View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4704_low_32 (Length: 267)
Name: NF4704_low_32
Description: NF4704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4704_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 18 - 255
Target Start/End: Complemental strand, 10506276 - 10506039
Alignment:
| Q |
18 |
atttgaagggtgatgctagaactcaatggagaattggaccgtttggttcttttaaattcgggtgtaaacttgagtgccaacttaaatttcatcctcttaa |
117 |
Q |
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| T |
10506276 |
atttgaagggtgatgctagaactcaatggagaattggaccgtttggttcttttaaattcgggtgtaaacttgagtgtcaacttaaatttcatcctcttaa |
10506177 |
T |
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| Q |
118 |
tggtagttatattccttcacgttgcacttctcaaaccaaatgattctttctttgtttccattttgttttgactatgttattgttatgtataatcaaaatt |
217 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
10506176 |
tggtagttatattccttcacgttgcacttctcaatccaaatgattctttctttgtttccattttgttttgactatgttattgttatgtataaacaaaatt |
10506077 |
T |
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| Q |
218 |
ggacatagtctcattctcattctcttctatgtttctct |
255 |
Q |
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| T |
10506076 |
ggacatagtctcattctcattctcttctatgtttctct |
10506039 |
T |
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