19555697 |
ctagattaaattcacctgaa |
19555716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #39
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 628 - 747
Target Start/End: Complemental strand, 19373581 - 19373462
Alignment:
| Q |
628 |
tccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaatgtactcac |
727 |
Q |
| |
|
||||||||||||||||||||||||| | || |||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| |||| | |
|
|
| T |
19373581 |
tccaccacaaccataagtatatcaatacaacttgtttctttatcttaaagcttatcatgatcgatgaatattgtttcaaaaagaagagaaatatactgat |
19373482 |
T |
|
| Q |
728 |
caaacccgaaggagaataat |
747 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
19373481 |
cgaacccgaaggagaataat |
19373462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #40
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 524 - 719
Target Start/End: Complemental strand, 19404256 - 19404064
Alignment:
| Q |
524 |
acaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtg |
623 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||| | || ||| |||||||||||||||||||||| ||| |||| |||||| ||| ||||| ||| |
|
|
| T |
19404256 |
acaatacttaccttgtttagaacataggttggaatttgcatccaatttatcacctggcttcaaactatcatttattgctttaacacaaatgctagtcgtg |
19404157 |
T |
|
| Q |
624 |
gtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaat |
719 |
Q |
| |
|
| |||||||||||||| ||||||||| | || ||||||||||||| ||| |||||||| || |||||||||||||||||| |||||||||| |
|
|
| T |
19404156 |
tt---ccaccacaaccataggtatatcaatacaacttgtttctttatttcaaaacttatcatcattgatgaatattgtttcaaaaagaagagaaat |
19404064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #41
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 524 - 719
Target Start/End: Complemental strand, 19448041 - 19447846
Alignment:
| Q |
524 |
acaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtg |
623 |
Q |
| |
|
|||| ||||||||||||| ||| ||||||||||||| | || |||| |||||||||||||||||||||| ||||||| | |||| ||| | ||| | |
|
|
| T |
19448041 |
acaaaacttgccttgttttgaatatagcgtggaatttgcatcaaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatattagcaaca |
19447942 |
T |
|
| Q |
624 |
gtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaat |
719 |
Q |
| |
|
|| ||||||||||||||| ||||||||| | | ||||||||||||| ||||||||||||||| ||||||||| |||||||| |||||||||| |
|
|
| T |
19447941 |
gtgttccaccacaaccataggtatatcaatagatcttgtttctttatttcaaagcttatcatgattcatgaatattttttcaaaaagaagagaaat |
19447846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 19469612 - 19469723
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||| ||||||| |||||| |
|
|
| T |
19469612 |
ggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaattctccttcttttggtccccatt |
19469711 |
T |
|
| Q |
121 |
caagactaaatt |
132 |
Q |
| |
|
||||| |||||| |
|
|
| T |
19469712 |
caagattaaatt |
19469723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #43
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 524 - 719
Target Start/End: Original strand, 19533035 - 19533230
Alignment:
| Q |
524 |
acaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtg |
623 |
Q |
| |
|
|||| ||||||||||||| ||| ||||||||||||| | || |||| |||||||||||||||||||||| ||||||| | |||| ||| | ||| | |
|
|
| T |
19533035 |
acaaaacttgccttgttttgaatatagcgtggaatttgcatcaaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatattagcaaca |
19533134 |
T |
|
| Q |
624 |
gtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaat |
719 |
Q |
| |
|
|| ||||||||||||||| ||||||||| | | ||||||||||||| ||||||||||||||| ||||||||| |||||||| |||||||||| |
|
|
| T |
19533135 |
gtgttccaccacaaccataggtatatcaatagatcttgtttctttatttcaaagcttatcatgattcatgaatattttttcaaaaagaagagaaat |
19533230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #44
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 19540536 - 19540647
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||| ||||||| |||||| |
|
|
| T |
19540536 |
ggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaattctccttcttttggtccccatt |
19540635 |
T |
|
| Q |
121 |
caagactaaatt |
132 |
Q |
| |
|
||||| |||||| |
|
|
| T |
19540636 |
caagattaaatt |
19540647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #45
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 19592162 - 19592051
Alignment:
| Q |
21 |
ggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccatt |
120 |
Q |
| |
|
||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||| ||||||| |||||| |
|
|
| T |
19592162 |
ggaatattctcgaataatccattgcttttaagttttccgcttttccaatacactttgccgcttttcttgatgttcaattctccttcttttggtccccatt |
19592063 |
T |
|
| Q |
121 |
caagactaaatt |
132 |
Q |
| |
|
||||| |||||| |
|
|
| T |
19592062 |
caagattaaatt |
19592051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 19370993 - 19370913
Alignment:
| Q |
20 |
tggaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc |
100 |
Q |
| |
|
||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||| |||| || ||||||||||| |
|
|
| T |
19370993 |
tggaatgttctcgaataatccattgcttctaagttttccacttttccaatgcactttgccttgtttcttaatgttcaattc |
19370913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 340 - 432
Target Start/End: Original strand, 19468140 - 19468231
Alignment:
| Q |
340 |
tgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactgttgaat |
432 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||| || ||| ||||||||||||||||||||||||| |||| ||||| ||||| ||||| |
|
|
| T |
19468140 |
tgggttgaggtgaagagtaaatgattattggtttcc-attttgtgattctattttgagcacaccagagtagtctaatgatagaactgctgaat |
19468231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 19341211 - 19341133
Alignment:
| Q |
22 |
gaatgttctcgaacattccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattc |
100 |
Q |
| |
|
||||||||||||| | |||||||||| |||||||||||||||||||| ||||||||| |||| || ||||||||||| |
|
|
| T |
19341211 |
gaatgttctcgaataatccattgcttccaagttttccacttttccaatgcactttgccttgtttcttaatgttcaattc |
19341133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 521 - 565
Target Start/End: Original strand, 19468341 - 19468385
Alignment:
| Q |
521 |
aagacaatacttgccttgtttagaacatagcgtggaattggaatt |
565 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19468341 |
aagacaaaacttgccttgtttagaacatagcgtggaattggaatt |
19468385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 385 - 432
Target Start/End: Complemental strand, 19185115 - 19185068
Alignment:
| Q |
385 |
attctattttgagcacaccagagtaatctagtgataaaactgttgaat |
432 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| ||||| ||||| |
|
|
| T |
19185115 |
attctattttgagcacaccagagtagtctagtgatagaactgctgaat |
19185068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 565
Target Start/End: Original strand, 19469168 - 19469217
Alignment:
| Q |
516 |
aattcaagacaatacttgccttgtttagaacatagcgtggaattggaatt |
565 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
19469168 |
aattgaagacaaaacttgccttgtttagaacatagcttggatttggaatt |
19469217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 16004341 - 16004306
Alignment:
| Q |
385 |
attctattttgagcacaccagagtaatctagtgata |
420 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16004341 |
attctattttgagcacaccagagtagtctagtgata |
16004306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 19458256 - 19458303
Alignment:
| Q |
385 |
attctattttgagcacaccagagtaatctagtgataaaactgttgaat |
432 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||| ||||| ||||| |
|
|
| T |
19458256 |
attctattttgagcacaccagagtagtctaatgatagaactgctgaat |
19458303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 118; Significance: 8e-60; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 39 - 316
Target Start/End: Complemental strand, 19543080 - 19542803
Alignment:
| Q |
39 |
ccattgcttttaagttttccacttttccaatacactttgccgcgttttttgatgttcaattcaccttgttttggttcccattcaagactaaattcacctg |
138 |
Q |
| |
|
||||| ||| |||||||||| |||||||||||||||||||||| ||| ||||| | |||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19543080 |
ccatttcttctaagttttccgcttttccaatacactttgccgcttttcttgatttccaattcacgttgctttggttcccattcaagactaaattcacctg |
19542981 |
T |
|
| Q |
139 |
aagtttgtagcaaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtggg |
238 |
Q |
| |
|
||||| |||| ||||||||| ||||||||| || |||||||||||||| ||| |||| |||| || ||||||||| |||| ||| || ||| | | | |
|
|
| T |
19542980 |
aagttgatagcgaaggagtcatccatgaaactaaagaccaattatgtccggttattcggttaatacctaacttcatcattggaatccaacagtgtaagag |
19542881 |
T |
|
| Q |
239 |
ataatcaaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaa |
316 |
Q |
| |
|
|| |||||||||||||||||| | ||| ||| ||||| ||||||| ||||||||| ||||||||||| |||||||| |
|
|
| T |
19542880 |
atgatcaaaactctgccataaaacacttgttgaaccattggggtgaaattgttgaagaacaaagttaccggtgtctaa |
19542803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University