View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4703_low_12 (Length: 353)
Name: NF4703_low_12
Description: NF4703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4703_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 20 - 334
Target Start/End: Complemental strand, 21838984 - 21838676
Alignment:
| Q |
20 |
catatatacatctgccctactatatataggtgacgtacgcagtcagatatcccttcctggccactgctgcaaattaaaaaataaatttgttcgtataatt |
119 |
Q |
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| T |
21838984 |
catatatacatctgccctactatatataggttatgtacgcagtcagat--cccttcctggccactgctgcaaattaaaaaataaatttgttcgtatagtt |
21838887 |
T |
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| Q |
120 |
actaatttaggaaacaaaaatgtcaaatggatcacttttcctcnnnnnnnnnnnnnnnntggatcactatattaattgtttaacattaggaattagttgt |
219 |
Q |
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| T |
21838886 |
actaatttaggaaacaaaaatgtcaaatggatcacttttcctcaaaaaaaataaaaa--tggatcactatattaattgcttaacattaggaattagttgt |
21838789 |
T |
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| Q |
220 |
taaaatttataccatttcaaagaaatgacatattgtagcctaggcaacatgtcttttaaaatgttacaacatatatatgcctctagatatgtattagcaa |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| |
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| T |
21838788 |
taaaatttataccatttcaaagaaatgacatattgtagcctaagcaacatgtcttttaaaatgttaca--aaatatatgcctctagagatgtattagcaa |
21838691 |
T |
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| Q |
320 |
catttttgtaaatgt |
334 |
Q |
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||||||||||||||| |
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| T |
21838690 |
catttttgtaaatgt |
21838676 |
T |
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