View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4702-Insertion-12 (Length: 158)

Name: NF4702-Insertion-12
Description: NF4702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4702-Insertion-12
NF4702-Insertion-12
[»] chr5 (57 HSPs)
chr5 (14-90)||(2485229-2485305)
chr5 (16-89)||(5731919-5731992)
chr5 (21-89)||(14728123-14728191)
chr5 (21-89)||(42086367-42086435)
chr5 (16-89)||(9805039-9805112)
chr5 (21-89)||(20255409-20255477)
chr5 (25-89)||(27648424-27648488)
chr5 (23-89)||(40773315-40773381)
chr5 (16-89)||(1538466-1538539)
chr5 (16-89)||(19572759-19572832)
chr5 (16-89)||(40117450-40117523)
chr5 (21-89)||(21375391-21375459)
chr5 (29-89)||(28857194-28857254)
chr5 (16-88)||(42291505-42291577)
chr5 (21-88)||(20525878-20525945)
chr5 (16-89)||(8513554-8513627)
chr5 (16-89)||(11845800-11845873)
chr5 (16-89)||(13664295-13664368)
chr5 (16-89)||(23383692-23383765)
chr5 (16-89)||(39099778-39099851)
chr5 (16-89)||(42861217-42861290)
chr5 (21-89)||(14588616-14588684)
chr5 (21-89)||(24875385-24875453)
chr5 (41-89)||(38296729-38296777)
chr5 (25-88)||(15034119-15034182)
chr5 (34-89)||(28857002-28857057)
chr5 (22-77)||(41801018-41801073)
chr5 (22-88)||(37263281-37263347)
chr5 (100-137)||(2485325-2485362)
chr5 (16-89)||(22295251-22295324)
chr5 (16-89)||(25417182-25417255)
chr5 (16-89)||(43399163-43399236)
chr5 (21-89)||(3653913-3653981)
chr5 (21-69)||(7308383-7308431)
chr5 (21-80)||(35813006-35813065)
chr5 (39-89)||(25950593-25950643)
chr5 (24-90)||(43212503-43212569)
chr5 (16-89)||(4016254-4016327)
chr5 (16-73)||(9168268-9168325)
chr5 (16-89)||(9812907-9812980)
chr5 (16-89)||(12766166-12766239)
chr5 (16-65)||(14974347-14974396)
chr5 (16-89)||(20682616-20682689)
chr5 (16-89)||(30349614-30349687)
chr5 (16-89)||(38369734-38369807)
chr5 (16-89)||(38897718-38897791)
chr5 (16-89)||(39728422-39728495)
chr5 (16-89)||(41163459-41163532)
chr5 (25-89)||(12705058-12705122)
chr5 (25-89)||(14235713-14235777)
chr5 (21-89)||(16757418-16757486)
chr5 (26-90)||(20692978-20693042)
chr5 (25-89)||(22655157-22655220)
chr5 (25-89)||(23247351-23247414)
chr5 (21-89)||(24653811-24653878)
chr5 (21-88)||(19839367-19839434)
chr5 (26-77)||(23260704-23260755)
[»] chr8 (33 HSPs)
chr8 (16-89)||(10927644-10927717)
chr8 (21-89)||(45521211-45521279)
chr8 (22-89)||(43027349-43027416)
chr8 (16-88)||(4479296-4479368)
chr8 (21-89)||(36662447-36662515)
chr8 (16-89)||(6100510-6100583)
chr8 (21-89)||(583855-583923)
chr8 (21-89)||(14846618-14846686)
chr8 (21-88)||(15884556-15884623)
chr8 (27-89)||(26570973-26571035)
chr8 (16-89)||(8141140-8141213)
chr8 (24-89)||(8997543-8997608)
chr8 (21-90)||(18374053-18374122)
chr8 (21-89)||(39969914-39969982)
chr8 (22-89)||(993232-993299)
chr8 (21-88)||(3379812-3379879)
chr8 (22-80)||(24938570-24938628)
chr8 (16-89)||(23895606-23895679)
chr8 (16-89)||(33935735-33935807)
chr8 (16-89)||(43032939-43033012)
chr8 (16-89)||(44893277-44893350)
chr8 (45-89)||(68097-68141)
chr8 (21-89)||(11298266-11298334)
chr8 (26-76)||(29933820-29933870)
chr8 (16-89)||(2467117-2467190)
chr8 (16-89)||(9859994-9860067)
chr8 (25-90)||(33401798-33401862)
chr8 (25-89)||(2964123-2964187)
chr8 (21-89)||(3692876-3692944)
chr8 (45-85)||(4772054-4772094)
chr8 (21-89)||(10535403-10535471)
chr8 (21-81)||(12754068-12754128)
chr8 (25-80)||(11785962-11786017)
[»] chr7 (48 HSPs)
chr7 (16-89)||(17748381-17748454)
chr7 (22-89)||(48551900-48551967)
chr7 (16-89)||(13095895-13095968)
chr7 (16-89)||(38578866-38578939)
chr7 (16-89)||(48804720-48804793)
chr7 (16-90)||(3353461-3353535)
chr7 (25-83)||(41267929-41267987)
chr7 (21-89)||(24983417-24983486)
chr7 (16-89)||(27028316-27028389)
chr7 (16-89)||(43346778-43346851)
chr7 (16-89)||(43861971-43862044)
chr7 (21-89)||(4195201-4195269)
chr7 (16-87)||(18785706-18785777)
chr7 (26-89)||(32768984-32769047)
chr7 (21-80)||(45960011-45960070)
chr7 (16-90)||(41945510-41945584)
chr7 (21-79)||(45697199-45697257)
chr7 (21-90)||(3603399-3603468)
chr7 (16-89)||(24969325-24969398)
chr7 (16-89)||(39420874-39420947)
chr7 (25-89)||(5069814-5069878)
chr7 (16-88)||(27875088-27875160)
chr7 (21-89)||(43925554-43925622)
chr7 (21-80)||(28396168-28396227)
chr7 (16-89)||(10047875-10047948)
chr7 (16-89)||(22993366-22993439)
chr7 (24-89)||(28744207-28744272)
chr7 (32-89)||(42032149-42032206)
chr7 (16-89)||(42210261-42210334)
chr7 (24-89)||(44961637-44961702)
chr7 (16-89)||(47341913-47341986)
chr7 (28-89)||(48244355-48244416)
chr7 (21-89)||(8734685-8734753)
chr7 (21-89)||(29151982-29152050)
chr7 (21-89)||(39474982-39475050)
chr7 (21-89)||(48224730-48224798)
chr7 (27-89)||(14650365-14650427)
chr7 (16-89)||(1605978-1606051)
chr7 (21-90)||(37514963-37515032)
chr7 (25-89)||(942618-942682)
chr7 (21-89)||(21530790-21530858)
chr7 (21-89)||(22573854-22573922)
chr7 (33-65)||(23060731-23060763)
chr7 (28-88)||(26423288-26423347)
chr7 (21-89)||(34659268-34659336)
chr7 (22-65)||(4973133-4973176)
chr7 (21-80)||(5039426-5039485)
chr7 (25-72)||(36619270-36619317)
[»] chr1 (53 HSPs)
chr1 (16-89)||(5855557-5855630)
chr1 (16-89)||(32142846-32142919)
chr1 (21-90)||(5504071-5504140)
chr1 (16-89)||(49078149-49078222)
chr1 (21-89)||(26325852-26325920)
chr1 (21-89)||(32150922-32150990)
chr1 (22-89)||(11397889-11397956)
chr1 (16-89)||(4581682-4581755)
chr1 (16-89)||(8764026-8764099)
chr1 (16-89)||(10422823-10422896)
chr1 (16-89)||(17642004-17642077)
chr1 (16-89)||(45361882-45361955)
chr1 (21-89)||(9659179-9659247)
chr1 (25-89)||(34697379-34697443)
chr1 (21-89)||(34719816-34719884)
chr1 (21-89)||(41663856-41663924)
chr1 (21-84)||(10336556-10336619)
chr1 (24-79)||(14254278-14254333)
chr1 (16-90)||(16263580-16263654)
chr1 (16-89)||(10172971-10173044)
chr1 (24-89)||(26660181-26660245)
chr1 (16-69)||(33498859-33498912)
chr1 (21-89)||(14357795-14357863)
chr1 (21-89)||(15466005-15466073)
chr1 (21-89)||(16956506-16956574)
chr1 (21-89)||(18708540-18708608)
chr1 (22-89)||(46929738-46929805)
chr1 (27-89)||(41696598-41696660)
chr1 (16-89)||(18915902-18915975)
chr1 (24-89)||(35211172-35211237)
chr1 (16-89)||(37339855-37339928)
chr1 (16-89)||(43959821-43959894)
chr1 (16-89)||(45726433-45726506)
chr1 (24-89)||(50094947-50095012)
chr1 (21-89)||(32911-32979)
chr1 (33-89)||(1764197-1764253)
chr1 (21-89)||(6899598-6899666)
chr1 (25-89)||(30927727-30927791)
chr1 (21-89)||(38791610-38791678)
chr1 (21-89)||(50503361-50503429)
chr1 (16-79)||(33418125-33418188)
chr1 (39-89)||(51437515-51437565)
chr1 (16-89)||(2567311-2567384)
chr1 (16-89)||(2980931-2981004)
chr1 (32-89)||(3850742-3850799)
chr1 (16-89)||(10507733-10507806)
chr1 (24-85)||(13262126-13262187)
chr1 (21-90)||(21849204-21849273)
chr1 (16-89)||(25178576-25178649)
chr1 (28-89)||(31576547-31576608)
chr1 (21-89)||(35908798-35908864)
chr1 (21-89)||(17389811-17389879)
chr1 (58-89)||(40702591-40702622)
[»] chr3 (62 HSPs)
chr3 (21-89)||(47219183-47219251)
chr3 (16-90)||(45877488-45877562)
chr3 (16-90)||(54261260-54261334)
chr3 (16-85)||(45402355-45402424)
chr3 (21-89)||(3136694-3136762)
chr3 (21-89)||(23511606-23511674)
chr3 (21-89)||(29127958-29128026)
chr3 (21-90)||(47471870-47471939)
chr3 (16-88)||(3507534-3507606)
chr3 (21-89)||(49021203-49021271)
chr3 (16-88)||(53649761-53649833)
chr3 (16-89)||(35315990-35316063)
chr3 (25-89)||(7310703-7310767)
chr3 (22-89)||(44064584-44064651)
chr3 (21-90)||(22909822-22909891)
chr3 (16-89)||(25294994-25295067)
chr3 (16-89)||(26043846-26043919)
chr3 (16-89)||(29762155-29762228)
chr3 (16-89)||(47749105-47749178)
chr3 (20-89)||(50753341-50753410)
chr3 (21-89)||(24506648-24506716)
chr3 (25-89)||(26361967-26362031)
chr3 (25-89)||(28572211-28572275)
chr3 (16-88)||(49198385-49198457)
chr3 (21-89)||(51060281-51060349)
chr3 (21-80)||(50405612-50405671)
chr3 (21-87)||(4638193-4638259)
chr3 (16-78)||(30045855-30045917)
chr3 (21-79)||(32522018-32522076)
chr3 (16-78)||(33251696-33251758)
chr3 (16-89)||(7328878-7328950)
chr3 (47-88)||(11393476-11393517)
chr3 (16-89)||(15320220-15320293)
chr3 (16-89)||(29135947-29136020)
chr3 (16-89)||(55069679-55069752)
chr3 (39-87)||(8683242-8683290)
chr3 (21-69)||(15285753-15285801)
chr3 (21-89)||(45450447-45450515)
chr3 (21-89)||(54237487-54237555)
chr3 (46-89)||(19147025-19147068)
chr3 (21-80)||(40660336-40660395)
chr3 (22-89)||(52168570-52168637)
chr3 (25-79)||(11249757-11249811)
chr3 (16-54)||(11687144-11687182)
chr3 (26-88)||(25515749-25515811)
chr3 (16-78)||(30767258-30767320)
chr3 (16-77)||(8164587-8164648)
chr3 (16-85)||(10040590-10040659)
chr3 (21-78)||(41630523-41630580)
chr3 (24-88)||(2029268-2029332)
chr3 (21-89)||(7648779-7648847)
chr3 (21-89)||(10043721-10043789)
chr3 (21-89)||(34374442-34374510)
chr3 (16-80)||(35923632-35923696)
chr3 (21-89)||(35998571-35998639)
chr3 (45-89)||(36043674-36043718)
chr3 (21-89)||(43330732-43330800)
chr3 (21-89)||(48342059-48342127)
chr3 (16-55)||(6462446-6462485)
chr3 (22-89)||(13893966-13894033)
chr3 (25-72)||(40944926-40944972)
chr3 (21-76)||(52364813-52364868)
[»] scaffold0291 (1 HSPs)
scaffold0291 (16-89)||(6892-6965)
[»] chr6 (35 HSPs)
chr6 (16-89)||(21898686-21898759)
chr6 (16-89)||(5253222-5253295)
chr6 (16-89)||(8888920-8888992)
chr6 (16-89)||(9633624-9633697)
chr6 (16-89)||(34954618-34954691)
chr6 (29-89)||(2105092-2105152)
chr6 (21-89)||(5029860-5029928)
chr6 (21-89)||(8932704-8932772)
chr6 (21-89)||(8938754-8938822)
chr6 (21-89)||(8944170-8944238)
chr6 (25-89)||(14783419-14783483)
chr6 (21-89)||(30410488-30410556)
chr6 (26-89)||(6606096-6606159)
chr6 (16-89)||(3601122-3601195)
chr6 (16-89)||(13036003-13036076)
chr6 (16-89)||(19089536-19089609)
chr6 (16-89)||(30788852-30788925)
chr6 (21-89)||(31129220-31129288)
chr6 (21-88)||(11142646-11142713)
chr6 (21-79)||(2271312-2271370)
chr6 (16-78)||(29444775-29444837)
chr6 (41-90)||(3030641-3030690)
chr6 (16-89)||(3587944-3588017)
chr6 (34-79)||(21872959-21873004)
chr6 (16-89)||(29333138-29333211)
chr6 (26-77)||(14326045-14326096)
chr6 (26-77)||(14419055-14419106)
chr6 (26-77)||(17114908-17114959)
chr6 (48-87)||(32048511-32048550)
chr6 (26-88)||(8149797-8149859)
chr6 (16-89)||(12606468-12606541)
chr6 (25-89)||(8611973-8612037)
chr6 (21-89)||(12635857-12635925)
chr6 (16-79)||(374983-375046)
chr6 (7-90)||(13391315-13391398)
[»] chr4 (64 HSPs)
chr4 (21-89)||(55921078-55921146)
chr4 (21-88)||(40780861-40780928)
chr4 (16-90)||(42722575-42722649)
chr4 (16-90)||(43458652-43458726)
chr4 (16-89)||(7246645-7246718)
chr4 (21-84)||(46108735-46108798)
chr4 (31-89)||(25406562-25406620)
chr4 (21-83)||(53354576-53354638)
chr4 (16-89)||(17080082-17080155)
chr4 (16-89)||(29895826-29895899)
chr4 (16-89)||(31588725-31588798)
chr4 (16-89)||(38075472-38075545)
chr4 (16-89)||(53599099-53599172)
chr4 (21-89)||(14858754-14858822)
chr4 (21-89)||(36145214-36145282)
chr4 (21-88)||(6032643-6032710)
chr4 (21-80)||(8889066-8889125)
chr4 (26-89)||(38168305-38168368)
chr4 (16-79)||(40272340-40272403)
chr4 (21-87)||(21429345-21429411)
chr4 (16-89)||(2559346-2559419)
chr4 (16-89)||(6779250-6779323)
chr4 (7-88)||(13073568-13073649)
chr4 (16-89)||(14567278-14567351)
chr4 (16-89)||(16450339-16450412)
chr4 (16-89)||(36262766-36262839)
chr4 (16-89)||(38166066-38166139)
chr4 (21-89)||(49952144-49952213)
chr4 (16-89)||(52950121-52950194)
chr4 (21-89)||(4738662-4738730)
chr4 (22-90)||(45721131-45721199)
chr4 (21-88)||(26237422-26237489)
chr4 (16-90)||(14124055-14124129)
chr4 (21-79)||(20354681-20354739)
chr4 (21-86)||(1940779-1940844)
chr4 (16-89)||(3159468-3159541)
chr4 (16-89)||(5472847-5472920)
chr4 (21-90)||(8064796-8064865)
chr4 (16-89)||(16645157-16645230)
chr4 (16-89)||(24166489-24166562)
chr4 (16-89)||(47078497-47078570)
chr4 (16-89)||(48834699-48834772)
chr4 (16-77)||(49260676-49260737)
chr4 (13-89)||(21192676-21192752)
chr4 (21-89)||(29588780-29588848)
chr4 (25-89)||(38841367-38841431)
chr4 (16-63)||(3574471-3574518)
chr4 (16-79)||(20421812-20421875)
chr4 (27-90)||(30317283-30317346)
chr4 (18-89)||(48656260-48656331)
chr4 (16-61)||(1446865-1446910)
chr4 (21-90)||(2687303-2687372)
chr4 (16-89)||(14597899-14597972)
chr4 (16-89)||(15839934-15840007)
chr4 (16-77)||(20532420-20532481)
chr4 (21-74)||(23788441-23788494)
chr4 (21-90)||(31635745-31635814)
chr4 (16-89)||(47682381-47682454)
chr4 (24-89)||(50485990-50486055)
chr4 (21-89)||(24850626-24850694)
chr4 (21-89)||(28944975-28945043)
chr4 (21-89)||(42722378-42722446)
chr4 (24-80)||(54946296-54946352)
chr4 (21-88)||(14859335-14859402)
[»] chr2 (58 HSPs)
chr2 (22-89)||(20116611-20116678)
chr2 (16-89)||(7747308-7747381)
chr2 (16-89)||(25540403-25540476)
chr2 (7-80)||(39201516-39201589)
chr2 (16-89)||(41220669-41220742)
chr2 (21-89)||(18649025-18649093)
chr2 (16-89)||(3643886-3643959)
chr2 (16-89)||(22593168-22593240)
chr2 (16-89)||(33005785-33005858)
chr2 (16-89)||(34346286-34346359)
chr2 (16-80)||(10669626-10669690)
chr2 (21-89)||(12455349-12455417)
chr2 (21-89)||(15234060-15234128)
chr2 (21-88)||(2784971-2785038)
chr2 (22-89)||(3811690-3811757)
chr2 (23-90)||(3848912-3848979)
chr2 (16-78)||(10026626-10026688)
chr2 (26-84)||(20963114-20963172)
chr2 (40-90)||(44773321-44773371)
chr2 (16-89)||(6358150-6358223)
chr2 (21-78)||(10046487-10046544)
chr2 (16-89)||(10823094-10823167)
chr2 (21-90)||(12864263-12864332)
chr2 (21-90)||(14169607-14169676)
chr2 (16-89)||(16325629-16325702)
chr2 (16-89)||(26805330-26805403)
chr2 (16-89)||(38962797-38962870)
chr2 (25-89)||(16034980-16035044)
chr2 (21-89)||(37560212-37560280)
chr2 (16-78)||(28525465-28525527)
chr2 (16-89)||(8410165-8410238)
chr2 (16-89)||(11069912-11069985)
chr2 (16-88)||(20612534-20612607)
chr2 (21-78)||(34356245-34356302)
chr2 (16-89)||(38005436-38005509)
chr2 (16-89)||(42770650-42770723)
chr2 (25-89)||(35946781-35946845)
chr2 (21-89)||(41187888-41187956)
chr2 (21-89)||(44945632-44945700)
chr2 (16-79)||(331535-331598)
chr2 (21-55)||(30721888-30721922)
chr2 (16-90)||(39806883-39806957)
chr2 (16-89)||(9360747-9360820)
chr2 (16-89)||(13026410-13026483)
chr2 (21-88)||(36480438-36480502)
chr2 (16-89)||(41031905-41031978)
chr2 (16-89)||(44139518-44139591)
chr2 (32-88)||(1773644-1773700)
chr2 (21-89)||(2550907-2550975)
chr2 (21-89)||(5035327-5035395)
chr2 (21-89)||(18902529-18902597)
chr2 (21-89)||(19976806-19976874)
chr2 (22-78)||(20533158-20533214)
chr2 (45-89)||(29422278-29422322)
chr2 (21-89)||(34722719-34722787)
chr2 (21-89)||(37804890-37804958)
chr2 (16-71)||(24179602-24179657)
chr2 (28-83)||(35443870-35443925)
[»] scaffold0002 (3 HSPs)
scaffold0002 (25-89)||(616-680)
scaffold0002 (16-89)||(319459-319532)
scaffold0002 (36-79)||(410807-410850)
[»] scaffold0009 (1 HSPs)
scaffold0009 (21-90)||(42830-42899)
[»] scaffold0209 (1 HSPs)
scaffold0209 (21-89)||(12615-12683)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-89)||(8700-8773)
[»] scaffold0005 (2 HSPs)
scaffold0005 (16-89)||(250024-250097)
scaffold0005 (16-89)||(219406-219479)
[»] scaffold0384 (1 HSPs)
scaffold0384 (16-84)||(6009-6077)
[»] scaffold0010 (1 HSPs)
scaffold0010 (21-89)||(155710-155778)
[»] scaffold0170 (1 HSPs)
scaffold0170 (16-79)||(9882-9945)
[»] scaffold0376 (1 HSPs)
scaffold0376 (16-90)||(12707-12781)
[»] scaffold0011 (2 HSPs)
scaffold0011 (21-90)||(224359-224428)
scaffold0011 (21-80)||(186559-186618)
[»] scaffold0006 (1 HSPs)
scaffold0006 (21-86)||(68556-68621)
[»] scaffold0316 (1 HSPs)
scaffold0316 (21-89)||(1613-1681)
[»] scaffold0223 (1 HSPs)
scaffold0223 (21-89)||(16921-16989)
[»] scaffold0116 (1 HSPs)
scaffold0116 (21-83)||(17432-17494)
[»] scaffold0086 (1 HSPs)
scaffold0086 (16-89)||(26220-26293)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-89)||(7834-7907)


Alignment Details
Target: chr5 (Bit Score: 73; Significance: 1e-33; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 2485229 - 2485305
Alignment:
Q  14 tgggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2485229 tgggcctgtgcgcatgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaagt 2485305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 5731992 - 5731919
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||||||||| | ||||||||||||||||||  |||||||||||||| ||||||||    
T  5731992 ggccagtgcgcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 14728123 - 14728191
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||||||| ||||||||    
T  14728123 gtgcgcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcgaaag 14728191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 42086367 - 42086435
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||||| ||||||||    
T  42086367 gtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 9805039 - 9805112
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||| | ||||||||    
T  9805039 ggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 20255409 - 20255477
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| || ||||||||| | ||||||||    
T  20255409 gtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaag 20255477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 27648488 - 27648424
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||||| |||||||||||| || ||||| ||| |||||||||||||||||||    
T  27648488 gcatgcctctacgtatgagccggattagtcgtccatctttggtggatcggaaaccgatgcgaaag 27648424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 40773315 - 40773381
Alignment:
Q  23 gcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||| || ||||||||||||||||||| ||||| || ||||||||||| ||||||||    
T  40773315 gcgcatgcctctacatacgagtcggattagtcgttcatctttggtgcgtcggaaaccggtgcgaaag 40773381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 1538466 - 1538539
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||| |||| |||| ||| |||||||||||||| ||||||||    
T  1538466 ggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaag 1538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 19572759 - 19572832
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||| ||| ||||| |||||||  ||||||||    
T  19572759 ggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaaag 19572832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 40117450 - 40117523
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||| ||||||||||||| ||| ||| |||||| ||||||||    
T  40117450 ggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatcgaaaaccggtgcgaaag 40117523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 21375391 - 21375459
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||| |||||| |||||||||||||||||| || ||||||||| |||||||||  ||||||||    
T  21375391 gtgcgcatgcttctacgcatgagtcggattagtcgtccatctttgatggatcggaaaccagtgcgaaag 21375459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 28857194 - 28857254
Alignment:
Q  29 gcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| ||||| ||||||||||| ||||||||| |||||||||||||| ||||||||    
T  28857194 gcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 28857254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 42291577 - 42291505
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||| |||| |||||||||||| | ||| |||||||||||| |||||||||||| |||||||||| |||||||    
T  42291577 ggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaa 42291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 20525878 - 20525945
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||||||||||||||| ||||| |||||||||||| |||| ||| ||| |||||||||| |||||||    
T  20525878 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 8513554 - 8513627
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||||||||||| | ||| | |||||||||| |||||||| |||||||||||||| ||||||||    
T  8513554 ggccagtgcacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 8513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 11845873 - 11845800
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||||||||| || |||| |||  |||||||||||||| |||||||| || |||||    
T  11845873 ggccagtgcgcatgcctctacgtatgagccgaattaatcgcccacctttgatgggttggaaaccggtgtgaaag 11845800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 13664295 - 13664368
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| | ||||| ||| ||||||||| || ||||||||||| ||||||||    
T  13664295 ggccagtgcgcatgcctctacgcatgagccagattaatcgatcacctttggtgtgtcggaaaccggtgcgaaag 13664368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 23383692 - 23383765
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||| |||||||||| |||||  ||||||||||| |||||||| |||||||||||| | ||||||||    
T  23383692 ggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 23383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 39099851 - 39099778
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||||||||||| ||||| |||||||||||  |||||||| |||||||||||||| ||| ||||    
T  39099851 ggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaag 39099778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 42861290 - 42861217
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||| |||| |||| ||| ||||||||| |||| ||||||||    
T  42861290 ggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaag 42861217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 14588684 - 14588616
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| || | || |||||| ||||||||    
T  14588684 gtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaag 14588616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 24875385 - 24875453
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| ||||||| | ||| ||||||| |||| |||||||||||||||||||| | |||||||||    
T  24875385 gtgcgcatgtctctacgcacgagccggattaatcgtccacctttgatgggtcggaaatcaatgcgaaag 24875453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 38296777 - 38296729
Alignment:
Q  41 gagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  38296777 gagtcggattagtcgcccacctttgatgggtcggaaaccgatgcaaaag 38296729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 15034119 - 15034182
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||||||||||| ||||| | ||||||| || |||||||||||| ||||||||||||| ||||    
T  15034119 gcatgcctctacgcatgagcctgattagttgtccacctttgatggatcggaaaccgatgtgaaa 15034182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 28857002 - 28857057
Alignment:
Q  34 tacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||| ||||||||||| ||||||||| |||||||||||||| ||||||||    
T  28857002 tacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 28857057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 41801018 - 41801073
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaa 77  Q
    |||||||| ||||||| | ||| ||||||||||||||| |||||||||||||||||    
T  41801018 tgcgcatgtctctacgcacgagccggattagtcgttcatctttgatgggtcggaaa 41801073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 37263281 - 37263347
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||||||||||||||| | ||| |||||||||||| |||||||  ||| |||||||||| |||||||    
T  37263281 tgcgcatgcctctacgcacgagccggattagtcgtccacctttattggatcggaaaccggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 2485325 - 2485362
Alignment:
Q  100 gtattttagatacacatatacgtaaaatggataaatta 137  Q
    |||||||| |||||||||||||||||||||||||||||    
T  2485325 gtattttatatacacatatacgtaaaatggataaatta 2485362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 22295251 - 22295324
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| |||||| |||||||||| | | ||||| | |||| |||| |||||||||||    
T  22295251 ggccagtgcgcatgcctctacgcatgagttggattagtcgcttatctttggtaggtcagaaatcgatgcgaaag 22295324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 25417255 - 25417182
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||| || ||| ||| |||||| ||||||| ||||||||    
T  25417255 ggccagtgcgcatgcctctacgaacgagccggattagtcatttaccattggtgggtcagaaaccggtgcgaaag 25417182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 43399163 - 43399236
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | |||  ||||||||||| ||| |||| | |||||||||||| ||||||||    
T  43399163 ggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaag 43399236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 3653981 - 3653913
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| |||||||||||| |||||||| ||| ||| |||||| ||| ||||    
T  3653981 gtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtgcaaaag 3653913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 7308431 - 7308383
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgg 69  Q
    |||| |||||||||||| ||||| ||||||||||| |||||||||||||    
T  7308431 gtgcacatgcctctacgcatgagccggattagtcgctcacctttgatgg 7308383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 35813065 - 35813006
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    ||||||||| ||||||  |||||||||||||||||| ||||||||| | |||| ||||||    
T  35813065 gtgcgcatgtctctacacatgagtcggattagtcgtccacctttgaagtgtcgaaaaccg 35813006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 25950643 - 25950593
Alignment:
Q  39 atgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||| |||||||||||| |||||||| ||||||| ||| |||||||||||    
T  25950643 atgagccggattagtcgtccacctttggtgggtcgaaaatcgatgcgaaag 25950593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 43212569 - 43212503
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||||| |  |||||| |||||||||||||||| ||  |||||| ||||||||| |||||||    
T  43212569 cgcatgcctctgcacatgagttggattagtcgttcaccatttgtgggtcagaaaccgatacgaaagt 43212503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 4016327 - 4016254
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||  | ||| ||||||||| | ||||| ||| |||||||||||||  ||||||||    
T  4016327 ggccagtgcgcatgcctctacacacgagccggattagttgctcaccattggtgggtcggaaaccagtgcgaaag 4016254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 9168325 - 9168268
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcg 73  Q
    |||| |||||||| |||||||| ||||| |||||||||||| |||||||  |||||||    
T  9168325 ggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcg 9168268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 9812907 - 9812980
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| |||||| |||||| ||||  |||||||||||  |||||||| |||||| ||||||| ||||||||    
T  9812907 ggccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 9812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 12766166 - 12766239
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| ||||  | |||||||||  |||||||| |||||| ||||||| ||||||||    
T  12766166 ggccagtgtgcatgcctctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12766239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 14974396 - 14974347
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttg 65  Q
    |||| |||| |||||||||||| ||||| |||||||||||| ||||||||    
T  14974396 ggccagtgcacatgcctctacgcatgagccggattagtcgtccacctttg 14974347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 20682689 - 20682616
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| ||||||| |||  |||||||  ||||| |||||||| ||||||||    
T  20682689 ggccagtgcgcatgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaag 20682616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 30349614 - 30349687
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||| | |||||  | ||||||||| |||||| | |||| ||||||||| ||||||||    
T  30349614 ggccagtgcgcatgcctctatgcatgagctgaattagtcgtccaccttaggtgggccggaaaccggtgcgaaag 30349687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 38369734 - 38369807
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | |||||||||||||    ||||||||||||||  |||| || ||||||||    
T  38369734 ggccagtgcgcatgcctctacgcacgagtcggattagtaacccacctttgatgggttagaaatcggtgcgaaag 38369807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 38897791 - 38897718
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| ||||||||| |  |||||||| ||| |||||||||  ||||||||    
T  38897791 ggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcggaaaccagtgcgaaag 38897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 39728422 - 39728495
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| |||||||||||||   |||||| |||||||| |||||||||||  ||||||||||| ||| ||||    
T  39728422 ggccagtgtgcatgcctctacgctcgagtcgaattagtcgctcacctttgatacgtcggaaaccggtgcaaaag 39728495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 41163532 - 41163459
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||| ||||||| |||||  ||||||||||| |||||||  |||||||||||| | ||||||||    
T  41163532 ggccagtgcacatgtctctacgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgcgaaag 41163459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 12705058 - 12705122
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||| |||||| ||||  |||||||||||  |||||||| |||||| ||||||| ||||||||    
T  12705058 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 14235777 - 14235713
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||| ||||| | ||||||||||||||||   |||||||| |||||| ||||||||||| ||||    
T  14235777 gcatgactctaagcatgagtcggattagtcacccacctttggtgggtcagaaaccgatgcaaaag 14235713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 16757418 - 16757486
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| || ||| | |||| |||| || ||||  |||||| ||||||||||||||||    
T  16757418 gtgcgcatgcctctacgcataagttgaattaatcgtccatctttagtgggtcagaaaccgatgcgaaag 16757486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 20692978 - 20693042
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||||||||  | |||| || ||||||| || |||||||| |||||||||||||| |||||||||    
T  20692978 catgcctctgtgcatgattcagattagttgtccacctttggtgggtcggaaaccggtgcgaaagt 20693042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 22655220 - 22655157
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| || |||| |||||||||| |||||||| ||||||| |||||  ||||||||    
T  22655220 gcatgcctctacgcataagtcagattagtcgtccacctttg-tgggtcgaaaaccagtgcgaaag 22655157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 23247414 - 23247351
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| | ||| | |||||||||| |||||||||| ||||| |||||| ||||||||    
T  23247414 gcatgcctctacgcacgagccagattagtcgtccacctttgat-ggtcgaaaaccggtgcgaaag 23247351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 24653878 - 24653811
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||| |||||||| || || ||||||| |||| |||| ||| ||||||| |||||||||||||||    
T  24653878 gtgcgcatacctctacgcat-agccggattaatcgtccaccattggtgggtcgaaaaccgatgcgaaag 24653811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 19839367 - 19839434
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||||||||||||||| || ||||| |||||||||   ||||||  || |||||||| ||||||||||    
T  19839367 gtgcgcatgcctctacatacgagtcagattagtcgcctacctttagtgagtcggaaatcgatgcgaaa 19839434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 23260755 - 23260704
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaa 77  Q
    |||||||||||| | || ||||||||||| |  |||||||||||||||||||    
T  23260755 catgcctctacgcacgaatcggattagtcttctacctttgatgggtcggaaa 23260704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 2e-22; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 10927644 - 10927717
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  10927644 ggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaaag 10927717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 45521211 - 45521279
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| ||||||||    
T  45521211 gtgcgcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 45521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 43027349 - 43027416
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||||| ||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  43027349 tgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaag 43027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 4479368 - 4479296
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||| ||||||||||||||||| |||||  ||||||||||| |||||||| |||||||||||||| |||||||    
T  4479368 ggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 36662447 - 36662515
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||||||||  |||||||||||| ||| ||| |||| |||||||||||||||||||    
T  36662447 gtgcgcatgcctctacgtatgaaccggattagtcgtccacttttaatggatcggaaaccgatgcgaaag 36662515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 6100510 - 6100583
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||| ||||| ||||| ||||||||||||||||||||  ||||||| |||||| ||||||||    
T  6100510 ggccagtgcgcatgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaaag 6100583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 583855 - 583923
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||| |  ||||||| ||||||||    
T  583855 gtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaag 583923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 14846618 - 14846686
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||||| ||| |||||| |||||||| ||||||||||| || ||||||||    
T  14846618 gtgcgcatgcctctacgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgcgaaag 14846686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 15884623 - 15884556
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||||||||||||||| | ||| |||||||||||  |||||||| |||||||||||||| |||||||    
T  15884623 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 26570973 - 26571035
Alignment:
Q  27 atgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||| ||||| |||||||||||| ||||||||||| |||||||||||||| |||||    
T  26570973 atgcatctacgcatgagccggattagtcgtccacctttgatgagtcggaaaccgatgtgaaag 26571035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 8141140 - 8141213
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| |||||  | ||||||||| ||| |||| |||||| ||||||||||||||||    
T  8141140 ggccagtgcgcatgcctctacgcatgagctgaattagtcgtccacatttggtgggtcagaaaccgatgcgaaag 8141213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 8997608 - 8997543
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| |||| ||||| | ||||||||||||| ||||| |||||||||||||| ||||||||    
T  8997608 cgcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaag 8997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 18374053 - 18374122
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||||||||||| ||||| |||||||||||| || ||||| ||||||| |||||| ||| |||||    
T  18374053 gtgcgcatgcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtgcaaaagt 18374122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 39969982 - 39969914
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||  ||||||| |||||||||  || | ||||||| |||||||||||||||||||    
T  39969982 gtgcgcatgcctctacacatgagtcagattagtcgcccatcattgatggatcggaaaccgatgcgaaag 39969914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 993232 - 993299
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||| |||||||||||||| ||||||||||| |||||||| ||| || |||| || ||||||||    
T  993232 tgcgcatgtctctacgtatgagttggattagtcgtccacctttggtggttcagaaatcggtgcgaaag 993299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 3379879 - 3379812
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||||| ||||||| | |||||||||||||||||| ||| |||| ||||||||||| || |||||||    
T  3379879 gtgcgcacgcctctatgcatgagtcggattagtcgtccacttttggtgggtcggaaatcggtgcgaaa 3379812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 24938628 - 24938570
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    |||||||||||||||| ||||  |||||||||| | |||||||||||| ||||||||||    
T  24938628 tgcgcatgcctctacgcatgaaccggattagtcatccacctttgatggatcggaaaccg 24938570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 23895606 - 23895679
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||| |||||||| | |||  |||||| |||| ||||||||||||||||||||| | ||||||||    
T  23895606 ggccagtgcgcatacctctacgcacgagatggattaatcgtccacctttgatgggtcggaaacgggtgcgaaag 23895679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 33935807 - 33935735
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| |||| ||||||||||||||||| |||||| ||||  || ||||||| |||||||||    
T  33935807 ggccagtgcgcatgcctatacgcatgagtcggattagtcgctcacctctgat-agttggaaaccaatgcgaaag 33935735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 43032939 - 43033012
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||  | ||| |||||||||||  |||||||| |||||| ||||||| ||||||||    
T  43032939 ggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 43033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 44893350 - 44893277
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| | ||| ||||||| ||| ||||| |||||||||||||||||| ||| ||||    
T  44893350 ggccagtgtgcatgcctctacgcacgagccggattaatcgctcacccttgatgggtcggaaaccggtgcaaaag 44893277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 68141 - 68097
Alignment:
Q  45 cggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||    
T  68141 cggattaatcgttcacctttgatgggtcggaaaccggtgcaaaag 68097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 11298334 - 11298266
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||| | ||||| |  |||| ||| ||||||||| |||||||||||||| ||||||||    
T  11298334 gtgcgcatgcctctatgcatgagccaaattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 11298266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 29933820 - 29933870
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaa 76  Q
    |||||||||||||||||| |||||||||||  | ||||||||| |||||||    
T  29933820 catgcctctacgtatgagccggattagtcgcacccctttgatgagtcggaa 29933870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 2467190 - 2467117
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||| ||||| | ||||| |||||||||||| |||  ||| || ||||||||||| ||||||||    
T  2467190 ggccagtgcgcatgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaag 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 9860067 - 9859994
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||  ||||| | |||||||||| |||| ||| ||| |||||||||||||| ||||    
T  9860067 ggccagtgtgcatgcctctacacatgagccagattagtcgtccaccattggtggatcggaaaccgatgcaaaag 9859994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 33401862 - 33401798
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||||||| |||||||||||||||||  |||||||  ||| ||  ||||||||||||||||    
T  33401862 gcatgcctctacgcatgagtcggattagtcgcccacctttagtggatc-aaaaccgatgcgaaagt 33401798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 2964123 - 2964187
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| | ||  |||||||||||  |||||||| |||||| ||||||| ||||||||    
T  2964123 gcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 2964187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 3692876 - 3692944
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||| |||||||| ||||| || |||| ||||||||||||| | ||||| |||||| | ||||||    
T  3692876 gtgcgcatacctctacgcatgagccgaattaatcgttcacctttggtaggtcgaaaaccggtacgaaag 3692944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 4772094 - 4772054
Alignment:
Q  45 cggattagtcgttcacctttgatgggtcggaaaccgatgcg 85  Q
    |||||||||||| |||||||| |||||||||||||| ||||    
T  4772094 cggattagtcgtccacctttggtgggtcggaaaccggtgcg 4772054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 10535471 - 10535403
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| ||| ||| ||||| || |||||||||||||||||| |  ||||||||| | ||||||||    
T  10535471 gtgcgcatgtctccacgcatgagccgaattagtcgttcacctttggtaagtcggaaactggtgcgaaag 10535403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 12754068 - 12754128
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccga 81  Q
    ||||||||||||||| | |  |||| ||||||||| ||| ||||||||| |||||||||||    
T  12754068 gtgcgcatgcctctatgcacaagtcagattagtcgctcatctttgatggatcggaaaccga 12754128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 11785962 - 11786017
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    ||||||||||||| ||||| | ||||| ||| ||| ||||||||| ||||||||||    
T  11785962 gcatgcctctacgcatgagccagattaatcgctcatctttgatggatcggaaaccg 11786017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 2e-22; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 17748454 - 17748381
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||||| ||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  17748454 ggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttgggtcggaaaccgatgcgaaag 17748381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 48551900 - 48551967
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||| ||||||||    
T  48551900 tgcgcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaag 48551967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 13095895 - 13095968
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||| ||| ||||    
T  13095895 ggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaag 13095968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 38578939 - 38578866
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||  |||||||| |||||||||||||| ||||||||    
T  38578939 ggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 48804720 - 48804793
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||| |||| ||| |||||||||||||| ||||||||    
T  48804720 ggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 48804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 3353461 - 3353535
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||||||||||||||||| | ||| |||||||||||| |||||||||||| || ||||||| |||||||||    
T  3353461 ggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaaagt 3353535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 41267987 - 41267929
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatg 83  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||||||||||||    
T  41267987 gcatgcctctacgcatgagttagattagtcgtccacctttgatgggtcggaaaccgatg 41267929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 24983486 - 24983417
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtc-ggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |||||||||||| |||| ||| |||||| |||||||||||||||||    
T  24983486 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtctggaaaccgatgcgaaag 24983417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 27028316 - 27028389
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||  |||||  |||||||||| ||||||||| |||||||||||||| ||||||||    
T  27028316 ggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 27028389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 43346851 - 43346778
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||||| ||| ||||||||||| ||| ||||| |||||||||||||  ||||||||    
T  43346851 ggccggtgcgcatgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaag 43346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 43862044 - 43861971
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||| |||||||||| ||| ||| |||||| ||||||||    
T  43862044 ggccagtgcgcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaag 43861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 4195269 - 4195201
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |||||||| ||| |||| ||| ||||| |||||||||||||||||    
T  4195269 gtgcgcatgcctctacgcatgagccggattagccgtccaccattggtgggttggaaaccgatgcgaaag 4195201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 18785706 - 18785777
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaa 87  Q
    |||| ||||||||||||||||| ||||   ||||||||||||||||| || |||||||||||||| ||||||    
T  18785706 ggccagtgcgcatgcctctacgcatgaactggattagtcgttcacctctggtgggtcggaaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 32768984 - 32769047
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||| | ||||||||||||||||||||||||| ||| |||||||||| || |||||    
T  32768984 catgcctctacgcacgagtcggattagtcgttcacctttggtggatcggaaaccggtgtgaaag 32769047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 45960070 - 45960011
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    ||||||||||||||||| || || ||||||||||| ||||||||||||| ||||||||||    
T  45960070 gtgcgcatgcctctacgcataagccggattagtcgctcacctttgatggatcggaaaccg 45960011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 41945510 - 41945584
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||||||||||||||||| | ||| |||||||||||| |||||||| || |||||||| || |||||||||    
T  41945510 ggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaagt 41945584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 45697257 - 45697199
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    ||||||||||||||||| |||||| || |||||||| |||||||| |||||||||||||    
T  45697257 gtgcgcatgcctctacgcatgagttgggttagtcgtccacctttggtgggtcggaaacc 45697199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 3603399 - 3603468
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||||||||||| | ||| ||||||| |||||||| |||| ||||||||||| || |||||||||    
T  3603399 gtgcgcatgcctctacgcacgagccggattaatcgttcacttttggtgggtcggaaatcggtgcgaaagt 3603468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 24969398 - 24969325
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||| ||||||||||||  |||||||||| ||| ||| ||||||||| |||||||||| ||||||||    
T  24969398 ggccagtgcgcgtgcctctacgtacaagtcggattaatcgctcatctttgatggctcggaaaccggtgcgaaag 24969325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 39420874 - 39420947
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||| |||||||||| ||||| ||||||||||||  |||||||||||| ||||||||| ||| ||||    
T  39420874 ggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgcaaaag 39420947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 5069878 - 5069814
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| |  || |||||||||||  |||||||| |||||||||||||||||||||||    
T  5069878 gcatgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 5069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 27875160 - 27875088
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||| |||| |||||||||||| |||||||| ||||||||| |||||||  ||||||| |||||| |||||||    
T  27875160 ggccagtgcacatgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcgaaa 27875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 43925554 - 43925622
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |||||  |||||||| ||| ||||||||||| || |||||||||| |||||    
T  43925554 gtgcgcatgcctctacgcatgagctggattagttgtttacctttgatggatcagaaaccgatgtgaaag 43925622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 28396227 - 28396168
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    |||||||||||| |||| ||||| ||||||||||||  ||||||| ||||||||||||||    
T  28396227 gtgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtcggaaaccg 28396168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 10047948 - 10047875
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||| ||||||||| |||||  | ||||||||| |||| ||| |||||||||||||| ||||||||    
T  10047948 ggccagtgcgcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 10047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 22993439 - 22993366
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| | ||  ||||||||||| ||||||||| |||||| ||||||| ||||||||    
T  22993439 ggccagtgtgcatgcctctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaag 22993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 28744207 - 28744272
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||| ||||||| || ||| |||||||||||| |||||||| |||||||||||| | ||||||||    
T  28744207 cgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 28744272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 42032149 - 42032206
Alignment:
Q  32 tctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||| ||||| || |||||| || ||||||||||||||||||||||||||| ||||    
T  42032149 tctacgcatgagccgaattagttgtccacctttgatgggtcggaaaccgatgctaaag 42032206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 42210334 - 42210261
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| ||||||| ||   |||| ||| |||||||||||||||||||||||    
T  42210334 ggccagtgcgcatgcctctacgcacgagccggattaatcacccaccgttggtgggtcggaaaccgatgcgaaag 42210261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 44961702 - 44961637
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||| ||||||||| ||||| |||||||  | | ||||||||||||||||||||| ||||||||    
T  44961702 cgcatgtctctacgtacgagtcagattagttatccgcctttgatgggtcggaaaccggtgcgaaag 44961637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 47341913 - 47341986
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | |||  ||||| |||||||||| ||| ||||||||||| || ||||||||    
T  47341913 ggccagtgcgcatgcctctacgcacgagcaggattggtcgttcaccattggtgggtcggaaatcggtgcgaaag 47341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 48244416 - 48244355
Alignment:
Q  28 tgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||| ||||| ||||||||||| ||||||||| ||| ||| |||||| ||||||||    
T  48244416 tgcctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgcgaaag 48244355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 8734753 - 8734685
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| ||| | ||| | |||||||||  |||||||| |||||||||||||| ||||||||    
T  8734753 gtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 8734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 29151982 - 29152050
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||  | ||  ||||||| ||||  ||| |||||||||||||||||||||||||||    
T  29151982 gtgcgcatgcctctacacacgatccggattaatcgtctaccattgatgggtcggaaaccgatgcgaaag 29152050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 39474982 - 39475050
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||| |||||||| ||||| |||||||||||| |||||||  ||||||| |||||  ||||||||    
T  39474982 gtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgcgaaag 39475050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 48224798 - 48224730
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||  ||||||||||||||  ||||||| |||| ||||| ||||||| ||||| |||||||||    
T  48224798 gtgcgcatgtatctacgtatgagtcaaattagtccttcatctttggtgggtcgaaaaccaatgcgaaag 48224730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 14650365 - 14650427
Alignment:
Q  27 atgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||| ||||| ||| ||||||| ||||||||| ||||| | |||||| ||||||||    
T  14650365 atgcctctacgcatgagccgggttagtcgctcacctttggtgggttgaaaaccggtgcgaaag 14650427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 1605978 - 1606051
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||||||||| |  |||| |||||||||||  |||||||| ||| |||||||||| ||||||||    
T  1605978 ggccagtgcacatgcctctaggcttgagccggattagtcgcccacctttggtggatcggaaaccggtgcgaaag 1606051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 37514963 - 37515032
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||| ||||||| | ||| ||||||| ||||||||| ||  |||||||||||||| || ||||||    
T  37514963 gtgcgcatgtctctacgcacgagccggattaatcgttcaccattagtgggtcggaaaccggtgtgaaagt 37515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 942618 - 942682
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||| |||||| ||| ||||||||||||||||||  |||||||| ||| ||| || ||||||||    
T  942618 gcatgtctctacatataagtcggattagtcgttcatatttgatggatcgaaaatcggtgcgaaag 942682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 21530790 - 21530858
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| | ||| || |||| ||| ||||||||| |||||||||||||| | ||||||    
T  21530790 gtgcacatgcctctacgcacgagccgaattaatcgctcacctttggtgggtcggaaaccggttcgaaag 21530858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 22573854 - 22573922
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||| |||| ||||| ||||||| |||| || | ||||||||| | |||||| ||||||||    
T  22573854 gtgcgcatgcctttacgcatgagccggattaatcgtccatcattgatgggttgaaaaccggtgcgaaag 22573922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 23060731 - 23060763
Alignment:
Q  33 ctacgtatgagtcggattagtcgttcacctttg 65  Q
    ||||| |||||||||||||||||||||||||||    
T  23060731 ctacgcatgagtcggattagtcgttcacctttg 23060763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 26423347 - 26423288
Alignment:
Q  28 tgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||||||||| | ||| | ||||||||||||||||||| | |||||||||||| |||||||    
T  26423347 tgcctctacgcacgagccagattagtcgttcacctttggt-ggtcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 34659268 - 34659336
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| |||||||||||  |||| ||| || |||| |||||| ||||||||    
T  34659268 gtgcgcatgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaag 34659336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 4973176 - 4973133
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttg 65  Q
    |||||||||||||||||| ||| |||||||||||| || |||||    
T  4973176 tgcgcatgcctctacgtacgagccggattagtcgtccagctttg 4973133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 5039485 - 5039426
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    |||| ||| |||||||| ||||| ||||||||||| ||||||||| ||| ||| ||||||    
T  5039485 gtgcacatacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccg 5039426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 36619317 - 36619270
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtc 72  Q
    ||||||||||||| ||||| |||||||||||| |||| ||| ||||||    
T  36619317 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 36619270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 2e-22; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 5855557 - 5855630
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  5855557 ggccagtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaaag 5855630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 32142919 - 32142846
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| |||| ||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  32142919 ggccagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttgatgggtcggaaaccgatgcgaaag 32142846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 5504071 - 5504140
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| | |||||||    
T  5504071 gtgcacatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaaagt 5504140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 49078149 - 49078222
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||| ||| | |||||||||||| ||||||||    
T  49078149 ggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaaag 49078222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 26325852 - 26325920
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |||||||||||| |||| ||| |||||||||||||| ||||||||    
T  26325852 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 32150990 - 32150922
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||| |||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||    
T  32150990 gtgcgcatgcctttacgcatgagccgaattagtcgctcacctttgatgggtcgaaaaccgatgcgaaag 32150922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 11397956 - 11397889
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||| |||||||||||||||||| |||||||| ||||||||||| || ||||||||    
T  11397956 tgcgtatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaag 11397889  T

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Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 4581755 - 4581682
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||| ||||||| |||||||| |||||||||||||| ||||||||    
T  4581755 ggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4581682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 8764026 - 8764099
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||||| |||| ||| |||||||||||||| ||||||||    
T  8764026 ggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 10422823 - 10422896
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||| |||||||| |  ||||||||||| ||||||||    
T  10422823 ggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaag 10422896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 17642077 - 17642004
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||||| |||||||| |||||||||||| | ||||||||    
T  17642077 ggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 17642004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 45361955 - 45361882
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||| ||||| || || ||||||||||||||||||||  |||||||||||||| ||||||||    
T  45361955 ggccagtgcgcatgccactacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 45361882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 9659247 - 9659179
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||| |||| ||||| |||||||||||| |||||||| ||||| |||||||| ||||||||    
T  9659247 gtgcgcatgcctttacgcatgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaag 9659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 34697379 - 34697443
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| ||||| |||||||||||  ||| |||||||||| |||||||||||||||||    
T  34697379 gcatgcctctacgcatgagccggattagtcgcccacttttgatgggttggaaaccgatgcgaaag 34697443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 34719816 - 34719884
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||||| ||||||||| ||||||||| |||||||||||| | ||||||||    
T  34719816 gtgcgcatgcctctacgcacgagtcagattagtcgctcacctttggtgggtcggaaactggtgcgaaag 34719884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 41663924 - 41663856
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |||||  ||||||||||| |||| ||| |||||||||||||| ||||||||    
T  41663924 gtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 10336556 - 10336619
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgc 84  Q
    ||||||||||||||||| ||||| ||||||| |||| |||||||||||| ||| ||||||||||    
T  10336556 gtgcgcatgcctctacgcatgagccggattaatcgtccacctttgatggatcgaaaaccgatgc 10336619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 14254333 - 14254278
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    ||||||||| |||| ||||| |||||||||||| ||||||||||||||||||||||    
T  14254333 cgcatgcctttacgcatgagccggattagtcgtccacctttgatgggtcggaaacc 14254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 16263580 - 16263654
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||||||||||||||||| || || |||| ||||||| ||| |||||||| |||||||||| |||||||||    
T  16263580 ggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttttgatggatcggaaaccggtgcgaaagt 16263654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 10173044 - 10172971
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||||||||||| ||||| ||||||| |||  |||||||| |||||||||||||| ||||||||    
T  10173044 ggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaag 10172971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 26660181 - 26660245
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||| ||||| |||||||||||  |||||||| |||||||||||||| ||||||||    
T  26660181 cgcatgcctctacgcatgagccggattagtcg-ccacctttggtgggtcggaaaccggtgcgaaag 26660245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 33498912 - 33498859
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgg 69  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  33498912 ggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgg 33498859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 14357795 - 14357863
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||  ||||||| ||||| ||| |||||||||||||||||| ||||||||    
T  14357795 gtgcgcatgcctctacgcacgaaccggattaatcgtttaccattgatgggtcggaaaccggtgcgaaag 14357863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 15466005 - 15466073
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| | ||||| |||| |||| ||||||||| |||||||||||||||| ||||||    
T  15466005 gtgcacatgcctctacgcacgagtctgattggtcgctcacctttggtgggtcggaaaccgatacgaaag 15466073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 16956506 - 16956574
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| ||||||||||  ||||||||| |||||||||||||  ||||||||    
T  16956506 gtgcgcatgcctctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcgaaag 16956574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 18708608 - 18708540
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||  ||||| | ||||||||| ||||||||||||||| | |||||||||| ||||    
T  18708608 gtgcgcatgcctctacacatgagccagattagtcgctcacctttgatgggttgaaaaccgatgctaaag 18708540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 46929805 - 46929738
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||| ||  ||||| |||||||||||| ||| |||||||| ||| |||||||||||||||    
T  46929805 tgcgcatgcctccacacatgagccggattagtcgtccacttttgatggatcgaaaaccgatgcgaaag 46929738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 41696660 - 41696598
Alignment:
Q  27 atgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||| | || || ||||||||| ||||||||||||| |||||||| ||||||||||    
T  41696660 atgcctctacgcacgaatcagattagtcgctcacctttgatggatcggaaactgatgcgaaag 41696598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 18915902 - 18915975
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| | ||| ||||||||||| ||||| ||| ||||| |||||||| ||||||||    
T  18915902 ggccagtgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 18915975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 35211237 - 35211172
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||| |||||  | ||||||||| |||||||| |||||||||||||| || |||||    
T  35211237 cgcatgcctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgtgaaag 35211172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 37339855 - 37339928
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||| ||| | ||| |||||||||||  |||||||| ||||| |||||||| ||||||||    
T  37339855 ggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaag 37339928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 43959894 - 43959821
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||||  |||||||  ||| |||||||||| ||||||||    
T  43959894 ggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 43959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 45726506 - 45726433
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||| ||| ||||||| ||||| ||||||||||||||||||||| ||| ||||| || | ||||||||    
T  45726506 ggccagtgcgtatgtctctacgcatgagccggattagtcgttcacctttggtggatcggagactggtgcgaaag 45726433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 50094947 - 50095012
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||| |||||| |||||||||||||||||| |||| ||  |||||||||||||| ||| ||||    
T  50094947 cgcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtgcaaaag 50095012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 32911 - 32979
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| ||||| || |||||||||  || |||||||| |||||||||||| ||||||    
T  32911 gtgcacatgcctctacgcatgagccgaattagtcgtctacttttgatggatcggaaaccgatacgaaag 32979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 1764253 - 1764197
Alignment:
Q  33 ctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||| ||||| |||||||||||  |||||||||| |||||||||| ||||||||||    
T  1764253 ctacgcatgaggcggattagtcgcccacctttgataggtcggaaactgatgcgaaag 1764197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 6899598 - 6899666
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||| |||| |  || |||||||||||  |||||||||||| |||||||||| ||||||||    
T  6899598 gtgcgcatgcctttacgcacaagccggattagtcgcccacctttgatggatcggaaaccggtgcgaaag 6899666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 30927791 - 30927727
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| ||||| |||||||||||| ||| |||| |||||| ||||||| ||| ||||    
T  30927791 gcatgcctctacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgcaaaag 30927727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 38791678 - 38791610
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| || ||||||||| || ||||||||| ||  |||||||| ||||||    
T  38791678 gtgcgcatgcctctacgcatgagccgaattagtcgtccatctttgatggatcaaaaaccgatacgaaag 38791610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 50503429 - 50503361
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| |||||| ||||  ||||  || |||||||||||||||||||||||    
T  50503429 gtgcgcatgcctctacgcacgagccggatttgtcgcccaccaatggtgggtcggaaaccgatgcgaaag 50503361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 33418188 - 33418125
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    |||| ||||||||||||||| | | ||| |||||||||||| |||||||| | |||||||||||    
T  33418188 ggccagtgcgcatgcctctatgcacgagccggattagtcgtccacctttggtcggtcggaaacc 33418125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 51437515 - 51437565
Alignment:
Q  39 atgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||| |||||||||| | |||||||| |||||||||||||| ||||||||    
T  51437515 atgagccggattagtcatccacctttggtgggtcggaaaccggtgcgaaag 51437565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 2567311 - 2567384
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||  | ||||| |||||| ||| || ||||| |||||||||||||| | ||||||    
T  2567311 ggccagtgcgcatgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaag 2567384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 2981004 - 2980931
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| | |||||||||||||||| ||  |||  ||||||||||| || ||||||||    
T  2981004 ggccagtgtgcatgcctctacgcacgagtcggattagtcgtccatgtttagtgggtcggaaatcggtgcgaaag 2980931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 3850799 - 3850742
Alignment:
Q  32 tctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||| | ||| |||||||||||  ||||||| ||||||||||||||| ||||||||    
T  3850799 tctacgcacgaggcggattagtcgcccacctttaatgggtcggaaaccggtgcgaaag 3850742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 10507733 - 10507806
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| |||| |||||||| ||||| |||||||||||| ||||  || ||||||||||||| || ||||||    
T  10507733 ggccagtgtgcatacctctacgcatgagccggattagtcgtccaccactggtgggtcggaaaccaattcgaaag 10507806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 13262126 - 13262187
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcg 85  Q
    |||||| ||||||| | |||||||||||||||| |||| |||| || ||| |||||||||||    
T  13262126 cgcatgtctctacgcacgagtcggattagtcgtccaccattgaaggatcgaaaaccgatgcg 13262187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 21849273 - 21849204
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||||||||||| | ||| ||||||||||| ||||  ||| ||||||| |||||| | |||||||    
T  21849273 gtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggtacgaaagt 21849204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 25178649 - 25178576
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||| |||||||  |  || ||||||||||||||||||||  ||||||| |||||||| ||||||    
T  25178649 ggccagtgcgcatacctctacagacaagccggattagtcgttcacctttagtgggtcgaaaaccgatacgaaag 25178576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 31576608 - 31576547
Alignment:
Q  28 tgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||| ||||| ||| |||||||| || |||||||| ||||||||||| ||| ||||    
T  31576608 tgcctctacgcatgagccggcttagtcgtccatctttgatgtgtcggaaaccggtgcaaaag 31576547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 35908798 - 35908864
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |||||||||||| |||| |   |||||||||||||| ||| ||||    
T  35908798 gtgcgcatgcctctacgcatgagccggattagtcgtccaccat--gtgggtcggaaaccggtgcaaaag 35908864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 17389811 - 17389879
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| ||| |||||  ||||||||||| ||    ||||||||||||||||| ||||||||    
T  17389811 gtgcgcatgcctccacgcatgagctggattagtcgtccattgctgatgggtcggaaaccggtgcgaaag 17389879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 89
Target Start/End: Original strand, 40702591 - 40702622
Alignment:
Q  58 cacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||||||||| ||||||||    
T  40702591 cacctttgatgggtcggaaaccggtgcgaaag 40702622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 47219183 - 47219251
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  47219183 gtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 45877488 - 45877562
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| |||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  45877488 ggccagtgcacatgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaagt 45877562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 54261260 - 54261334
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||| |||||||||    
T  54261260 ggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagt 54261334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 45402424 - 45402355
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcg 85  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||| ||||||    
T  45402424 ggcctgtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaactgatgcg 45402355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 3136762 - 3136694
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| | |||||||||||| ||||||||    
T  3136762 gtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaag 3136694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 23511606 - 23511674
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||| ||||||||    
T  23511606 gtgcgcatgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgcgaaag 23511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 29127958 - 29128026
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |||||||||||  |||||||| |||||||||||||||||||||||    
T  29127958 gtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 29128026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 47471870 - 47471939
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||||||||| |||||| ||||| || ||||||||| |||||||| ||||||||||||||||||||||||    
T  47471870 gtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccgatgcgaaagt 47471939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 3507606 - 3507534
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||| ||||||||||||||||| | ||| ||||||||||| ||||||||| |||||||||||||| |||||||    
T  3507606 ggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 49021271 - 49021203
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |||||||||||| |||| ||| |||||||||||||| ||||||||    
T  49021271 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 49021203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 53649761 - 53649833
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||| |||||| || ||||||| ||||| ||||||||||||||||||||||||| |||||||||| |||||||    
T  53649761 ggccagtgcgcctgtctctacgcatgagccggattagtcgttcacctttgatggatcggaaaccggtgcgaaa 53649833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 35315990 - 35316063
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| |||||  ||||||||||  ||| |||| |||||||||||||||||||||||    
T  35315990 ggccagtgcgcatgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaaag 35316063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 7310767 - 7310703
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| | ||| ||||||||||| ||| ||||| |||||||||||||||||||||||    
T  7310767 gcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaag 7310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 44064584 - 44064651
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||| |||||||||||||| ||| ||||    
T  44064584 tgcgcatgcctctacgcatgaaccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaag 44064651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 22909822 - 22909891
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||||||| | |||||| ||||| || ||||||||| ||||||||||||||||||||||  |||||||||    
T  22909822 gtgcgcatacttctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaaccagtgcgaaagt 22909891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 25294994 - 25295067
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||| | ||||| |||||||||||| |||| ||| ||||| |||||||| ||||||||    
T  25294994 ggccagtgcgcatgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaag 25295067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 26043846 - 26043919
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||||||| ||||||||| || ||| |||||||  |||||||    
T  26043846 ggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccggggcgaaag 26043919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 29762228 - 29762155
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||| | |||||  ||||||||||| |||| ||| |||||||||||||| ||||||||    
T  29762228 ggccagtgcgcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 29762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 47749178 - 47749105
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| || ||||||||  |||||||| | |||||||||||||||||||||    
T  47749178 ggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaag 47749105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 50753410 - 50753341
Alignment:
Q  20 tgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||| | ||||||||||||||||||| | ||| |||||||||||||| ||| ||||    
T  50753410 tgtgtgcatgcctctacgcacgagtcggattagtcgttcatcattggtgggtcggaaaccggtgcaaaag 50753341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 24506716 - 24506648
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| ||||||| ||||||||| ||||| ||| |||||||||||||| ||| ||||    
T  24506716 gtgcacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtcggaaaccggtgcaaaag 24506648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 26362031 - 26361967
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| | ||| |||||||||||  ||||||||||||||||||||||| || |||||    
T  26362031 gcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaag 26361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 28572275 - 28572211
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| | ||| |||||||||||  |||||||| |||||||||||||| ||||||||    
T  28572275 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 28572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 49198385 - 49198457
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||| ||||||||||||||||| ||||| |||||||||||| |||| ||| ||| || |||||||||| ||||    
T  49198385 ggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggatcagaaaccgatgtgaaa 49198457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 51060349 - 51060281
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||   ||||||||||| |||| ||| |||||||||||||| ||||||||    
T  51060349 gtgcgcatgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 51060281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 50405671 - 50405612
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    ||||||||||||||||| | |||||||||||||||  |||| ||| ||||||||||||||    
T  50405671 gtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccg 50405612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 4638193 - 4638259
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaa 87  Q
    |||||||| |||||||| | ||| ||||||||| |  ||||||| ||||||||||||||||||||||    
T  4638193 gtgcgcatacctctacgcacgagccggattagtagcccacctttaatgggtcggaaaccgatgcgaa 4638259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 30045855 - 30045917
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    |||| ||||||||| ||||||| | ||||| |||||||||| |||||||||||||||| ||||    
T  30045855 ggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtcgtaaac 30045917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 32522018 - 32522076
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    |||||||||  | |||| ||||||| |||||||||| ||||||||||||||||||||||    
T  32522018 gtgcgcatgtatttacgcatgagtcagattagtcgtccacctttgatgggtcggaaacc 32522076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 33251696 - 33251758
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    |||| ||| ||||||||||||| ||||| |||||||||||| ||| |||||||||||| ||||    
T  33251696 ggccagtgtgcatgcctctacgcatgagccggattagtcgtccacatttgatgggtcgaaaac 33251758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 7328878 - 7328950
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| |||| ||||| |||||||||||  |||||||| ||||||| |||||| ||||||||    
T  7328878 ggccagtgcgcatgcct-tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 7328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 11393517 - 11393476
Alignment:
Q  47 gattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  11393517 gattagtcgtccacctttgattggtcggaaaccgatgcgaaa 11393476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 15320220 - 15320293
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| | ||| |||||||||||  |||||||| |||||| ||||||| ||||||||    
T  15320220 ggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 15320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 29135947 - 29136020
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||| | |||| ||| ||||| |||||||| | ||||||    
T  29135947 ggccagtgcgcatgcctctacgcatgagccggattagtcttccaccattggtgggttggaaaccggtacgaaag 29136020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 55069752 - 55069679
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||||||||||| | ||| ||||||| ||| ||||||||| |||||||||||||| ||| ||||    
T  55069752 ggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgcaaaag 55069679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 8683290 - 8683242
Alignment:
Q  39 atgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaa 87  Q
    ||||| |||||||||||| |||||||| ||||||||||||| |||||||    
T  8683290 atgagccggattagtcgtccacctttggtgggtcggaaacctatgcgaa 8683242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 15285801 - 15285753
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgg 69  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||||||    
T  15285801 gtgcgcatgcctctacacataagttggattagtcgttcacctttgatgg 15285753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 45450515 - 45450447
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| || ||   |||||||||| ||||||||||| || |||||||| ||||||||    
T  45450515 gtgcgcatgcctctacgcataagctagattagtcgtccacctttgatgagttggaaaccggtgcgaaag 45450447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 54237487 - 54237555
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| ||||||| ||||| ||||| |||||| |||| ||  |||||||||||||| ||||||||    
T  54237487 gtgcgcatgtctctacgcatgagccggataagtcgtccaccattagtgggtcggaaaccggtgcgaaag 54237555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 19147025 - 19147068
Alignment:
Q  46 ggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||    
T  19147025 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 19147068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 40660395 - 40660336
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    ||||||||||||||||| ||||  ||||||| || |||||||||| ||||||| ||||||    
T  40660395 gtgcgcatgcctctacgcatgaaccggattaatcattcacctttggtgggtcgaaaaccg 40660336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 52168637 - 52168570
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||| | ||  ||||| ||||||||||||||||  ||||||||||| |||||||||| ||||    
T  52168637 tgcgcatgccccaacacatgagccggattagtcgttcacaattgatgggtcgaaaaccgatgctaaag 52168570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 11249811 - 11249757
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    ||||| || |||||||||| ||||||||||||||||  |||||| ||||||||||    
T  11249811 gcatgtctttacgtatgagccggattagtcgttcactattgatgagtcggaaacc 11249757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 11687182 - 11687144
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtc 54  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  11687182 ggccagtgcgcatgcctctacgtatgagtcagattagtc 11687144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 25515811 - 25515749
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||| ||||||||||||| |||||||||| ||||| ||  ||| |||||||| |||||||||    
T  25515811 catgcttctacgtatgagttggattagtcgctcaccattagtggatcggaaactgatgcgaaa 25515749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 30767320 - 30767258
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    |||| ||| ||||||||||||| | ||| |||||||||||  |||||||| ||||||||||||    
T  30767320 ggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 30767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 8164587 - 8164648
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaa 77  Q
    |||| |||||||||||| |||| | |||||||||||||||  |||||||| ||| |||||||    
T  8164587 ggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaaa 8164648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 10040590 - 10040659
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcg 85  Q
    |||| ||||||||||||||||| | ||| |||| | ||||| |||||||| ||||| |||||||| ||||    
T  10040590 ggccagtgcgcatgcctctacgcacgagccggaatggtcgtccacctttggtgggttggaaaccggtgcg 10040659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 41630580 - 41630523
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    ||||||||||||||||  ||||| |||||||||||  |||||||| | ||||||||||    
T  41630580 gtgcgcatgcctctacacatgagccggattagtcgcccacctttggttggtcggaaac 41630523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 2029332 - 2029268
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||||||||||||| |||||  ||||||||||  |||| ||||||||||| |||||  |||||||    
T  2029332 cgcatgcctctacgcatgagctggattagtcgcccaccattgatgggtcgcaaaccagtgcgaaa 2029268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 7648779 - 7648847
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||| |||||||| | ||| |||||||||||  |||||||| ||||||| || || |||||||||    
T  7648779 gtgcgcatacctctacgcacgagccggattagtcgcccacctttgttgggtcgaaatccaatgcgaaag 7648847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 10043721 - 10043789
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| | ||| | ||||| ||| ||||| ||| |||||||||||||| ||||||||    
T  10043721 gtgcacatgcctctacgcacgaggcagattaatcgctcaccattggtgggtcggaaaccggtgcgaaag 10043789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 34374510 - 34374442
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| ||| || ||||||||||||||  |  ||||| |||||||||||||| || |||||    
T  34374510 gtgcgcatgcctcaacgcataagtcggattagtcgcccttctttggtgggtcggaaaccggtgtgaaag 34374442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 35923696 - 35923632
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    |||| ||||||||||||||| | | |||||| ||||||||| || ||||||||| ||| ||||||    
T  35923696 ggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatctttgatggatcgaaaaccg 35923632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 35998639 - 35998571
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| | |||| |||||| |||| |||||||  |||||| ||||||| ||||||||    
T  35998639 gtgcacatgcctctacgcacgagttggattaatcgtccacctttagtgggtcagaaaccggtgcgaaag 35998571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 36043718 - 36043674
Alignment:
Q  45 cggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||  |||||||| |||||||||||||| ||||||||    
T  36043718 cggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 36043674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 43330800 - 43330732
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| |||||||||||  |||||||| ||||||  |||||| | ||||||    
T  43330800 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtacgaaag 43330732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 48342059 - 48342127
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||  | |||||||||| || ||||| ||| |||||||| | ||||||||    
T  48342059 gtgcgcatgcctctacgcatgaaccagattagtcgtccatctttggtggatcggaaacaggtgcgaaag 48342127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 6462446 - 6462485
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcg 55  Q
    |||| ||||||||||||||||| ||||| |||||||||||    
T  6462446 ggccagtgcgcatgcctctacgcatgagccggattagtcg 6462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 13893966 - 13894033
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||||  | ||| |||||||||||  |||||||| ||| ||| |||||| ||||||||    
T  13893966 tgcgcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaag 13894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 40944926 - 40944972
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtc 72  Q
    ||||||||||||| ||||| ||||||||||| ||||||||| ||||||    
T  40944926 gcatgcctctacgcatgag-cggattagtcgctcacctttggtgggtc 40944972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 52364868 - 52364813
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaa 76  Q
    ||||||||||||||||| | |||  |||||| ||||  ||||||||||||||||||    
T  52364868 gtgcgcatgcctctacgcacgagctggattaatcgtctacctttgatgggtcggaa 52364813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 50; Significance: 6e-20; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 6892 - 6965
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||| ||||||||    
T  6892 ggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 6e-20; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 21898686 - 21898759
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||| ||||||||    
T  21898686 ggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 21898759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 5253295 - 5253222
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||| |||  |||||||| |||||||||||||| ||||||||    
T  5253295 ggccagtgcgcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaag 5253222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 8888920 - 8888992
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||| |||||||| |||||||||||||||||| |||||||||||| ||| ||||| |||||||||    
T  8888920 ggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttgatggatcgaaaacc-atgcgaaag 8888992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 9633697 - 9633624
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||||  |||||||| |||||||||||||| ||||||||    
T  9633697 ggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 9633624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 34954691 - 34954618
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| ||| |||||||| ||||| | |||||||||| |||||||||||||||||||||| |||||||||    
T  34954691 ggccagtgcacatacctctacgcatgagccagattagtcgtccacctttgatgggtcggaaaccaatgcgaaag 34954618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 2105152 - 2105092
Alignment:
Q  29 gcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||  |||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  2105152 gcctctacgtacaagtcggattagtcgctcactttttatgggtcggaaaccgatgcgaaag 2105092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 5029860 - 5029928
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |||||| ||||||||||  || |||||||||||||||||| | ||||||||    
T  5029860 gtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaag 5029928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 8932704 - 8932772
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| ||||||| ||   ||||||||||||||||||||||| ||||||||    
T  8932704 gtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8932772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 8938754 - 8938822
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||| || |||||| ||||| || ||||||||| ||||||||||||||||||||||| ||||||||    
T  8938754 gtgcgcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaag 8938822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 8944170 - 8944238
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| ||||||| ||   ||||||||||||||||||||||| ||||||||    
T  8944170 gtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8944238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 14783483 - 14783419
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| ||||| |||||||||||| |||| ||| |||||||||||||| ||||||||    
T  14783483 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 14783419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 30410488 - 30410556
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |||||  |||||| ||| ||| ||||| |||||||||||||||||||||||    
T  30410488 gtgcgcatgcctctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccgatgcgaaag 30410556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 6606159 - 6606096
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||| ||||| |||||||||||| |||| ||| |||||||||||||| ||||||||    
T  6606159 catgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 6606096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 3601122 - 3601195
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||| |||  | ||| |||||||||||| |||||||| |||||||||||||| ||||||||    
T  3601122 ggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 3601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 13036076 - 13036003
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| | |||||||||| |||  ||| |||||||||||||| ||||||||    
T  13036076 ggccagtgcgcatgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaag 13036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 19089536 - 19089609
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| | ||| ||||||||||||  ||||||| |||||||||||||| ||||||||    
T  19089536 ggccagtgagcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaag 19089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 30788925 - 30788852
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||| | | ||| |||||||||||  |||||||| |||||||||||||| ||||||||    
T  30788925 ggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 30788852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 31129220 - 31129288
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| | ||||||| || |||||||| || ||||||||||| ||||||||    
T  31129220 gtgcgcatgcctctacgcatgagccagattagttgtgcacctttggtgagtcggaaaccggtgcgaaag 31129288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 11142646 - 11142713
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||||||||||||||| ||||||| ||||||| || || ||||| ||||||||| |||| |||||||    
T  11142646 gtgcgcatgcctctacgcatgagtcagattagttgtccaactttggtgggtcggagaccggtgcgaaa 11142713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 2271370 - 2271312
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    ||||||||| ||||||| | ||| |||||||||||| ||||||||||||||| ||||||    
T  2271370 gtgcgcatgtctctacgcacgagccggattagtcgtccacctttgatgggtcagaaacc 2271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 29444837 - 29444775
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    |||| ||||||||||||||||| ||||| ||||||||| || || ||||| ||||||||||||    
T  29444837 ggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaac 29444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 3030690 - 3030641
Alignment:
Q  41 gagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||||||||| |||| |||| ||||||||||||||||| ||||||    
T  3030690 gagtcggattagtcgctcacatttggtgggtcggaaaccgatgtgaaagt 3030641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 3588017 - 3587944
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| ||| |||||||| ||||  ||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3588017 ggccagtgcacatacctctacgcatgaaccggattagtcgtcaacctttgatggatcggaaactgatgcgaaag 3587944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 21872959 - 21873004
Alignment:
Q  34 tacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||    
T  21872959 tacgtacgagttggattagtcgtccacctttgatgggtcggaaacc 21873004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 29333211 - 29333138
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| || || |||||| |||||||| | |||||| ||||| ||||||||    
T  29333211 ggccagtgcgcatgcctctacgcatgagccgaatcagtcgtccacctttggtaggtcggtaaccggtgcgaaag 29333138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 14326045 - 14326096
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaa 77  Q
    |||||||||||| ||||| ||||||||||| ||| ||||| |||||||||||    
T  14326045 catgcctctacgcatgagccggattagtcgctcatctttggtgggtcggaaa 14326096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 14419055 - 14419106
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaa 77  Q
    |||||||||||| ||||| ||||||||||| ||| ||||| |||||||||||    
T  14419055 catgcctctacgcatgagccggattagtcgctcatctttggtgggtcggaaa 14419106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 17114959 - 17114908
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaa 77  Q
    |||||||||||| ||||| |||||||||||  |||||||||| |||||||||    
T  17114959 catgcctctacgcatgagccggattagtcgcccacctttgataggtcggaaa 17114908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 32048511 - 32048550
Alignment:
Q  48 attagtcgttcacctttgatgggtcggaaaccgatgcgaa 87  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  32048511 attagtcgtcaacctttgatgggtcggaaaccgatgcgaa 32048550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 8149859 - 8149797
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||||||||||| || || || ||||||||| |||||||| ||||| |||||||| |||||||    
T  8149859 catgcctctacgcattagccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaa 8149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 12606468 - 12606541
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||||  |||||||| || |  |||||||| ||||||||    
T  12606468 ggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgagctggaaaccggtgcgaaag 12606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 8612037 - 8611973
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||| |||||| ||||  |||||||||||  |||||||| |||||| ||||||| ||||||||    
T  8612037 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 8611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 12635857 - 12635925
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |  || |||||||||||  |||  ||| |||||||||||||| ||||||||    
T  12635857 gtgcgcatgcctctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgcgaaag 12635925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 375046 - 374983
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    |||| ||||||||||||||| | |||||| ||||||||| |  | ||||||||||||| |||||    
T  375046 ggccagtgcgcatgcctctatgcatgagttggattagtcatctatctttgatgggtcgaaaacc 374983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 13391315 - 13391398
Alignment:
Q  7 acaatcttgggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||| || |||| ||||||||||||||||| | ||| |||||||||||  ||  ||| |||||||| |||||| ||| |||||    
T  13391315 acaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccatatttaatgggtcgaaaaccggtgcaaaagt 13391398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 2e-19; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 55921078 - 55921146
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||| ||||||||    
T  55921078 gtgcgcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 55921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 40780928 - 40780861
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||||| |||||||    
T  40780928 gtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 42722649 - 42722575
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||||  ||||||| |||||| |||||||||    
T  42722649 ggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaaagt 42722575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 43458652 - 43458726
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||||||||||||||||| | ||| |||||||||||| ||||||||||| ||||||||||| |||||||||    
T  43458652 ggccagtgcgcatgcctctacggacgagccggattagtcgtccacctttgatgagtcggaaaccgttgcgaaagt 43458726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 7246718 - 7246645
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||  |||||||| |||||||||||||| ||||||||    
T  7246718 ggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 46108735 - 46108798
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgc 84  Q
    ||||||||||||||||| ||||| | |||||||||| ||| |||||||||||||||||||||||    
T  46108735 gtgcgcatgcctctacgcatgagccagattagtcgtccacttttgatgggtcggaaaccgatgc 46108798  T

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Target: chr4; HSP #7
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 25406620 - 25406562
Alignment:
Q  31 ctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  25406620 ctctacgcatgaatcagattagtcgttcacctttgatgggtcggaaaccggtgcgaaag 25406562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 53354576 - 53354638
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatg 83  Q
    ||||||||||||||||| || | |||||||||||||||| ||||||||||||||||| |||||    
T  53354576 gtgcgcatgcctctacgcataaatcggattagtcgttcatctttgatgggtcggaaatcgatg 53354638  T

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Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 17080082 - 17080155
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||  |||||||||||| ||| |||||| ||||||||    
T  17080082 ggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaag 17080155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 29895826 - 29895899
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||| |||| ||| ||| |||||||||| ||||||||    
T  29895826 ggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaaag 29895899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 31588725 - 31588798
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||| ||||||| ||||| ||||||||||| |||| |||| ||| |||||||||||||||||||    
T  31588725 ggccagtgcgcatgtctctacgcatgagccggattagtcgctcacttttggtggatcggaaaccgatgcgaaag 31588798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 38075472 - 38075545
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| || |||| | || |||||||| |||||||||||||||||||||||    
T  38075472 ggccagtgcgcatgcctctacgcatgagccgaattaattgtccacctttggtgggtcggaaaccgatgcgaaag 38075545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 53599099 - 53599172
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||| ||||||||||||  ||| |||||||||| ||||||||    
T  53599099 ggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttagtggatcggaaaccggtgcgaaag 53599172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 14858754 - 14858822
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| ||||||||| ||||| ||||| |||| ||||||||||||||| ||||||| ||||||||    
T  14858754 gtgcgcatgtctctacgtacgagtcagattattcgtccacctttgatgggtcagaaaccggtgcgaaag 14858822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 36145282 - 36145214
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||  ||||| |||||||||||| |||||||||||  |||||||||| ||||||||    
T  36145282 gtgcgcatgcctctacacatgagccggattagtcgtccacctttgatgaatcggaaaccggtgcgaaag 36145214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 6032710 - 6032643
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||| |||||||||||| ||||| ||||||||||||  ||||||| |||||||||||||| |||||||    
T  6032710 gtgctcatgcctctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 6032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 8889066 - 8889125
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    ||||||||| ||||||| ||||| |||||||||||| |||||||| ||||||||||||||    
T  8889066 gtgcgcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccg 8889125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 38168305 - 38168368
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||| ||||| ||||||||||||||||||||  ||||| |||||||| ||||||||    
T  38168305 catgcctctacgcatgagccggattagtcgttcacctttagtgggttggaaaccggtgcgaaag 38168368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 40272403 - 40272340
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||| ||| |||||||||||||    
T  40272403 ggccagtgcgcatgcctctacgcataagtcggatttgtcgttcaccattggtgggtcggaaacc 40272340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 21429345 - 21429411
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaa 87  Q
    ||||||||||||||||| | ||||| || ||||||| |||||||| |||||||||||||| ||||||    
T  21429345 gtgcgcatgcctctacgcacgagtcagactagtcgtccacctttggtgggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 2559346 - 2559419
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| |  || ||||||| |||| |||||||| |||||||||||||| ||||||||    
T  2559346 ggccagtgcgcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaag 2559419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 6779250 - 6779323
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||| | ||||| |||||||||||| |||||||| ||  |||||| ||||||||||||    
T  6779250 ggccagtgcgcatgcctctatgcatgagccggattagtcgtccacctttggtgaatcggaacccgatgcgaaag 6779323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 13073568 - 13073649
Alignment:
Q  7 acaatcttgggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||| || |||| |||||||| |||||||| ||||  | ||||||||||| ||||||| |||||||||||||| |||||||    
T  13073568 acaatgtttggccagtgcgcatacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 14567278 - 14567351
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| ||||||||||| || |||||| ||||||||||| || ||||||||    
T  14567278 ggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaag 14567351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 16450339 - 16450412
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||||||||||| ||||| | |||||||||| |||||||| | |||||||||||| ||||||||    
T  16450339 ggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaag 16450412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 36262839 - 36262766
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||||||||||| | |||||||||||||||  |||||||| |||||| |||||| |||||||||    
T  36262839 ggccagtgcacatgcctctacgcacgagtcggattagtcgcccacctttggtgggtcagaaaccaatgcgaaag 36262766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 38166066 - 38166139
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||| ||||||| | ||| |||||||||||  |||||||| |||||||||||||| ||||||||    
T  38166066 ggccagtgcgcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38166139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 49952213 - 49952144
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgt-tcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||| ||||||||| ||||| |||||||||||  ||||||||||||||| |||||||| ||||||||    
T  49952213 gtgcgcacgcctctacgcatgagccggattagtcgcgtcacctttgatgggttggaaaccggtgcgaaag 49952144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 52950121 - 52950194
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||| ||||||  ||||  | |||||||||| |||||||| |||||||||||||||||||||||    
T  52950121 ggccagtgcgcatgactctacacatgaaccagattagtcgtccacctttggtgggtcggaaaccgatgcgaaag 52950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 4738662 - 4738730
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| ||||||| |||||  | ||||||||| |||||||| |||||||||||||| ||||||||    
T  4738662 gtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4738730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 45721131 - 45721199
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||| |||||||||| |  ||||||||||||||| ||||||| |||||| |||||||| |||||||||    
T  45721131 tgcgcgtgcctctacgcacaagtcggattagtcgtccacctttaatgggttggaaaccggtgcgaaagt 45721199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 26237489 - 26237422
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||| ||| || |||| ||||||||||||||| || |||| |||||||||||||||| |||||||||    
T  26237489 gtgcgtatgtctttacgcatgagtcggattagtagtccaccattgatgggtcggaaactgatgcgaaa 26237422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 14124055 - 14124129
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||||||||||||||||  | ||| ||||||||||| ||||| ||| ||||| |||||||| |||||||||    
T  14124055 ggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaagt 14124129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 20354681 - 20354739
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    ||||||||||||||||| |||||||||||||||||| |||  |||||| || |||||||    
T  20354681 gtgcgcatgcctctacgcatgagtcggattagtcgtccactattgatgagttggaaacc 20354739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 1940844 - 1940779
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcga 86  Q
    ||||||||||||||||| | ||| |||||||||||  |||||||| ||||||| |||||| |||||    
T  1940844 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 3159541 - 3159468
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| | ||||||||| ||||| ||| |||||||||||||| ||| ||||    
T  3159541 ggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaaccggtgcaaaag 3159468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 5472920 - 5472847
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||||  |||||||| ||||||| |||| | ||||||||    
T  5472920 ggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaaag 5472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 8064865 - 8064796
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||||||||||| ||||| |||||||||||| |||| || || ||||| |||||| ||| |||||    
T  8064865 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattaataggtcgaaaaccggtgcaaaagt 8064796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 16645157 - 16645230
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||  ||||||| |||||||||  ||||| || |||||||||||||| ||||||||    
T  16645157 ggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccggtgcgaaag 16645230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 24166489 - 24166562
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| | ||||||||   |||||||||||| |||||||||| ||||||||    
T  24166489 ggccagtgcgcatgcctctacgcacgagccagattagtcacccacctttgatggatcggaaaccggtgcgaaag 24166562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 47078497 - 47078570
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||||||||||| | ||| ||||||||||| ||||| ||| |||||||||||||  ||||||||    
T  47078497 ggccagtgcacatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaag 47078570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 48834772 - 48834699
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| ||||||||||   |||||||||||||||||   ||||||| |||||||||||||| ||||||||    
T  48834772 ggccagtgcacatgcctctatacatgagtcggattagtcgcctacctttggtgggtcggaaaccggtgcgaaag 48834699  T

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Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 49260737 - 49260676
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaa 77  Q
    |||| ||||||||||||||||| | ||| |||||||||||  |||||||| |||||||||||    
T  49260737 ggccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttggtgggtcggaaa 49260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 21192676 - 21192752
Alignment:
Q  13 ttgggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||| ||||||||||||||||| | ||||||||||| |||  ||| |||| || |||| |||||| ||||||||    
T  21192676 ttgggccagtgcgcatgcctctacgcacgagtcggattaatcgcccacatttggtgagtcgaaaaccggtgcgaaag 21192752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 29588780 - 29588848
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| |||||||||  | |||| ||| ||||||||||| |||||||||||    
T  29588780 gtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtcggaaatcgatgcgaaag 29588848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 38841431 - 38841367
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||| ||||||| |||||||||||||||||| || ||||| | | ||||||| |||||||||||    
T  38841431 gcatgtctctacgcatgagtcggattagtcgtccatctttggtagttcggaaatcgatgcgaaag 38841367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 3574518 - 3574471
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctt 63  Q
    |||| ||||||||||||||||| | ||||||||||||||| |||||||    
T  3574518 ggccagtgcgcatgcctctacgcacgagtcggattagtcgctcacctt 3574471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 20421812 - 20421875
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    |||| ||||||||||||||||| ||||| | ||||| |||| || | |||||||||||||||||    
T  20421812 ggccagtgcgcatgcctctacgcatgagccagattaatcgtccatcattgatgggtcggaaacc 20421875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 30317283 - 30317346
Alignment:
Q  27 atgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||||| | ||| || ||||||||  |||||||| ||||||||||||||||| ||||||    
T  30317283 atgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaaccgatgtgaaagt 30317346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 48656260 - 48656331
Alignment:
Q  18 cctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||| |||||||||  | |||||  |||||||| ||||||| ||||||| ||| |||||||||||||||    
T  48656260 cctgtgcacatgcctctctgcatgagctggattagttgttcaccattgatggatcgaaaaccgatgcgaaag 48656331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 1446865 - 1446910
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacc 61  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||    
T  1446865 ggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 1446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 2687372 - 2687303
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||||||||| ||||| ||| ||||||||||||| |||| |  || |||||||||||||| ||| |||||    
T  2687372 gtgcgcatgcttctacatataagtcggattagtcattcatcagtggtgggtcggaaaccggtgcaaaagt 2687303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 14597972 - 14597899
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||   ||||||||||| |||||||||||| ||| |||||| ||| ||||    
T  14597972 ggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtgcaaaag 14597899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 15840007 - 15839934
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||  |  ||||||| ||| |||||||  ||||||||    
T  15840007 ggccagtgcgcatgcctctacgcatgagccggattagtcgcccttctttgataggttggaaaccagtgcgaaag 15839934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 20532481 - 20532420
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaa 77  Q
    |||| ||||||||||||||||| ||||| ||||| |||||  |||||||| ||| |||||||    
T  20532481 ggccagtgcgcatgcctctacgcatgagccggataagtcgcccacctttggtggatcggaaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 23788441 - 23788494
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcgg 74  Q
    ||||||||||||||||| | |||  ||||||||||||||  |||||||||||||    
T  23788441 gtgcgcatgcctctacgcacgagctggattagtcgttcatttttgatgggtcgg 23788494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 31635814 - 31635745
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||| ||||||| |||||| |||||| |||  || |||||||||||| |||| |||||| |||||    
T  31635814 gtgcgcatgtctctacgcatgagttggattaatcgcccatctttgatgggtcagaaatcgatgcaaaagt 31635745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 47682454 - 47682381
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||| ||||||| | ||| ||| |||||||  |||||||| |||||||||||||| ||||||||    
T  47682454 ggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaag 47682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 50485990 - 50486055
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||| | ||| |||||||||||  |||| ||  |||||||||||||||||| ||||    
T  50485990 cgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaaccgatgcaaaag 50486055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 24850694 - 24850626
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |||||  |||||| || | |||| ||  ||| |||||||||||||||||||    
T  24850694 gtgcgcatgcctctacgcatgagctggattattcatccaccattattggatcggaaaccgatgcgaaag 24850626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 28944975 - 28945043
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| ||||||| |||||||||||||||||| || |||| |||  ||| |||||||| ||||||    
T  28944975 gtgcacatgtctctacgcatgagtcggattagtcgtccatctttaatgaatcgaaaaccgattcgaaag 28945043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 42722446 - 42722378
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||| |||||| | |||||||||||||||||| ||||  || ||||||| ||| || ||||||||    
T  42722446 gtgcgcatacctctatgcatgagtcggattagtcgtccaccaatggtgggtcgaaaatcggtgcgaaag 42722378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 54946296 - 54946352
Alignment:
Q  24 cgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    |||||||||||||| ||||| |||||||||||  || | ||| ||||||||||||||    
T  54946296 cgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccg 54946352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 14859335 - 14859402
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||||||| ||||||| | ||| | |||||||| | ||||||||||| ||||||||| | |||||||    
T  14859335 gtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaactggtgcgaaa 14859402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 9e-19; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 20116678 - 20116611
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||| ||||||||    
T  20116678 tgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaag 20116611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 7747308 - 7747381
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||| ||||||||    
T  7747308 ggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 7747381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 25540476 - 25540403
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||||| |||||||| |||||||||||||| ||||||||    
T  25540476 ggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 25540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 39201589 - 39201516
Alignment:
Q  7 acaatcttgggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    ||||| || |||| ||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  39201589 acaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccg 39201516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 41220669 - 41220742
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||||||  |||||||||||||| ||||||||    
T  41220669 ggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 18649093 - 18649025
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||| ||||| |||||||| ||||||||    
T  18649093 gtgcgcatgcctctacgcatgagtcggattagtcgctcacttttggtgggttggaaaccgttgcgaaag 18649025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 3643959 - 3643886
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| |||||  ||||||||||| |||||||| |||| ||||||||| ||||||||    
T  3643959 ggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaag 3643886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 22593168 - 22593240
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||| |||||||| |||||||| ||||| ||||||||    
T  22593168 ggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcgg-aaccggtgcgaaag 22593240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 33005785 - 33005858
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| | ||||| ||| ||||||||  |||||||||||||||||||||||    
T  33005785 ggccagtgcgcatgcctctacgcatgaggcagattaatcgctcacctttagtgggtcggaaaccgatgcgaaag 33005858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 34346359 - 34346286
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| ||||||| ||||| ||| ||||||||| |||||||||||||| ||||||||    
T  34346359 ggccagtgtgcatgcctctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 34346286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 10669626 - 10669690
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    |||| ||||||||| ||||||| | ||||||||||| ||||||||||||| ||||||||||||||    
T  10669626 ggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccg 10669690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 12455349 - 12455417
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| ||||||||||| ||||| ||| |||||||||||||| ||||||||    
T  12455349 gtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaag 12455417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 15234128 - 15234060
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |  |||  ||||||||||||| ||||||| |||||||||||||||||||||    
T  15234128 gtgcgcatgcctctacgcacaagttagattagtcgttcatctttgataggtcggaaaccgatgcgaaag 15234060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 2784971 - 2785038
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||||||||||||||| ||||||| |||||||||| || | |||||| ||||||||||| |||||||    
T  2784971 gtgcgcatgcctctacgcatgagtcagattagtcgtccatcattgatgagtcggaaaccggtgcgaaa 2785038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 3811757 - 3811690
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||||||| ||||| ||||||| |||  |||||||| |||||| ||||||||||||||||    
T  3811757 tgcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaag 3811690  T

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Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 3848979 - 3848912
Alignment:
Q  23 gcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||| |||  | |||||||||    
T  3848979 gcgcatgtctctacgcacgagtcggattagtcgttcacctttgatgggtcgaaaattggtgcgaaagt 3848912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 10026688 - 10026626
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    |||| ||||||||||||||||| ||||| |||||||||||  |||||||| ||||||||||||    
T  10026688 ggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 20963172 - 20963114
Alignment:
Q  26 catgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgc 84  Q
    |||||||||||||||||| | |||||||||  |||||||||||||||| ||||||||||    
T  20963172 catgcctctacgtatgaggcagattagtcgcccacctttgatgggtcgaaaaccgatgc 20963114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 44773321 - 44773371
Alignment:
Q  40 tgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||||||||||| |||||||||||||||||||||||| |||||||||    
T  44773321 tgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaagt 44773371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 6358223 - 6358150
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| |||||||||||| |||| ||| ||||||| |||||| || |||||    
T  6358223 ggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaag 6358150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 10046544 - 10046487
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    ||||||||||||||||| ||||| |||||||||||  |||||||| ||||||||||||    
T  10046544 gtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 10823094 - 10823167
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||||  |||||||  |||||||||||||| ||||||||    
T  10823094 ggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgcgaaag 10823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 12864263 - 12864332
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||||||||||||| || ||||| | |||||||||| |||| ||| |||||||||||||| |||||||||    
T  12864263 gtgcgcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagt 12864332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 14169676 - 14169607
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||| ||||||| ||||| ||||||||||||  ||| ||| |||||||||||||| |||||||||    
T  14169676 gtgcgcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaagt 14169607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 16325629 - 16325702
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| ||||| | |||||||||| |||| ||| |||||||||||||| ||||||||    
T  16325629 ggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 16325702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 26805330 - 26805403
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| |||||||||||| |||||||||||||||||  |||||||| ||| ||| |||||||||| ||||    
T  26805330 ggccagtgcacatgcctctacgcatgagtcggattagtcgcccacctttggtggctcgaaaaccgatgcaaaag 26805403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 38962797 - 38962870
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||  |||||||||||| |||||||| |||||| ||||| | ||||||||    
T  38962797 ggccagtgcgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaag 38962870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 16034980 - 16035044
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||| |||||| ||| ||||||||||| ||||| |||||| ||||||||||| ||||||||    
T  16034980 gcatgcctatacgtacgagccggattagtcgctcaccattgatgagtcggaaaccggtgcgaaag 16035044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 37560212 - 37560280
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| ||||||| |||| |||||||||||||||| |||||| || |||||    
T  37560212 gtgcgcatgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaag 37560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 28525527 - 28525465
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    |||| ||||||||||||||||| | ||| |||||||||| | ||||||| |||||||||||||    
T  28525527 ggccagtgcgcatgcctctacgcacgagccggattagtcatccacctttaatgggtcggaaac 28525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 8410165 - 8410238
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| |||||||||||  ||| ||||  ||||||||||||| ||||||||    
T  8410165 ggccagtgcgcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaag 8410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 11069912 - 11069985
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||| |||||||| | |||  | ||||||||| |||| ||| |||||||||||||||||||||||    
T  11069912 ggccagtgcgcatacctctacgcacgagctgaattagtcgtccaccgttggtgggtcggaaaccgatgcgaaag 11069985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 20612607 - 20612534
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcgg-attagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||| ||||||||||||||| | ||||| ||| ||||||||| |||| ||| |||||||||||||| |||||||    
T  20612607 ggccagtgcgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 34356245 - 34356302
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    ||||||||||||||| | ||||| ||||||| |||| |||| ||||||||||||||||    
T  34356245 gtgcgcatgcctctatgcatgagccggattaatcgtgcaccattgatgggtcggaaac 34356302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 38005436 - 38005509
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||  ||||| |||||||||||  |||||||| ||| |||||||| | ||||||||    
T  38005436 ggccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaag 38005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 42770723 - 42770650
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||||||||| || | ||| ||||||| |||| |||||||| ||||||| |||||||||| ||||    
T  42770723 ggccagtgcgcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaaccgatgcaaaag 42770650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 35946781 - 35946845
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||| | ||| |||||||||||| |||| ||| |||||||||||| | ||||||||    
T  35946781 gcatgcctctacgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaaag 35946845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 41187888 - 41187956
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| ||||||||||| ||| |  | |||| |||||||||||||| ||||    
T  41187888 gtgcgcatgcctctacgcatgagacggattagtcgctcatccataatggatcggaaaccgatgcaaaag 41187956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 44945632 - 44945700
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| |||||||||||  |||||||  ||| |||||||||| ||||||||    
T  44945632 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 44945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 331535 - 331598
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    |||| |||||||||| |||||| ||||| |||||||||||  |||||||| ||||| |||||||    
T  331535 ggccagtgcgcatgcttctacgcatgagccggattagtcgcccacctttggtgggttggaaacc 331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 30721922 - 30721888
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcg 55  Q
    ||||||||| |||||||||||||||||||||||||    
T  30721922 gtgcgcatgtctctacgtatgagtcggattagtcg 30721888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 39806957 - 39806883
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||||||||||||||||  | |||||||||||||| | |||||||| ||| ||  |||||| |||||||||    
T  39806957 ggccagtgcgcatgcctctacacacgagtcggattagtcatccacctttggtggttcataaaccggtgcgaaagt 39806883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 9360820 - 9360747
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| || ||||||||  |||||||  |||| ||||||||| ||||||||    
T  9360820 ggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaag 9360747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 13026483 - 13026410
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| ||||| ||||||||||   ||| |||| | |||| ||||||||||| ||||    
T  13026483 ggccagtgcgcatgcctctacgcatgagccggattagtcagccacttttggtaggtcagaaaccgatgcaaaag 13026410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 36480502 - 36480438
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    ||||||||||||||||| ||||| ||||   ||||| |||||||||||||||| ||| || |||||||    
T  36480502 gtgcgcatgcctctacgcatgagccgga---gtcgtccacctttgatgggtcgaaaatcggtgcgaaa 36480438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 41031978 - 41031905
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| | ||| ||||||||||   |||||||| |||||||||||||  ||||||||    
T  41031978 ggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaag 41031905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 44139518 - 44139591
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||| |||||||||| | ||| |||||||||||  ||||  || |||||||||||||| ||||||||    
T  44139518 ggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaag 44139591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 1773700 - 1773644
Alignment:
Q  32 tctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaa 88  Q
    |||||| |||||| ||||||||||| |||| ||| ||||||| |||||| |||||||    
T  1773700 tctacgcatgagttggattagtcgtccaccattggtgggtcgaaaaccggtgcgaaa 1773644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 2550907 - 2550975
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| ||||||| ||||| |||||||||||  ||| |||| ||||| | |||||| ||||||||    
T  2550907 gtgcgcatgtctctacgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaag 2550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 5035327 - 5035395
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| ||||||| | ||  ||||||| || | ||||||| |||||||||||||| |||||||||    
T  5035327 gtgcgcatgtctctacgcacgaaccggattaatcatccacctttaatgggtcggaaacccatgcgaaag 5035395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 18902597 - 18902529
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||| || ||||||| | ||| | |||||||||  |||||||| |||||||||||||| ||||||||    
T  18902597 gtgcgcgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 19976874 - 19976806
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||| ||||||| || ||||| ||||||||  |||||||||||  ||||||| || ||||||||    
T  19976874 gtgcgcatgtctctacgcataagtcgaattagtcgcccacctttgatgaatcggaaatcggtgcgaaag 19976806  T

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Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 20533158 - 20533214
Alignment:
Q  22 tgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaac 78  Q
    |||||||||||||||||| ||||||||||| ||| ||| |||| ||| ||| |||||    
T  20533158 tgcgcatgcctctacgtacgagtcggattaatcgctcatctttaatgtgtcagaaac 20533214  T

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Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 29422278 - 29422322
Alignment:
Q  45 cggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||||||||||| |||||||||||| ||||||| || ||||||||    
T  29422278 cggattagtcgtccacctttgatggatcggaaatcggtgcgaaag 29422322  T

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Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 34722719 - 34722787
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||| ||||||| | ||| |||||||||||  |||||||||||| || ||||||| ||||||||    
T  34722719 gtgcacatgtctctacgcacgagccggattagtcgcccacctttgatggatcagaaaccggtgcgaaag 34722787  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 37804958 - 37804890
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||| ||||| ||||||| |||| || |  |||| ||||||||||||||||| || ||||||    
T  37804958 gtgcgcatgccgctacgcatgagtcagatttgttgcccaccattgatgggtcggaaaccaatacgaaag 37804890  T

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Target: chr2; HSP #57
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 24179602 - 24179657
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggt 71  Q
    |||| |||| |||||||||||| ||||| |||||||||||| || ||||| |||||    
T  24179602 ggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgggt 24179657  T

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Target: chr2; HSP #58
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 35443925 - 35443870
Alignment:
Q  28 tgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatg 83  Q
    |||||||||| ||||| |||||||||||| ||   ||||||| |||||||||||||    
T  35443925 tgcctctacgcatgagccggattagtcgtccattattgatggatcggaaaccgatg 35443870  T

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Target: scaffold0002 (Bit Score: 45; Significance: 6e-17; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 6e-17
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 616 - 680
Alignment:
Q  25 gcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||| ||||||||    
T  616 gcatgcctctacgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 680  T

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Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 319459 - 319532
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||||| |||||| | |||||  ||||||||||| |||||||| |||| ||||||||| ||||||||    
T  319459 ggccagtgcgcatccctctatgcatgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaag 319532  T

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Target: scaffold0002; HSP #3
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 410807 - 410850
Alignment:
Q  36 cgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    ||||||||  ||||||||||| |||||||||||||| |||||||    
T  410807 cgtatgagctggattagtcgtccacctttgatgggttggaaacc 410850  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 42899 - 42830
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    ||||||||||||||||  ||||| |||||||||||  |||||||| |||||||||||||| |||||||||    
T  42899 gtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagt 42830  T

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Target: scaffold0209 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 12615 - 12683
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||| |  ||||||| ||||||||    
T  12615 gtgcgcatgcctctacgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaag 12683  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 8773 - 8700
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| |||||| |||||||||| |||||  ||||||||||| |||||||| |||||||||||| | ||||||||    
T  8773 ggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 8700  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 250097 - 250024
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||| ||||||||||| || |||||| ||||||||||| || ||||||||    
T  250097 ggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaag 250024  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 219406 - 219479
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| | ||   ||||||||||| |||||||||||| ||| |||||| ||| ||||    
T  219406 ggccagtgcgcatgcctctacgcacgaactggattagtcgtccacctttgatggatcgaaaaccggtgcaaaag 219479  T

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Target: scaffold0384 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 6009 - 6077
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgc 84  Q
    |||| |||| |||||||||||| ||||| || ||||||||| |||| ||| ||||||||||||||||||    
T  6009 ggccagtgcacatgcctctacgcatgagacgaattagtcgtccaccattggtgggtcggaaaccgatgc 6077  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 155778 - 155710
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| | ||| |||||||||||  |||||||| |||||||||| ||| ||||||||    
T  155778 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaag 155710  T

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Target: scaffold0170 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 9882 - 9945
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaacc 79  Q
    |||| ||||||||||||||||| | ||| |||||||||||| |||||||| |||||| ||||||    
T  9882 ggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcagaaacc 9945  T

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Target: scaffold0376 (Bit Score: 35; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 12707 - 12781
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||| ||||||||||||| | ||  |||||||||||  ||||||||||||||| ||||||| |||||||||    
T  12707 ggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttgatgggtcagaaaccggtgcgaaagt 12781  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 224359 - 224428
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaagt 90  Q
    |||| ||| |||||||| | ||| |||||||||||| || ||||| |||||||||||||| |||||||||    
T  224359 gtgcacatacctctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaagt 224428  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 186559 - 186618
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccg 80  Q
    |||| |||||||||||| | ||| ||||||||||||||| ||||  ||||||||||||||    
T  186559 gtgcacatgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccg 186618  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 68556 - 68621
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcga 86  Q
    ||||||||||||||||| | ||| |||||||||||  |||||||| ||||||| |||||| |||||    
T  68556 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

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Target: scaffold0316 (Bit Score: 33; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 1681 - 1613
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||||||||||||||| ||||| |  ||||||||  |||||||| ||||||| |||||| ||||||||    
T  1681 gtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 1613  T

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Target: scaffold0223 (Bit Score: 33; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 16921 - 16989
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    ||||| ||| ||||||| | ||| | ||||||||| ||||||||| ||||| |||||||||||||||||    
T  16921 gtgcgtatgtctctacgcacgagccagattagtcgctcacctttggtgggttggaaaccgatgcgaaag 16989  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 17432 - 17494
Alignment:
Q  21 gtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatg 83  Q
    |||||||||| |||||  | ||| |||||||||||  |||| |||||||||||||||||||||    
T  17432 gtgcgcatgcttctacacacgagccggattagtcgcccaccattgatgggtcggaaaccgatg 17494  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 26220 - 26293
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||| ||||||||||||| | ||| |||||||||||| |||  |||||| ||||||||||  ||||||||    
T  26220 ggccagtgtgcatgcctctacgcacgagccggattagtcgtccacaattgatgagtcggaaaccagtgcgaaag 26293  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 7907 - 7834
Alignment:
Q  16 ggcctgtgcgcatgcctctacgtatgagtcggattagtcgttcacctttgatgggtcggaaaccgatgcgaaag 89  Q
    |||| ||||||||||||||||| || ||  ||||||||||  |||||||| ||| |||||||||| | ||||||    
T  7907 ggccagtgcgcatgcctctacgcattagctggattagtcgcccacctttggtggatcggaaaccggtacgaaag 7834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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