View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4701-Insertion-4 (Length: 340)
Name: NF4701-Insertion-4
Description: NF4701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4701-Insertion-4 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 38 - 340
Target Start/End: Complemental strand, 32769563 - 32769265
Alignment:
| Q |
38 |
gatcccatttgagatgtgttatctttcaacaaatatttatatgtagctgagaaaggaacgtggccagatcattgaagaaggatgcagcagcagaagcaga |
137 |
Q |
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| T |
32769563 |
gatcccatttgagatgtgttatctttcaacaaatattaatatgtagctgagaaaggaacgtggccagatcattgaagaaggatgcagtagcagaagcaga |
32769464 |
T |
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| Q |
138 |
cgaaggagaaatcaatggtggagtggacaaattataatttggccttgggagtatcgtattctttaacaaaattcataacaagtacagacattaatatttt |
237 |
Q |
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| T |
32769463 |
cgaagtagaaatcaatgg-----tggacaaattataatttagccttgggagtatcgtattctttaacaaaattcatgacaagtacagacattaatatttt |
32769369 |
T |
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| Q |
238 |
atgtttcaataa-aaatactaaaataatgaacagtgtacgatgtactacagtgtctgtctctaactcctagctttttcccatttctcaatattaattttc |
336 |
Q |
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|||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32769368 |
atgtttcaataacaaatactaaaataatgaacagtgtactatgtactacagtgtctgtctctaactcctagctttttcccatttctcaatattaattttc |
32769269 |
T |
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