View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4702-Insertion-3 (Length: 1044)
Name: NF4702-Insertion-3
Description: NF4702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4702-Insertion-3 |
 | |
|
| [»] chr5 (6 HSPs) |
| |
|
| [»] chr3 (5 HSPs) |
| |
|
| [»] chr8 (3 HSPs) |
| |
|
| [»] scaffold0005 (1 HSPs) |
| |
|
| [»] chr2 (3 HSPs) |
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| [»] chr6 (3 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 631; Significance: 0; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 631; E-Value: 0
Query Start/End: Original strand, 5 - 708
Target Start/End: Original strand, 51406297 - 51407002
Alignment:
| Q |
5 |
acatgtctatgatgagtagagtaaaaacctgcactctagcatcgtcgcccacatgctcatgaccaccacggacttcgacggacgggcatactaatcatct |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51406297 |
acatgtctatgatgagtagagtaaaaacctgcactctagcatcgtcgcccacatgctcatgaccaccacggacttcgacggacgggcatactaatcatct |
51406396 |
T |
|
| Q |
105 |
ggactgccctgccttgcaaacatgacttggacactcactgaagtaagaattgcggtacacctgctcttttgttaccttctccggccatatcctgttgaaa |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51406397 |
ggactgccctgccttgcaaacatgacttggacactcactgaagtaaga-tcgcggtacacctgctcttttgttaccttctccggccatatcctgttgaaa |
51406495 |
T |
|
| Q |
205 |
a-ttatgatgttgttgatgcacaccaacatctcatatttgtaagggattaaattgcggtatttaactgttccatgcgttctgctttcatggttctcattt |
303 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51406496 |
aattatgatgttgttgatgcacaccaacatctcatatttgtaagggattaaattgcggtatttaactgttccatgcgttctgctttcatggttctcattt |
51406595 |
T |
|
| Q |
304 |
ttggcctcccaattcgtgcacttagaaagaaatgaagttttttgtgtctaccactaaatgcagacactaatttcatgggtcgggtaggattttataggtg |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
51406596 |
ttggcctcccaattcgtgcacttagaaagaaatgaagttttttgtgtctaccactaaatgcagacactaatttcatgggtcgggtaggatcttataggtg |
51406695 |
T |
|
| Q |
404 |
g--nnnnnnnctaaatggtgcacaaaaattatgacatttttaaaattgtgcaactaaatttttccaaattaaaataggatactgtaattgtgaatctcaa |
501 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51406696 |
gaaaaaaaaactaaatggtgcacaaaaattatgacatttttaaaattgtgcaactaaatttttccaaattaaaataggatactgtaattgtgaatctcaa |
51406795 |
T |
|
| Q |
502 |
aaattattcaatataacaatatcaatattatcgtaaagcatctatctaacttcttcaccgccaaacacttgcccatttcccttttcatccaaattttgtc |
601 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
51406796 |
aaattattcaacataacaatatcaatattatcgtaaagcatctatctaacttcttcaccgccaaacacttacccatttcccttttcatccaaattttgtc |
51406895 |
T |
|
| Q |
602 |
gtcatcatgtagacatcagttggtggtggtgcgacggtcggctttagccatccgcaccatcctttccagatctcctagaggtttccgcgtcggtagactg |
701 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
51406896 |
gtcatcatgtagacatcagatggtggtggtgcgacggtcggctttagccatccgcaccatcctttccagatctcctggaggtttccgcgccggtagactg |
51406995 |
T |
|
| Q |
702 |
tggttgc |
708 |
Q |
| |
|
||||||| |
|
|
| T |
51406996 |
tggttgc |
51407002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 831 - 1044
Target Start/End: Original strand, 51407125 - 51407337
Alignment:
| Q |
831 |
aagtctcaattttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggt |
930 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
51407125 |
aagtctcgattttggtggtaagaggaggtgatgatggtagttttggtactgctagttgcagtggggctgttttctttcttgtgggtgctgagtttgcggt |
51407224 |
T |
|
| Q |
931 |
tgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtggtgtgaagtggtga |
1029 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
51407225 |
tgttagaaaaacacaggttgtctggtgttttagtgtggtggatgtttccttccgatccaaatc-tttgtggatg-aggtgatggtggtgtgaagtggtga |
51407322 |
T |
|
| Q |
1030 |
tgtaggccacatttt |
1044 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
51407323 |
tgtaggccacatttt |
51407337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 546 - 708
Target Start/End: Complemental strand, 50590519 - 50590357
Alignment:
| Q |
546 |
tctaacttcttcaccgccaaacacttgcccatttcccttttcatccaaattttgtcgtcatcatgtagacatcagttggtggtggtgcgacggtcggctt |
645 |
Q |
| |
|
||||| ||| ||||||||||||||| ||| | || |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
50590519 |
tctaatttcctcaccgccaaacactcacccctctctcttttcatccaatttttaccgtcatcatgtagacatcaggtggtggtggtgcgacggtcggctt |
50590420 |
T |
|
| Q |
646 |
tagccatccgcaccatcctttccagatctcctagaggtttccgcgtcggtagactgtggttgc |
708 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||| |
|
|
| T |
50590419 |
tagccatccgcaccacactttccagatctcccggaggttgtcgcgtcggtggactgtggttgc |
50590357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 542 - 633
Target Start/End: Complemental strand, 8817750 - 8817659
Alignment:
| Q |
542 |
tctatctaacttcttcaccgccaaacacttgcccatttcccttttcatccaaattttgtcgtcatcatgtagacatcagttggtggtggtgc |
633 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8817750 |
tctatctaacttcttcaccgccaaacacttacccatttcccttttcatccaaattttgtcgtcatcatgtagacatcagttggtggtggtgc |
8817659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 1044
Target Start/End: Complemental strand, 14792487 - 14792287
Alignment:
| Q |
842 |
ttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggttgttagaaaac |
941 |
Q |
| |
|
|||||||||| |||| |||||| |||| |||||||||||| |||| || | | | ||||||||| |||| || ||||||||||||| |||||||||| |
|
|
| T |
14792487 |
ttggtggtaagaggatgtgatggtggtggttttggtactg-tagccgcggcgatgatgttttcttccttgcgggtgctgagtttgcgactgttagaaaaa |
14792389 |
T |
|
| Q |
942 |
cacaggttgtctggtgttttagtgtg-tggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtggtgtgaagtggtgatgtaggccaca |
1040 |
Q |
| |
|
||||||||| |||||| || ||||| ||| |||||||||| |||||| |||| | ||||| || |||||||||||||||| ||||||||||||||||| |
|
|
| T |
14792388 |
cacaggttgcctggtgaattcgtgtggtggttgtttccttctgatccagatctat-gtggagga-ggtgatggtggtgtgaggtggtgatgtaggccacg |
14792291 |
T |
|
| Q |
1041 |
tttt |
1044 |
Q |
| |
|
|||| |
|
|
| T |
14792290 |
tttt |
14792287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 900 - 1044
Target Start/End: Complemental strand, 12888439 - 12888296
Alignment:
| Q |
900 |
ttttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtg-tgtggatgtttccttccgatccaaatcttttgt |
998 |
Q |
| |
|
||||||| |||| || |||||||||||||| |||||| ||| |||||||||||||||||||| ||| |||| |||||||||| |||||| ||| | ||| |
|
|
| T |
12888439 |
ttttcttccttgcgggtgctgagtttgcggctgttagtaaaacacaggttgtctggtgtttttgtgcggtggttgtttccttctgatccagatc-tatgt |
12888341 |
T |
|
| Q |
999 |
ggatgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
||| | ||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
12888340 |
gga-ggaggtgatggtggtgtgatgtggtgatgtaggtcacatttt |
12888296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 916 - 1044
Target Start/End: Complemental strand, 18357272 - 18357146
Alignment:
| Q |
916 |
tgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgtgtggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtg |
1015 |
Q |
| |
|
|||||||||||| | |||||| ||| ||||||||||||||||||| ||||| | | ||||||||||||||||||| | || ||| | || |||||||| |
|
|
| T |
18357272 |
tgctgagtttgcagctgttaggaaaatacaggttgtctggtgtttttgtgtgatggtttttccttccgatccaaatc-tatgcgga-ggagatgatggtg |
18357175 |
T |
|
| Q |
1016 |
gtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
|||||| |||||||||||||||||||||| |
|
|
| T |
18357174 |
gtgtgaggtggtgatgtaggccacatttt |
18357146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 916 - 1044
Target Start/End: Original strand, 18431535 - 18431661
Alignment:
| Q |
916 |
tgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgtgtggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtg |
1015 |
Q |
| |
|
|||||||||||| | |||||| ||| ||||||||||||||||||| ||||| | | ||||||||||||||||||| | || ||| | || |||||||| |
|
|
| T |
18431535 |
tgctgagtttgcagctgttaggaaaatacaggttgtctggtgtttttgtgtgatggtttttccttccgatccaaatc-tatgcgga-ggagatgatggtg |
18431632 |
T |
|
| Q |
1016 |
gtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
|||||| |||||||||||||||||||||| |
|
|
| T |
18431633 |
gtgtgaggtggtgatgtaggccacatttt |
18431661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1007 - 1044
Target Start/End: Complemental strand, 23533445 - 23533408
Alignment:
| Q |
1007 |
gtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
23533445 |
gtgatggtggtgtgaggtggtgatgtaggccacatttt |
23533408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 143; Significance: 1e-74; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 831 - 1044
Target Start/End: Complemental strand, 33758431 - 33758219
Alignment:
| Q |
831 |
aagtctcaattttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggt |
930 |
Q |
| |
|
||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||| |
|
|
| T |
33758431 |
aagtctcgactttggtggtaagaggaggtgatgatggtagttttggtactgttagctgcagtggtgctgttttctttcttgtgggtactgagtttgcggc |
33758332 |
T |
|
| Q |
931 |
tgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtggtgtgaagtggtga |
1029 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
33758331 |
cgttagaaaaacacaggttgtctggtgttttagtgtggtggatgtttccttccgatccagatc-tttgtggatg-aggtgatggtggtgtgaggtggtga |
33758234 |
T |
|
| Q |
1030 |
tgtaggccacatttt |
1044 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
33758233 |
tgtaggccacatttt |
33758219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 542 - 707
Target Start/End: Complemental strand, 33758714 - 33758549
Alignment:
| Q |
542 |
tctatctaacttcttcaccgccaaacacttgcccatttcccttttcatccaaattttgtcgtcatcatgtagacatcagttggtggtggtgcgacggtcg |
641 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33758714 |
tctatctaacttctttaccgccaaacacttacccatttcccttttcatccaaattttgccgtcatcatgtagacatcagttggtggtggtgcgacggtcg |
33758615 |
T |
|
| Q |
642 |
gctttagccatccgcaccatcctttccagatctcctagaggtttccgcgtcggtagactgtggttg |
707 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
33758614 |
gctttagccatccgcaccatcctttccagatctcccggaggtttccgcgccggtagactgtggttg |
33758549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 546 - 706
Target Start/End: Complemental strand, 9437328 - 9437168
Alignment:
| Q |
546 |
tctaacttcttcaccgccaaacacttgcccatttcccttttcatccaaattttgtcgtcatcatgtagacatcagttggtggtggtgcgacggtcggctt |
645 |
Q |
| |
|
||||||||| |||||||||||||||| | ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
9437328 |
tctaacttcctcaccgccaaacacttactgctttcccttttcattcaaattttgcaatcatcgtgtagacatcagttggtggtggtgtgacggtcggctt |
9437229 |
T |
|
| Q |
646 |
tagccatccgcaccatcctttccagatctcctagaggtttccgcgtcggtagactgtggtt |
706 |
Q |
| |
|
||||||||||||||| |||||| |||||||| ||||| | || ||||| |||||||||| |
|
|
| T |
9437228 |
tagccatccgcaccaccctttctagatctcccgaaggttgctgcatcggtggactgtggtt |
9437168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 900 - 1044
Target Start/End: Original strand, 27632083 - 27632226
Alignment:
| Q |
900 |
ttttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgt |
998 |
Q |
| |
|
|||||||||||| || |||||||||||||| |||||||||| |||| ||||| ||||||||| |||| |||| ||||||||||||||||| ||| | ||| |
|
|
| T |
27632083 |
ttttctttcttgcgggtgctgagtttgcggctgttagaaaagcacaagttgtttggtgtttttgtgtggtggttgtttccttccgatccagatc-tgtgt |
27632181 |
T |
|
| Q |
999 |
ggatgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
|| | ||||| ||||||| ||| ||||||||||||| ||| |||| |
|
|
| T |
27632182 |
aga-ggaggtgctggtggtatgaggtggtgatgtaggtcacgtttt |
27632226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 901 - 1044
Target Start/End: Complemental strand, 9436612 - 9436470
Alignment:
| Q |
901 |
tttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgtg |
999 |
Q |
| |
|
|||||| |||| || |||||||||||||| | |||||||| |||| ||| ||| ||||||| |||| ||| |||||||||||||||||| ||| | |||| |
|
|
| T |
9436612 |
tttcttccttgcgggtgctgagtttgcggctcttagaaaaacacatgttttctagtgtttttgtgtggtgtatgtttccttccgatccagatc-tatgtg |
9436514 |
T |
|
| Q |
1000 |
gatgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
|| | |||| |||| ||||||| ||||||||||| |||||||||| |
|
|
| T |
9436513 |
ga-ggaggtaatgggggtgtgaggtggtgatgtaagccacatttt |
9436470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 920 - 1044
Target Start/End: Original strand, 36607779 - 36607902
Alignment:
| Q |
920 |
gagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgtg-tggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtggtg |
1018 |
Q |
| |
|
||||||| || |||||||||| ||||||||||||| |||||| | || ||| ||||||||||| ||||| || || |||||| || | ||||||||||| |
|
|
| T |
36607779 |
gagtttgtggctgttagaaaaacacaggttgtctgatgtttttgcttggtggttgtttccttccaatccagat-ttatgtggagga-gttgatggtggtg |
36607876 |
T |
|
| Q |
1019 |
tgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
||| |||||||||||||||||||||| |
|
|
| T |
36607877 |
tgaggtggtgatgtaggccacatttt |
36607902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 103; Significance: 1e-50; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 546 - 676
Target Start/End: Original strand, 15118002 - 15118132
Alignment:
| Q |
546 |
tctaacttcttcaccgccaaacacttgcccatttcccttttcatccaaattttgtcgtcatcatgtagacatcagttggtggtggtgcgacggtcggctt |
645 |
Q |
| |
|
||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| || |
|
|
| T |
15118002 |
tctaacttcctcaccgccaaacacttacccctttcccttttcatccaaattttgtcgtcatcatgtagacatcacttggtggtggtgtgacggtcgggtt |
15118101 |
T |
|
| Q |
646 |
tagccatccgcaccatcctttccagatctcc |
676 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |
|
|
| T |
15118102 |
tagccatccgcaccaccctttccagatctcc |
15118132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 831 - 1044
Target Start/End: Complemental strand, 47589296 - 47589085
Alignment:
| Q |
831 |
aagtctcaattttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggt |
930 |
Q |
| |
|
||||||| |||||||||||| | ||||||||| |||| |||||||||||| ||| ||| | || ||||||||||| || |||| | |||||||||| |
|
|
| T |
47589296 |
aagtctcggttttggtggtaagaagaggtgatggtggtggttttggtactg-tagttgcggcggtgctgttttcttcctcgtgggtattgagtttgcgac |
47589198 |
T |
|
| Q |
931 |
tgttagaaaaccacaggttgtctggtgttttagtgtg-tggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtggtgtgaagtggtga |
1029 |
Q |
| |
|
| |||||||| |||||||||| ||||||||| ||||| |||| ||||||||| |||||| ||| | |||||||| | |||| ||||||||| ||||||| |
|
|
| T |
47589197 |
ttttagaaaaacacaggttgtttggtgtttttgtgtggtggacgtttccttctgatccaggtctat-gtggatga-gatgatagtggtgtgaggtggtga |
47589100 |
T |
|
| Q |
1030 |
tgtaggccacatttt |
1044 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
47589099 |
tgtaggccacatttt |
47589085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 840 - 1044
Target Start/End: Original strand, 15121310 - 15121512
Alignment:
| Q |
840 |
ttttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggttgttagaaa |
939 |
Q |
| |
|
|||||| ||||| |||||||| || |||| |||||| ||| | ||| ||| | || | || |||||| |||| || |||||||||||||| | ||||||| |
|
|
| T |
15121310 |
ttttggaggtaagaggaggtgttggtggtggttttgatacgg-tagttgcggcggtgttggtttcttccttgcgggtgctgagtttgcggctcttagaaa |
15121408 |
T |
|
| Q |
940 |
accacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtggtgtgaagtggtgatgtaggcca |
1038 |
Q |
| |
|
| || ||||||||||||| ||| |||| |||||||||||||||||||||| ||| | | |||| | || |||||| ||||||| |||||||||||||||| |
|
|
| T |
15121409 |
aacataggttgtctggtgcttttgtgtggtggatgtttccttccgatccagatc-tatatgga-ggagttgatgggggtgtgaggtggtgatgtaggcca |
15121506 |
T |
|
| Q |
1039 |
catttt |
1044 |
Q |
| |
|
|||||| |
|
|
| T |
15121507 |
catttt |
15121512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 900 - 1044
Target Start/End: Original strand, 5892811 - 5892952
Alignment:
| Q |
900 |
ttttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgtgtggatgtttccttccgatccaaatcttttgtg |
999 |
Q |
| |
|
||||||| |||| ||||||||||||||||| | |||||||| |||||||||||||||||||| ||||| | | |||||||||||| || ||| | |||| |
|
|
| T |
5892811 |
ttttcttccttgcggatgctgagtttgcggctattagaaaaacacaggttgtctggtgtttttgtgtggtggt-tttccttccgattcagatc-tatgtg |
5892908 |
T |
|
| Q |
1000 |
gatgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
|| | ||||||||||||||||| | |||||||| |||||| |||| |
|
|
| T |
5892909 |
ga-ggaggtgatggtggtgtgaggcggtgatgtcggccacgtttt |
5892952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 916 - 985
Target Start/End: Complemental strand, 36934410 - 36934340
Alignment:
| Q |
916 |
tgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgat |
985 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
36934410 |
tgctgagtttgcggctgttagaaaaacacagtttgtctggtgtttttgtgtggtggatgtttccttccgat |
36934340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 916 - 1030
Target Start/End: Complemental strand, 26199965 - 26199849
Alignment:
| Q |
916 |
tgctgagtttgcggttgttagaaaaccaca---ggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgtggatgaaggtgat |
1011 |
Q |
| |
|
|||||||||||||| |||||||||| |||| |||||||||||||||| |||| |||| ||||||||||||||||| ||| | ||| || ||||||||| |
|
|
| T |
26199965 |
tgctgagtttgcggctgttagaaaaacacagttggttgtctggtgtttttgtgtggtggttgtttccttccgatccagatc-tatgtaga-gaaggtgat |
26199868 |
T |
|
| Q |
1012 |
ggtggtgtgaagtggtgat |
1030 |
Q |
| |
|
||| |||||| |||||||| |
|
|
| T |
26199867 |
ggttgtgtgaggtggtgat |
26199849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 607 - 667
Target Start/End: Complemental strand, 10004400 - 10004340
Alignment:
| Q |
607 |
catgtagacatcagttggtggtggtgcgacggtcggctttagccatccgcaccatcctttc |
667 |
Q |
| |
|
|||||||||| |||||| ||||||||||||| ||||||||||||||| ||||| |||||| |
|
|
| T |
10004400 |
catgtagacaacagttgatggtggtgcgacgaacggctttagccatccacaccaccctttc |
10004340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 676
Target Start/End: Complemental strand, 10020390 - 10020292
Alignment:
| Q |
577 |
tttcccttttcatccaaattttgtcgtcatcatgtagacatcagttggtggtggtgcgacggtcggctttagccatccgcaccatcctttccagatctcc |
676 |
Q |
| |
|
||||| |||||||||| ||||| | ||| |||||||||| |||||||||||||||| | || | |||||||||| ||||| ||||||||||||||| |
|
|
| T |
10020390 |
tttccattttcatccagtttttgccttcaacatgtagacaacagttggtggtggtgc-aatgttgactttagccatttacaccaccctttccagatctcc |
10020292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 75; Significance: 5e-34; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 831 - 1044
Target Start/End: Original strand, 51056625 - 51056836
Alignment:
| Q |
831 |
aagtctcaattttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggt |
930 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||| |||| ||||||||| || ||||||| | | ||||||||| ||| | ||||||||||||||| |
|
|
| T |
51056625 |
aagtctcagttttggtggtaagaggaggtgatggtggtcgttttggtattg-tagctgcgacagtgttgttttcttccttacaggtgctgagtttgcggt |
51056723 |
T |
|
| Q |
931 |
tgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtggtgtgaagtggtga |
1029 |
Q |
| |
|
|||||||| | |||||||||||||||||||| || | |||| |||||||||| |||||| ||| | |||||| | ||||||||||||||||| |||| || |
|
|
| T |
51056724 |
tgttagaacaacacaggttgtctggtgtttttgtatggtggttgtttccttctgatccagatc-tatgtgga-ggaggtgatggtggtgtgaggtggcga |
51056821 |
T |
|
| Q |
1030 |
tgtaggccacatttt |
1044 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
51056822 |
tgtaggccacatttt |
51056836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 51056053 - 51056131
Alignment:
| Q |
596 |
tttgtcgtcatcatgtagacatcagttggtggtggtgcgacggtcggctttagccatccgcaccatcctttccagatct |
674 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
51056053 |
tttggcgtcatcatgtagacatcagttggtggtggtgcgacggtcggctttagccatccacaccaccctttccagatct |
51056131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 902 - 1044
Target Start/End: Complemental strand, 25499033 - 25498892
Alignment:
| Q |
902 |
ttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgtg-tggatgtttccttccgatccaaatcttttgtgg |
1000 |
Q |
| |
|
||||| |||| ||||| ||||||||||| |||||||||| |||| ||| |||||||||| | ||| ||| ||||||||||||||||| |||| | |||| |
|
|
| T |
25499033 |
ttcttccttgcggatgttgagtttgcggctgttagaaaaacacaagttatctggtgtttatgcgtggtggttgtttccttccgatccatatctat-gtgg |
25498935 |
T |
|
| Q |
1001 |
atgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
| || |||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
25498934 |
agga-ggtgatggtggtgtaaggtggtgatgtaggccacatttt |
25498892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1005 - 1044
Target Start/End: Original strand, 17113689 - 17113728
Alignment:
| Q |
1005 |
aggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
17113689 |
aggtgatggtggtgtgaggtggtgatgtaggccacgtttt |
17113728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 842 - 927
Target Start/End: Complemental strand, 38259034 - 38258950
Alignment:
| Q |
842 |
ttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgc |
927 |
Q |
| |
|
|||||||||| |||||||||| |||| ||||||||||| ||||||| |||| | ||||||||| |||| || | |||||||||| |
|
|
| T |
38259034 |
ttggtggtaagaggaggtgattgtggtggttttggtact-ttagctgcggtggtgttgttttcttccttgcgggtactgagtttgc |
38258950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 74; Significance: 2e-33; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 900 - 1044
Target Start/End: Complemental strand, 20519211 - 20519068
Alignment:
| Q |
900 |
ttttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgt |
998 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||| |||| |||| ||||||||||||||||| ||| | ||| |
|
|
| T |
20519211 |
ttttcttccttgtgggtgctgagtttgcggttgttagaaaaacacaagttgtctggagtttttgtgtggtggttgtttccttccgatccagatc-tatgt |
20519113 |
T |
|
| Q |
999 |
ggatgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
||| | ||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
20519112 |
gga-ggaggtgatggtggtgtgaggtggtgatgtagaccacatttt |
20519068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 903 - 1044
Target Start/End: Original strand, 38149387 - 38149527
Alignment:
| Q |
903 |
tctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgtgga |
1001 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||| |||| |||| ||||||||||||||||| ||| | | |||| |
|
|
| T |
38149387 |
tcttccttgtgggtgctgagtttgcggttgttggaaaaacacatgttgtctggtgtttttgtgtggtggttgtttccttccgatccagatc-tatatgga |
38149485 |
T |
|
| Q |
1002 |
tgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
38149486 |
-ggaggtgatggtggtgtgaagtggtgatgtacgccacatttt |
38149527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 909 - 1018
Target Start/End: Original strand, 32919392 - 32919501
Alignment:
| Q |
909 |
ttgtggatgctgagtttgcggttgttagaaaaccacaggt-tgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgtggatgaag |
1006 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| |||| || ||| ||||| ||| |||| |||| ||||||||||||||||| ||| | |||||| | || |
|
|
| T |
32919392 |
ttgtgggtgctgagtttgcggttgttggaaaaacacatgtgtgtttggtgcttttgtgtggtggttgtttccttccgatccagatc-tatgtgga-ggag |
32919489 |
T |
|
| Q |
1007 |
gtgatggtggtg |
1018 |
Q |
| |
|
|||||||||||| |
|
|
| T |
32919490 |
gtgatggtggtg |
32919501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 73; Significance: 8e-33; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 831 - 967
Target Start/End: Original strand, 36057646 - 36057781
Alignment:
| Q |
831 |
aagtctcaattttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggt |
930 |
Q |
| |
|
||||||| ||||||||||||| | ||||||||| |||| ||||||||| || ||||||| | || ||||||||||| |||||||||||||||||||||| |
|
|
| T |
36057646 |
aagtctcgattttggtggtaagatgaggtgatggtggttgttttggtattg-tagctgcggcggtgctgttttcttccttgtggatgctgagtttgcggc |
36057744 |
T |
|
| Q |
931 |
tgttagaaaaccacaggttgtctggtgttttagtgtg |
967 |
Q |
| |
|
|||||||||| |||| ||||||||||||||| ||||| |
|
|
| T |
36057745 |
tgttagaaaaacacaagttgtctggtgtttttgtgtg |
36057781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 831 - 967
Target Start/End: Original strand, 36058774 - 36058909
Alignment:
| Q |
831 |
aagtctcaattttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggt |
930 |
Q |
| |
|
||||||| ||||||||||||| | ||||||||| |||| ||||||||| || ||||||| | || ||||||||||| |||||||||||||||||||||| |
|
|
| T |
36058774 |
aagtctcgattttggtggtaagatgaggtgatggtggttgttttggtattg-tagctgcggcggtgctgttttcttccttgtggatgctgagtttgcggc |
36058872 |
T |
|
| Q |
931 |
tgttagaaaaccacaggttgtctggtgttttagtgtg |
967 |
Q |
| |
|
|||||||||| |||| ||||||||||||||| ||||| |
|
|
| T |
36058873 |
tgttagaaaaacacaagttgtctggtgtttttgtgtg |
36058909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 900 - 1044
Target Start/End: Original strand, 32946800 - 32946943
Alignment:
| Q |
900 |
ttttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgt |
998 |
Q |
| |
|
||||||| |||| || |||| ||||||| | |||||||||| |||||||||||||||||||| |||| |||| |||||||||| |||||||||| | ||| |
|
|
| T |
32946800 |
ttttcttccttgcgggtgctaagtttgcagctgttagaaaaacacaggttgtctggtgtttttgtgtggtggttgtttccttctgatccaaatc-tatgt |
32946898 |
T |
|
| Q |
999 |
ggatgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
||| | ||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
32946899 |
gga-ggaggtgatggtggtgtaaggtggtgatgtaggccacatttt |
32946943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 840 - 951
Target Start/End: Complemental strand, 27110011 - 27109901
Alignment:
| Q |
840 |
ttttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggttgttagaaa |
939 |
Q |
| |
|
|||||||||||| ||||||||||| |||| |||||| || || ||||||| | || ||| ||||||| ||||||| ||||||||||||| ||||||||| |
|
|
| T |
27110011 |
ttttggtggtaagaggaggtgatggtggtggttttgatattg-tagctgcggcggtgctattttcttccttgtggttgctgagtttgcgcctgttagaaa |
27109913 |
T |
|
| Q |
940 |
accacaggttgt |
951 |
Q |
| |
|
| |||||||||| |
|
|
| T |
27109912 |
aacacaggttgt |
27109901 |
T |
|
Back To:
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Target: scaffold0005 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 842 - 1044
Target Start/End: Original strand, 47244 - 47444
Alignment:
| Q |
842 |
ttggtggtaaaaggaggtgatgatggtagttttggtactgctagctgcagtggggctgttttctttcttgtggatgctgagtttgcggttgttagaaaac |
941 |
Q |
| |
|
|||||||||| |||| |||||| |||| |||||||||||| |||| || | | | ||||||||| |||| || ||||||||||||| |||||||||| |
|
|
| T |
47244 |
ttggtggtaagaggatgtgatggtggtggttttggtactg-tagccgcggcgatgatgttttcttccttgcgggtgctgagtttgcgactgttagaaaaa |
47342 |
T |
|
| Q |
942 |
cacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgtggatgaaggtgatggtggtgtgaagtggtgatgtaggccaca |
1040 |
Q |
| |
|
||||||||| |||||| || |||| |||| |||||||||| |||||| ||| | |||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
47343 |
cacaggttgcctggtgaattcgtgtggtggttgtttccttctgatccagatc-tatgtgga-ggaggtgatggtggtgtgaggtggtgatgtaggccacg |
47440 |
T |
|
| Q |
1041 |
tttt |
1044 |
Q |
| |
|
|||| |
|
|
| T |
47441 |
tttt |
47444 |
T |
|
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Target: chr2 (Bit Score: 59; Significance: 2e-24; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 903 - 1044
Target Start/End: Complemental strand, 36593095 - 36592955
Alignment:
| Q |
903 |
tctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgtgtggat-gtttccttccgatccaaatcttttgtgga |
1001 |
Q |
| |
|
|||| ||||||| || |||||||||||||||| ||||| |||| | ||||||||||||| ||||| ||| ||||||||| |||||| |||| | ||||| |
|
|
| T |
36593095 |
tcttccttgtgggtgttgagtttgcggttgttggaaaaacacatgctgtctggtgtttttgtgtggtgattgtttccttctgatccagatctat-gtgga |
36592997 |
T |
|
| Q |
1002 |
tgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
36592996 |
gga-ggtgatggtggtgtgaggtggtgatgtaggccacatttt |
36592955 |
T |
|
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Target: chr2; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 898 - 1044
Target Start/End: Complemental strand, 5051584 - 5051439
Alignment:
| Q |
898 |
tgttttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgtg-tggatgtttccttccgatccaaatctttt |
996 |
Q |
| |
|
||||||||| |||| | |||||||||||||| | |||||||| ||| |||||||||||||| ||||| ||| ||||||||||| ||||| |||| | |
|
|
| T |
5051584 |
tgttttcttccttgcgtgtgctgagtttgcggctcttagaaaaatacaaattgtctggtgtttttgtgtggtggttgtttccttccaatccagatctat- |
5051486 |
T |
|
| Q |
997 |
gtggatgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
||||| || |||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
5051485 |
gtggagga-ggtgatgggtgtgtgaggtggtgatgtaggccacatttt |
5051439 |
T |
|
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Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 577 - 660
Target Start/End: Original strand, 7694620 - 7694705
Alignment:
| Q |
577 |
tttcccttttcatccaaa--ttttgtcgtcatcatgtagacatcagttggtggtggtgcgacggtcggctttagccatccgcacca |
660 |
Q |
| |
|
|||||||||||||||||| ||||| | ||| ||||||| || || | ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
7694620 |
tttcccttttcatccaaagtttttgccttcaacatgtagccaacattaggtggtggtgcgacggtcgactttagccatccgcacca |
7694705 |
T |
|
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Target: chr6 (Bit Score: 58; Significance: 7e-24; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 900 - 1044
Target Start/End: Complemental strand, 22696740 - 22696597
Alignment:
| Q |
900 |
ttttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatcttttgt |
998 |
Q |
| |
|
||||||| |||| || |||||||||||||| |||||||||| |||||||| |||||||||| |||| |||| ||||||||||||||||| ||| | ||| |
|
|
| T |
22696740 |
ttttcttccttgcgggtgctgagtttgcggctgttagaaaaacacaggttatctggtgtttatgtgtggtggttgtttccttccgatccagatc-tatgt |
22696642 |
T |
|
| Q |
999 |
ggatgaaggtgatggtggtgtgaagtggtgatgtaggccacatttt |
1044 |
Q |
| |
|
||| | |||||||||||||| | ||||||||||||||||| |||| |
|
|
| T |
22696641 |
gga-ggaggtgatggtggtgcaaggtggtgatgtaggccacgtttt |
22696597 |
T |
|
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Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 900 - 993
Target Start/End: Original strand, 34502876 - 34502970
Alignment:
| Q |
900 |
ttttctttcttgtggatgctgagtttgcggttgttagaaaaccacaggttgtctggtgttttagtgt-gtggatgtttccttccgatccaaatct |
993 |
Q |
| |
|
||||||| |||| || ||||||||||||||||||||| ||| ||||||||||||| |||||| |||| || | ||||||||||| ||||| |||| |
|
|
| T |
34502876 |
ttttcttccttgcgggtgctgagtttgcggttgttagtaaaacacaggttgtctgttgtttttgtgtggtcgttgtttccttccaatccagatct |
34502970 |
T |
|
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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 577 - 666
Target Start/End: Complemental strand, 27752444 - 27752354
Alignment:
| Q |
577 |
tttcccttttcatccaaatttt-gtcgtcatcatgtagacatcagttggtggtggtgcgacggtcggctttagccatccgcaccatccttt |
666 |
Q |
| |
|
||||||||||||| |||||||| ||| ||| || |||||| |||||||| |||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
27752444 |
tttcccttttcattcaaatttttgtcttcaatatttagacaaaagttggtgttggtgcgatagtcggctttagccatctgcatcacccttt |
27752354 |
T |
|
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