View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4703-Insertion-15 (Length: 280)
Name: NF4703-Insertion-15
Description: NF4703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4703-Insertion-15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 280
Target Start/End: Original strand, 38710540 - 38710803
Alignment:
| Q |
8 |
cagttatcatcaactccaggagaaaataacataaagagnnnnnnnnatcactcttgactgtttttgtccataatctgccatttacaaccacgtacgtatg |
107 |
Q |
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| T |
38710540 |
cagttatcatcaactccaggagaaaataacataa-gagtttttt--atcactctcgactgtttttgtccataatctgccatttacaaccacgtacgtatg |
38710636 |
T |
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| Q |
108 |
cannnnnnnnnncttttcgaagaaagaatgattcttaatttcaacaatttaattatctgctttactaatatctagatgtataaacttttgttatagtgag |
207 |
Q |
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| T |
38710637 |
cattttttttt-cttttcgaagaaagaatgattcttaatttcaacaatt-----atctgctttactaatatctagatgtataaacttttgttatagtgag |
38710730 |
T |
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| Q |
208 |
aaggaagtagaagaggtcttcagccgctttggtactgtcgcaaaagttcatgtattttggggactcactgttg |
280 |
Q |
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| T |
38710731 |
aaggaagtagaagaggtcttaagccgctttggtactgtcgcaaaagttcatgtattttggggactcactgttg |
38710803 |
T |
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