View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4699_low_9 (Length: 275)
Name: NF4699_low_9
Description: NF4699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4699_low_9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 39537388 - 39537122
Alignment:
| Q |
9 |
agcagagaaagttaagaaaagtgacgaaaaattgaaagagggttgaacaatagcctttgtatgagccaaaactaaaaaccaaaacagcgaaatttacaaa |
108 |
Q |
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| T |
39537388 |
agcagagaaagttaagaaaagtgacgaaaaattgaaagagagttgaacaatagcctttgtatgagccaaaacaaaaaaccaaaacaaggaaatttacaaa |
39537289 |
T |
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| Q |
109 |
gatgggtaaactacctcagtagacagcaaaaatttgaagggcgatttgcacagtaaaataccaaaaagacagcaaagcattgttactttcaaactcataa |
208 |
Q |
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| T |
39537288 |
gataggtaaactacctcagtagacagcaaaaatttgaagggcaatttgcacagtaaaataccaaaaagacagcaaagcattgttactttcaaactcataa |
39537189 |
T |
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| Q |
209 |
agtcaattgacgtattccttttaacaaactgagctatctctgtccagagtcatgaaaaagggttctt |
275 |
Q |
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| T |
39537188 |
agtcaattgacgtattccttttaacaaactgagctatctctgtccagagccatgaacaagggttctt |
39537122 |
T |
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