View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4700_low_5 (Length: 279)
Name: NF4700_low_5
Description: NF4700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4700_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 12 - 269
Target Start/End: Complemental strand, 26641711 - 26641454
Alignment:
| Q |
12 |
tcatcatagttagtaggaccgaccacttagggtattggtctgtcaaggtcagataactatgaaacaattgctctttatgcatccagtaaactccaactgt |
111 |
Q |
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| T |
26641711 |
tcatcatagttagtaggaccgaccacttagggtattggtctgtcaaggtcagatagctatgaaacaattgctctttatgcatccagtaaagtccaactgt |
26641612 |
T |
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| Q |
112 |
agttaatcacaattcatatacactttttaaatcggatgaattcatttaaaaagtgtctcaaccgaactcaatagtaccaaacgttagttaattaccattt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
26641611 |
agttaatcacaattcatatacactttttaaatcggatgaattgatttaaaaactgtctcaaccgaactcaatagtactaaacgttagttaattaccattt |
26641512 |
T |
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| Q |
212 |
ggtgggtgcctgaaagcaatcactactaaagagcaattgtctaactatgatgatggcc |
269 |
Q |
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| T |
26641511 |
ggttggtgcctgaaagcaatcactactaaagagcaattgtctaactatgaagatggcc |
26641454 |
T |
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