View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4703_high_1 (Length: 713)

Name: NF4703_high_1
Description: NF4703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4703_high_1
NF4703_high_1
[»] chr3 (39 HSPs)
chr3 (17-596)||(14869396-14869972)
chr3 (644-697)||(14869222-14869275)
chr3 (18-57)||(14155111-14155150)
chr3 (19-58)||(23626256-23626295)
chr3 (18-57)||(26769921-26769960)
chr3 (18-57)||(31073690-31073729)
chr3 (19-57)||(3505002-3505040)
chr3 (14-56)||(43110721-43110763)
chr3 (17-63)||(52491567-52491613)
chr3 (17-58)||(20123877-20123918)
chr3 (17-57)||(3820494-3820534)
chr3 (19-55)||(14004601-14004637)
chr3 (17-57)||(19301179-19301219)
chr3 (17-57)||(38703319-38703359)
chr3 (17-57)||(54012358-54012398)
chr3 (17-57)||(54087747-54087787)
chr3 (17-56)||(8487934-8487973)
chr3 (19-54)||(12013746-12013781)
chr3 (14-57)||(12066229-12066272)
chr3 (18-57)||(28735778-28735817)
chr3 (18-57)||(31073993-31074031)
chr3 (19-58)||(37050017-37050056)
chr3 (18-56)||(7272831-7272869)
chr3 (16-57)||(13041697-13041739)
chr3 (16-57)||(13049774-13049816)
chr3 (19-57)||(26932543-26932580)
chr3 (16-57)||(1351483-1351524)
chr3 (17-54)||(2985829-2985866)
chr3 (16-57)||(11761082-11761123)
chr3 (16-57)||(13468360-13468400)
chr3 (16-57)||(17261025-17261066)
chr3 (19-56)||(25024876-25024912)
chr3 (16-57)||(35359658-35359698)
chr3 (16-57)||(35434088-35434129)
chr3 (19-56)||(35460646-35460683)
chr3 (16-57)||(39846596-39846637)
chr3 (17-58)||(44986758-44986799)
chr3 (16-57)||(45151625-45151666)
chr3 (16-57)||(54012604-54012645)
[»] chr8 (29 HSPs)
chr8 (175-397)||(30424775-30424996)
chr8 (16-57)||(25653704-25653745)
chr8 (18-57)||(4335000-4335039)
chr8 (18-57)||(8441918-8441957)
chr8 (18-57)||(13572540-13572579)
chr8 (18-57)||(38711958-38711997)
chr8 (19-57)||(34227327-34227365)
chr8 (17-57)||(38132078-38132118)
chr8 (17-57)||(38687350-38687390)
chr8 (18-57)||(2873449-2873488)
chr8 (18-57)||(2873783-2873822)
chr8 (14-57)||(4923506-4923549)
chr8 (18-57)||(10761425-10761464)
chr8 (14-57)||(19158181-19158224)
chr8 (18-57)||(23389357-23389396)
chr8 (18-57)||(30222105-30222144)
chr8 (19-57)||(9305410-9305448)
chr8 (19-57)||(12936167-12936205)
chr8 (18-57)||(17817845-17817886)
chr8 (19-57)||(24177722-24177759)
chr8 (19-57)||(24358966-24359004)
chr8 (19-57)||(36343146-36343184)
chr8 (17-57)||(3785721-3785762)
chr8 (19-67)||(12478563-12478612)
chr8 (16-57)||(21692621-21692662)
chr8 (16-57)||(26537971-26538012)
chr8 (18-55)||(35773150-35773187)
chr8 (16-57)||(41708828-41708869)
chr8 (17-54)||(43382754-43382791)
[»] chr6 (23 HSPs)
chr6 (16-57)||(26475763-26475804)
chr6 (282-324)||(8976053-8976095)
chr6 (18-57)||(10545831-10545870)
chr6 (19-57)||(8237995-8238033)
chr6 (19-57)||(13552608-13552646)
chr6 (19-56)||(20504429-20504466)
chr6 (17-57)||(2181317-2181357)
chr6 (17-57)||(24602430-24602470)
chr6 (282-321)||(8992211-8992250)
chr6 (282-321)||(9016658-9016697)
chr6 (17-56)||(15959610-15959649)
chr6 (19-54)||(20504135-20504170)
chr6 (18-57)||(22362955-22362994)
chr6 (18-52)||(3108516-3108550)
chr6 (19-57)||(10343499-10343536)
chr6 (16-57)||(10366622-10366664)
chr6 (18-56)||(18028904-18028942)
chr6 (18-55)||(10546197-10546234)
chr6 (17-57)||(11336654-11336695)
chr6 (16-57)||(13420189-13420230)
chr6 (19-56)||(14924965-14925002)
chr6 (16-57)||(18788909-18788950)
chr6 (16-57)||(28583547-28583588)
[»] chr7 (30 HSPs)
chr7 (279-327)||(5674457-5674505)
chr7 (279-327)||(5699509-5699557)
chr7 (18-57)||(11576570-11576609)
chr7 (18-57)||(20164441-20164480)
chr7 (18-57)||(21444201-21444240)
chr7 (18-57)||(25903500-25903539)
chr7 (19-57)||(3389608-3389646)
chr7 (19-57)||(24478024-24478062)
chr7 (16-57)||(19336043-19336084)
chr7 (18-57)||(442870-442909)
chr7 (18-56)||(17052246-17052285)
chr7 (18-57)||(22317218-22317256)
chr7 (18-57)||(24233628-24233667)
chr7 (18-57)||(31750720-31750759)
chr7 (14-57)||(32200092-32200135)
chr7 (18-57)||(35158183-35158222)
chr7 (18-57)||(41380722-41380761)
chr7 (16-57)||(1492760-1492802)
chr7 (19-56)||(2241192-2241230)
chr7 (19-57)||(2300822-2300860)
chr7 (15-57)||(2624405-2624447)
chr7 (19-57)||(12005264-12005302)
chr7 (18-56)||(15814152-15814190)
chr7 (18-56)||(29547616-29547654)
chr7 (19-57)||(32946286-32946324)
chr7 (17-57)||(1263961-1264002)
chr7 (18-62)||(3402138-3402183)
chr7 (17-57)||(43596316-43596357)
chr7 (17-62)||(44412549-44412594)
chr7 (19-56)||(49094282-49094319)
[»] scaffold0004 (1 HSPs)
scaffold0004 (18-57)||(212513-212552)
[»] chr5 (24 HSPs)
chr5 (18-57)||(21039865-21039904)
chr5 (22-57)||(25088888-25088923)
chr5 (22-57)||(25146857-25146892)
chr5 (18-57)||(25962802-25962841)
chr5 (18-57)||(29690962-29691001)
chr5 (18-57)||(31312789-31312828)
chr5 (19-57)||(4413927-4413965)
chr5 (19-57)||(12148245-12148283)
chr5 (17-57)||(24802028-24802067)
chr5 (16-59)||(4221982-4222025)
chr5 (19-57)||(11721265-11721304)
chr5 (18-57)||(17886039-17886078)
chr5 (17-56)||(36518724-36518763)
chr5 (18-53)||(41184946-41184981)
chr5 (19-53)||(8861542-8861576)
chr5 (19-57)||(11721603-11721641)
chr5 (19-57)||(20627959-20627996)
chr5 (19-57)||(31920060-31920098)
chr5 (19-57)||(37082293-37082331)
chr5 (22-56)||(37217542-37217576)
chr5 (17-54)||(2545002-2545039)
chr5 (17-58)||(10598318-10598359)
chr5 (19-56)||(30916816-30916853)
chr5 (16-57)||(31601749-31601790)
[»] chr4 (37 HSPs)
chr4 (18-57)||(19909343-19909382)
chr4 (19-57)||(29104159-29104197)
chr4 (19-57)||(31226518-31226556)
chr4 (16-57)||(13032887-13032928)
chr4 (17-57)||(7086083-7086123)
chr4 (17-57)||(15782262-15782302)
chr4 (17-57)||(22451933-22451973)
chr4 (18-57)||(22853962-22854002)
chr4 (17-57)||(28292053-28292093)
chr4 (17-57)||(34318405-34318445)
chr4 (19-55)||(49300739-49300775)
chr4 (17-57)||(52439339-52439379)
chr4 (18-57)||(6439185-6439224)
chr4 (18-57)||(7913448-7913487)
chr4 (18-57)||(25107764-25107803)
chr4 (18-57)||(27627000-27627039)
chr4 (19-57)||(2032750-2032788)
chr4 (19-57)||(3652271-3652309)
chr4 (19-57)||(12388086-12388123)
chr4 (16-57)||(13910623-13910665)
chr4 (19-57)||(14121580-14121618)
chr4 (19-57)||(17696401-17696438)
chr4 (19-57)||(18509983-18510021)
chr4 (16-57)||(20514655-20514697)
chr4 (17-71)||(26144144-26144198)
chr4 (18-56)||(49296336-49296374)
chr4 (19-57)||(51353452-51353490)
chr4 (16-57)||(16291422-16291463)
chr4 (19-56)||(17494569-17494606)
chr4 (17-54)||(24560728-24560765)
chr4 (16-57)||(27450112-27450153)
chr4 (16-57)||(30966865-30966906)
chr4 (17-58)||(31592528-31592569)
chr4 (16-57)||(35370404-35370445)
chr4 (16-57)||(36405869-36405910)
chr4 (18-58)||(50773288-50773329)
chr4 (16-57)||(51902046-51902087)
[»] chr2 (42 HSPs)
chr2 (18-57)||(31122293-31122332)
chr2 (18-57)||(36525610-36525649)
chr2 (18-67)||(10071466-10071516)
chr2 (19-57)||(19253399-19253437)
chr2 (17-55)||(36845473-36845511)
chr2 (19-57)||(38127763-38127801)
chr2 (16-57)||(39341266-39341307)
chr2 (16-57)||(39341371-39341412)
chr2 (16-56)||(5558223-5558263)
chr2 (17-57)||(8214343-8214383)
chr2 (17-57)||(14793252-14793292)
chr2 (17-57)||(17688170-17688210)
chr2 (17-57)||(22552505-22552545)
chr2 (17-57)||(31108600-31108640)
chr2 (18-57)||(39752196-39752236)
chr2 (17-57)||(41611577-41611617)
chr2 (17-57)||(45632543-45632583)
chr2 (18-57)||(874353-874392)
chr2 (18-57)||(9419501-9419540)
chr2 (18-57)||(11093977-11094016)
chr2 (17-56)||(17920092-17920131)
chr2 (18-57)||(22846013-22846052)
chr2 (18-57)||(29097085-29097124)
chr2 (18-57)||(36795156-36795194)
chr2 (19-57)||(758764-758802)
chr2 (19-56)||(776276-776314)
chr2 (19-57)||(19272662-19272700)
chr2 (27-57)||(29949496-29949526)
chr2 (19-57)||(31989350-31989388)
chr2 (19-57)||(41101029-41101067)
chr2 (16-57)||(2526352-2526393)
chr2 (17-57)||(2526675-2526716)
chr2 (16-57)||(8214575-8214616)
chr2 (17-57)||(11115507-11115548)
chr2 (17-57)||(14745856-14745897)
chr2 (16-57)||(14793471-14793512)
chr2 (16-57)||(18048817-18048857)
chr2 (16-57)||(24952071-24952112)
chr2 (16-57)||(29640763-29640804)
chr2 (17-54)||(36944007-36944044)
chr2 (16-57)||(38470975-38471016)
chr2 (16-57)||(43766497-43766538)
[»] chr1 (28 HSPs)
chr1 (18-57)||(26399192-26399231)
chr1 (16-62)||(972836-972882)
chr1 (18-55)||(5457083-5457120)
chr1 (17-54)||(26486537-26486574)
chr1 (16-57)||(35168024-35168065)
chr1 (17-54)||(47839978-47840015)
chr1 (17-57)||(1363256-1363296)
chr1 (18-57)||(16420912-16420952)
chr1 (17-57)||(17724283-17724323)
chr1 (17-57)||(24004767-24004807)
chr1 (18-57)||(26190730-26190770)
chr1 (18-57)||(30147065-30147105)
chr1 (18-56)||(13693348-13693387)
chr1 (18-57)||(20158985-20159023)
chr1 (14-57)||(31883453-31883496)
chr1 (19-57)||(10611793-10611831)
chr1 (19-57)||(16421219-16421256)
chr1 (19-57)||(21771059-21771097)
chr1 (19-57)||(21853560-21853598)
chr1 (18-56)||(22387146-22387184)
chr1 (18-56)||(27265704-27265742)
chr1 (18-56)||(27322532-27322570)
chr1 (16-57)||(12277188-12277229)
chr1 (16-57)||(35384472-35384513)
chr1 (16-57)||(39160548-39160589)
chr1 (17-57)||(46584077-46584118)
chr1 (16-57)||(51809756-51809797)
chr1 (16-57)||(52413121-52413162)
[»] scaffold0289 (1 HSPs)
scaffold0289 (19-57)||(6726-6764)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-57)||(63368-63406)
[»] scaffold0511 (1 HSPs)
scaffold0511 (16-57)||(5442-5483)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-55)||(332067-332104)
[»] scaffold0192 (1 HSPs)
scaffold0192 (14-62)||(14461-14509)
[»] scaffold0111 (1 HSPs)
scaffold0111 (17-57)||(29700-29740)
[»] scaffold0085 (1 HSPs)
scaffold0085 (21-57)||(25282-25318)
[»] scaffold0577 (1 HSPs)
scaffold0577 (19-57)||(1846-1885)
[»] scaffold0258 (1 HSPs)
scaffold0258 (18-57)||(18643-18682)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-54)||(306803-306838)
[»] scaffold1462 (1 HSPs)
scaffold1462 (18-60)||(415-456)
[»] scaffold0430 (1 HSPs)
scaffold0430 (19-57)||(12820-12858)
[»] scaffold0179 (1 HSPs)
scaffold0179 (18-56)||(2740-2778)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-54)||(263206-263243)


Alignment Details
Target: chr3 (Bit Score: 484; Significance: 0; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 17 - 596
Target Start/End: Complemental strand, 14869972 - 14869396
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaac--ccctataaaattgtagtaaatgtttttaaactatttttagtatatcaagatagtctcta 114  Q
    |||||||||||||||||||  |  |||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14869972 aaaaatgacctatattacatag--taaagcactattaacacccctgtaaaattgtagtaaatgtttttaaactatttttagtatatcaagatagtctcta 14869875  T
Q  115 gattatcattctctttcttatttctaaaggaaatgaaaaactaatttgattgatcaacaataaaaatttaaaggttttatttagaatatttatatagttg 214  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  14869874 gattatcattctctgtcttatttctaaaggaaatgaaaaactaatttgattgatcaacaataaaaatttaaaggtt--atttagaatatttatatagttg 14869777  T
Q  215 aaggactaaatttttaaatgagtgatagtttaagaaccaaaataatagtttattctaataatatgtgtacctgatccataggtgagggtgaagagagcaa 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14869776 aaggactaaatttttaaatgagtgatagtttaagaaccaaaataatagtttattctaataatatgtgtacctgatccataggtgagggtgaagagagcaa 14869677  T
Q  315 acaaagctcccactgttagcataatgtttccgagtttcatgatgatatttgctcaaacacgcaaaataatttcaaatagaattgaaaatattaagacaat 414  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  14869676 acaaagctcccactgttagtataatgtttccgagcttcatgatgatatttgctcaaacacacaaaataatttcaaatagaattgaaaatgttaagacaat 14869577  T
Q  415 gtcaaaatcagagaatcaaacatatggataatgattttcactcaatattaccttagctgaannnnnnnatacattaacgttgctgcaattcatctttcat 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  14869576 gtcaaaatcagagaatcaaacatatggataatgattttcactcaatattaccttagctgaatttttttatacattaacgttgctgcaattcatctttcat 14869477  T
Q  515 ttcagtgttactatttatttgattttttacaataggttgatatgagtatcaaagacattgattgtcaatgattttctttgac 596  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14869476 ttcagtgttactatttatttgattttttacaata-gttgatatgagtatcaaagacattgattgtcaatgattttctttgac 14869396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 644 - 697
Target Start/End: Complemental strand, 14869275 - 14869222
Alignment:
Q  644 caattagacttcattcaaaacttattttaaatttttactattttaatctgtgct 697  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14869275 caattagacttcattcaaaacttattttaaatttttactattttaatctgtgct 14869222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 14155111 - 14155150
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  14155111 aaaatgacctatattacacggggtaaaacactattaaccc 14155150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 23626256 - 23626295
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaacccc 58  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  23626256 aaatgacctatattacagggggtaaaacactattaacccc 23626295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 26769960 - 26769921
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  26769960 aaaatgacctatattacagggggtaaaacactattaaccc 26769921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 31073729 - 31073690
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  31073729 aaaatgacctatattacatggggtaaaacactattaaccc 31073690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 3505040 - 3505002
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  3505040 aaatggcctatattacaaggggtaaaacactattaaccc 3505002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 43110721 - 43110763
Alignment:
Q  14 atcaaaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    
T  43110721 atcaaaaatgacctatattacaggggataaaacactattaacc 43110763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 52491613 - 52491567
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacccctataa 63  Q
    ||||||||||||||||||| |||||||||||| |||||||| |||||    
T  52491613 aaaaatgacctatattacatggggtaaaacaccattaacccttataa 52491567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 20123877 - 20123918
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacccc 58  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  20123877 aaaaatgacctatattacagggggtaaaacaccattaacccc 20123918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 3820534 - 3820494
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  3820534 aaaaatgacctatattacagggggtaaaacaccattaaccc 3820494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 14004601 - 14004637
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaac 55  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14004601 aaatgacctatattacagggggtaaaacactattaac 14004637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 19301219 - 19301179
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  19301219 aaaaatgacctatattacagggggtaaaacaccattaaccc 19301179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 38703319 - 38703359
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  38703319 aaaaatgacatatattacagggggtaaaacactattaaccc 38703359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 54012398 - 54012358
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  54012398 aaaaatgacctatattacatggggtaaaacaccattaaccc 54012358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 54087747 - 54087787
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  54087747 aaaaatgacctatattacagggggtaaaacaccattaaccc 54087787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 8487934 - 8487973
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  8487934 aaaaatgacctatattacagggggtaaaacaccattaacc 8487973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 12013746 - 12013781
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaa 54  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12013746 aaatgacctttattacaaggggtaaaacactattaa 12013781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 12066272 - 12066229
Alignment:
Q  14 atcaaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||    
T  12066272 atcaaaagtgacctatattacagggggtaaaaaactattaaccc 12066229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 28735778 - 28735817
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  28735778 aaaatgacctatattataagaggtaaaacactattaaccc 28735817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 31073993 - 31074031
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  31073993 aaaatgacctatattaca-ggggtaaaacactattaaccc 31074031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 37050056 - 37050017
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaacccc 58  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  37050056 aaatgacttatattacatggggtaaaacactattaacccc 37050017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 7272831 - 7272869
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  7272831 aaaatgacctatattacagggggtaaagcactattaacc 7272869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 13041697 - 13041739
Alignment:
Q  16 caaaaatgacctatattaca-aggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  13041697 caaaaatgacctatattacaggggggtaaaacactattaaccc 13041739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 13049774 - 13049816
Alignment:
Q  16 caaaaatgacctatattaca-aggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  13049774 caaaaatgacctatattacaggggggtaaaacactattaaccc 13049816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 26932543 - 26932580
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  26932543 aaatgacctatattacaa-gggtaaaacactattaaccc 26932580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 1351483 - 1351524
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  1351483 caaaaatgacctatattacagggggtaaagcaccattaaccc 1351524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 2985829 - 2985866
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaa 54  Q
    |||||||||||||||||||  |||||||||||||||||    
T  2985829 aaaaatgacctatattacagagggtaaaacactattaa 2985866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 11761123 - 11761082
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  11761123 caaaaatgacctatattacagggggtaaagcaccattaaccc 11761082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 13468360 - 13468400
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  13468360 caaaaatgacctatattac-aggggtaaaacaccattaaccc 13468400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 17261066 - 17261025
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  17261066 caaaaatgacctatattacagggggtaaagcaccattaaccc 17261025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 25024876 - 25024912
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25024876 aaatgacctatattacaa-gggtaaaacactattaacc 25024912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 35359658 - 35359698
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  35359658 caaaaatgacctatattac-aggggtaaaacaccattaaccc 35359698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 35434088 - 35434129
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  35434088 caaaaatgacctatattacagggggtaaagcaccattaaccc 35434129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 35460683 - 35460646
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaacc 56  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  35460683 aaatgacctatattacagggggtaaaacaccattaacc 35460646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 39846596 - 39846637
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  39846596 caaaaatgacctatattacagggggtaaagcaccattaaccc 39846637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 44986758 - 44986799
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacccc 58  Q
    ||||||||||||||||||| ||| |||||||| |||||||||    
T  44986758 aaaaatgacctatattacaggggataaaacaccattaacccc 44986799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 45151666 - 45151625
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| |||| |||||||    
T  45151666 caaaaatgacctatattacagggggtaaagcactgttaaccc 45151625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 54012604 - 54012645
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  54012604 caaaaatgacctatattacagggggtaaagcaccattaaccc 54012645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 1e-73; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 175 - 397
Target Start/End: Original strand, 30424775 - 30424996
Alignment:
Q  175 taaaaatttaaaggttttatttagaatatttatatagttgaaggactaaatttttaaatgagtgatagtttaagaaccaaaataatagtttattctaata 274  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||| || |||||||||||| |||| ||| ||||||||||||||    
T  30424775 taaaaatttaaaggtt--atttacaatatttatatagttgaaggattaaatttttaaatgtgttatagtttaagaatcaaattaaaagtttattctaata 30424872  T
Q  275 atatgtgtacctgatccataggtgagggtgaagagagcaaacaaagctcccactgttagcataatgtttccga-gtttcatgatgatatttgctcaaaca 373  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |||| |||||| |||||| | ||||||||||||||||||||||||    
T  30424873 atatgtgtaccagatccataggtgaaggtgaagagagcaaacaaaactcccactattagaataatgcttccgaggcttcatgatgatatttgctcaaaca 30424972  T
Q  374 cgcaaaataatttcaaatagaatt 397  Q
    || | |||||||||||||||||||    
T  30424973 cgtacaataatttcaaatagaatt 30424996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 25653745 - 25653704
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  25653745 caaaaatgacctatattacagggggtaaaacactattaaccc 25653704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 4335000 - 4335039
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  4335000 aaaatgacctatattacagggggtaaaacactattaaccc 4335039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 8441957 - 8441918
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  8441957 aaaatgacctatattacatggggtaaaacactattaaccc 8441918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 13572579 - 13572540
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  13572579 aaaatgacctatattacagggggtaaaacactattaaccc 13572540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 38711958 - 38711997
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  38711958 aaaatgacctatattacagggggtaaaacactattaaccc 38711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 34227365 - 34227327
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  34227365 aaatgacctatattacagggggtaaaacactattaaccc 34227327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 38132078 - 38132118
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  38132078 aaaaatgacctatattacagggggtaaaacaccattaaccc 38132118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 38687390 - 38687350
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  38687390 aaaaatgacgtatattacaaggggtaaagcactattaaccc 38687350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 2873488 - 2873449
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  2873488 aaaatgacctatattacagggggtaaaacattattaaccc 2873449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 2873783 - 2873822
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  2873783 aaaatgacttatattacagggggtaaaacactattaaccc 2873822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 4923506 - 4923549
Alignment:
Q  14 atcaaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||    
T  4923506 atcaaaaatgacctatattacaaggagtaaagcaccattaaccc 4923549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 10761464 - 10761425
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  10761464 aaaatgacctatattacaaggggtgaaacaatattaaccc 10761425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 19158181 - 19158224
Alignment:
Q  14 atcaaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||    
T  19158181 atcaaaaatgacctatattacagggggtaaagcaccattaaccc 19158224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 23389357 - 23389396
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  23389357 aaaatgacctatattacagtgggtaaaacactattaaccc 23389396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 30222105 - 30222144
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  30222105 aaaatgacctatattacagggggtaaagcactattaaccc 30222144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 9305448 - 9305410
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  9305448 aaatgacccatattacagggggtaaaacactattaaccc 9305410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 12936205 - 12936167
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  12936205 aaatgacctatattacaggaggtaaaacactattaaccc 12936167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 17817886 - 17817845
Alignment:
Q  18 aaaatgacctatattacaag--gggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  17817886 aaaatgacctatattacaaggagggtaaaacactattaaccc 17817845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 24177759 - 24177722
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  24177759 aaatgacctatattaca-ggggtaaaacactattaaccc 24177722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 24359004 - 24358966
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  24359004 aaatgacctatattgcaaggggtaaaacattattaaccc 24358966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 36343184 - 36343146
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  36343184 aaatgatctatattacagggggtaaaacactattaaccc 36343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 3785721 - 3785762
Alignment:
Q  17 aaaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  3785721 aaaaatgacctatattacaatggggtaaaacaccattaaccc 3785762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 12478612 - 12478563
Alignment:
Q  19 aaatgacctatattacaagggg-taaaacactattaacccctataaaatt 67  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||| |||||    
T  12478612 aaatgacctatattacaggggggtaaaacactattaacccttatcaaatt 12478563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 21692621 - 21692662
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  21692621 caaaaatgacctatattacagggggtaaagcaccattaaccc 21692662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 26538012 - 26537971
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||| |||||||||||||||||| ||| ||||||||    
T  26538012 caaaaatgacatatattacaaggggtaaagcaccattaaccc 26537971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 35773187 - 35773150
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaac 55  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  35773187 aaaatgacctatattacagagggtaaaacactattaac 35773150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 41708869 - 41708828
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  41708869 caaaaatgacctatattacagggggtaaagcaccattaaccc 41708828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 43382791 - 43382754
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaa 54  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  43382791 aaaaatgacctatattacagggggtaaaacaccattaa 43382754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 26475804 - 26475763
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26475804 caaaaatgacctatattacaaggggtaaaacactattaaccc 26475763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 8976053 - 8976095
Alignment:
Q  282 tacctgatccataggtgagggtgaagagagcaaacaaagctcc 324  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  8976053 taccagatccataggtgagggtgaagagagcaaacaaagctcc 8976095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 10545870 - 10545831
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10545870 aaaatgacctatattacagggggtaaaacactattaaccc 10545831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 8237995 - 8238033
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  8237995 aaatgacctatattacagggggtaaaacactattaaccc 8238033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 13552646 - 13552608
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13552646 aaatgacctatattacaaagggtaaaacactattaaccc 13552608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 20504429 - 20504466
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaacc 56  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  20504429 aaatgacctatattacatggggtaaaacactattaacc 20504466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 2181357 - 2181317
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  2181357 aaaaatgacctatattacagggggtaaaacaccattaaccc 2181317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 24602470 - 24602430
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  24602470 aaaaatgacctatattacaaggggtaaagcaccattaaccc 24602430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 8992211 - 8992250
Alignment:
Q  282 tacctgatccataggtgagggtgaagagagcaaacaaagc 321  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  8992211 taccagatccataggtgagtgtgaagagagcaaacaaagc 8992250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 9016658 - 9016697
Alignment:
Q  282 tacctgatccataggtgagggtgaagagagcaaacaaagc 321  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  9016658 taccagatccataggtgagtgtgaagagagcaaacaaagc 9016697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 15959610 - 15959649
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  15959610 aaaaatgacctatattacagggggtaaaacaccattaacc 15959649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 20504170 - 20504135
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaa 54  Q
    ||||||||||||||||| ||||||||||||||||||    
T  20504170 aaatgacctatattacagggggtaaaacactattaa 20504135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 22362955 - 22362994
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  22362955 aaaatgacctatattacagggggtaaagcactattaaccc 22362994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 3108550 - 3108516
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactatt 52  Q
    |||||||| ||||||||||||||||||||||||||    
T  3108550 aaaatgacatatattacaaggggtaaaacactatt 3108516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 10343536 - 10343499
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  10343536 aaatgacctatattaca-ggggtaaaacactattaaccc 10343499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 10366622 - 10366664
Alignment:
Q  16 caaaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||| |||||||||||| ||||||||    
T  10366622 caaaaatgacctatattacaagggggtaaaacacaattaaccc 10366664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 18028904 - 18028942
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  18028904 aaaatgacctatattataagggataaaacactattaacc 18028942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 10546197 - 10546234
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaac 55  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  10546197 aaaatgacctatattacagagggtaaaacactattaac 10546234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 11336695 - 11336654
Alignment:
Q  17 aaaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  11336695 aaaaatgacctatattacaagggggtaaaacaccattaaccc 11336654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 13420230 - 13420189
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||| ||||||||| |||||||||||| ||||||||    
T  13420230 caaaaatgacttatattacagggggtaaaacaccattaaccc 13420189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 14925002 - 14924965
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaacc 56  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  14925002 aaatgacctatattacagggggtaaaacaccattaacc 14924965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 18788909 - 18788950
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||    
T  18788909 caaaaatgacctatattacaaagggtaaagcaccattaaccc 18788950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 28583588 - 28583547
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||| || ||||||||||| |||||||||||||||||||||    
T  28583588 caaaagtgccctatattacacggggtaaaacactattaaccc 28583547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 5674505 - 5674457
Alignment:
Q  279 gtgtacctgatccataggtgagggtgaagagagcaaacaaagctcccac 327  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  5674505 gtgtacctgatccataggtgatggtgaagagagaaaacaaagcacccac 5674457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 5699557 - 5699509
Alignment:
Q  279 gtgtacctgatccataggtgagggtgaagagagcaaacaaagctcccac 327  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  5699557 gtgtacctgatccataggtgatggtgaagagagaaaacaaagcacccac 5699509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 11576609 - 11576570
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  11576609 aaaatgacctatattacaaggggtaaaacactgttaaccc 11576570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 20164441 - 20164480
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20164441 aaaatgacctatattacagggggtaaaacactattaaccc 20164480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 21444201 - 21444240
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21444201 aaaatgacctatattacagggggtaaaacactattaaccc 21444240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 25903539 - 25903500
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  25903539 aaaatgacctatataacaaggggtaaaacactattaaccc 25903500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 3389646 - 3389608
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  3389646 aaatgacctatattacaagtggtaaaacactattaaccc 3389608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 24478062 - 24478024
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  24478062 aaatgacctatattacagggggtaaaacactattaaccc 24478024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 19336084 - 19336043
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  19336084 caaaaatgacctatattacagggggtaaaacaccattaaccc 19336043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 442870 - 442909
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  442870 aaaatggcctatattacagggggtaaaacactattaaccc 442909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 17052246 - 17052285
Alignment:
Q  18 aaaatgacctatattacaagg-ggtaaaacactattaacc 56  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  17052246 aaaatgacctatattacaaggaggtaaaacactattaacc 17052285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 22317256 - 22317218
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22317256 aaaatgacctatattacaa-gggtaaaacactattaaccc 22317218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 24233628 - 24233667
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  24233628 aaaatgacctatattatagggggtaaaacactattaaccc 24233667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 31750759 - 31750720
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  31750759 aaaatgatctatattacaaagggtaaaacactattaaccc 31750720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 32200092 - 32200135
Alignment:
Q  14 atcaaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||    
T  32200092 atcagaaatgacctatattacagggggtaaaacactgttaaccc 32200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 35158222 - 35158183
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  35158222 aaaatgacctatattacaggggataaaacactattaaccc 35158183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 41380722 - 41380761
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  41380722 aaaacgacctatattacagggggtaaaacactattaaccc 41380761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 1492802 - 1492760
Alignment:
Q  16 caaaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  1492802 caaaaatgacctatattacaagggggtaaagcactattaaccc 1492760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 2241192 - 2241230
Alignment:
Q  19 aaatgacctatattacaa-ggggtaaaacactattaacc 56  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2241192 aaatgacctatattacaagggggtaaaacactattaacc 2241230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 2300860 - 2300822
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  2300860 aaatgacctatattacagggggtagaacactattaaccc 2300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 2624447 - 2624405
Alignment:
Q  15 tcaaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||  |||||||| |||||||||||    
T  2624447 tcaaaaatgacctatattacagagggtaaaagactattaaccc 2624405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 12005302 - 12005264
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  12005302 aaatggcctatattacagggggtaaaacactattaaccc 12005264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 15814152 - 15814190
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  15814152 aaaatgacctatattacagggggtaaaacaatattaacc 15814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 29547616 - 29547654
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  29547616 aaaatgacttatattacaaggggtaaaacactaataacc 29547654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 32946324 - 32946286
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  32946324 aaatgacctatattacagggggtaaaatactattaaccc 32946286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 1263961 - 1264002
Alignment:
Q  17 aaaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  1263961 aaaaatgacctatattacaagggggtaaaacaccattaaccc 1264002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 3402138 - 3402183
Alignment:
Q  18 aaaatgacctatattaca-aggggtaaaacactattaacccctata 62  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||    
T  3402138 aaaatgacctatattacagaggggtaaagcactattaacccttata 3402183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 43596357 - 43596316
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaa-cactattaaccc 57  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  43596357 aaaaatgacctatattacagggggtaaaagcactattaaccc 43596316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 44412549 - 44412594
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacccctata 62  Q
    ||||||||||||||||||| |||||||| ||| |||||||| ||||    
T  44412549 aaaaatgacctatattacagggggtaaagcaccattaacccttata 44412594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 49094282 - 49094319
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaacc 56  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  49094282 aaatgacctatattacagggggtaaatcactattaacc 49094319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 212552 - 212513
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  212552 aaaatgacctatattacagggggtaaaacactattaaccc 212513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000007; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 21039904 - 21039865
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21039904 aaaatgacctatattacagggggtaaaacactattaaccc 21039865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 25088888 - 25088923
Alignment:
Q  22 tgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||||||||||||||||||    
T  25088888 tgacctatattacaaggggtaaaacactattaaccc 25088923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 25146857 - 25146892
Alignment:
Q  22 tgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||||||||||||||||||    
T  25146857 tgacctatattacaaggggtaaaacactattaaccc 25146892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 25962841 - 25962802
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25962841 aaaatgacctatattacagggggtaaaacactattaaccc 25962802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 29691001 - 29690962
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  29691001 aaaatgacctatattacaaggggtgaaacactattaaccc 29690962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 31312789 - 31312828
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  31312789 aaaatgacctatattacagggggtaaaacactattaaccc 31312828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 4413965 - 4413927
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  4413965 aaatgacctatattacagggggtaaaacactattaaccc 4413927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 12148245 - 12148283
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12148245 aaatgacctatattacagggggtaaaacactattaaccc 12148283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 24802028 - 24802067
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  24802028 aaaaatgacctatattaca-ggggtaaaacactattaaccc 24802067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 4221982 - 4222025
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaacccct 59  Q
    |||||||||||||||||||| ||||||||| || ||||||||||    
T  4221982 caaaaatgacctatattacagggggtaaaataccattaacccct 4222025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 11721304 - 11721265
Alignment:
Q  19 aaatgacctatattaca-aggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  11721304 aaatgacctatattacagaggggtaaaacactattaaccc 11721265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 17886039 - 17886078
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  17886039 aaaatgacctatattacagggggtaaaatactattaaccc 17886078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 36518763 - 36518724
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  36518763 aaaaatgacctatattacacggggtaaaacaccattaacc 36518724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 41184981 - 41184946
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactatta 53  Q
    |||||||||||||||||| |||||||||||||||||    
T  41184981 aaaatgacctatattacatggggtaaaacactatta 41184946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 8861542 - 8861576
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactatta 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  8861542 aaatgacctatattacagggggtaaaacactatta 8861576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 11721603 - 11721641
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  11721603 aaatgacttatattacaaggggtaaaagactattaaccc 11721641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 20627996 - 20627959
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  20627996 aaatgacctatattaca-ggggtaaaacactattaaccc 20627959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 31920098 - 31920060
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  31920098 aaataacctatattacagggggtaaaacactattaaccc 31920060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 37082293 - 37082331
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  37082293 aaattacctatattacagggggtaaaacactattaaccc 37082331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 37217542 - 37217576
Alignment:
Q  22 tgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||| ||||||||||||||||||||    
T  37217542 tgacctatattacagggggtaaaacactattaacc 37217576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 2545039 - 2545002
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaa 54  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  2545039 aaaaatgacctatattacaaagggtaaaacaccattaa 2545002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 10598359 - 10598318
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacccc 58  Q
    ||||||||||||||||||| |||||||| ||| |||||||||    
T  10598359 aaaaatgacctatattacagggggtaaagcaccattaacccc 10598318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 30916816 - 30916853
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||||||  |||||||||||||||||||    
T  30916816 aaatgacctatattacagagggtaaaacactattaacc 30916853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 31601790 - 31601749
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||| ||||||||| |||||||||||| ||||||||    
T  31601790 caaaaatgacatatattacagggggtaaaacaccattaaccc 31601749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000007; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 19909343 - 19909382
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  19909343 aaaatgacctatattacagggggtaaaacactattaaccc 19909382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 29104197 - 29104159
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  29104197 aaatgacctatattacagggggtaaaacactattaaccc 29104159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 31226518 - 31226556
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  31226518 aaatgacctatattacagggggtaaaacactattaaccc 31226556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 13032928 - 13032887
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  13032928 caaaaatgacctatattacagggggtaaaacaccattaaccc 13032887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 7086083 - 7086123
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  7086083 aaaaatgacctatattacagggggtaaaacaccattaaccc 7086123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 15782302 - 15782262
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  15782302 aaaaatgacctatattacaaggggtaaagcaccattaaccc 15782262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 22451973 - 22451933
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  22451973 aaaaatgacctatattacagggggtaaaacaccattaaccc 22451933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 22854002 - 22853962
Alignment:
Q  18 aaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  22854002 aaaatgacctatattacaagggggtaaaacactattaaccc 22853962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 28292093 - 28292053
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  28292093 aaaaatgacctatattacagggggtaaaacaccattaaccc 28292053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 34318445 - 34318405
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  34318445 aaaaatgacctatattacagggggtaaaacaccattaaccc 34318405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 49300775 - 49300739
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaac 55  Q
    ||||||||||||||||| |||||||||||||||||||    
T  49300775 aaatgacctatattacagggggtaaaacactattaac 49300739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 52439379 - 52439339
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  52439379 aaaaatgacctatattacagggggtaaaacaccattaaccc 52439339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 6439224 - 6439185
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  6439224 aaaatgacctatattacagggggtaaagcactattaaccc 6439185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 7913448 - 7913487
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  7913448 aaaatgacatatattacagggggtaaaacactattaaccc 7913487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 25107803 - 25107764
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  25107803 aaaatgacttatattacaaagggtaaaacactattaaccc 25107764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 27627000 - 27627039
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  27627000 aaaacgacctatattacagggggtaaaacactattaaccc 27627039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 2032750 - 2032788
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  2032750 aaatgacctatattacagggggtaaaatactattaaccc 2032788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 3652309 - 3652271
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  3652309 aaatgacctaaattacagggggtaaaacactattaaccc 3652271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 12388123 - 12388086
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12388123 aaatgacctatattaca-ggggtaaaacactattaaccc 12388086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 13910665 - 13910623
Alignment:
Q  16 caaaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||| |||||||||||| ||||||||    
T  13910665 caaaaatgacctatattacaagggggtaaaacaccattaaccc 13910623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 14121580 - 14121618
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  14121580 aaattacctatattacagggggtaaaacactattaaccc 14121618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 17696401 - 17696438
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  17696401 aaatgacctatattaca-ggggtaaaacactattaaccc 17696438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 18510021 - 18509983
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  18510021 aaatgacctatattacaggggataaaacactattaaccc 18509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 20514697 - 20514655
Alignment:
Q  16 caaaaatgacctatattaca-aggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| ||||||||||||| ||||||||    
T  20514697 caaaaatgacctatattacagaggggtaaaacaccattaaccc 20514655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 26144198 - 26144144
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacccctataaaattgtag 71  Q
    ||||||||||||||||||| |||||||| ||| |||||||| || ||||| ||||    
T  26144198 aaaaatgacctatattacagggggtaaagcaccattaacccttaaaaaatcgtag 26144144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 49296336 - 49296374
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  49296336 aaaatgacttatattacacggggtaaaacactattaacc 49296374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 51353452 - 51353490
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  51353452 aaatgacctatattacagggggtaaatcactattaaccc 51353490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 16291422 - 16291463
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||| |||||||||| || ||||||||||||||||||    
T  16291422 caaaaatgatctatattacagggtgtaaaacactattaaccc 16291463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 17494569 - 17494606
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaacc 56  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  17494569 aaatgacctatattacaggggttaaaacactattaacc 17494606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 24560728 - 24560765
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaa 54  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  24560728 aaaaatgatctatattacaaggggtaaaacaccattaa 24560765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 27450112 - 27450153
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||| ||||||||| |||||||||||| ||||||||    
T  27450112 caaaaatgacatatattacagggggtaaaacaccattaaccc 27450153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 30966865 - 30966906
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||    
T  30966865 caaaaataacctatattacaaggggtaaatcaccattaaccc 30966906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 31592569 - 31592528
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacccc 58  Q
    |||||| |||||||||||| |||||||||||| |||||||||    
T  31592569 aaaaataacctatattacagggggtaaaacaccattaacccc 31592528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 35370404 - 35370445
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  35370404 caaaaatgacctatattacagggggtaaagcaccattaaccc 35370445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 36405869 - 36405910
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  36405869 caaaaatgacctatattacagggggtaaagcaccattaaccc 36405910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 50773329 - 50773288
Alignment:
Q  18 aaaatgacctatattacaagggg-taaaacactattaacccc 58  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  50773329 aaaatgacctatattacagggggttaaaacactattaacccc 50773288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 51902087 - 51902046
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||| |||||||||||| |||||||||||| ||||||||    
T  51902087 caaaaataacctatattacagggggtaaaacaccattaaccc 51902046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000007; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 31122293 - 31122332
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  31122293 aaaatgacctatattataaggggtaaaacactattaaccc 31122332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 36525610 - 36525649
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  36525610 aaaatgacctatattacagggggtaaaacactattaaccc 36525649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 10071466 - 10071516
Alignment:
Q  18 aaaatgacctatattacaa-ggggtaaaacactattaacccctataaaatt 67  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  10071466 aaaatgacctatattacaagggggtaaaatactattaacccttataaaatt 10071516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 19253437 - 19253399
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  19253437 aaatgacctatattacaaggggtgaaacactattaaccc 19253399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 36845473 - 36845511
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaac 55  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  36845473 aaaaatgacctatattacatggggtaaaacactattaac 36845511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 38127801 - 38127763
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  38127801 aaatgacctatattacagggggtaaaacactattaaccc 38127763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 39341307 - 39341266
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  39341307 caaaaatgacctatattacagggggtaaaacaccattaaccc 39341266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 39341371 - 39341412
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  39341371 caaaaatgacctatattacagggggtaaaacaccattaaccc 39341412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 5558263 - 5558223
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  5558263 caaaaatgacctatattacagggggtaaaacaccattaacc 5558223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 8214383 - 8214343
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  8214383 aaaaatgacctatattacagggggtaaaacaccattaaccc 8214343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 14793292 - 14793252
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  14793292 aaaaatgacctatattacagggggtaaaacaccattaaccc 14793252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 17688170 - 17688210
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  17688170 aaaaatgacctatattacagggggtaaaacaccattaaccc 17688210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 22552545 - 22552505
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  22552545 aaaaatgacctatattacagggggtaaaacaccattaaccc 22552505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 31108600 - 31108640
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  31108600 aaaaatgacctatattacagggggtaaaacaccattaaccc 31108640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 39752196 - 39752236
Alignment:
Q  18 aaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  39752196 aaaatgacctatattacaagggggtaaaacactattaaccc 39752236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 41611577 - 41611617
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  41611577 aaaaatgacctatattacagggggtaaaacaccattaaccc 41611617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 45632583 - 45632543
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  45632583 aaaaatgacctatattacagggggtaaaacaccattaaccc 45632543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 874392 - 874353
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  874392 aaaatgacctatattataaggggtaaaacattattaaccc 874353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 9419540 - 9419501
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  9419540 aaaatgacctatattacagggggtaaaacattattaaccc 9419501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 11094016 - 11093977
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  11094016 aaaatgacctatattatagggggtaaaacactattaaccc 11093977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 17920131 - 17920092
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  17920131 aaaaatgacctatattacagggggtaaaacaccattaacc 17920092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 22846052 - 22846013
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  22846052 aaaatgacttatattacagggggtaaaacactattaaccc 22846013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 29097085 - 29097124
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  29097085 aaaataacttatattacaaggggtaaaacactattaaccc 29097124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 36795194 - 36795156
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  36795194 aaaatgacctatattaca-ggggtaaaacactattaaccc 36795156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 758764 - 758802
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  758764 aaatgacctatattacagggggtaaagcactattaaccc 758802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 776314 - 776276
Alignment:
Q  19 aaatgacctatattacaag-gggtaaaacactattaacc 56  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  776314 aaatgacctatattacaagagggtaaaacactattaacc 776276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 19272700 - 19272662
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  19272700 aaatgacctatattacaggggataaaacactattaaccc 19272662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 27 - 57
Target Start/End: Original strand, 29949496 - 29949526
Alignment:
Q  27 tatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||||||||||||    
T  29949496 tatattacaaggggtaaaacactattaaccc 29949526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 31989388 - 31989350
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  31989388 aaatggcctatattacagggggtaaaacactattaaccc 31989350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 41101029 - 41101067
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  41101029 aaatgacctatattacagggggtaaagcactattaaccc 41101067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 2526393 - 2526352
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||| | ||||||||||||||||||| ||||||||||||    
T  2526393 caaaaattagctatattacaaggggtaaagcactattaaccc 2526352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 2526675 - 2526716
Alignment:
Q  17 aaaaatgacctatattacaaggg-gtaaaacactattaaccc 57  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  2526675 aaaaattacctatattacaagggagtaaaacactattaaccc 2526716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 8214575 - 8214616
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  8214575 caaaaatgacctatattacagggggtaaagcaccattaaccc 8214616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 11115507 - 11115548
Alignment:
Q  17 aaaaatgacctatattaca-aggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  11115507 aaaaatgacctatattacagaggggtaaaacaccattaaccc 11115548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 14745897 - 14745856
Alignment:
Q  17 aaaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  14745897 aaaaatgacctatattacaagggggtaaaacaccattaaccc 14745856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 14793471 - 14793512
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  14793471 caaaaatgacctatattacagggggtaaagcaccattaaccc 14793512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 18048857 - 18048817
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  18048857 caaaaatgacctatattac-aggggtaaagcactattaaccc 18048817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 24952071 - 24952112
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  24952071 caaaaatgacctatattacagggggtaaagcaccattaaccc 24952112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 29640804 - 29640763
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  29640804 caaaaatgacctatattacagggggtaaagcaccattaaccc 29640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 36944044 - 36944007
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaa 54  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  36944044 aaaaatgacctatattacagggggtaaaacaccattaa 36944007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 38470975 - 38471016
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||| ||||||||||||| |||||||||||| ||||||||    
T  38470975 caaaaaagacctatattacagggggtaaaacaccattaaccc 38471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 43766497 - 43766538
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  43766497 caaaaatgacctatattacagggggtaaagcaccattaaccc 43766538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000007; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 26399192 - 26399231
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  26399192 aaaatgacctatattacagggggtaaaacactattaaccc 26399231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 972882 - 972836
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaacccctata 62  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||    
T  972882 caaaaatgacctatattacagggggtaaaacaccattaacccatata 972836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5457120 - 5457083
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaac 55  Q
    |||||||||||||||||| |||||||||||||||||||    
T  5457120 aaaatgacctatattacagggggtaaaacactattaac 5457083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 26486574 - 26486537
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaa 54  Q
    |||||||||||||||||||||||||||| |||||||||    
T  26486574 aaaaatgacctatattacaaggggtaaagcactattaa 26486537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 35168024 - 35168065
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  35168024 caaaaatgacctatattacagggggtaaagcactattaaccc 35168065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 47839978 - 47840015
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaa 54  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  47839978 aaaaatgacctatattacagggggtaaaacactattaa 47840015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 1363256 - 1363296
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  1363256 aaaaatgacctatattacagggggtaaaacacaattaaccc 1363296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 16420952 - 16420912
Alignment:
Q  18 aaaatgacctatattacaaggg-gtaaaacactattaaccc 57  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  16420952 aaaatgacctatattacaagggtgtaaaacactattaaccc 16420912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 17724283 - 17724323
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  17724283 aaaaatgacctatattacagggggtaaaacaccattaaccc 17724323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 24004767 - 24004807
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  24004767 aaaaatgacctatattacaaggggtaaagcaccattaaccc 24004807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 26190770 - 26190730
Alignment:
Q  18 aaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  26190770 aaaatgacctatattacaagggggtaaaacactattaaccc 26190730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 30147105 - 30147065
Alignment:
Q  18 aaaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  30147105 aaaatgacctatattacaagggggtaaaacactattaaccc 30147065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 13693387 - 13693348
Alignment:
Q  18 aaaatgacctatattacaa-ggggtaaaacactattaacc 56  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  13693387 aaaatgacctatattacaagggggtaaaacactattaacc 13693348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 20158985 - 20159023
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  20158985 aaaatgacctatattaca-ggggtaaaacactattaaccc 20159023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 31883496 - 31883453
Alignment:
Q  14 atcaaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||| ||||||| ||||||||| |||||||||||||||||||||    
T  31883496 atcagaaatgacatatattacagggggtaaaacactattaaccc 31883453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 10611831 - 10611793
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  10611831 aaatgaccaatattacagggggtaaaacactattaaccc 10611793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 16421219 - 16421256
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16421219 aaatgacctatattacaaggggt-aaacactattaaccc 16421256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 21771059 - 21771097
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  21771059 aaatgacctatattacagggggtaaagcactattaaccc 21771097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 21853598 - 21853560
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  21853598 aaatgacctatattatagggggtaaaacactattaaccc 21853560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 22387184 - 22387146
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  22387184 aaaatgacctatattacagggggtaaaacactgttaacc 22387146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 27265742 - 27265704
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  27265742 aaaatgacttatattacagggggtaaaacactattaacc 27265704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 27322570 - 27322532
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  27322570 aaaatgacttatattacatggggtaaaacactattaacc 27322532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 12277229 - 12277188
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| | |||||||||| ||||||||    
T  12277229 caaaaatgacctatattacaggaggtaaaacaccattaaccc 12277188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 35384472 - 35384513
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  35384472 caaaaatgacctatattacagggggtaaagcaccattaaccc 35384513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 39160548 - 39160589
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  39160548 caaaaatgacctatattacagggggtaaagcaccattaaccc 39160589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 46584077 - 46584118
Alignment:
Q  17 aaaaatgacctatattacaag-gggtaaaacactattaaccc 57  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  46584077 aaaaatgacctatattacaagaaggtaaaacactattaaccc 46584118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 51809797 - 51809756
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||| |||||||||||| |||||||||||| ||||||||    
T  51809797 caaaaataacctatattacagggggtaaaacaccattaaccc 51809756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 52413162 - 52413121
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  52413162 caaaaatgacctatattacagggggtaaagcaccattaaccc 52413121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 6764 - 6726
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6764 aaatgacctatattacaaggggtgaaacactattaaccc 6726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 63368 - 63406
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  63368 aaatgacctatattacagggggtaaaacactattaaccc 63406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 5442 - 5483
Alignment:
Q  16 caaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||||||||||||| ||| ||||||||    
T  5442 caaaaatgacctatattacaaggggtaaagcaccattaaccc 5483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 332104 - 332067
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaac 55  Q
    |||||||||||||||||| |||||||||||||||||||    
T  332104 aaaatgacctatattacagggggtaaaacactattaac 332067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 14461 - 14509
Alignment:
Q  14 atcaaaaatgacctatattacaaggggtaaaacactattaacccctata 62  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| ||||    
T  14461 atcaaaaatgacctatattacagggggtaaagcaccattaacccttata 14509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 29700 - 29740
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  29700 aaaaatgacctatattacagggggtaaaacaccattaaccc 29740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 25282 - 25318
Alignment:
Q  21 atgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25282 atgacctatattacagggggtaaaacactattaaccc 25318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 1885 - 1846
Alignment:
Q  19 aaatgacctatattacaa-ggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  1885 aaatgacctatattacaagggggtaaaacactattaaccc 1846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 18682 - 18643
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  18682 aaaatgacctatattacaggaggtaaaacactattaaccc 18643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 306803 - 306838
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaa 54  Q
    ||||||||||||||||| ||||||||||||||||||    
T  306803 aaatgacctatattacacggggtaaaacactattaa 306838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1462 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1462
Description:

Target: scaffold1462; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 415 - 456
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaaccccta 60  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  415 aaaatgacctatattaca-ggggtaaaacactattaaacccta 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 12820 - 12858
Alignment:
Q  19 aaatgacctatattacaaggggtaaaacactattaaccc 57  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  12820 aaatgacctatattaaagggggtaaaacactattaaccc 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 2740 - 2778
Alignment:
Q  18 aaaatgacctatattacaaggggtaaaacactattaacc 56  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  2740 aaaatgacctatattatagggggtaaaacactattaacc 2778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 263243 - 263206
Alignment:
Q  17 aaaaatgacctatattacaaggggtaaaacactattaa 54  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  263243 aaaaatgacctatattacagggggtaaagcactattaa 263206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University