View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4699_low_10 (Length: 255)

Name: NF4699_low_10
Description: NF4699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4699_low_10
NF4699_low_10
[»] chr3 (29 HSPs)
chr3 (90-156)||(8126196-8126263)
chr3 (101-164)||(54680567-54680630)
chr3 (102-164)||(26770800-26770862)
chr3 (102-164)||(53717976-53718038)
chr3 (91-151)||(54726122-54726183)
chr3 (102-154)||(44435183-44435235)
chr3 (103-158)||(16294803-16294858)
chr3 (102-160)||(32827431-32827489)
chr3 (102-164)||(47900328-47900390)
chr3 (88-156)||(22995703-22995772)
chr3 (102-151)||(22995775-22995824)
chr3 (102-151)||(54726067-54726116)
chr3 (101-165)||(32833678-32833742)
chr3 (108-156)||(32998553-32998601)
chr3 (108-156)||(34205570-34205618)
chr3 (108-156)||(34300962-34301010)
chr3 (108-156)||(50623121-50623169)
chr3 (102-149)||(17072617-17072664)
chr3 (102-156)||(26770717-26770772)
chr3 (102-156)||(7933597-7933651)
chr3 (102-156)||(8126137-8126191)
chr3 (102-152)||(39333301-39333351)
chr3 (102-156)||(44435253-44435307)
chr3 (88-164)||(23005014-23005091)
chr3 (102-151)||(34935550-34935599)
chr3 (102-150)||(1044002-1044050)
chr3 (104-156)||(7672700-7672752)
chr3 (108-164)||(39289646-39289702)
chr3 (110-154)||(53717906-53717950)
[»] scaffold0340 (1 HSPs)
scaffold0340 (91-164)||(14100-14174)
[»] chr5 (44 HSPs)
chr5 (90-171)||(14416472-14416553)
chr5 (102-164)||(23994946-23995008)
chr5 (102-164)||(34148019-34148081)
chr5 (102-156)||(38283471-38283525)
chr5 (111-156)||(30489103-30489148)
chr5 (102-165)||(14416404-14416467)
chr5 (90-156)||(26168254-26168321)
chr5 (102-152)||(1723254-1723304)
chr5 (102-148)||(9984936-9984982)
chr5 (102-156)||(15966035-15966089)
chr5 (102-156)||(19784541-19784595)
chr5 (102-156)||(19784602-19784656)
chr5 (102-156)||(33696734-33696788)
chr5 (102-156)||(35245598-35245652)
chr5 (102-164)||(39602983-39603045)
chr5 (102-151)||(18942065-18942114)
chr5 (90-154)||(21152597-21152662)
chr5 (90-154)||(21159732-21159797)
chr5 (90-154)||(21163539-21163604)
chr5 (104-151)||(1723324-1723371)
chr5 (90-156)||(7336921-7336988)
chr5 (102-161)||(7581464-7581523)
chr5 (108-151)||(13420519-13420562)
chr5 (102-153)||(30489175-30489226)
chr5 (90-164)||(39916351-39916426)
chr5 (90-164)||(43340481-43340556)
chr5 (102-156)||(566372-566426)
chr5 (102-164)||(6168758-6168820)
chr5 (102-164)||(8408790-8408852)
chr5 (102-156)||(14571015-14571069)
chr5 (102-164)||(15385817-15385879)
chr5 (102-156)||(15965963-15966017)
chr5 (102-148)||(16985340-16985386)
chr5 (102-164)||(31758867-31758929)
chr5 (101-151)||(34102087-34102137)
chr5 (101-151)||(35067931-35067981)
chr5 (102-152)||(35245687-35245737)
chr5 (87-160)||(40208540-40208614)
chr5 (102-151)||(22584311-22584360)
chr5 (104-156)||(8409626-8409678)
chr5 (88-151)||(15577531-15577595)
chr5 (196-248)||(18626016-18626067)
chr5 (108-148)||(29112299-29112339)
chr5 (102-154)||(38860809-38860861)
[»] chr4 (41 HSPs)
chr4 (102-164)||(29978491-29978553)
chr4 (102-164)||(49745542-49745604)
chr4 (90-156)||(17028240-17028307)
chr4 (90-164)||(48079515-48079590)
chr4 (90-151)||(5048447-5048509)
chr4 (102-164)||(12721725-12721787)
chr4 (102-160)||(23754271-23754329)
chr4 (102-164)||(32112313-32112375)
chr4 (108-164)||(37306830-37306886)
chr4 (90-164)||(23329369-23329444)
chr4 (108-151)||(39754184-39754227)
chr4 (102-156)||(12721652-12721706)
chr4 (102-156)||(17659472-17659526)
chr4 (102-156)||(25856089-25856143)
chr4 (102-160)||(26206673-26206731)
chr4 (102-156)||(41788928-41788982)
chr4 (87-164)||(52256741-52256819)
chr4 (102-152)||(52256821-52256871)
chr4 (102-155)||(13743866-13743919)
chr4 (90-154)||(13743924-13743989)
chr4 (88-164)||(43635900-43635977)
chr4 (102-151)||(46779373-46779422)
chr4 (102-154)||(17659544-17659596)
chr4 (102-154)||(30279219-30279271)
chr4 (88-151)||(46996538-46996602)
chr4 (102-154)||(51126184-51126236)
chr4 (102-169)||(15133822-15133888)
chr4 (102-165)||(17028312-17028375)
chr4 (102-161)||(19754217-19754276)
chr4 (102-161)||(19785530-19785589)
chr4 (109-160)||(44496811-44496862)
chr4 (101-156)||(48042669-48042724)
chr4 (101-156)||(56420509-56420564)
chr4 (102-160)||(38675218-38675276)
chr4 (102-152)||(51126116-51126166)
chr4 (101-162)||(24331426-24331487)
chr4 (88-156)||(39754106-39754175)
chr4 (103-156)||(44495751-44495804)
chr4 (102-151)||(44639758-44639807)
chr4 (102-154)||(25856019-25856071)
chr4 (108-164)||(30051342-30051398)
[»] chr7 (32 HSPs)
chr7 (100-164)||(18941388-18941452)
chr7 (90-156)||(28003244-28003311)
chr7 (102-157)||(46221157-46221212)
chr7 (102-160)||(35593720-35593778)
chr7 (90-154)||(19532019-19532084)
chr7 (101-154)||(31601257-31601310)
chr7 (108-164)||(24211636-24211692)
chr7 (90-169)||(46477128-46477207)
chr7 (102-165)||(8379135-8379198)
chr7 (102-156)||(19531960-19532014)
chr7 (102-152)||(27940756-27940806)
chr7 (102-156)||(27940824-27940878)
chr7 (102-156)||(33471569-33471623)
chr7 (102-164)||(43067023-43067085)
chr7 (107-156)||(18941341-18941390)
chr7 (102-154)||(33471499-33471551)
chr7 (102-154)||(37066191-37066243)
chr7 (90-164)||(17882707-17882782)
chr7 (90-156)||(27942391-27942458)
chr7 (102-165)||(38391896-38391959)
chr7 (101-152)||(46578343-46578394)
chr7 (101-152)||(46658743-46658794)
chr7 (102-164)||(2851055-2851117)
chr7 (90-147)||(12171675-12171733)
chr7 (102-164)||(20353056-20353118)
chr7 (87-151)||(32389166-32389232)
chr7 (102-152)||(37066261-37066311)
chr7 (111-152)||(16086290-16086331)
chr7 (102-151)||(36711618-36711667)
chr7 (90-165)||(3498292-3498368)
chr7 (108-160)||(27234861-27234913)
chr7 (102-170)||(40069396-40069463)
[»] scaffold0011 (1 HSPs)
scaffold0011 (90-160)||(245-316)
[»] chr8 (27 HSPs)
chr8 (101-156)||(32485017-32485072)
chr8 (90-156)||(38883953-38884020)
chr8 (108-156)||(28464859-28464907)
chr8 (101-156)||(34194638-34194693)
chr8 (102-156)||(32480275-32480329)
chr8 (102-156)||(37922891-37922945)
chr8 (102-156)||(38884025-38884079)
chr8 (76-156)||(12955828-12955909)
chr8 (111-164)||(35447783-35447836)
chr8 (102-154)||(28435421-28435473)
chr8 (102-154)||(37922821-37922873)
chr8 (102-164)||(35447863-35447925)
chr8 (90-156)||(40716812-40716879)
chr8 (101-151)||(5419527-5419577)
chr8 (102-156)||(8568827-8568881)
chr8 (90-151)||(24726047-24726109)
chr8 (102-156)||(34194567-34194621)
chr8 (101-158)||(33761012-33761069)
chr8 (102-151)||(43484011-43484060)
chr8 (102-154)||(3611778-3611830)
chr8 (102-150)||(14052971-14053019)
chr8 (102-154)||(17911430-17911482)
chr8 (102-154)||(28435493-28435545)
chr8 (102-154)||(32480197-32480249)
chr8 (102-166)||(32484938-32485002)
chr8 (102-150)||(33934092-33934140)
chr8 (102-154)||(35063539-35063591)
[»] chr2 (39 HSPs)
chr2 (101-160)||(24971283-24971342)
chr2 (102-164)||(20195368-20195430)
chr2 (108-164)||(43514841-43514897)
chr2 (90-156)||(4898172-4898239)
chr2 (90-156)||(4945566-4945633)
chr2 (109-164)||(8382797-8382852)
chr2 (90-156)||(25668477-25668544)
chr2 (90-156)||(26567643-26567710)
chr2 (102-152)||(5204903-5204953)
chr2 (102-164)||(36490558-36490620)
chr2 (102-156)||(40340548-40340602)
chr2 (102-152)||(40739503-40739553)
chr2 (102-160)||(41145267-41145325)
chr2 (102-151)||(9665192-9665241)
chr2 (102-151)||(38262064-38262113)
chr2 (112-160)||(8218210-8218258)
chr2 (102-150)||(8554684-8554732)
chr2 (108-156)||(17843958-17844006)
chr2 (102-162)||(17844030-17844090)
chr2 (108-164)||(27327915-27327971)
chr2 (90-156)||(324803-324870)
chr2 (90-164)||(5144267-5144342)
chr2 (90-160)||(26269359-26269430)
chr2 (102-152)||(2795389-2795439)
chr2 (102-160)||(4032583-4032641)
chr2 (102-156)||(5144347-5144401)
chr2 (104-154)||(8382879-8382929)
chr2 (102-156)||(10099559-10099613)
chr2 (102-156)||(30905131-30905185)
chr2 (102-160)||(32473474-32473532)
chr2 (102-152)||(34911109-34911159)
chr2 (102-152)||(34911177-34911227)
chr2 (102-156)||(37486078-37486132)
chr2 (90-158)||(9709663-9709732)
chr2 (102-151)||(20128823-20128872)
chr2 (108-164)||(33618196-33618252)
chr2 (108-164)||(34240823-34240879)
chr2 (90-161)||(37131738-37131810)
chr2 (102-162)||(37485973-37486033)
[»] chr1 (40 HSPs)
chr1 (102-160)||(8751511-8751569)
chr1 (102-164)||(24478664-24478726)
chr1 (102-156)||(31909828-31909882)
chr1 (108-160)||(26059121-26059174)
chr1 (102-170)||(8751426-8751493)
chr1 (90-156)||(5852695-5852762)
chr1 (90-156)||(6763400-6763467)
chr1 (47-82)||(15095464-15095499)
chr1 (90-156)||(46518011-46518078)
chr1 (90-160)||(47011310-47011381)
chr1 (102-164)||(25378256-25378318)
chr1 (102-152)||(25378336-25378386)
chr1 (102-156)||(31909756-31909810)
chr1 (102-160)||(52222302-52222360)
chr1 (50-82)||(15100968-15101000)
chr1 (102-154)||(26660653-26660705)
chr1 (102-154)||(27549124-27549176)
chr1 (102-154)||(39181130-39181182)
chr1 (102-162)||(47011245-47011305)
chr1 (109-156)||(27552237-27552284)
chr1 (103-154)||(27552310-27552361)
chr1 (102-153)||(48605080-48605131)
chr1 (90-148)||(52132862-52132921)
chr1 (102-152)||(17988233-17988283)
chr1 (102-156)||(26059198-26059252)
chr1 (102-156)||(31919919-31919973)
chr1 (102-164)||(35838797-35838859)
chr1 (102-164)||(38824290-38824352)
chr1 (102-164)||(49980673-49980735)
chr1 (103-164)||(24286764-24286825)
chr1 (102-151)||(24478744-24478793)
chr1 (102-151)||(31503637-31503686)
chr1 (119-164)||(32914207-32914252)
chr1 (102-151)||(52879896-52879945)
chr1 (196-248)||(15103766-15103817)
chr1 (119-171)||(18023606-18023657)
chr1 (102-154)||(39181058-39181110)
chr1 (108-176)||(41621278-41621345)
chr1 (87-150)||(46590902-46590966)
chr1 (102-150)||(50144218-50144266)
[»] scaffold0111 (1 HSPs)
scaffold0111 (102-165)||(38086-38149)
[»] scaffold0622 (1 HSPs)
scaffold0622 (102-152)||(364-414)
[»] scaffold0123 (1 HSPs)
scaffold0123 (102-156)||(27122-27176)
[»] chr6 (15 HSPs)
chr6 (102-156)||(10731552-10731606)
chr6 (102-156)||(11989221-11989275)
chr6 (102-156)||(32786195-32786249)
chr6 (102-154)||(11989155-11989207)
chr6 (101-161)||(31577517-31577577)
chr6 (102-154)||(32786125-32786177)
chr6 (101-156)||(19687474-19687529)
chr6 (102-156)||(7418882-7418936)
chr6 (102-156)||(10731480-10731534)
chr6 (102-164)||(13740197-13740259)
chr6 (102-164)||(13745697-13745759)
chr6 (102-151)||(7418954-7419003)
chr6 (101-158)||(31577444-31577501)
chr6 (102-151)||(32161643-32161692)
chr6 (102-154)||(12588775-12588827)
[»] scaffold0321 (1 HSPs)
scaffold0321 (102-156)||(1640-1694)
[»] scaffold0067 (1 HSPs)
scaffold0067 (102-162)||(7047-7107)


Alignment Details
Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 8126196 - 8126263
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  8126196 catattataaaccacatatatcattaattgaatgaacctaaaaaataaaatttgcttatattttgaaa 8126263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 54680567 - 54680630
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| |||||||    
T  54680567 tacatacatcattaattgaatgaacctaaaaaataaaatttgcttatattttgaaacggatgga 54680630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 26770800 - 26770862
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||    
T  26770800 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggatgga 26770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 53717976 - 53718038
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||    
T  53717976 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggatgga 53718038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 54726122 - 54726183
Alignment:
Q  91 atattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||||||||| ||||||||||||||||||||||| || |||  ||||||||||||||||||    
T  54726122 atattataaatcacatatatcattaattaaatgaatctaaaagtcaaaatttgcttatattt 54726183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 44435235 - 44435183
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  44435235 acatacatcattaattgaatgaacctaaaaaataaaatttgcttatattttga 44435183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 16294858 - 16294803
Alignment:
Q  103 catatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatg 158  Q
    |||| |||||||||| ||||||||| ||||| |||||||| |||||||||||||||    
T  16294858 catacatcattaattgaatgaacctaaaaaataaaatttgtttatattttgaaatg 16294803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 32827489 - 32827431
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||| |||||||||| ||||||||| ||||  ||| ||||||||||||||||||||||    
T  32827489 acatacatcattaattgaatgaacctaaaaagtaaagtttgcttatattttgaaatgga 32827431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 47900328 - 47900390
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||| | ||||||||| ||||| | |||||||||||||||||||| |||||||    
T  47900328 acatacatcattaaatgaatgaacctaaaaaatagaatttgcttatattttgaaacggatgga 47900390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 22995772 - 22995703
Alignment:
Q  88 ttcatattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||||  ||||| |||||||||||||||||||| ||||  ||||||| ||||||||| ||||    
T  22995772 ttcatattataaaccacatacatcattaattaaatgaacctaaaaagtaaaatttacttatatttagaaa 22995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 22995775 - 22995824
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| ||||||||| |||| ||||||||||||||||||    
T  22995775 acatacatcattaattgaatgaacctaaaaagcaaaatttgcttatattt 22995824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 54726116 - 54726067
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||||| ||||||| ||||||||| |||| ||||||||||||||||||    
T  54726116 acatatattattaattgaatgaacctaaaaatcaaaatttgcttatattt 54726067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 32833742 - 32833678
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaa 165  Q
    |||||| |||||||||| ||||||| | ||||  |||||||||||||||||||||| ||| ||||    
T  32833742 tacatacatcattaattgaatgaacttaaaaagtaaaatttgcttatattttgaaacggaaggaa 32833678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 32998553 - 32998601
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  32998553 atcattaattgaatgaacctaaaaattaaaatttgcttatattttgaaa 32998601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 34205618 - 34205570
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  34205618 atcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 34205570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 34301010 - 34300962
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||||||||||||||||||  |||| ||||||| ||||||||||||||    
T  34301010 atcattaattaaatgaacctataaaataaaatttacttatattttgaaa 34300962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 50623121 - 50623169
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||| |||||| || ||||| ||||||||||||||||||||||    
T  50623121 atcattaattgaatgaatctaaaaaataaaatttgcttatattttgaaa 50623169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 17072664 - 17072617
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatat 149  Q
    ||||||||||| |||||||||||||| ||||  |||||||||||||||    
T  17072664 acatatatcatcaattaaatgaacctaaaaagtaaaatttgcttatat 17072617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 26770772 - 26770717
Alignment:
Q  102 acatatatcattaattaaatgaacctta-aaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| | |||| ||||||||||||||||||||||    
T  26770772 acatacatcattaattgaatgaacctaacaaaataaaatttgcttatattttgaaa 26770717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 7933597 - 7933651
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||| ||||| ||||||||| ||||  ||||||||||||||||||||||    
T  7933597 acatacatcaataattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 7933651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 8126191 - 8126137
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| || |||||||||||||| || ||||  ||||||||||||||||||||||    
T  8126191 acatacataattaattaaatgaatctaaaaagtaaaatttgcttatattttgaaa 8126137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 39333351 - 39333301
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    |||||||||||||| ||||||||||| |||||  || ||||||||||||||    
T  39333351 acatatatcattaaataaatgaacctaaaaaatgaattttgcttatatttt 39333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 44435253 - 44435307
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||   |||||||||||||||||||||    
T  44435253 acatacatcattaattgaatgaacctaaaaagtgaaatttgcttatattttgaaa 44435307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 23005091 - 23005014
Alignment:
Q  88 ttcatattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||||| |||||||||||||||| ||| ||||| |||||  ||||||| ||| | || |||| |||||||    
T  23005091 ttcatattataaatcacatatatcattaattgaataaacctaaaaaattaaatttgtttagaattagaaacggatgga 23005014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 34935599 - 34935550
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||    
T  34935599 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattt 34935550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 1044002 - 1044050
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatt 150  Q
    ||||| |||||||||||||||||||| |||   ||||||||||||||||    
T  1044002 acatacatcattaattaaatgaacctaaaagttaaaatttgcttatatt 1044050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 7672752 - 7672700
Alignment:
Q  104 atatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||||| |||||| || ||||  ||||||| ||||||||||||||    
T  7672752 atatatcattaattgaatgaatctaaaaagtaaaattttcttatattttgaaa 7672700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 39289646 - 39289702
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||||||||||||||| || ||||  |||||||  ||||||||||||| |||||||    
T  39289646 atcattaattaaatgaaactaaaaagtaaaatttaattatattttgaaacggatgga 39289702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 53717950 - 53717906
Alignment:
Q  110 cattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||||| || |||||| ||||| ||||||||||||||||||||    
T  53717950 cattaattgaaagaacctaaaaaataaaatttgcttatattttga 53717906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 14100 - 14174
Alignment:
Q  91 atattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||| |||||| |||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||    
T  14100 atattataaactacatagatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggatgga 14174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 14416472 - 14416553
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaagtatat 171  Q
    |||||||||||| ||||| |||||||||||||||||| | ||||  |||||||||||||||||||||| |||| |||||||||    
T  14416472 catattataaatcacatacatcattaattaaatgaacgtaaaaagtaaaatttgcttatattttgaaacggat-gaagtatat 14416553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 23995008 - 23994946
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||| |||||||| ||||||||||||| |||||||    
T  23995008 acatacatcattaattgaatgaacctaaaaaataaaatttgtttatattttgaaacggatgga 23994946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 34148019 - 34148081
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||||||||||||| ||||| ||||||| |||||||||| ||| |||||||    
T  34148019 acatacatcattaattaaatgaacctaaaaaataaaatttacttatattttaaaacggatgga 34148081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 38283471 - 38283525
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  38283471 acatagatcattaattgaatgaaccttaaaaataaattttgcttatattttgaaa 38283525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 30489148 - 30489103
Alignment:
Q  111 attaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  30489148 attaattaaatgaacctaaaaaataaaatttgcttatattttgaaa 30489103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 14416467 - 14416404
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaa 165  Q
    ||||| |||||||||| |||||| || ||||| |||||||||||||||||| ||| ||||||||    
T  14416467 acatacatcattaattgaatgaatctaaaaaataaaatttgcttatattttaaaacggatggaa 14416404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 26168254 - 26168321
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  26168254 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 26168321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 1723304 - 1723254
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||||||||||||| |||||  |||||||||||||||||    
T  1723304 acatacatcattaattaaatgaacctaaaaaatcaaatttgcttatatttt 1723254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 9984982 - 9984936
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttata 148  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  9984982 acatacatcattaattaaatgaacctaaaaaataaaatttgcttata 9984936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 15966035 - 15966089
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  15966035 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 15966089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 19784595 - 19784541
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  19784595 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 19784541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 19784602 - 19784656
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  19784602 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 19784656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 33696734 - 33696788
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  33696734 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 33696788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 35245652 - 35245598
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  35245652 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 35245598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 39602983 - 39603045
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||| ||||| ||||  |||||||||||||||||||||| |||||||    
T  39602983 acatacatcattaattgaataaacctaaaaagtaaaatttgcttatattttgaaacggatgga 39603045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 18942065 - 18942114
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  18942065 acatacatcattaattgaatgaacctaaaaaataaaatttgcttatattt 18942114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 21152662 - 21152597
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  21152662 catattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttacttatattttga 21152597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 21159797 - 21159732
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  21159797 catattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttacttatattttga 21159732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 21163604 - 21163539
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||||  ||||||| ||||||||||||    
T  21163604 catattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttacttatattttga 21163539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 1723324 - 1723371
Alignment:
Q  104 atatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||||||||||| ||||||||| ||||  |||||||||||||||||    
T  1723324 atatatcattaattgaatgaacctaaaaagtaaaatttgcttatattt 1723371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 7336921 - 7336988
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||||||||||||| ||||    
T  7336921 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaa 7336988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 7581464 - 7581523
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggat 161  Q
    |||||||||||||||| ||| ||||| ||||  ||||||||||||||||| |||| ||||    
T  7581464 acatatatcattaattgaataaacctaaaaattaaaatttgcttatatttagaaacggat 7581523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 13420519 - 13420562
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||||||||||||||||| |||||  ||||||||||||||||    
T  13420519 atcattaattaaatgaacctaaaaaatcaaatttgcttatattt 13420562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 30489175 - 30489226
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttg 153  Q
    |||||||||||||||| ||||||  | ||||| |||||||||||||||||||    
T  30489175 acatatatcattaattgaatgaatttaaaaaataaaatttgcttatattttg 30489226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 39916351 - 39916426
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||  ||||| || ||||||| ||||||||| ||||  ||||||||||||||||| |||| |||||||    
T  39916351 catattataaaccacatacattattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggatgga 39916426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 43340481 - 43340556
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||  ||||| || ||||||| ||||||||| ||||  |||||||||||||||||| ||| |||||||    
T  43340481 catattataaaccacataaattattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggatgga 43340556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 566372 - 566426
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||||| | ||||||||| ||||  ||| ||||||||||||||||||    
T  566372 acatatatcattaaatgaatgaacctaaaaataaaattttgcttatattttgaaa 566426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 6168758 - 6168820
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||| | ||||||||| |||||  || |||||||||||||||||| |||||||    
T  6168758 acatacatcattaaatgaatgaacctaaaaaatgaattttgcttatattttgaaacggatgga 6168820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 8408852 - 8408790
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||||| | ||||||||| |||||  || ||||||||||||| |||| |||||||    
T  8408852 acatatatcattaaatgaatgaacctaaaaaatcaattttgcttatatttagaaacggatgga 8408790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 14571069 - 14571015
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| |||||| || ||||| ||||||||||||||||| ||||    
T  14571069 acatacatcattaattgaatgaatctaaaaaataaaatttgcttatatttagaaa 14571015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 15385879 - 15385817
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||| | ||||  |||||||||||||||||| ||| |||||||    
T  15385879 acatacatcattaattgaatgaacttaaaaagtaaaatttgcttatattttaaaacggatgga 15385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 15966017 - 15965963
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||| ||||||||||||||    
T  15966017 acatacatcattaattgaatgaacctaaaaagtaaaatttacttatattttgaaa 15965963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 16985386 - 16985340
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttata 148  Q
    ||||| |||||||||||||||||||| |||  |||||||||||||||    
T  16985386 acatagatcattaattaaatgaacctaaaagtcaaaatttgcttata 16985340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 31758929 - 31758867
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||| | ||||||||| |||||  || ||||||||||||| ||||||||||||    
T  31758929 acatacatcattaaatgaatgaacctaaaaaatgaattttgcttatatttagaaatggatgga 31758867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 34102137 - 34102087
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||| |||||||||| ||||||||| ||||| ||| |||||||||||||    
T  34102137 tacatacatcattaattcaatgaacctaaaaaataaattttgcttatattt 34102087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 35067981 - 35067931
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||| |||||||||| ||||||||| ||||  |||||||||||||||||    
T  35067981 tacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattt 35067931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 35245687 - 35245737
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||    
T  35245687 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttt 35245737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 40208540 - 40208614
Alignment:
Q  87 attcatattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||||||||||||  |||||||||||||||| ||| ||| | ||||  ||||||| ||||||||| ||||||||    
T  40208540 attcatattataaaccacatatatcattaattgaataaacttaaaaagtaaaatttacttatatttagaaatgga 40208614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 22584311 - 22584360
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||    
T  22584311 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattt 22584360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 8409678 - 8409626
Alignment:
Q  104 atatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||||| |||||| || ||||  ||||||| ||||||||||||||    
T  8409678 atatatcattaattgaatgaatctaaaaagtaaaatttacttatattttgaaa 8409626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 15577531 - 15577595
Alignment:
Q  88 ttcatattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||||||||||  || || |||||||||||||||||||  |||| ||||||||| ||||||||    
T  15577531 ttcatattataaaccacgtacatcattaattaaatgaaccaaaaaagcaaaatttgtttatattt 15577595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 18626067 - 18626016
Alignment:
Q  196 ttggcaactaagctctcttctaagatttttcatggaatatgttattatgacat 248  Q
    |||||||||||||| ||||||| |||||||| |||| |||| |||||||||||    
T  18626067 ttggcaactaagctatcttctaggatttttcgtggattatg-tattatgacat 18626016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 29112339 - 29112299
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttata 148  Q
    |||||||||| ||||||||| ||||| ||||||||||||||    
T  29112339 atcattaattgaatgaacctaaaaaataaaatttgcttata 29112299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 38860861 - 38860809
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| |||||  || ||||||||||||||||    
T  38860861 acatacatcattaattgaatgaacctaaaaaatcaattttgcttatattttga 38860809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 29978553 - 29978491
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||||||||  |||||||||||||||||| |||||||||||    
T  29978553 acatacatcattaattgaatgaaccttaaaagtaaaatttgcttatattttaaaatggatgga 29978491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 49745542 - 49745604
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| ||||||||||||||| |||| ||||| |||||||||||||||||||||| |||||||    
T  49745542 acatacatcattaattaaatggacctaaaaaataaaatttgcttatattttgaaacggatgga 49745604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 17028307 - 17028240
Alignment:
Q  90 catattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||  |||| |||||||||||||||||    
T  17028307 catattataaactacatatatcattaattgaatgaacctaaaaagtaaaagttgcttatattttgaaa 17028240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 48079590 - 48079515
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||    
T  48079590 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggatgga 48079515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 5048509 - 5048447
Alignment:
Q  90 catattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||||||||| |||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  5048509 catattataaactacatatatcattaattaaatgaatctaaaaaataaaatttgtttatattt 5048447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 12721725 - 12721787
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||    
T  12721725 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggatgga 12721787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 23754271 - 23754329
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    |||||||||||||||| ||||||||| ||||  |||||||||||||||||| |||||||    
T  23754271 acatatatcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaatgga 23754329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 32112375 - 32112313
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||| |||| ||||||||||||||||| |||||||    
T  32112375 acatacatcattaattgaatgaacctaaaaaaaaaaaattgcttatattttgaaacggatgga 32112313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 37306886 - 37306830
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||||||||||| ||||  ||||||||||||||||| |||| |||||||    
T  37306886 atcattaattaaatgaacctaaaaagtaaaatttgcttatatttagaaacggatgga 37306830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 23329444 - 23329369
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||| |||||||||||||| |||||||    
T  23329444 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttatattttgaaacggatgga 23329369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 39754184 - 39754227
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  39754184 atcattaattaaatgaacctaaaaaataaaatttgcttatattt 39754227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 12721706 - 12721652
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  12721706 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 12721652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 17659526 - 17659472
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  17659526 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 17659472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 25856089 - 25856143
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  25856089 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 25856143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 26206673 - 26206731
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||| |||||||||||||||||||| ||||  |||||||||||||||||  |||||||    
T  26206673 acatacatcattaattaaatgaacctaaaaagtaaaatttgcttatatttaaaaatgga 26206731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 41788982 - 41788928
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||| ||||    
T  41788982 acatacatcattaattgaatgaacctaaaaaataaaatttgcttatatttagaaa 41788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 52256819 - 52256741
Alignment:
Q  87 attcatattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||||||||||||  ||||| |||| ||||| ||||||||| ||||  |||||||| ||||||||| |||||||||||    
T  52256819 attcatattataaaccacatacatcaataattgaatgaacctaaaaagtaaaatttgtttatattttaaaatggatgga 52256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 52256821 - 52256871
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  52256821 acatacatcattaattaaataaacctaaaaaataaaatttgcttatatttt 52256871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 13743919 - 13743866
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaa 155  Q
    ||||| ||||||||||||||||| || ||||  |||||||||||||||||||||    
T  13743919 acatacatcattaattaaatgaatctaaaaagtaaaatttgcttatattttgaa 13743866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 13743924 - 13743989
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  13743924 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 13743989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 43635900 - 43635977
Alignment:
Q  88 ttcatattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||| || |||||| |||||||||| ||| ||||| ||||  |||||||||||||||||| ||| |||||||    
T  43635900 ttcatattatgaactacatacatcattaattgaatcaacctaaaaagtaaaatttgcttatattttaaaacggatgga 43635977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 46779373 - 46779422
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| ||||||||||||||||| || ||||| |||||||||||||||||    
T  46779373 acatacatcattaattaaatgaatctaaaaaataaaatttgcttatattt 46779422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 17659544 - 17659596
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||||||||||||| |||||| || ||||  ||||||||||||||||||||    
T  17659544 acatatatcattaattgaatgaatctaaaaagtaaaatttgcttatattttga 17659596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 30279219 - 30279271
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  30279219 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 30279271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 46996538 - 46996602
Alignment:
Q  88 ttcatattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||||||| || |||||| |||||||||||||||||||| ||||  |||||||| ||||||||    
T  46996538 ttcatattatgaactacataaatcattaattaaatgaacctaaaaagtaaaatttgtttatattt 46996602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 51126184 - 51126236
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  51126184 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 51126236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 15133888 - 15133822
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaagtat 169  Q
    ||||| |||||||||| ||||||||| ||||  ||| |||||||||||||||||| ||| ||||||||    
T  15133888 acatacatcattaattgaatgaacctaaaaagtaaattttgcttatattttgaaacgga-ggaagtat 15133822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 17028312 - 17028375
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaa 165  Q
    ||||| |||||||||| ||||||||| ||||  |||||||| ||||||||||||| ||| ||||    
T  17028312 acatacatcattaattgaatgaacctaaaaagtaaaatttgtttatattttgaaacggagggaa 17028375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 19754276 - 19754217
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggat 161  Q
    |||||||||||||||| |||||| || ||||  ||||||| |||||||||||||| ||||    
T  19754276 acatatatcattaattgaatgaatctaaaaagtaaaatttacttatattttgaaacggat 19754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 19785530 - 19785589
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggat 161  Q
    |||||||||||||||| |||||| || ||||  ||||||| |||||||||||||| ||||    
T  19785530 acatatatcattaattgaatgaatctaaaaagtaaaatttacttatattttgaaacggat 19785589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 44496862 - 44496811
Alignment:
Q  109 tcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||  |||||||    
T  44496862 tcattaattgaatgaacctaaaaaataaaatttgcttatatttaaaaatgga 44496811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 48042669 - 48042724
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||| |||||||||| ||||||||| ||||   |||||||||||||||||||||    
T  48042669 tacatacatcattaattgaatgaacctaaaaagtgaaatttgcttatattttgaaa 48042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 56420509 - 56420564
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||| |||||||||| ||||||||| ||||  ||||||||||||||||| ||||    
T  56420509 tacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaa 56420564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 38675218 - 38675276
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||| ||||||||||  |||||||| ||||   |||||||||||||||||||||||||    
T  38675218 acatacatcattaattgcatgaacctaaaaagtgaaatttgcttatattttgaaatgga 38675276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 51126166 - 51126116
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||    
T  51126166 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttt 51126116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 24331487 - 24331426
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatg 162  Q
    |||||| || ||||||| |||||| || ||||| ||||||||||||||||| |||| |||||    
T  24331487 tacatacattattaattgaatgaatctaaaaaataaaatttgcttatatttagaaacggatg 24331426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 39754175 - 39754106
Alignment:
Q  88 ttcatattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||||||||| | |||||| |||||||||| ||| ||||| ||||  ||||||||||||||||| ||||    
T  39754175 ttcatattatagactacatacatcattaattgaataaacctaaaaagtaaaatttgcttatatttagaaa 39754106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 44495751 - 44495804
Alignment:
Q  103 catatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||||||||||||| ||||||||| |||||  || ||||||||||||| ||||    
T  44495751 catatatcattaattgaatgaacctaaaaaatcaattttgcttatatttagaaa 44495804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 44639807 - 44639758
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||    
T  44639807 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattt 44639758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 25856071 - 25856019
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||| |||||||||| || ||||  ||||||||||||||||||||    
T  25856071 acatacatcattgattaaatgaatctaaaaagtaaaatttgcttatattttga 25856019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 30051398 - 30051342
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||| ||||||||| ||||   ||||||||||||||||| ||| |||||||    
T  30051398 atcattaattgaatgaacctaaaaagttaaatttgcttatattttaaaacggatgga 30051342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 18941388 - 18941452
Alignment:
Q  100 atacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||||| |||||||||| ||||||||| ||||  |||||||||||||||||||| |||||||||    
T  18941388 atacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgagatggatgga 18941452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 28003244 - 28003311
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  28003244 catattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 28003311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 46221157 - 46221212
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaat 157  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  46221157 acatacatcattaattaaatgaacctaaaaaataaaatttgcttatattttaaaat 46221212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 35593720 - 35593778
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||| |||||||||| ||||||||| ||| | ||||||||||||||||||||||||||    
T  35593720 acatacatcattaattgaatgaacctaaaatataaaatttgcttatattttgaaatgga 35593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 19532019 - 19532084
Alignment:
Q  90 catattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||||||||| |||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  19532019 catattataaactacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 19532084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 31601310 - 31601257
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||||||||||||    
T  31601310 tacatacatcattaattaaatgaacctacaaaataaaatttgcttatattttga 31601257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 24211636 - 24211692
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||    
T  24211636 atcattaattgaatgaacctaaaaactaaaatttgcttatattttgaaacggatgga 24211692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 46477207 - 46477128
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaagtat 169  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  |||||||||||||||||| ||||||| ||||||||    
T  46477207 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaatgga-ggaagtat 46477128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 8379198 - 8379135
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaa 165  Q
    ||||| |||||||||| ||||||||| ||||   ||||||||||||||||||||| ||||||||    
T  8379198 acatacatcattaattgaatgaacctaaaaagttaaatttgcttatattttgaaacggatggaa 8379135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 19532014 - 19531960
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  19532014 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 19531960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 27940806 - 27940756
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||    
T  27940806 acatacatcattaattgaatgaacctaaaaaataaaatttgcttatatttt 27940756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 27940824 - 27940878
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  27940824 acatacatcattaattcaatgaacctaaaaagtaaaatttgcttatattttgaaa 27940878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 33471569 - 33471623
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||| ||||||| ||||||||||||||    
T  33471569 acatacatcattaattgaatgaacctaaaaaataaaatttacttatattttgaaa 33471623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 43067085 - 43067023
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||  ||| |||||||||||||||||| |||||||    
T  43067085 acatacatcattaattgaatgaacctaaaaagtaaattttgcttatattttgaaacggatgga 43067023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 18941390 - 18941341
Alignment:
Q  107 tatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  18941390 tatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 18941341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 33471551 - 33471499
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| |||||| || ||||| ||||||||||||||||||||    
T  33471551 acatacatcattaattgaatgaatctaaaaaataaaatttgcttatattttga 33471499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 37066243 - 37066191
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  37066243 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 37066191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 17882782 - 17882707
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||| ||||  |||||||||||||||||| | ||||  ||||||| |||||||||| ||| |||||||    
T  17882782 catattataaatcacatgcatcattaattaaatgaacttaaaaagtaaaatttacttatattttaaaagggatgga 17882707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 27942391 - 27942458
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||| ||||||| | ||||  ||||||||||||||||||||||    
T  27942391 catattataaaccacatacatcattaattgaatgaacttaaaaagtaaaatttgcttatattttgaaa 27942458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 38391896 - 38391959
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaa 165  Q
    ||||| |||||||||||||||||||| |||   ||||||||||||||||| |||| ||| ||||    
T  38391896 acatacatcattaattaaatgaacctaaaatgtaaaatttgcttatatttagaaacggagggaa 38391959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 152
Target Start/End: Original strand, 46578343 - 46578394
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    |||||| |||||||||| ||||||||| ||||  ||||||||||||||||||    
T  46578343 tacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttt 46578394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 46658794 - 46658743
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    |||||| |||||||||| ||||||||| ||||  ||||||||||||||||||    
T  46658794 tacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttt 46658743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 2851055 - 2851117
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||| ||||||||||| ||||   || |||||||||||||||||| |||||||    
T  2851055 acatacatcattaaataaatgaacctaaaaagtgaattttgcttatattttgaaaaggatgga 2851117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 12171733 - 12171675
Alignment:
Q  90 catattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttat 147  Q
    ||||||||||| |||||| ||||||||||||||||| || ||||  |||||||||||||    
T  12171733 catattataaactacatacatcattaattaaatgaatctaaaaagtaaaatttgcttat 12171675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 20353118 - 20353056
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||  ||| |||||||    
T  20353118 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggatgga 20353056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 32389232 - 32389166
Alignment:
Q  87 attcatattataaat-acatatatcattaattaaa-tgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||||||||||||  ||||| ||||||||||||| ||||||| ||| | |||||||||||||||||    
T  32389232 attcatattataaaccacatacatcattaattaaaatgaacctaaaatataaaatttgcttatattt 32389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 37066261 - 37066311
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||    
T  37066261 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttt 37066311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 16086290 - 16086331
Alignment:
Q  111 attaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||    
T  16086290 attaattgaatgaacctaaaaaataaaatttgcttatatttt 16086331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 36711618 - 36711667
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||||||||||||| ||||||||||||||  |||||||  ||||||||    
T  36711618 acatatatcattaattgaatgaaccttaaaagtaaaatttatttatattt 36711667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 3498368 - 3498292
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaa 165  Q
    |||||||||||  ||||| |||||||||| |||||| || ||||  |||||||||||||||||| ||| ||| ||||    
T  3498368 catattataaaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagggaa 3498292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 27234913 - 27234861
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    |||||||||| ||||||||| ||||  |||||||||||||| || ||||||||    
T  27234913 atcattaattgaatgaacctaaaaagtaaaatttgcttataattagaaatgga 27234861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 40069463 - 40069396
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaagtata 170  Q
    |||||||||||||||| ||||||| | | ||| || |||||||||||||| |||| ||| |||||||||    
T  40069463 acatatatcattaattgaatgaacgtaacaaataatatttgcttatatttagaaacgga-ggaagtata 40069396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 245 - 316
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  245 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaatgga 316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 32485017 - 32485072
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||    
T  32485017 tacatatatcattaattaaatgaacctaaaaaataaaatttgattatatttagaaa 32485072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 38884020 - 38883953
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  38884020 catattataaaccacatacatcattaattgaatgaacctaaaaaataaaatttgcttatattttgaaa 38883953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 28464859 - 28464907
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  28464859 atcattaattgaatgaacctaaaaaataaaatttgcttatattttgaaa 28464907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 34194638 - 34194693
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  34194638 tacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 34194693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 32480275 - 32480329
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  32480275 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 32480329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 37922891 - 37922945
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  37922891 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 37922945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 38884025 - 38884079
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  38884025 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 38884079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 12955909 - 12955828
Alignment:
Q  76 atataaacaacattcatattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||| ||| |||||||||||| |  ||||| |||||||| ||||||||||| |||||  || ||||||||||||||||||    
T  12955909 atataagcaaaattcatattatagaccacatacatcattaaataaatgaacctaaaaaatgaattttgcttatattttgaaa 12955828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 35447836 - 35447783
Alignment:
Q  111 attaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||    
T  35447836 attaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggatgga 35447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 28435473 - 28435421
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||||||||||| ||||||||||| |||||  || ||||||||||||||||    
T  28435473 acatatatcattaaataaatgaacctaaaaaatgaattttgcttatattttga 28435421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 37922873 - 37922821
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  37922873 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 37922821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 35447863 - 35447925
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaac-aaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||| |||||||||  |||||||||||||||||||||| |||||||    
T  35447863 acatacatcattaattgaatga-ccttaaaaagtaaaatttgcttatattttgaaacggatgga 35447925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 40716812 - 40716879
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||||||| || || ||||| ||||||||||||||||| ||||    
T  40716812 catattataaaccacatacatcattaattaaattaagctaaaaaataaaatttgcttatatttagaaa 40716879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 5419577 - 5419527
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||| |||||| ||| ||||||||| ||||| |||||||||||||||||    
T  5419577 tacatacatcattgattgaatgaacctaaaaaataaaatttgcttatattt 5419527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 8568881 - 8568827
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  |||||||| |||||||||||||    
T  8568881 acatacatcattaattgaatgaacctaaaaagtaaaatttgtttatattttgaaa 8568827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 24726109 - 24726047
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    |||||||||||  |||||||||||||||| || |||||| ||||  |||||||||||||||||    
T  24726109 catattataaaccacatatatcattaattgaacgaacctaaaaagtaaaatttgcttatattt 24726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 34194621 - 34194567
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| |||||| || ||||  ||||||||||||||||||||||    
T  34194621 acatacatcattaattgaatgaatctaaaaagtaaaatttgcttatattttgaaa 34194567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 33761012 - 33761069
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatg 158  Q
    |||||| |||| ||||| ||||||  | ||||| ||||||||||||||||||||||||    
T  33761012 tacatacatcaataattgaatgaatttaaaaaataaaatttgcttatattttgaaatg 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 43484011 - 43484060
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||    
T  43484011 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattt 43484060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 3611830 - 3611778
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| |||||  || ||||||||||||||||    
T  3611830 acatacatcattaattgaatgaacctaaaaaatcaattttgcttatattttga 3611778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 14053019 - 14052971
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatt 150  Q
    ||||| |||||| ||| ||||||||| |||| |||||||||||||||||    
T  14053019 acatacatcattgattgaatgaacctaaaaatcaaaatttgcttatatt 14052971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 17911430 - 17911482
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||| ||||| ||||||||| ||||  ||||||||||||||||||||    
T  17911430 acatacatcactaattgaatgaacctaaaaagtaaaatttgcttatattttga 17911482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 28435493 - 28435545
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||||||||||| | ||||||||| |||||  || ||||||||||||||||    
T  28435493 acatatatcattaaatgaatgaacctaaaaaatgaattttgcttatattttga 28435545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 32480249 - 32480197
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| |||||||||  |||  ||||||||||||||||||||    
T  32480249 acatacatcattaattgaatgaacctagaaagtaaaatttgcttatattttga 32480197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 32485002 - 32484938
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaag 166  Q
    ||||| || ||||||| |||||| || ||||  |||||||||||||||||||||| |||| ||||    
T  32485002 acatacataattaattgaatgaatctaaaaagtaaaatttgcttatattttgaaacggattgaag 32484938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 33934140 - 33934092
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatt 150  Q
    ||||| |||||| ||| ||||||||| |||| |||||||||||||||||    
T  33934140 acatacatcattgattgaatgaacctaaaaatcaaaatttgcttatatt 33934092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 35063539 - 35063591
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||||||||||||| ||||   || ||||||||||||||||    
T  35063539 acatacatcattaattaaatgaacctaaaaagtcaattttgcttatattttga 35063591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 24971283 - 24971342
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    |||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  24971283 tacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaatgga 24971342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 20195368 - 20195430
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||| |||||||||||    
T  20195368 acatacatcattaattgaatgaacctaaaaactaaaatttgcttatattttaaaatggatgga 20195430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 43514841 - 43514897
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||    
T  43514841 atcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggatgga 43514897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 4898239 - 4898172
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||||  ||||||||||||||||| ||||    
T  4898239 catattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaa 4898172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 4945633 - 4945566
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||||  ||||||||||||||||| ||||    
T  4945633 catattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaa 4945566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 8382852 - 8382797
Alignment:
Q  109 tcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||||||| ||||||||| |||||  ||||||||||||||||||||| |||||||    
T  8382852 tcattaattgaatgaacctaaaaaattaaatttgcttatattttgaaacggatgga 8382797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 25668477 - 25668544
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||||||||||||| ||||  ||||||||||||||||| ||||    
T  25668477 catattataaaccacatacatcattaattaaatgaacctaaaaagtaaaatttgcttatatttagaaa 25668544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 26567710 - 26567643
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  26567710 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 26567643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 5204953 - 5204903
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||||||||||||| ||||  ||||||||||||||||||    
T  5204953 acatacatcattaattaaatgaacctaaaaagtaaaatttgcttatatttt 5204903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 36490558 - 36490620
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||| |||| |||||||    
T  36490558 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggatgga 36490620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 40340548 - 40340602
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  40340548 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 40340602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 40739553 - 40739503
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    |||||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  40739553 acatatatcattaattgaatgaacctaaaaagtaaaatttgcttatatttt 40739503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 41145325 - 41145267
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||| |||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  41145325 acatacatcattaattgaatgaacctaaaaagtaaaatttgtttatattttgaaatgga 41145267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 9665192 - 9665241
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| ||||||||| |||||| ||||||||||||||||    
T  9665192 acatacatcattaattgaatgaacctaaaaaactaaatttgcttatattt 9665241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 38262064 - 38262113
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  38262064 acatacatcattaattgaatgaacctaaaaaataaaatttgcttatattt 38262113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 8218258 - 8218210
Alignment:
Q  112 ttaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||||    
T  8218258 ttaattaaatgaacctaaaaaataaaatttgtttatatttagaaatgga 8218210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 8554732 - 8554684
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatt 150  Q
    ||||||||||||||||||||||| || ||||  ||||||||||||||||    
T  8554732 acatatatcattaattaaatgaatctaaaaagtaaaatttgcttatatt 8554684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 17844006 - 17843958
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  17844006 atcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 17843958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 17844030 - 17844090
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatg 162  Q
    ||||| |||||||||| ||||||| | ||||  |||||||||||||||||||||| |||||    
T  17844030 acatacatcattaattgaatgaacttaaaaagtaaaatttgcttatattttgaaacggatg 17844090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 27327915 - 27327971
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||| ||||||||| |||||  |||||||||||||||||| || |||||||    
T  27327915 atcattaattgaatgaacctaaaaaatcaaatttgcttatattttggaacggatgga 27327971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 324870 - 324803
Alignment:
Q  90 catattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||||||||| |||||| |||||||||| ||||||| | ||||  ||||||||||||||||| ||||    
T  324870 catattataaactacatacatcattaattgaatgaacttaaaaagtaaaatttgcttatatttagaaa 324803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 5144342 - 5144267
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||||||||| |||| ||| |||||||    
T  5144342 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatgttttaaaacggatgga 5144267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 26269359 - 26269430
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    |||||||||||  ||||| || |||||||||||||| || ||| | ||||||||||||||||| ||||||||    
T  26269359 catattataaaccacatacattattaattaaatgaatctaaaatataaaatttgcttatatttagaaatgga 26269430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 2795389 - 2795439
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||    
T  2795389 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttt 2795439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 4032641 - 4032583
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||| |||||||| ||||||||||| ||| |  || ||||||||||||||||||||||    
T  4032641 acatacatcattaaataaatgaacctaaaatatgaattttgcttatattttgaaatgga 4032583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 5144347 - 5144401
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||||||||||||| ||||  |||||||  |||||||||||||    
T  5144347 acatacatcattaattaaatgaacctaaaaagtaaaatttatttatattttgaaa 5144401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 8382879 - 8382929
Alignment:
Q  104 atatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||||| ||||||| ||||||||| ||||| ||||||| ||||||||||||    
T  8382879 atatattattaattgaatgaacctaaaaaataaaatttacttatattttga 8382929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 10099613 - 10099559
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||||||||||||| |||   ||||||||||||||||| ||||    
T  10099613 acatacatcattaattaaatgaacctaaaatgtaaaatttgcttatatttagaaa 10099559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 30905185 - 30905131
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||| ||||||||||||||| ||||  |||||||| |||||||||||||    
T  30905185 acatacatcaataattaaatgaacctaaaaagtaaaatttgtttatattttgaaa 30905131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 32473532 - 32473474
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||| |||||||||| |||||| || ||||| |||||||||||||||||  |||||||    
T  32473532 acatacatcattaattgaatgaatctaaaaaataaaatttgcttatatttaaaaatgga 32473474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 34911159 - 34911109
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  34911159 acatacatcattaattgaataaacctaaaaaataaaatttgcttatatttt 34911109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 34911177 - 34911227
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||    
T  34911177 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttt 34911227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 37486078 - 37486132
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||| ||||    
T  37486078 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaa 37486132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 9709732 - 9709663
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatg 158  Q
    |||||||||||  ||||| |||||||||| ||| ||||| ||||  ||||||||||||||||| ||||||    
T  9709732 catattataaaccacatacatcattaattgaattaacctaaaaagtaaaatttgcttatatttagaaatg 9709663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 20128823 - 20128872
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||||||||||||| ||||| ||||||  |||||||||    
T  20128823 acatacatcattaattaaatgaacctaaaaaataaaattcacttatattt 20128872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 33618252 - 33618196
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||| | ||||||||| |||||  || |||||||||||||||||| |||||||    
T  33618252 atcattaaatgaatgaacctaaaaaatgaattttgcttatattttgaaacggatgga 33618196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 34240879 - 34240823
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||| ||||||||| |||    ||||||||||||||||||||| |||||||    
T  34240879 atcattaattgaatgaacctaaaatgtcaaatttgcttatattttgaaacggatgga 34240823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 37131738 - 37131810
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggat 161  Q
    |||||||||||| ||||| |||||||||| ||||||  | |||   |||||||||||||||||||||| ||||    
T  37131738 catattataaatcacataaatcattaattgaatgaatataaaacgtaaaatttgcttatattttgaaacggat 37131810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 37486033 - 37485973
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatg 162  Q
    ||||| |||||||||| ||||||| | ||||  ||||||||||||||||| |||| |||||    
T  37486033 acatacatcattaattgaatgaacataaaaagtaaaatttgcttatatttagaaacggatg 37485973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 8751511 - 8751569
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||| |||||||||| ||||||||| ||||| |||||||||||||||||| |||||||    
T  8751511 acatacatcattaattgaatgaacctaaaaaataaaatttgcttatattttaaaatgga 8751569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 24478726 - 24478664
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    |||||||||||||||| ||||||||| ||||| ||||||| ||||||||| |||| |||||||    
T  24478726 acatatatcattaattgaatgaacctcaaaaataaaatttacttatatttagaaacggatgga 24478664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 31909828 - 31909882
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  31909828 acatacatcattaattgaatgaacctaaaaaataaaatttgcttatattttgaaa 31909882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 26059174 - 26059121
Alignment:
Q  108 atcattaattaaatgaaccttaaaaac-aaaatttgcttatattttgaaatgga 160  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  26059174 atcattaattgaatgaaccttaaaaagtaaaatttgcttatattttgaaatgga 26059121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 8751493 - 8751426
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaagtata 170  Q
    ||||| |||||||||| ||||||||| ||||| |||||||||||||||||| ||| ||| |||||||||    
T  8751493 acatacatcattaattgaatgaacctaaaaaataaaatttgcttatattttaaaacgga-ggaagtata 8751426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 5852762 - 5852695
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  5852762 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 5852695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 6763400 - 6763467
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  6763400 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 6763467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 15095464 - 15095499
Alignment:
Q  47 ttgtgtcatatgaaggaccgatgttagttatataaa 82  Q
    ||||||||||||||||||||||||||||||||||||    
T  15095464 ttgtgtcatatgaaggaccgatgttagttatataaa 15095499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 46518011 - 46518078
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||  ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  46518011 catattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 46518078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 47011310 - 47011381
Alignment:
Q  90 catattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||||  |||||||||||||||||  |||||||    
T  47011310 catattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaatgga 47011381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 25378318 - 25378256
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||||| | |||||||    
T  25378318 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgagacggatgga 25378256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 25378336 - 25378386
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||    
T  25378336 acatacatcattaattgaatgaacctaaaaaataaaatttgcttatatttt 25378386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 31909810 - 31909756
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  31909810 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 31909756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 52222302 - 52222360
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatgga 160  Q
    ||||| ||||||||||| |||||||| ||||  |||||||||||||||||| |||||||    
T  52222302 acatacatcattaattacatgaacctaaaaagtaaaatttgcttatattttaaaatgga 52222360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 15100968 - 15101000
Alignment:
Q  50 tgtcatatgaaggaccgatgttagttatataaa 82  Q
    |||||||||||||||||||||||||||||||||    
T  15100968 tgtcatatgaaggaccgatgttagttatataaa 15101000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 26660705 - 26660653
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  26660705 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 26660653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 27549124 - 27549176
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  27549124 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 27549176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 39181130 - 39181182
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  39181130 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 39181182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 47011305 - 47011245
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatg 162  Q
    |||||||||||||||| ||||||||| ||||  |||||||| |||||||| |||| |||||    
T  47011305 acatatatcattaattgaatgaacctaaaaagtaaaatttgtttatatttagaaacggatg 47011245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 27552284 - 27552237
Alignment:
Q  109 tcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||||||| ||||||||| ||||| |||||||| |||||||||||||    
T  27552284 tcattaattgaatgaacctaaaaaataaaatttgtttatattttgaaa 27552237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 27552310 - 27552361
Alignment:
Q  103 catatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    |||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  27552310 catacatcattaattgaatgaacctaaaaactaaaatttgcttatattttga 27552361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 48605131 - 48605080
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttg 153  Q
    ||||| |||||||||| ||||||||| ||||  |||||||||||||||||||    
T  48605131 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttg 48605080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 52132862 - 52132921
Alignment:
Q  90 catattataaa-tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttata 148  Q
    ||||||||||| |||||| |||||||||||||| ||| | ||||| ||||||||||||||    
T  52132862 catattataaactacatacatcattaattaaataaacttaaaaaataaaatttgcttata 52132921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 17988283 - 17988233
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||    
T  17988283 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttt 17988233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 26059198 - 26059252
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||| | ||||  ||||||||||||||||||||||    
T  26059198 acataaatcattaattgaatgaacttaaaaagtaaaatttgcttatattttgaaa 26059252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 31919919 - 31919973
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||| | ||||||||| ||||| ||| ||||||||||||||||||    
T  31919919 acatacatcattaaatgaatgaacctaaaaaataaattttgcttatattttgaaa 31919973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 35838797 - 35838859
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||| ||||||||||| ||||   || |||||||||||||||||| |||||||    
T  35838797 acatacatcattaaataaatgaacctaaaaagtgaattttgcttatattttgaaacggatgga 35838859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 38824352 - 38824290
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||||| ||||||| | ||||| |||||||||||||||||  ||| |||||||    
T  38824352 acatacatcattaattgaatgaacataaaaaataaaatttgcttatatttaaaaacggatgga 38824290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 49980673 - 49980735
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||| | ||||||||| |||||  || |||||||||||||||||| |||||||    
T  49980673 acatacatcattaaatgaatgaacctaaaaaatgaattttgcttatattttgaaacggatgga 49980735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 24286825 - 24286764
Alignment:
Q  103 catatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||||||||||| | ||||||||| ||||   || |||||||||||||||||| |||||||    
T  24286825 catatatcattaaatgaatgaacctaaaaagtgaattttgcttatattttgaaacggatgga 24286764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 24478744 - 24478793
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||||||||||| | ||||  |||||||||||||||||    
T  24478744 acatacatcattaattaaatgaacttaaaaagtaaaatttgcttatattt 24478793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 31503686 - 31503637
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||||||| ||| | |||||| ||||||||||||||||    
T  31503686 acatacatcattaattaaattaacataaaaaactaaatttgcttatattt 31503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 32914252 - 32914207
Alignment:
Q  119 aatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||||||| ||||| |||||||||||||||||| ||| |||||||    
T  32914252 aatgaacctaaaaaataaaatttgcttatattttaaaacggatgga 32914207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 52879945 - 52879896
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| |||||| || |||||| ||||||||||||||||    
T  52879945 acatacatcattaattgaatgaatctaaaaaactaaatttgcttatattt 52879896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 15103766 - 15103817
Alignment:
Q  196 ttggcaactaagctctcttctaagatttttcatggaatatgttattatgacat 248  Q
    |||||||||||||| ||||||| |||||||| |||| |||| |||||||||||    
T  15103766 ttggcaactaagctatcttctaggatttttcgtggattatg-tattatgacat 15103817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 18023657 - 18023606
Alignment:
Q  119 aatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaagtatat 171  Q
    ||||||||| ||||  ||| |||||||||||||||||||||| ||||||||||    
T  18023657 aatgaacctaaaaagtaaattttgcttatattttgaaatgga-ggaagtatat 18023606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 39181110 - 39181058
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| |||||| || ||||  ||||||||||||||||||||    
T  39181110 acatacatcattaattgaatgaatctaaaaagtaaaatttgcttatattttga 39181058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 41621345 - 41621278
Alignment:
Q  108 atcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaagtatatgacat 176  Q
    |||||||| | |||||| || ||||| ||| |||||||||||||||||| |||| ||||||||| ||||    
T  41621345 atcattaaatgaatgaatctaaaaaataaattttgcttatattttgaaacggat-gaagtatattacat 41621278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 46590902 - 46590966
Alignment:
Q  87 attcatattataaat-acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatt 150  Q
    ||||||||||||||  ||||| | |||||||| ||||||||| ||||| | ||||||||||||||    
T  46590902 attcatattataaaccacatacaacattaattgaatgaacctaaaaaatataatttgcttatatt 46590966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 50144218 - 50144266
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatt 150  Q
    |||||||| ||||||||||||||||| |||   ||||||||||||||||    
T  50144218 acatatattattaattaaatgaacctaaaagttaaaatttgcttatatt 50144266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 38086 - 38149
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatggaa 165  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||| |||||||| ||||    
T  38086 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaatggagggaa 38149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 364 - 414
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatatttt 152  Q
    ||||| |||||||||||||||||||| ||||| |||||||| |||||||||    
T  364 acatacatcattaattaaatgaacctaaaaaataaaatttgtttatatttt 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 27122 - 27176
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||||||||||||| || |||||| | ||| ||||||||||||||||||||||    
T  27122 acatatatcattaattgaaagaacctaataaataaaatttgcttatattttgaaa 27176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 10731552 - 10731606
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  10731552 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 10731606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 11989221 - 11989275
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  11989221 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 11989275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 32786195 - 32786249
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  32786195 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaa 32786249  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 11989207 - 11989155
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  11989207 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 11989155  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 31577517 - 31577577
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggat 161  Q
    |||||| |||||||||| ||||||||| ||||| ||| |||||||||||||| ||| ||||    
T  31577517 tacatacatcattaattgaatgaacctaaaaaataaattttgcttatattttaaaacggat 31577577  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 32786177 - 32786125
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||||||    
T  32786177 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttga 32786125  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 19687529 - 19687474
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    |||||| |||||||||| ||||||||| ||||  ||||||||||||||||| ||||    
T  19687529 tacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaa 19687474  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 7418936 - 7418882
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||||| ||||||||| ||||  ||||||||||||||||| ||||    
T  7418936 acatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaa 7418882  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 10731534 - 10731480
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||| | ||||||||| ||||  ||||||||||||||||||||||    
T  10731534 acatacatcattaaatgaatgaacctaaaaagtaaaatttgcttatattttgaaa 10731480  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 13740259 - 13740197
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||| | |||||||||||||||  || ||||||||||||| |||| |||||||    
T  13740259 acatacatcattaaatgaatgaaccttaaaaaacaattttgcttatatttagaaacggatgga 13740197  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 13745759 - 13745697
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatgga 164  Q
    ||||| |||||||| | |||||||||||||||  || ||||||||||||| |||| |||||||    
T  13745759 acatacatcattaaatgaatgaaccttaaaaaacaattttgcttatatttagaaacggatgga 13745697  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 7418954 - 7419003
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| |||||||||| ||||||| | ||||| |||||||||||||||||    
T  7418954 acatacatcattaatttaatgaacttaaaaaataaaatttgcttatattt 7419003  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 31577501 - 31577444
Alignment:
Q  101 tacatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatg 158  Q
    |||||| || ||||||| |||||| || ||||| |||||||||||||||||| |||||    
T  31577501 tacatacataattaattgaatgaatctaaaaaataaaatttgcttatattttaaaatg 31577444  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 32161643 - 32161692
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattt 151  Q
    ||||| ||||||| || ||||||||| |||||| ||||||||||||||||    
T  32161643 acatacatcattatttgaatgaacctaaaaaactaaatttgcttatattt 32161692  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 12588827 - 12588775
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttga 154  Q
    ||||| |||||||| | ||||||||| ||||| ||| ||||||||||||||||    
T  12588827 acatacatcattaaatgaatgaacctaaaaaataaattttgcttatattttga 12588775  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 1694 - 1640
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaa 156  Q
    ||||| |||||||| | ||||||||| ||||| ||| ||||||||||||||||||    
T  1694 acatacatcattaaatgaatgaacctaaaaaataaattttgcttatattttgaaa 1640  T

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Target: scaffold0067 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 7047 - 7107
Alignment:
Q  102 acatatatcattaattaaatgaaccttaaaaacaaaatttgcttatattttgaaatggatg 162  Q
    ||||| |||||| | ||||||||||| ||||| ||| |||||||||||||| ||| |||||    
T  7047 acatacatcattgaataaatgaacctaaaaaataaattttgcttatattttaaaacggatg 7107  T

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