View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4703_low_15 (Length: 282)

Name: NF4703_low_15
Description: NF4703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4703_low_15
NF4703_low_15
[»] chr6 (9 HSPs)
chr6 (23-272)||(22062919-22063168)
chr6 (24-272)||(19586983-19587222)
chr6 (25-162)||(18188979-18189116)
chr6 (25-178)||(23519161-23519314)
chr6 (25-151)||(17818194-17818320)
chr6 (23-107)||(18852742-18852823)
chr6 (24-69)||(29685293-29685338)
chr6 (25-66)||(24390285-24390326)
chr6 (244-272)||(29685084-29685112)
[»] chr3 (11 HSPs)
chr3 (23-272)||(6813419-6813668)
chr3 (24-275)||(12777913-12778170)
chr3 (24-272)||(15024254-15024508)
chr3 (25-151)||(20562027-20562153)
chr3 (25-151)||(20564335-20564461)
chr3 (25-151)||(20559719-20559845)
chr3 (25-116)||(13090217-13090305)
chr3 (25-116)||(9362367-9362455)
chr3 (25-107)||(13096435-13096514)
chr3 (24-70)||(3246922-3246968)
chr3 (25-116)||(20153493-20153581)
[»] chr1 (3 HSPs)
chr1 (23-272)||(27045424-27045673)
chr1 (58-151)||(22626469-22626562)
chr1 (25-116)||(21785853-21785941)
[»] chr4 (8 HSPs)
chr4 (24-272)||(15349253-15349501)
chr4 (24-272)||(14687181-14687435)
chr4 (24-268)||(42711184-42711434)
chr4 (25-151)||(45240267-45240394)
chr4 (25-114)||(11498023-11498112)
chr4 (25-107)||(18290742-18290824)
chr4 (42-151)||(11918125-11918233)
chr4 (25-151)||(10629428-10629551)
[»] chr7 (13 HSPs)
chr7 (23-272)||(540167-540416)
chr7 (24-272)||(16327176-16327430)
chr7 (24-272)||(9581453-9581707)
chr7 (24-272)||(9729305-9729559)
chr7 (24-272)||(4311279-4311532)
chr7 (24-272)||(8783498-8783752)
chr7 (109-272)||(14223144-14223313)
chr7 (25-152)||(4462117-4462244)
chr7 (25-151)||(23513747-23513873)
chr7 (25-116)||(5395853-5395944)
chr7 (25-151)||(13741099-13741225)
chr7 (25-148)||(12565684-12565807)
chr7 (25-151)||(10439748-10439874)
[»] scaffold0090 (1 HSPs)
scaffold0090 (24-272)||(29312-29566)
[»] chr8 (4 HSPs)
chr8 (24-272)||(20000852-20001103)
chr8 (25-151)||(20040479-20040605)
chr8 (25-151)||(17619422-17619545)
chr8 (25-151)||(21855186-21855309)
[»] scaffold0035 (1 HSPs)
scaffold0035 (24-272)||(51962-52216)
[»] chr5 (7 HSPs)
chr5 (24-272)||(23712116-23712370)
chr5 (25-151)||(20446255-20446381)
chr5 (25-151)||(21282320-21282447)
chr5 (25-148)||(18487473-18487596)
chr5 (25-116)||(23602050-23602138)
chr5 (25-116)||(24939246-24939334)
chr5 (25-145)||(24218516-24218633)
[»] scaffold0485 (1 HSPs)
scaffold0485 (24-272)||(11313-11568)
[»] chr2 (2 HSPs)
chr2 (25-151)||(24501008-24501134)
chr2 (25-152)||(25339516-25339643)
[»] scaffold0222 (1 HSPs)
scaffold0222 (25-148)||(18509-18632)
[»] scaffold0220 (1 HSPs)
scaffold0220 (43-162)||(11741-11860)
[»] scaffold0566 (1 HSPs)
scaffold0566 (25-161)||(1275-1411)
[»] scaffold0026 (1 HSPs)
scaffold0026 (58-162)||(17034-17138)
[»] scaffold0113 (1 HSPs)
scaffold0113 (25-116)||(38043-38131)
[»] scaffold1184 (1 HSPs)
scaffold1184 (32-66)||(537-571)
[»] scaffold0012 (2 HSPs)
scaffold0012 (25-104)||(12854-12930)
scaffold0012 (25-104)||(8745-8821)


Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 23 - 272
Target Start/End: Original strand, 22062919 - 22063168
Alignment:
Q  23 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062919 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 22063018  T
Q  123 gattcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 222  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22063019 gattctccatgcatgttggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 22063118  T
Q  223 atcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22063119 atcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 22063168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 19586983 - 19587222
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||               ||||||||||||||||||||||||||||     
T  19586983 ttgtacctgtgggttaataccaacataaatcaaattttccaccacctccagattag---------------gtagaataatcaaacaattagctctaata 19587067  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagt------ataaaagtttagataatagttctcatctatcc 217  Q
    ||||| | |  |||||||||||||| |||||   ||||| || ||||||| |||||||||||      ||| |||| |||||||||||||   |||||||    
T  19587068 attctccgtttatattggtaattgtaagtaggtccatgggttctaaggaaggacaaagtagtgagagtatataagtgtagataatagttcctctctatcc 19587167  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| ||||||||    
T  19587168 tcttgatcccttgattcagactcaccccaaacttcctagcaataaaggtgatgat 19587222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 18188979 - 18189116
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||| | ||||||||||||||||||||||| ||||||||  || |||    
T  18188979 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtattatccgaattaggtagaataatcaagcaattagcattattga 18189078  T
Q  125 ttcttcatgcatattggtaattgtgagtagagtcatgg 162  Q
     ||| ||  |||||||||||||||||| || |||||||    
T  18189079 ctctccactcatattggtaattgtgagaagggtcatgg 18189116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 178
Target Start/End: Original strand, 23519161 - 23519314
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    |||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||||||||| ||| | |    
T  23519161 tgtacccgtgggttagttccaacataaagcaaattttccaccatctccggattagttatgtccaaataaggtagaataatcaaacaattagccctattta 23519260  T
Q  125 ttcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgaca 178  Q
     | | |   |||||||||| ||||||| || ||||||| || ||||||| ||||    
T  23519261 ctttccgcacatattggtagttgtgagaagggtcatgggttataaggaaagaca 23519314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 17818320 - 17818194
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  17818320 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctacggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 17818221  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||||||||||||||||    
T  17818220 ctctccactcatattggtaattgtgag 17818194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 18852823 - 18852742
Alignment:
Q  23 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa 107  Q
    ||||||||||||||||||| ||||||||||   ||||||| |||| ||||||||||||||| || ||||||||||||||||||||    
T  18852823 tttgtacctgtgggttagtgccaacataaa---aattttctaccatctccggattagtaatatctgaattaggtagaataatcaa 18852742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 29685338 - 29685293
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacc 69  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  29685338 ttgtacctgtgggttagtactaacataaagcaaattttccaccacc 29685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 24390285 - 24390326
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccacc 66  Q
    |||||||||  |||||||||| ||||||||||||||||||||    
T  24390285 tgtacctgtttgttagtaccagcataaagcaaattttccacc 24390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 272
Target Start/End: Complemental strand, 29685112 - 29685084
Alignment:
Q  244 ccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||||||||||||||    
T  29685112 ccaaacttcttagcaataaaagtgatgat 29685084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 23 - 272
Target Start/End: Complemental strand, 6813668 - 6813419
Alignment:
Q  23 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6813668 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 6813569  T
Q  123 gattcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 222  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6813568 gattctccatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 6813469  T
Q  223 atcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6813468 atcccttgattcatactcacctcaaacttcttagcaataaaagtgatgat 6813419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 24 - 275
Target Start/End: Original strand, 12777913 - 12778170
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||     
T  12777913 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccgaattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 12778012  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| ||| ||||||| ||||||||||||| ||||||| || ||||||| ||||||||      |||| | |||||| ||||||| || || |||||||    
T  12778013 attctccattcatattgataattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtaaataagtttggataataattttcctctatcc 12778112  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgatgtc 275  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||| |||||||||    
T  12778113 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagggatgatgtc 12778170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 272
Target Start/End: Complemental strand, 15024508 - 15024254
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||| |     
T  15024508 ttgtacatgtggattagtaccaacataatgcaaattttccaccacctccggattagttatgtctggattaggtagaataataaaacaattagctctatta 15024409  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| ||| ||||||||||||||||||||| ||||||| || ||||||| ||||||||      |||||| |||| ||||||||||| | | |||||||    
T  15024408 attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagtacccctctatcc 15024309  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  15024308 tcttgatcccttgattcacactcaccccaaactttctagcaataaaagtgatgat 15024254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 20562153 - 20562027
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||| ||| | | ||||| |||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20562153 tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20562054  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||||||||||||||||    
T  20562053 ctctccactcatattggtaattgtgag 20562027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 20564461 - 20564335
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||| ||| | | ||||| |||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20564461 tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20564362  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||||||||||||||||    
T  20564361 ctctccactcatattggtaattgtgag 20564335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 20559845 - 20559719
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    |||| |||||||||||| |||||| ||| | | ||||| |||||||||| ||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20559845 tgtatctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20559746  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||||||||||||||||    
T  20559745 ctctccactcatattggtaattgtgag 20559719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 13090217 - 13090305
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagc 116  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||    
T  13090217 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagc 13090305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 9362367 - 9362455
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagc 116  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| |  ||||||||||||||||||||  |||||||    
T  9362367 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatttgaattaggtagaataatcaagaaattagc 9362455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 13096514 - 13096435
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa 107  Q
    |||||||||||||||||  |||||||||   | ||||| ||||||| |||||||||||| || ||||||||||||||||||||    
T  13096514 tgtacctgtgggttagtgtcaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaa 13096435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 3246922 - 3246968
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacct 70  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||    
T  3246922 ttgtacctgtgggttagtacaaaaataaaacaaattttccaccacct 3246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 20153581 - 20153493
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagc 116  Q
    ||||||||| ||||||| ||||||||||  || ||||| ||||||||| |||||| ||| || |||   ||||||||||||||  |||||||    
T  20153581 tgtacctgtaggttagtgccaacataaacaaagttttctaccacctccagattaggaatatctgaa---ggtagaataatcaagaaattagc 20153493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 23 - 272
Target Start/End: Complemental strand, 27045673 - 27045424
Alignment:
Q  23 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045673 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 27045574  T
Q  123 gattcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 222  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045573 gattctccatgcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 27045474  T
Q  223 atcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27045473 atcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 27045424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 22626469 - 22626562
Alignment:
Q  58 ttttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattcttcatgcatattggtaattgtgag 151  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||  || ||| ||| ||  ||||||||||||||||||    
T  22626469 ttttctaccaccaccggattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgag 22626562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 21785853 - 21785941
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagc 116  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| || ||||||||||||| ||||||  |||||||    
T  21785853 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaaaaatcaagaaattagc 21785941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 15349253 - 15349501
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15349253 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 15349352  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 223  Q
    ||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15349353 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 15349452  T
Q  224 tcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15349453 tcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 15349501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 14687181 - 14687435
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  14687181 ttgtacctgtgggttagtaccaacataaagcaaattttccaccgcctccggattagtaatgtccgaattaggtagcataatcaaacaattagctctaata 14687280  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| |||  |||||||||||||||||||| ||||||| || ||||||||||||||||      |||||| |||||||||||||||||||| |||||||    
T  14687281 attctccatttatattggtaattgtgagtagggtcatgggttctaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctatcc 14687380  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14687381 tcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 14687435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 24 - 268
Target Start/End: Original strand, 42711184 - 42711434
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  42711184 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 42711283  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| ||| ||||||||||||| ||||||  ||||||| || ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  42711284 attctccattcatattggtaattatgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 42711383  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtga 268  Q
    ||||||||| |||||||| |||||||| |||| ||||||||||||||||||    
T  42711384 tcttgatcctttgattcacactcaccctaaacctcttagcaataaaagtga 42711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 45240267 - 45240394
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa-ttagctctaatg 123  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| | |||||| |||||||||||||| ||| |||||  || ||    
T  45240267 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg 45240366  T
Q  124 attcttcatgcatattggtaattgtgag 151  Q
    | ||| ||  ||||||||||||||||||    
T  45240367 actctccactcatattggtaattgtgag 45240394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 11498023 - 11498112
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaatta 114  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| |  |||||||||||||||||||| ||||||    
T  11498023 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatttgaattaggtagaataatcaagcaatta 11498112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 18290824 - 18290742
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaa 107  Q
    ||||||||||||||||| |||||||||| ||| ||||| | |||||||||||||||||| || ||||||||||||||||||||    
T  18290824 tgtacctgtgggttagtgccaacataaaccaagttttctatcacctccggattagtaatatctgaattaggtagaataatcaa 18290742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 11918125 - 11918233
Alignment:
Q  42 accaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattcttcatgcatattgg 141  Q
    ||||||||||| ||| ||||||||||||| ||| ||||| ||||||| ||||||||||||||||||| ||||||| ||| ||| | | ||  ||||||||    
T  11918125 accaacataaaacaatttttccaccaccttcgggttagttatgtccggattaggtagaataatcaaa-aattagccctattgactttccactcatattgg 11918223  T
Q  142 taattgtgag 151  Q
    ||||||||||    
T  11918224 taattgtgag 11918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 10629551 - 10629428
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| ||||||||||   | ||||| ||| ||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  10629551 tgtacctgtgggttagtgccaacataaa---agttttctaccgccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 10629455  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  |||||||| |||||||||    
T  10629454 ctctccactcatattgggaattgtgag 10629428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 23 - 272
Target Start/End: Original strand, 540167 - 540416
Alignment:
Q  23 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  540167 tttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctttaat 540266  T
Q  123 gattcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 222  Q
    |||||| | | ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  540267 gattctcctttcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttg 540366  T
Q  223 atcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  540367 atcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 540416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 16327176 - 16327430
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  16327176 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaatagtcaaacaattagctctaata 16327275  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| ||| ||||||||||||||||||||| ||||||| || ||||||| ||||||||      |||||| ||||||||||||||||| || |||||||    
T  16327276 attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc 16327375  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  16327376 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat 16327430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 24 - 272
Target Start/End: Complemental strand, 9581707 - 9581453
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||     
T  9581707 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 9581608  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    || || ||| ||||||| ||||||||||||  ||||||| || ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  9581607 atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 9581508  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  9581507 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat 9581453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 24 - 272
Target Start/End: Complemental strand, 9729559 - 9729305
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||     
T  9729559 ttgtacctgtggattagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagttctaata 9729460  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    || || ||| ||||||| ||||||||||||  ||||||| || ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  9729459 atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 9729360  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  9729359 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat 9729305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 272
Target Start/End: Complemental strand, 4311532 - 4311279
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4311532 ttgtacatgtgggttagtaccaacgtaaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaata 4311433  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| ||| ||||||||||||||||||||| | ||||| || |||| || ||||||||      |||||| |||| ||||||||||||| | |||||||    
T  4311432 attctccattcatattggtaattgtgagtagggccatgggttctaagaaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc 4311333  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||| ||||||||| |||| ||||||||||| ||| |||||| ||||||||    
T  4311332 tcttgatctcttgattcacactc-ccccaaacttcctagaaataaaggtgatgat 4311279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 8783498 - 8783752
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| || ||||     
T  8783498 ttgtacatgtgggttagtaccaacataaagcaaattttccaccacctccggattagttatgtccgaattagggagaataatcaaaaaattatctgtaata 8783597  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| | | |||||| |||||||||||||| | ||||| || ||||||| | ||||||      |||||| |||| ||||||||||||| | |||||||    
T  8783598 attctcctttcatatttgtaattgtgagtagggccatgggttgtaaggaagggcaaagtagtgagagtatataagtctagataatagttcccctctatcc 8783697  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
     |||||||| |||||||| |||||||||||||||| |||||||||| ||||||||    
T  8783698 ccttgatccattgattcacactcaccccaaacttcctagcaataaaggtgatgat 8783752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 109 - 272
Target Start/End: Original strand, 14223144 - 14223313
Alignment:
Q  109 caattagctctaatgattcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagt------ataaaagtttagataat 202  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||      ||| |||||||||||||    
T  14223144 caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtgagagtatataagtttagataat 14223243  T
Q  203 agttctcatctatcctcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14223244 agttctcctctttcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 14223313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 152
Target Start/End: Original strand, 4462117 - 4462244
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| ||| ||||| |||  || ||||||||||||||||||||||| |||||||||||    
T  4462117 tgtaccagtgggttagtaccaatataaagcaaattttccaccaccttcgggttagttatgaacggattaggtagaataatcaaacaatgagctctaatga 4462216  T
Q  125 ttcttcatgcatattggtaattgtgagt 152  Q
    || |  |  ||||||||| |||||||||    
T  4462217 ttttctaatcatattggtcattgtgagt 4462244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 23513873 - 23513747
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| ||||||||||  || ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||  || |||    
T  23513873 tgtacctgtgggttagtgccaacataaacaaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagtaattagcattattga 23513774  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||| ||||||||||||    
T  23513773 ctctccactcatataggtaattgtgag 23513747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 5395944 - 5395853
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagc 116  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| || ||||||||||||||||||||  |||||||    
T  5395944 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagc 5395853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 13741225 - 13741099
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||| ||||| ||||||||||   | ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||| |  || |||    
T  13741225 tgtacctgtggattagtgccaacataaacatagttttctaccacctccgaattagtaatgtccgaattaggtagaataatcaagcaattatcattattga 13741126  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||||||||||||||||    
T  13741125 ctctccactcatattggtaattgtgag 13741099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 12565807 - 12565684
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    |||||| ||||||||||||||||||||| ||| ||||| |||||||||| ||||||||| || |||||||||  |||||||||  |||||||  || |||    
T  12565807 tgtaccggtgggttagtaccaacataaaccaagttttctaccacctccgaattagtaatatctgaattaggttaaataatcaagaaattagcattattga 12565708  T
Q  125 ttcttcatgcatattggtaattgt 148  Q
     ||| ||  |||||||||||||||    
T  12565707 ctctccactcatattggtaattgt 12565684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 10439748 - 10439874
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||| | | |||||||| || ||||||||||||||||||||  ||||| |  || |||    
T  10439748 tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcagcttagtaatatctgaattaggtagaataatcaagaaattatcattattga 10439847  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||||||||||||||||    
T  10439848 ctctccactcatattggtaattgtgag 10439874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 24 - 272
Target Start/End: Complemental strand, 29566 - 29312
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29566 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcatacaattagctctaatg 29467  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  29466 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc 29367  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29366 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 29312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 24 - 272
Target Start/End: Complemental strand, 20001103 - 20000852
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20001103 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 20001004  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||||||      |||||||||||||||||||||||||||||||||||    
T  20001003 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc 20000904  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||| ||||||||||||   |||||||||||||||||||||    
T  20000903 tcttgatcccttgattcacactcaccccaaa---cttagcaataaaagtgatgat 20000852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 20040479 - 20040605
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||||||| | | ||||| |||||||| ||||||||||| || ||||||||||||||||||||  ||||||   || |||    
T  20040479 tgtacctgtgggttagtgccaacataaacctagttttctaccacctctggattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20040578  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||||||||||||||||    
T  20040579 ctctccactcatattggtaattgtgag 20040605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 17619545 - 17619422
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  17619545 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 17619449  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  |||||||| |||||||||    
T  17619448 ctctccactcatattggaaattgtgag 17619422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 21855186 - 21855309
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||| ||||||| ||||||||||   | ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  21855186 tgtacctgtaggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 21855282  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||||||||||||||||    
T  21855283 ctctccactcatattggtaattgtgag 21855309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 51962 - 52216
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||     
T  51962 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata 52061  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    ||||| ||| ||||||||||||||||||||| ||||||| || ||||||| ||||||||      |||||| ||||||||||||||||| || |||||||    
T  52062 attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc 52161  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  52162 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat 52216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 2e-80; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 23712116 - 23712370
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 123  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||     
T  23712116 ttgtacctgtgggttaggaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaaaaattagttctaata 23712215  T
Q  124 attcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc 217  Q
    || || ||| ||||||||||||||||||||  ||||||| || ||||||| ||||||||      |||||| |||||| ||||||| || ||||||||||    
T  23712216 atcctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 23712315  T
Q  218 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    |||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||    
T  23712316 tcttgatcccttgattcacactcaccctaaacctcttagcaacaaaagtgatgat 23712370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 20446255 - 20446381
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  20446255 tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 20446354  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||  ||||||||||||||||||    
T  20446355 ctctccactcatattggtaattgtgag 20446381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 21282320 - 21282447
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaa-ttagctctaatg 123  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| | |||||| |||||||||||||| ||| |||||  || ||    
T  21282320 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg 21282419  T
Q  124 attcttcatgcatattggtaattgtgag 151  Q
    | ||| ||  ||||||||||||||||||    
T  21282420 actctccactcatattggtaattgtgag 21282447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 18487473 - 18487596
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||| |||||| |||| || ||||||||||||||||||||  |||||||  || |||    
T  18487473 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctcaggattaataatatctgaattaggtagaataatcaagaaattagcattattga 18487572  T
Q  125 ttcttcatgcatattggtaattgt 148  Q
     ||| ||  |||||||||||||||    
T  18487573 ctctccactcatattggtaattgt 18487596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 23602050 - 23602138
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagc 116  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| || ||||||||||||||||||||  |||||||    
T  23602050 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagc 23602138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 24939334 - 24939246
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagc 116  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| || ||||||||| || ||||||||||||||||||||  |||||||    
T  24939334 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcgaattagtaatatctgaattaggtagaataatcaagaaattagc 24939246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 24218633 - 24218516
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||| ||||||||||| |||||||||    | ||||| |||| ||||||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  24218633 tgtacatgtgggttagtgccaacataat---agttttctaccatctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 24218537  T
Q  125 ttcttcatgcatattggtaat 145  Q
     ||| ||  ||||||||||||    
T  24218536 ctctccactcatattggtaat 24218516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 24 - 272
Target Start/End: Original strand, 11313 - 11568
Alignment:
Q  24 ttgtacctgtgggttagtaccaacataaagcaaatttt-ccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaat 122  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  11313 ttgtacctgtgggttagtaccaacataaagcaaatttttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagctctaat 11412  T
Q  123 gattcttcatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtag------tataaaagtttagataatagttctcatctatc 216  Q
     ||||| ||  ||||||||||||||||||||  ||||||| || ||||||| ||||||||||      |||| |||| ||||||||||||| | ||||||    
T  11413 aattctccactcatattggtaattgtgagtatggtcatgggttctaaggaaggacaaagtagtgagattatataagtctagataatagttcccctctatc 11512  T
Q  217 ctcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 272  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||    
T  11513 ctcttgatcccttgattcacactcaccccaaactttctagcaataaaggtgatgat 11568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 24501134 - 24501008
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  || |||    
T  24501134 tgtacctgtgggttagtgccaacataaatcaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagcaattagcattattga 24501035  T
Q  125 ttcttcatgcatattggtaattgtgag 151  Q
     ||| ||   |||||||||||||||||    
T  24501034 ctctccactaatattggtaattgtgag 24501008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 152
Target Start/End: Original strand, 25339516 - 25339643
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||| |||| |||||| ||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||| |||    
T  25339516 tgtacatgtgagttagtgccaacataaagaaaattttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagccctattga 25339615  T
Q  125 ttcttcatgcatattggtaattgtgagt 152  Q
       | ||  |||||||||||||||||||    
T  25339616 ccttccactcatattggtaattgtgagt 25339643  T

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Target: scaffold0222 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 18632 - 18509
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| || ||||||||||||||||||||  |||||||  || |||    
T  18632 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 18533  T
Q  125 ttcttcatgcatattggtaattgt 148  Q
     ||| ||  |||||||||||||||    
T  18532 ctctccactcatattggtaattgt 18509  T

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Target: scaffold0220 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 11741 - 11860
Alignment:
Q  43 ccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattcttcatgcatattggt 142  Q
    |||||||||| ||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||  || ||| ||| ||  |||||||||    
T  11741 ccaacataaaccaagttttctaccacctccagattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggt 11840  T
Q  143 aattgtgagtagagtcatgg 162  Q
    ||||||||| || |||||||    
T  11841 aattgtgagaagggtcatgg 11860  T

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Target: scaffold0566 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 1411 - 1275
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatga 124  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||||| |||||||||| || ||||||||||||||||||||  |||||||   | |||    
T  1411 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccagattagtaatatctgaattaggtagaataatcaagaaattagcataattga 1312  T
Q  125 ttcttcatgcatattggtaattgtgagtagagtcatg 161  Q
     ||| ||  ||||||||||||||| || || ||||||    
T  1311 ctctccactcatattggtaattgttagaagggtcatg 1275  T

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Target: scaffold0026 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 17138 - 17034
Alignment:
Q  58 ttttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatgattcttcatgcatattggtaattgtgagtagagt 157  Q
    ||||| |||||||| | ||||||||| ||||||||||||||||||||||| ||||||||  || ||| ||| ||  |||||||||||||||||| || ||    
T  17138 ttttctaccacctctgtattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaagggt 17039  T
Q  158 catgg 162  Q
    |||||    
T  17038 catgg 17034  T

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Target: scaffold0113 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 38043 - 38131
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagc 116  Q
    ||||||||||||||||| ||||||||||   | ||||| |||||||  | ||||||||| || ||||||||||||||||||||  |||||||    
T  38043 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttagaattagtaatatctgaattaggtagaataatcaagaaattagc 38131  T

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Target: scaffold1184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1184
Description:

Target: scaffold1184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 537 - 571
Alignment:
Q  32 gtgggttagtaccaacataaagcaaattttccacc 66  Q
    |||||||||||||||||||||||||||||||||||    
T  537 gtgggttagtaccaacataaagcaaattttccacc 571  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 12854 - 12930
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataat 104  Q
    ||||||||||||||||| |||||||||   || ||||| ||||||||| |||||||||| ||  | ||||||||||||||    
T  12854 tgtacctgtgggttagtgccaacataa---aagttttctaccacctccagattagtaatatctaatttaggtagaataat 12930  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 8745 - 8821
Alignment:
Q  25 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataat 104  Q
    ||||| ||||||||||| ||||||||||   | ||||| ||||||||| |||||||||| ||  | ||||||||||||||    
T  8745 tgtacatgtgggttagtgccaacataaa---agttttctaccacctccagattagtaatatctaatttaggtagaataat 8821  T

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