View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4705_high_5 (Length: 361)

Name: NF4705_high_5
Description: NF4705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4705_high_5
NF4705_high_5
[»] chr6 (24 HSPs)
chr6 (184-341)||(9953036-9953193)
chr6 (188-347)||(23388989-23389149)
chr6 (188-347)||(23379650-23379810)
chr6 (184-339)||(5739034-5739190)
chr6 (218-293)||(13004434-13004509)
chr6 (232-339)||(34501462-34501569)
chr6 (185-341)||(2371414-2371570)
chr6 (184-265)||(28666095-28666176)
chr6 (184-275)||(10289186-10289277)
chr6 (184-293)||(31071494-31071603)
chr6 (199-254)||(20181288-20181343)
chr6 (199-254)||(22154648-22154703)
chr6 (230-291)||(6512442-6512503)
chr6 (230-293)||(28112641-28112704)
chr6 (184-221)||(12981151-12981188)
chr6 (234-282)||(12991556-12991604)
chr6 (184-223)||(9314765-9314804)
chr6 (184-223)||(21633551-21633590)
chr6 (184-223)||(22463515-22463554)
chr6 (184-223)||(28116940-28116979)
chr6 (186-223)||(9840320-9840357)
chr6 (184-224)||(2378435-2378475)
chr6 (301-333)||(13004611-13004643)
chr6 (184-224)||(15543215-15543255)
[»] chr3 (34 HSPs)
chr3 (184-347)||(35411676-35411840)
chr3 (184-347)||(6921890-6922053)
chr3 (184-347)||(23299390-23299553)
chr3 (184-347)||(16185493-16185656)
chr3 (184-341)||(538015-538172)
chr3 (184-347)||(52198305-52198468)
chr3 (184-341)||(10884018-10884175)
chr3 (184-347)||(18645578-18645741)
chr3 (184-275)||(53814971-53815062)
chr3 (184-309)||(10107489-10107614)
chr3 (184-338)||(29344618-29344773)
chr3 (184-294)||(3839790-3839903)
chr3 (184-275)||(16243166-16243257)
chr3 (185-275)||(9380012-9380102)
chr3 (184-274)||(54460367-54460457)
chr3 (184-274)||(34984668-34984758)
chr3 (184-293)||(19302255-19302364)
chr3 (184-271)||(10880776-10880863)
chr3 (184-275)||(41976321-41976412)
chr3 (192-275)||(54736759-54736842)
chr3 (184-265)||(20729395-20729477)
chr3 (187-276)||(43808881-43808970)
chr3 (206-282)||(31548573-31548649)
chr3 (184-288)||(17532565-17532669)
chr3 (205-286)||(19305445-19305526)
chr3 (206-347)||(22994429-22994570)
chr3 (268-312)||(55032789-55032833)
chr3 (296-347)||(9380143-9380194)
chr3 (184-220)||(31857055-31857091)
chr3 (184-224)||(50462415-50462455)
chr3 (184-223)||(9157508-9157547)
chr3 (184-222)||(2280741-2280779)
chr3 (184-222)||(42355298-42355336)
chr3 (184-224)||(43926124-43926164)
[»] chr7 (23 HSPs)
chr7 (184-347)||(8276012-8276175)
chr7 (184-347)||(26556510-26556673)
chr7 (184-347)||(10431386-10431549)
chr7 (184-339)||(4542074-4542229)
chr7 (184-339)||(2442122-2442277)
chr7 (184-275)||(45288047-45288138)
chr7 (184-275)||(45291383-45291474)
chr7 (184-294)||(20081530-20081640)
chr7 (184-282)||(17729973-17730071)
chr7 (184-275)||(9865551-9865642)
chr7 (184-275)||(9080376-9080467)
chr7 (184-275)||(10344616-10344707)
chr7 (184-275)||(4596833-4596924)
chr7 (184-275)||(4694723-4694814)
chr7 (215-337)||(9273882-9274003)
chr7 (184-293)||(16164889-16164998)
chr7 (184-293)||(48644616-48644725)
chr7 (184-293)||(6602621-6602730)
chr7 (184-253)||(48645852-48645921)
chr7 (184-224)||(37167030-37167070)
chr7 (184-222)||(11826392-11826430)
chr7 (235-265)||(18563366-18563396)
chr7 (184-213)||(13450736-13450765)
[»] chr5 (26 HSPs)
chr5 (184-347)||(43490793-43490956)
chr5 (184-347)||(42061486-42061649)
chr5 (184-347)||(22937892-22938055)
chr5 (184-339)||(32837083-32837238)
chr5 (184-347)||(37214766-37214929)
chr5 (184-347)||(28442018-28442181)
chr5 (184-347)||(31862872-31863035)
chr5 (184-312)||(14376706-14376834)
chr5 (184-276)||(28788309-28788401)
chr5 (184-293)||(14016927-14017036)
chr5 (184-275)||(21336650-21336742)
chr5 (184-275)||(21827949-21828041)
chr5 (184-293)||(17747617-17747726)
chr5 (186-275)||(39191333-39191422)
chr5 (184-275)||(40916795-40916889)
chr5 (184-275)||(18031710-18031801)
chr5 (189-338)||(4100278-4100431)
chr5 (184-248)||(7270241-7270305)
chr5 (206-265)||(2836702-2836761)
chr5 (184-265)||(30065562-30065643)
chr5 (218-275)||(2837584-2837641)
chr5 (184-233)||(25329456-25329505)
chr5 (230-293)||(7624303-7624366)
chr5 (184-224)||(41307405-41307445)
chr5 (296-347)||(21336558-21336609)
chr5 (235-275)||(33551385-33551425)
[»] chr4 (48 HSPs)
chr4 (184-347)||(15431164-15431327)
chr4 (184-347)||(15437778-15437941)
chr4 (184-347)||(18910604-18910767)
chr4 (184-341)||(33410805-33410962)
chr4 (184-336)||(3798644-3798796)
chr4 (184-334)||(5669628-5669778)
chr4 (184-347)||(5721808-5721971)
chr4 (184-347)||(19865480-19865643)
chr4 (184-339)||(5680469-5680624)
chr4 (184-347)||(9716951-9717114)
chr4 (184-302)||(14571026-14571144)
chr4 (185-347)||(19861124-19861286)
chr4 (184-333)||(12237354-12237503)
chr4 (184-334)||(49269735-49269885)
chr4 (234-347)||(40617649-40617762)
chr4 (184-312)||(37104113-37104241)
chr4 (24-119)||(18449136-18449231)
chr4 (192-275)||(21418987-21419070)
chr4 (230-347)||(53093767-53093884)
chr4 (184-275)||(3718336-3718427)
chr4 (184-275)||(12782106-12782197)
chr4 (192-275)||(40794200-40794283)
chr4 (184-293)||(29323979-29324088)
chr4 (184-293)||(44809795-44809904)
chr4 (184-272)||(44164001-44164090)
chr4 (184-265)||(52007350-52007431)
chr4 (184-275)||(15430674-15430766)
chr4 (184-275)||(15437288-15437380)
chr4 (184-275)||(27013229-27013321)
chr4 (184-265)||(53010377-53010458)
chr4 (184-275)||(27677874-27677966)
chr4 (184-275)||(24044966-24045057)
chr4 (189-290)||(34320738-34320839)
chr4 (184-292)||(56198029-56198137)
chr4 (184-275)||(19826701-19826793)
chr4 (184-275)||(27691933-27692025)
chr4 (184-265)||(19819950-19820032)
chr4 (184-293)||(56194722-56194831)
chr4 (184-265)||(35509201-35509280)
chr4 (184-293)||(47114776-47114885)
chr4 (184-289)||(15405793-15405898)
chr4 (184-293)||(33926121-33926230)
chr4 (230-293)||(15812973-15813036)
chr4 (234-275)||(37741471-37741512)
chr4 (184-224)||(38284375-38284415)
chr4 (184-212)||(17669447-17669475)
chr4 (184-224)||(34018659-34018699)
chr4 (184-224)||(48416408-48416448)
[»] chr8 (24 HSPs)
chr8 (184-347)||(45156755-45156918)
chr8 (184-347)||(14420864-14421027)
chr8 (184-347)||(5540832-5540995)
chr8 (184-347)||(10663011-10663174)
chr8 (184-341)||(18722152-18722310)
chr8 (184-333)||(33878089-33878238)
chr8 (188-347)||(25595521-25595681)
chr8 (219-347)||(25228049-25228175)
chr8 (188-347)||(25592336-25592496)
chr8 (184-347)||(43682634-43682798)
chr8 (184-293)||(18826725-18826834)
chr8 (184-338)||(12582218-12582372)
chr8 (24-119)||(15662654-15662749)
chr8 (184-293)||(22174782-22174891)
chr8 (184-275)||(30640505-30640598)
chr8 (184-293)||(14589707-14589816)
chr8 (184-275)||(19792926-19793019)
chr8 (184-260)||(23612569-23612645)
chr8 (184-254)||(5981150-5981220)
chr8 (230-294)||(38249248-38249312)
chr8 (184-223)||(20261647-20261686)
chr8 (184-223)||(21048277-21048316)
chr8 (184-224)||(16952998-16953038)
chr8 (299-347)||(30640624-30640672)
[»] chr1 (22 HSPs)
chr1 (184-347)||(29644145-29644308)
chr1 (184-347)||(2793299-2793462)
chr1 (184-347)||(49499405-49499568)
chr1 (184-339)||(1951190-1951345)
chr1 (184-282)||(41059135-41059234)
chr1 (184-271)||(2404722-2404809)
chr1 (184-293)||(45961598-45961707)
chr1 (185-293)||(27537104-27537212)
chr1 (230-347)||(34733100-34733217)
chr1 (184-265)||(21019287-21019367)
chr1 (184-275)||(42021721-42021812)
chr1 (184-275)||(21108302-21108393)
chr1 (184-293)||(31204014-31204123)
chr1 (230-293)||(6071791-6071854)
chr1 (184-223)||(47708778-47708817)
chr1 (184-221)||(22460406-22460443)
chr1 (184-224)||(45940621-45940661)
chr1 (184-223)||(3088696-3088735)
chr1 (184-213)||(22454290-22454319)
chr1 (184-221)||(49147113-49147150)
chr1 (184-224)||(28110283-28110323)
chr1 (184-224)||(37184743-37184783)
[»] chr2 (34 HSPs)
chr2 (184-347)||(25869835-25869998)
chr2 (184-347)||(25873203-25873366)
chr2 (184-347)||(26358672-26358835)
chr2 (184-347)||(36809272-36809435)
chr2 (184-347)||(38006123-38006286)
chr2 (184-347)||(25139877-25140040)
chr2 (184-338)||(16788389-16788542)
chr2 (184-347)||(25821754-25821922)
chr2 (184-338)||(30275537-30275691)
chr2 (184-312)||(15466170-15466298)
chr2 (184-275)||(10599951-10600042)
chr2 (184-293)||(38014636-38014745)
chr2 (184-275)||(3874482-3874573)
chr2 (184-293)||(31430529-31430638)
chr2 (184-259)||(5665830-5665905)
chr2 (184-265)||(43722904-43722985)
chr2 (184-272)||(13972725-13972813)
chr2 (184-265)||(5104953-5105032)
chr2 (186-275)||(13136764-13136853)
chr2 (184-312)||(29439597-29439723)
chr2 (187-293)||(36985626-36985732)
chr2 (184-265)||(6825974-6826055)
chr2 (184-293)||(45453051-45453160)
chr2 (219-293)||(31428340-31428414)
chr2 (184-293)||(45456300-45456409)
chr2 (184-224)||(9189532-9189572)
chr2 (184-224)||(37280556-37280596)
chr2 (184-224)||(43208769-43208809)
chr2 (184-222)||(31586785-31586823)
chr2 (184-212)||(1504290-1504318)
chr2 (184-212)||(1507492-1507520)
chr2 (184-224)||(8887842-8887882)
chr2 (184-224)||(25957323-25957363)
chr2 (184-224)||(40780658-40780698)
[»] scaffold0035 (1 HSPs)
scaffold0035 (184-347)||(61597-61760)
[»] scaffold0005 (2 HSPs)
scaffold0005 (184-302)||(246232-246350)
scaffold0005 (195-341)||(290974-291120)
[»] scaffold0015 (1 HSPs)
scaffold0015 (184-300)||(197242-197358)
[»] scaffold0757 (1 HSPs)
scaffold0757 (184-275)||(4563-4654)
[»] scaffold0080 (1 HSPs)
scaffold0080 (207-347)||(26277-26408)
[»] scaffold0270 (3 HSPs)
scaffold0270 (184-275)||(969-1060)
scaffold0270 (184-275)||(4329-4420)
scaffold0270 (184-275)||(11459-11550)
[»] scaffold0334 (1 HSPs)
scaffold0334 (184-308)||(18463-18588)
[»] scaffold0381 (1 HSPs)
scaffold0381 (184-275)||(6462-6554)
[»] scaffold0520 (1 HSPs)
scaffold0520 (184-274)||(4790-4880)
[»] scaffold0045 (1 HSPs)
scaffold0045 (184-290)||(88965-89071)
[»] scaffold1993 (1 HSPs)
scaffold1993 (184-275)||(1045-1136)
[»] scaffold1684 (1 HSPs)
scaffold1684 (184-289)||(369-474)
[»] scaffold0567 (1 HSPs)
scaffold0567 (184-223)||(7016-7055)


Alignment Details
Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 184 - 341
Target Start/End: Original strand, 9953036 - 9953193
Alignment:
Q  184 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9953036 tgatgacagtctgtcatttcac-atttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 9953134  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 341  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9953135 ttttgaagaaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttggagcaca 9953193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 188 - 347
Target Start/End: Complemental strand, 23389149 - 23388989
Alignment:
Q  188 gacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 286  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||| |||||||||| ||||||  ||| ||||||||||||||||||||    
T  23389149 gacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacatgcaagcttaaacagcaaagaaaacaagaaaaatagaagatttt 23389051  T
Q  287 -gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
     |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  23389050 tgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttggagcacatgatga 23388989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 188 - 347
Target Start/End: Complemental strand, 23379810 - 23379650
Alignment:
Q  188 gacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 286  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||| |||||||||| || |||  ||| ||||||||||||||||||||    
T  23379810 gacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 23379712  T
Q  287 -gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
     |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  23379711 tgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttggagcacatgatga 23379650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 184 - 339
Target Start/End: Complemental strand, 5739190 - 5739034
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt--atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaag 281  Q
    |||||||||||||||||||||||||||||| || |||||  ||||||| || |||||||||||||||  ||| ||||||  ||| |||||||||||||||    
T  5739190 tgatgacagtcagtcattcactatttttagagttttttttcatgatatgtt-gagttcacaagcaagtctaaacagcaaagaaagcaagaaaaatagaag 5739092  T
Q  282 attttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 339  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  5739091 attttgaagaaagcaaaatcgtgtcacgattgttaaaaacatgtcacgatttggagca 5739034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 13004434 - 13004509
Alignment:
Q  218 tttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13004434 tttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagattttgaagaaa 13004509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 34501462 - 34501569
Alignment:
Q  232 ttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgat 331  Q
    ||||||||||||||||| |||| ||||||  ||| ||||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  34501462 ttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaaaagaagattttgatgaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgat 34501561  T
Q  332 ttggagca 339  Q
    ||||||||    
T  34501562 ttggagca 34501569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 341
Target Start/End: Original strand, 2371414 - 2371570
Alignment:
Q  185 gatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||| ||| ||| |||||||||||||| ||| ||||| |||||||||| ||||||| ||||||| |||| ||||||  ||| |||||||||||||||||    
T  2371414 gatgatagttagttattcactatttttaatgttttttttatgatatttt-gagttcataagcaagtttaaacagcaaataaaacaagaaaaatagaagat 2371512  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 341  Q
    |||||||||||||||||||| |||||||||| ||||| || ||  ||||| |||||||    
T  2371513 tttgaagaaagcaaaatcgtatcacgattgttgaaaatgtatcgagatttagagcaca 2371570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 28666176 - 28666095
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28666176 tgatgacagtcagtcattcgttatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 28666095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 10289186 - 10289277
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  10289186 tgatgacagtaagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcaacaagaaaagcaagaaaaa 10289277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 31071494 - 31071603
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||  ||||||||||||| |||| ||||| |||| |||||||| ||||||||||| || |||| ||| || |||||||| ||||    
T  31071494 tgatgacagtcagtcattctttatttttagtgtcattttcatgatgtttt-gagttcacgagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 31071592  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  31071593 ttttgaagaaa 31071603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 20181288 - 20181343
Alignment:
Q  199 attcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaag 254  Q
    |||| |||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  20181288 attcgctatttttagagtccttttgtgatatttttgagttcacaagcaagcttaag 20181343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 22154703 - 22154648
Alignment:
Q  199 attcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaag 254  Q
    |||| |||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  22154703 attcgctatttttagagtccttttgtgatatttttgagttcacaagcaagcttaag 22154648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 6512442 - 6512503
Alignment:
Q  230 ttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaaga 291  Q
    |||||||||||||||||||||||| ||||||| ||| || ||||| | ||||||||||||||    
T  6512442 ttttgagttcacaagcaagcttaaacagcaaggaaaacatgaaaagttgaagattttgaaga 6512503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 28112704 - 28112641
Alignment:
Q  230 ttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 293  Q
    ||||||||||||||||||||||||  |||||| ||| || ||||| | ||||||||||||||||    
T  28112704 ttttgagttcacaagcaagcttaaaaagcaaggaaagcatgaaaagttgaagattttgaagaaa 28112641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 12981188 - 12981151
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttt 221  Q
    |||||||||||||||||||||||||||||| |||||||    
T  12981188 tgatgacagtcagtcattcactatttttagagtctttt 12981151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 12991604 - 12991556
Alignment:
Q  234 gagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||| || |||||||| |||||||||| |||||    
T  12991604 gagttcacaagcaagcttaatcaacaagaaaagcaagaaaaattgaaga 12991556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 9314804 - 9314765
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  9314804 tgatgacagtcagtcatacactatttttagagtcttttta 9314765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 21633551 - 21633590
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  21633551 tgatgacagtcagtcatacactatttttagagtcttttta 21633590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 22463515 - 22463554
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  22463515 tgatgacagtcagtcatacactatttttagagtcttttta 22463554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 28116940 - 28116979
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  28116940 tgatgacagtcagtcatacactatttttagagtcttttta 28116979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 9840357 - 9840320
Alignment:
Q  186 atgacagtcagtcattcactatttttagtgtcttttta 223  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  9840357 atgacagccagtcattcactatttttagagtcttttta 9840320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 2378435 - 2378475
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  2378435 tgatgacagtccgtcattcgctatttttagagtctttttat 2378475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 333
Target Start/End: Complemental strand, 13004643 - 13004611
Alignment:
Q  301 cgtgtcacgattgtcgaaaacgtgtcacgattt 333  Q
    |||||||||||||| ||||||||||||||||||    
T  13004643 cgtgtcacgattgttgaaaacgtgtcacgattt 13004611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 15543215 - 15543255
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  15543215 tgatgacagtccgtcattcgctatttttagagtctttttat 15543255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 3e-64; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 35411676 - 35411840
Alignment:
Q  184 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||| |||||| ||  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  35411676 tgatgacagtctgtcatttcaacatttttagagtctttttatgatatttttgagttcacaagcaaacttaagcagcaagaaaacaaagaaaaatagaaga 35411775  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  35411776 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggaacacaggatga 35411840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 6921890 - 6922053
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||| ||||| ||||    
T  6921890 tgatgacagtcagtcattcactatttttagagcctttttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagagaaatataaga 6921988  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6921989 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 6922053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 23299553 - 23299390
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||| ||||||||||    
T  23299553 tgatgacagtcagtcattcactatttttagagtctttttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaaga 23299455  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  23299454 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacaatttggagcacaagatga 23299390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 16185656 - 16185493
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||| |||||||   |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  16185656 tgatgacagtctgtcattccacatttttagagtctttttatgatatttttgagttcacaaacaagcttaagcagcaagaaaagcaagaaaaatataagat 16185557  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||| |||||    
T  16185556 tttgaagaaagcaaaatcgtgtcacgattgttgaaaacatgtcacgttttagagcacaggatga 16185493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 184 - 341
Target Start/End: Original strand, 538015 - 538172
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| |||| |||| ||||||  ||| ||||||||||||||||    
T  538015 tgatgacagtcagtcattcactatttttagagtctttttcatgatatttt-gagttcacaaacaagtttaaacagcaaagaaaacaagaaaaatagaaga 538113  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 341  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  538114 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 538172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 52198305 - 52198468
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||| || |||  ||| ||||||||||||||||    
T  52198305 tgatgacagtcagtcattcactatgtttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaaga 52198403  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  52198404 ttttgaagaaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttagagcacatgatga 52198468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 184 - 341
Target Start/End: Original strand, 10884018 - 10884175
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||| ||||||||||||    
T  10884018 tgatgacagtcagtcattcactatttttagagtctttttcatgatatttt-gagttcacaagcaagtttaaacagcaatgaaaacaaaaaaaatagaaga 10884116  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 341  Q
    ||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  10884117 tttcgaagaaagcaaaatcgtgtcacgattgttgaaaacctgtcacgatttgaagcaca 10884175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 18645741 - 18645578
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||| ||||||||||||| ||||||||||| |||| |||||||||   ||||||||| ||||||||| ||||||  ||| ||||||||||||||||    
T  18645741 tgatgacaatcagtcattcactgtttttagtgtcattttcatgatatttca-agttcacaaacaagcttaaacagcaaagaaaacaagaaaaatagaaga 18645643  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  18645642 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcacaggatga 18645578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 53814971 - 53815062
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53814971 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 53815062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 309
Target Start/End: Complemental strand, 10107614 - 10107489
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||| || |||  ||| ||||||||||||||||    
T  10107614 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacaacaaagaaaacaagaaaaatagaaga 10107516  T
Q  283 ttttgaagaaagcaaaatcgtgtcacg 309  Q
    |||||||||||||||||||||||||||    
T  10107515 ttttgaagaaagcaaaatcgtgtcacg 10107489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 338
Target Start/End: Complemental strand, 29344773 - 29344618
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttt-ttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  29344773 tgatgacagtcagtcattcactatttttagagtctttcttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaattgaaga 29344674  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcg-aaaacgtgtcacgatttggagc 338  Q
       |||| ||||    |||||||||||||| | | |||||||| |||||||||||||    
T  29344673 aactgaaaaaag-gggatcgtgtcacgattattgaaaaacgtgacacgatttggagc 29344618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 294
Target Start/End: Original strand, 3839790 - 3839903
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt---atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaa 280  Q
    |||||||||||||||||||||||||||||| || |||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||    
T  3839790 tgatgacagtcagtcattcactatttttagagtttttttttaatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaaccgaa 3839889  T
Q  281 gattttgaagaaag 294  Q
    ||  ||||||||||    
T  3839890 gaaattgaagaaag 3839903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 16243166 - 16243257
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  16243166 tgatgacaatcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaa 16243257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 9380012 - 9380102
Alignment:
Q  185 gatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  9380012 gatgacagtcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcaataagaaaagcaagaaaaa 9380102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 54460367 - 54460457
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaa 274  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||    
T  54460367 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaatcttaagcaacaagaaaagaaagaaaa 54460457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 34984758 - 34984668
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaa 274  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  34984758 tgatgacagtcagtcattcgttatttttagagtctttttatgatatttttgagttcacaagcaagattaagcaacaagaaaagcaagaaaa 34984668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 19302364 - 19302255
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    |||||| |||| ||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||| | |||||||||||||||    
T  19302364 tgatgatagtccgtcatttcatatttttagagtctttttatgatatttttgagttcacaagcaagcttaaacaacaaggaaagcgagaaaaatagaagat 19302265  T
Q  284 tttgaagaaa 293  Q
    ||||||||||    
T  19302264 tttgaagaaa 19302255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 10880776 - 10880863
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaaga 271  Q
    |||||||||||||| |||  |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  10880776 tgatgacagtcagttatttgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaaga 10880863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 41976321 - 41976412
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||| |||||||||| || ||||||| ||||||||||||||||||||||| |||| ||||||||||| ||| |||||    
T  41976321 tgatgacagtcagtcattcgctatttttagagtgtttttataatatttttgagttcacaagcaagattaaacagcaagaaaagcaacaaaaa 41976412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 275
Target Start/End: Complemental strand, 54736842 - 54736759
Alignment:
Q  192 gtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| |||||    
T  54736842 gtcaatcattcactatttttagagtctttttatgatacttttgagttcacaagcaagcttaagcaacaagaaaagcaaaaaaaa 54736759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 20729477 - 20729395
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    ||||||||||||||||||| |||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  20729477 tgatgacagtcagtcattcgctatttttagagttttttttatgatattttttagttcacaagcaagcttaagcagcaagaaaa 20729395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 43808881 - 43808970
Alignment:
Q  187 tgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaat 276  Q
    ||||||| ||| ||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  43808881 tgacagttagttattcgttatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaaaaaaaat 43808970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 31548573 - 31548649
Alignment:
Q  206 atttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| |||||    
T  31548573 atttttagagtctttttatgatatttttgagttcacaaccaagcttaagcagtaagaaaagcaagaaaaattgaaga 31548649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 17532669 - 17532565
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||| ||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||| || |||  ||| ||||||||| ||||||    
T  17532669 tgattacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacaacaaagaaaacaagaaaaaaagaaga 17532571  T
Q  283 ttttga 288  Q
    ||||||    
T  17532570 ttttga 17532565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 19305526 - 19305445
Alignment:
Q  205 tatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 286  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||| ||| | ||||||||||||| ||||    
T  19305526 tatttttagagtctttttataatatttttgagttcacaagcaagcttaaacagcaaggaaagcgagaaaaatagaagttttt 19305445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 206 - 347
Target Start/End: Complemental strand, 22994570 - 22994429
Alignment:
Q  206 atttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgt 305  Q
    |||||||||||  | |||||||||||| |||| ||||||||||||||| ||||||| ||| |||||||||  ||||||| ||  |||||  |||| |||     
T  22994570 atttttagtgtaatattatgatatttt-gagtccacaagcaagcttaaacagcaaggaaagcaagaaaaactgaagattgtggtgaaagtgaaatagtga 22994472  T
Q  306 cacgattgtcg-aaaacgtgtcacgatttggagcacatgatga 347  Q
    |||| |||| | |||||||||||||||||||||||||| ||||    
T  22994471 cacggttgttgaaaaacgtgtcacgatttggagcacataatga 22994429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 55032833 - 55032789
Alignment:
Q  268 aagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgatt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  55032833 aagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgatt 55032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 347
Target Start/End: Original strand, 9380143 - 9380194
Alignment:
Q  296 aaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||| |||||    
T  9380143 aaaatcgtgtcacggttgttgaaaacgtgtcacgatttagagcacaggatga 9380194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 31857055 - 31857091
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttt 220  Q
    |||||||||||||||||||||||||||||| ||||||    
T  31857055 tgatgacagtcagtcattcactatttttagagtcttt 31857091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 50462455 - 50462415
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  50462455 tgatgacagtccgtcattcactatttttagagtctttttat 50462415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 9157508 - 9157547
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  9157508 tgatgacagtcagtcatgcactatttttagagtcttttta 9157547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 2280779 - 2280741
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt 222  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  2280779 tgatgacagtcagtcatgcactatttttagagtcttttt 2280741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 42355336 - 42355298
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt 222  Q
    |||||||||||||||||||||||||||||| || |||||    
T  42355336 tgatgacagtcagtcattcactatttttagagttttttt 42355298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 43926124 - 43926164
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  43926124 tgatgacagtccgtcattcgctatttttagagtctttttat 43926164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 8276012 - 8276175
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||| |||||||  ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  8276012 tgatgacagtctgtcattccatatttttagagtctttttatgatatttttgagttcacaagcaagctcaagcagcaagaaaagcaagaaaaatagaagat 8276111  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||| ||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  8276112 tttgaagaaaacaaaatcgtgtcatgattgttgaaaacgtatcacgatttggagcacatgatga 8276175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 26556510 - 26556673
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| || |||  ||| ||||||||||||||||    
T  26556510 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaaga 26556608  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  26556609 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcacatgatga 26556673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 10431386 - 10431549
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||| ||||    
T  10431386 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga 10431484  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||||    
T  10431485 ttttgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttagagcacaggatga 10431549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 339
Target Start/End: Original strand, 4542074 - 4542229
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||||||||    
T  4542074 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaaga 4542172  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 339  Q
    |||||| ||||||||| | ||||||||||||| ||||| |||||| |||||||||||    
T  4542173 ttttgaggaaagcaaatttgtgtcacgattgttgaaaatgtgtcatgatttggagca 4542229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 184 - 339
Target Start/End: Complemental strand, 2442277 - 2442122
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||||||||    
T  2442277 tgatgacagtcagtcattcactattttaagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaaga 2442179  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 339  Q
    || ||| ||||||||| ||||||||||||||| |||||||| |||||||||| ||||    
T  2442178 ttctgaggaaagcaaattcgtgtcacgattgttgaaaacgtatcacgatttgaagca 2442122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 45288138 - 45288047
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45288138 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 45288047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 45291474 - 45291383
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45291474 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 45291383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 20081640 - 20081530
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||     
T  20081640 tgatgacagtcagtcattcactatttttagagtgtttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatcaaagaa 20081541  T
Q  284 tttgaagaaag 294  Q
     ||||||||||    
T  20081540 attgaagaaag 20081530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 17729973 - 17730071
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  17729973 tgatgacagtcagtctttcactatttttagagtccttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatcgaaga 17730071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 9865642 - 9865551
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  9865642 tgatgacagtcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaa 9865551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 9080376 - 9080467
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||| ||||||||  ||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9080376 tgatgacagttagtcattcgttatttttagagtctttttatgtaatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 9080467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 10344616 - 10344707
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||| |||||| |||| |||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  10344616 tgatgactgtcagtaattcgctatttttagagtcttcttatgaaatttttgagttcacaagcaagcttaagcagcaagaaaagcaaaaaaaa 10344707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 4596924 - 4596833
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||| ||||||  ||||||||| |||||||||||||||||||||| ||||||| ||| ||||||| |||||||| |||||||||    
T  4596924 tgatgacagtcaatcattcgttatttttagagtctttttatgatatttttgagctcacaagaaagattaagcaacaagaaaagcaagaaaaa 4596833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 4694723 - 4694814
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||| |||||||||||   ||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  4694723 tgatgaaagtcagtcatttgttatttttagagtctttctatgatatttttgagttcacaagcaagattaagcagcaagaaaagtaagaaaaa 4694814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 337
Target Start/End: Complemental strand, 9274003 - 9273882
Alignment:
Q  215 gtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgt 314  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||| | |||||   |||||||||   |||| ||||||||||      
T  9274003 gtctttttatgatattttggagttcacaagcaagcttaagcaccaagaaaagaaagaaaagttgaagaaactgaagaaag-ggaatcatgtcacgattac 9273905  T
Q  315 cgaaaacgtgtcacgatttggag 337  Q
     ||||||||||||||||||||||    
T  9273904 tgaaaacgtgtcacgatttggag 9273882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 16164889 - 16164998
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||  ||||||||||||  |||| ||||| |||| |||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  16164889 tgatgacagtcagtcattcgttatttttagtgtaattttcatgatgtttt-gagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 16164987  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  16164988 ttttgaagaaa 16164998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 48644616 - 48644725
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||  ||||||||||||| |||| || || |||| |||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  48644616 tgatgacagtcagtcattctttatttttagtgtcattttcataatgtttt-gagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 48644714  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  48644715 ttttgaagaaa 48644725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 6602621 - 6602730
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||  ||||||||||||| | || || || ||||  ||||||||||||||||||| || |||| |||  | |||||||| ||||    
T  6602621 tgatgacagtcagtcattcgttatttttagtgtcatgttcataatgtttta-agttcacaagcaagcttaaacaacaaggaaagtatgaaaaatacaaga 6602719  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  6602720 ttttgaagaaa 6602730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 48645921 - 48645852
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtc-tttttatgatatttttgagttcacaagcaagcttaa 253  Q
    |||||||||||||||||||  ||||||||||||| |||| |||||  ||||||||||||||||||||||||    
T  48645921 tgatgacagtcagtcattctttatttttagtgtcattttcatgat-gttttgagttcacaagcaagcttaa 48645852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 37167070 - 37167030
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  37167070 tgatgacagtcagtcattcgctatttttagagtctttttat 37167030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 11826430 - 11826392
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt 222  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  11826430 tgatgacagtcagtcatgcactatttttagagtcttttt 11826392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 18563396 - 18563366
Alignment:
Q  235 agttcacaagcaagcttaagcagcaagaaaa 265  Q
    |||||||||||||||||||||||||||||||    
T  18563396 agttcacaagcaagcttaagcagcaagaaaa 18563366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 13450765 - 13450736
Alignment:
Q  184 tgatgacagtcagtcattcactatttttag 213  Q
    ||||||||||||||||||||||||||||||    
T  13450765 tgatgacagtcagtcattcactatttttag 13450736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 6e-62; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 43490793 - 43490956
Alignment:
Q  184 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  43490793 tgatgacagtctgtcatttcac-atttttagagtctttttatgatatttttgagttcacaaacaagcttaagcagcaagaaaagcaagaaaaatagaaga 43490891  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||    
T  43490892 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgattaggagcacaggatga 43490956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 42061486 - 42061649
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||  ||| ||||||||||||||||    
T  42061486 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacagcaaagaaaacaagaaaaatagaaga 42061584  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  42061585 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcacatgatga 42061649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 22938055 - 22937892
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||| |||||||    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22938055 tgatgacagtctgtcattccacgtttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagat 22937956  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||||||||||||| |||| |||| |||||||| ||||||||||||||||| |||||    
T  22937955 tttgaagaaagcaaaatcgtgccacggttgttgaaaacgtatcacgatttggagcacaagatga 22937892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 184 - 339
Target Start/End: Original strand, 32837083 - 32837238
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||  |||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  32837083 tgatgacagtatgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagaaagaaaaatagaagat 32837182  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 339  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  32837183 tttgaagaaagcaaaatcgtgtcatgattgttgaaaacgtgtcacgatttggagca 32837238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 37214766 - 37214929
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    |||| |||||| |||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37214766 tgataacagtctgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagat 37214865  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||| |||| ||||| |||||| ||||||||||||||||||| |||||    
T  37214866 tttgaagaaagcaaaatcgtatcacaattgttgaaaacatgtcacgatttggagcacaggatga 37214929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 28442181 - 28442018
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||| ||||    
T  28442181 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga 28442083  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| |||||    
T  28442082 ttttgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttagagcacaggatga 28442018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 31862872 - 31863035
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||  ||||||||||||| |||| || ||||||| |||||||||||||||||||| || |||  ||| |||||||||||||| |    
T  31862872 tgatgacagtcagtcattccttatttttagtgtcattttcataatatttt-gagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaaaa 31862970  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  31862971 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcacatgatga 31863035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 14376834 - 14376706
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  14376834 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacaacaaagaaatcaagaaaaatagaaga 14376736  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgatt 312  Q
    |||||| ||||||||| |||||||||||||    
T  14376735 ttttgaggaaagcaaattcgtgtcacgatt 14376706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 28788401 - 28788309
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaat 276  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  28788401 tgatgacagtcagtcatttgctatttttagagtctttttatgatattttttagttcacaagcaagcttaagcagcaagaaaaacaagaaaaat 28788309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 14017036 - 14016927
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  14017036 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 14016937  T
Q  284 tttgaagaaa 293  Q
    ||||||||||    
T  14016936 tttgaagaaa 14016927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 21336742 - 21336650
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  21336742 tgatgacagtcagtcattcactatttttagagtcttttttattatatttttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaa 21336650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 21828041 - 21827949
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  21828041 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcgcaagcaagcttaagcagcaagaaaagcaagaaaaa 21827949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 17747617 - 17747726
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| ||||||||||| ||| |||||||| || |||| ||| || |||||||| |||||    
T  17747617 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcataagaaagcttaaacaacaaggaaagcatgaaaaatacaagat 17747716  T
Q  284 tttgaagaaa 293  Q
    ||||||||||    
T  17747717 tttgaagaaa 17747726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 39191333 - 39191422
Alignment:
Q  186 atgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||| |||||   ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  39191333 atgacagtcaatcatttgttatttttagagtctttttatgatacttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 39191422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 40916889 - 40916795
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt---atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||  |||||||||| ||||||||   || ||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  40916889 tgatgacagtcagtcatttgctatttttagagtcttttttttatcatatttttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaa 40916795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 18031710 - 18031801
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||| |||| |||||||  ||||||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||    
T  18031710 tgatgatagtccgtcattccatatttttagagtctttttatgatattttcgagttcaaaagcaagtttaagcagcaagaaaagcaagaaaaa 18031801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 338
Target Start/End: Complemental strand, 4100431 - 4100278
Alignment:
Q  189 acagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttga 288  Q
    ||||||||| |||| ||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| ||||  |||||   |||    
T  4100431 acagtcagttattcgctatttt-agagtctttttatgatatttttgagttcacaggcaagattaagcagcaagaaaagcaaggaaaactgaagaaactga 4100333  T
Q  289 agaaagcaaa----atcgtgtcacgatt-gtcgaaaacgtgtcacgatttggagc 338  Q
    |||||  |||    ||||||||||||||  || |||||||| |||||||||||||    
T  4100332 agaaaaaaaaagggatcgtgtcacgattactcaaaaacgtgacacgatttggagc 4100278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 7270241 - 7270305
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaag 248  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  7270241 tgatgacagtctgtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaag 7270305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 2836702 - 2836761
Alignment:
Q  206 atttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2836702 atttttagagtctttttatgatatttttgagttcacaagcaaacttaagcagcaagaaaa 2836761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 30065562 - 30065643
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    |||||||| ||| ||||||  ||||||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  30065562 tgatgacaatcattcattcgttatttttagagtctttttatgatatttttgaattcacaagcaagattaagcaacaagaaaa 30065643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 275
Target Start/End: Complemental strand, 2837641 - 2837584
Alignment:
Q  218 tttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  2837641 tttttatgatattttggagttcacaagcaagcttaagcagcaataaaagcaagaaaaa 2837584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 25329456 - 25329505
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatattttt 233  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  25329456 tgatgacagtcagtcattcgctatttttagagtttttttatgatattttt 25329505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 7624303 - 7624366
Alignment:
Q  230 ttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 293  Q
    ||||||||||||| |||||||||| || |||| ||| || |||||||| |||||||||||||||    
T  7624303 ttttgagttcacaggcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 7624366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 41307445 - 41307405
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  41307445 tgatgacagtcagtcattcgctatttttagagtctttttat 41307405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 21336609 - 21336558
Alignment:
Q  296 aaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||| |||| |||||| ||||||||||| ||||||| |||||    
T  21336609 aaaatcgtgtcacggttgttgaaaacatgtcacgatttagagcacaggatga 21336558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 33551385 - 33551425
Alignment:
Q  235 agttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||| ||| |||||||||||||||| |||||||||    
T  33551385 agttcacaagtaagtttaagcagcaagaaaagcaagaaaaa 33551425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 15431164 - 15431327
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||| ||||||||||    
T  15431164 tgatgacagtcagtcattcactatttttagagtctttttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaaga 15431262  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15431263 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacaggatga 15431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 15437778 - 15437941
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||| ||||||||||    
T  15437778 tgatgacagtcagtcattcactatttttagagtctttttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaaga 15437876  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15437877 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacaggatga 15437941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 18910604 - 18910767
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||| ||||| || |||  ||| ||||||||||||||||    
T  18910604 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaaacttaaacaacaaagaaagcaagaaaaatagaaga 18910702  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  18910703 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcacatgatga 18910767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 184 - 341
Target Start/End: Complemental strand, 33410962 - 33410805
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  33410962 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaaga 33410864  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 341  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  33410863 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgttacgatttgaagcaca 33410805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 336
Target Start/End: Complemental strand, 3798796 - 3798644
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| ||||||  ||| ||||||||||||||||    
T  3798796 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaaagaaagcaagaaaaatagaaga 3798698  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttgga 336  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  3798697 ttttgaagaaagcaaaatcttgtcacgattgttgaaaatgtgtcacgatttgga 3798644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 184 - 334
Target Start/End: Original strand, 5669628 - 5669778
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  5669628 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaaga 5669726  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttg 334  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  5669727 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacaatttg 5669778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 5721971 - 5721808
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||| ||||||||||||| ||||||||||| |||| |||||||||   ||||||||| ||||||||| ||||||  ||| ||||||||||||||||    
T  5721971 tgatgacaatcagtcattcactgtttttagtgtcattttcatgatatttca-agttcacaaacaagcttaaacagcaaagaaaacaagaaaaatagaaga 5721873  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  5721872 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcacaggatga 5721808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 19865643 - 19865480
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||| || |||  ||| ||||||||||||||||    
T  19865643 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaaga 19865545  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||| |||||||||||||||||| | ||||| || ||||||||||||||||| |||||    
T  19865544 ttttgaagaaaacaaaatcgtgtcacgattattgaaaatgtatcacgatttggagcacaggatga 19865480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 184 - 339
Target Start/End: Original strand, 5680469 - 5680624
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||| | |||||||   |||||||| |||||||||||||||||||||||||| |||||||||||| || |||||||| |||||||||||||||||    
T  5680469 tgatgacagactgtcattccacatttttagagtctttttatgatatttttgagttcataagcaagcttaaacaacaagaaaagcaagaaaaatagaagat 5680568  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 339  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||| |||| |||||    
T  5680569 tttgaaaaaagcaaaatcatgtcacgattgttgaaaacgtgtcacaatttagagca 5680624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 9716951 - 9717114
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  9716951 tgatgacagtcggtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaaga 9717049  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||| |||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||| |||||    
T  9717050 tttcgaagaaagcaaaatcgtgtcacgattgttgaaaacgtggcacaatttagagcacaggatga 9717114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 184 - 302
Target Start/End: Original strand, 14571026 - 14571144
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||| ||| |||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14571026 tgatgacggtctgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagat 14571125  T
Q  284 tttgaagaaagcaaaatcg 302  Q
    |||||||||||||||||||    
T  14571126 tttgaagaaagcaaaatcg 14571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 185 - 347
Target Start/End: Complemental strand, 19861286 - 19861124
Alignment:
Q  185 gatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    |||| ||| |||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||  ||| ||||||||||| |||||    
T  19861286 gatggcagacagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacagcaaagaaagcaagaaaaatataagat 19861188  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||  |||||| ||||||||||||| |||||||| ||||||||||||||||| |||||    
T  19861187 tttgaagaacacaaaattgtgtcacgattgttgaaaacgtatcacgatttggagcacaggatga 19861124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 12237354 - 12237503
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||| ||||| ||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||| || |||  ||| ||||| ||||||||||    
T  12237354 tgatgatagtcattcattcactgtttttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacaacaaagaaagcaagagaaatagaaga 12237452  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgattt 333  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12237453 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaatgtgtcacaattt 12237503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 184 - 334
Target Start/End: Original strand, 49269735 - 49269885
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||||||||||    |||||||| || |||||||||||||||||||||  ||| ||||||||| | ||||  ||| |||||||||||||||||    
T  49269735 tgatgacagtcagtcattttacatttttagagtttttttatgatatttttgagttagcaaacaagcttaaacggcaaagaaagcaagaaaaatagaagat 49269834  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttg 334  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  49269835 tttgaagaaagcaaaatcgtatcacgattgttgaaaacgtgtcacgatttg 49269885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 234 - 347
Target Start/End: Complemental strand, 40617762 - 40617649
Alignment:
Q  234 gagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgattt 333  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  40617762 gagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagattttgaagaaggcaaaatcgtgccacgattgttgaaaacgtgtcacgattt 40617663  T
Q  334 ggagcacatgatga 347  Q
     || |||| |||||    
T  40617662 agaacacaagatga 40617649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 312
Target Start/End: Complemental strand, 37104241 - 37104113
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||| ||||||||||||| | |||||| || |||| |||||||||| |||||||||||||||||||| ||||||  ||| ||||||||||||||||    
T  37104241 tgatgacactcagtcattcactgtgtttagtatcattttcatgatatttt-gagttcacaagcaagcttaaacagcaaagaaaacaagaaaaatagaaga 37104143  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgatt 312  Q
    ||||||||||||||||||||||||||||||    
T  37104142 ttttgaagaaagcaaaatcgtgtcacgatt 37104113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 18449136 - 18449231
Alignment:
Q  24 acatcatcatcaacaaattatcacatcattcttagaactacaacatcatctcaatagcactaacatcattaagtaaagatatccaagcacacgact 119  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  18449136 acatcatcatcaacaaatcatcacatcattcttacaactacaacatcatctcaagtgcactaacatcatcaagtaaagatatccaagcacacgact 18449231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 192 - 275
Target Start/End: Original strand, 21418987 - 21419070
Alignment:
Q  192 gtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21418987 gtcagtcattcgctatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 21419070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 230 - 347
Target Start/End: Original strand, 53093767 - 53093884
Alignment:
Q  230 ttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacg 329  Q
    |||||||||||||||||||||||| ||||||| ||| || ||||| | ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  53093767 ttttgagttcacaagcaagcttaaacagcaaggaaagcatgaaaagttgaagattttgaagaaagtaaaatcgtgacacgattgttgaaaacgtgtcacg 53093866  T
Q  330 atttggagcacatgatga 347  Q
    | |||||||||| |||||    
T  53093867 aattggagcacaggatga 53093884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 3718336 - 3718427
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  3718336 tgatgacagtcactcattcactatttttagagtatttttatgatatttttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaa 3718427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 12782106 - 12782197
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  12782106 tgatgacagtcagtcattcgctatttttagagtcattttatgatatttttgagtttacaagcaagcttaagcagcaagaaaagcaagaaaaa 12782197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 192 - 275
Target Start/End: Original strand, 40794200 - 40794283
Alignment:
Q  192 gtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40794200 gtcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 40794283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 29323979 - 29324088
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  29323979 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 29324078  T
Q  284 tttgaagaaa 293  Q
    ||||||||||    
T  29324079 tttgaagaaa 29324088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 44809904 - 44809795
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  44809904 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 44809805  T
Q  284 tttgaagaaa 293  Q
    ||||||||||    
T  44809804 tttgaagaaa 44809795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 272
Target Start/End: Original strand, 44164001 - 44164090
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttt-tatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaa 272  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  44164001 tgatgacagtcagtcattcactatttttaaagtcttttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaa 44164090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 52007431 - 52007350
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  52007431 tgatgacagtcagtcattcgctatttttagagtctttttatgatattgttgagttcaaaagcaagcttaagcagcaagaaaa 52007350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 15430766 - 15430674
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||  |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15430766 tgatgacagtcagtcattcgttattttcagagtcttttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 15430674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 15437380 - 15437288
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||  |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15437380 tgatgacagtcagtcattcgttattttcagagtcttttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 15437288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 27013229 - 27013321
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttt-tatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  27013229 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcacaggcaagcttaagcaacaagaaaagcaagaaaaa 27013321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 53010458 - 53010377
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  53010458 tgatgatagtcagtcattcattatttttagagtctttttatgatatttttgagttcacaagtaagattaagcagcaagaaaa 53010377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 27677966 - 27677874
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||| |||||    
T  27677966 tgatgacagtcagttattcactatttttagagtcttttttatgatatttttgagttcacaatcaagattaagcagcaagaaaagcaaaaaaaa 27677874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 24045057 - 24044966
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||| |||| ||||    
T  24045057 tgatgacagtcagtcattcgttatttttagagtctttttttgatatttttgagttcacaaacaagattaagcagcaagaaaagcaaggaaaa 24044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 290
Target Start/End: Complemental strand, 34320839 - 34320738
Alignment:
Q  189 acagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttga 288  Q
    |||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||| ||  ||| ||| || |||||||| ||||||||||    
T  34320839 acagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaataaggaaagcatgaaaaatacaagattttga 34320740  T
Q  289 ag 290  Q
    ||    
T  34320739 ag 34320738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 56198029 - 56198137
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||||| || |||| ||| || |||||||||||||    
T  56198029 tgatgacagtcagtcattcgttatttttagtgtcattttcatgatgtttt-gagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaaga 56198127  T
Q  283 ttttgaagaa 292  Q
    ||||||||||    
T  56198128 ttttgaagaa 56198137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 19826701 - 19826793
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgata-tttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||| ||| ||||||| |||||||| |||||||||    
T  19826701 tgatgacagtcagtcattcgctatttttagagtctttttatgaaattttttgagttcacaagtaagattaagcaacaagaaaagcaagaaaaa 19826793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 27692025 - 27691933
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||| | ||||||||||||||||||| |||||||| | ||||||||||| |||||||||||| |||||||||||||||| |||||||||    
T  27692025 tgatgacaattagtcattcactatttttagagtcttttttacgatatttttgaattcacaagcaagattaagcagcaagaaaagcaagaaaaa 27691933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 19819950 - 19820032
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgata-tttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    ||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  19819950 tgatgacagtcagtcattcgctatttttaaagtctttttatgatattttttgagttcacaagcaagattaagtagcaagaaaa 19820032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 56194722 - 56194831
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||| ||||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||||| || |||| ||| || |||||||||||||    
T  56194722 tgatgacagtcaatcattcgttatttttagtgtcattttcatgatgtttt-gagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaaga 56194820  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  56194821 ttttgaagaaa 56194831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 35509201 - 35509280
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    |||| ||||||||||||||  ||||||||||  |||| ||||||||||||||||||||||||||| ||||||| ||||||||    
T  35509201 tgataacagtcagtcattcgttatttttagt--ctttatatgatatttttgagttcacaagcaagattaagcaacaagaaaa 35509280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 47114776 - 47114885
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||  ||||||||||||| |||| || || |||| |||||||||||||||||||| ||  ||| ||| || |||||||| ||||    
T  47114776 tgatgacagtcagtcattctttatttttagtgtcattttcattatgtttt-gagttcacaagcaagcttaaacaataaggaaaacatgaaaaatacaaga 47114874  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  47114875 ttttgaagaaa 47114885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 15405898 - 15405793
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||| ||||||||||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||||| || |||| ||  || |||||||| ||||    
T  15405898 tgatgaaagtcagtcattctttatttttagtgtcattttcatgatgtttt-gagttcacaagcaagcttaaacaacaaggaacgcatgaaaaatacaaga 15405800  T
Q  283 ttttgaa 289  Q
    |||||||    
T  15405799 ttttgaa 15405793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 33926121 - 33926230
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtc-tttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||||||||||   || |||||||||| |||  |||||  | |||||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  33926121 tgatgacagtcagtcatttgttacttttagtgtcatttgcatgat-gtcttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 33926219  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  33926220 ttttgaagaaa 33926230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 15813036 - 15812973
Alignment:
Q  230 ttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 293  Q
    ||||||||||||||||||| |||| || |||| ||| || |||||||| |||||||||||||||    
T  15813036 ttttgagttcacaagcaagtttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 15812973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 37741512 - 37741471
Alignment:
Q  234 gagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  37741512 gagttcacaagcaagcttaaacagcaagaaaaacaagaaaaa 37741471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 38284415 - 38284375
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  38284415 tgatgacagtcagtcattcgctatttttagagtctttttat 38284375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 17669447 - 17669475
Alignment:
Q  184 tgatgacagtcagtcattcactattttta 212  Q
    |||||||||||||||||||||||||||||    
T  17669447 tgatgacagtcagtcattcactattttta 17669475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 34018699 - 34018659
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  34018699 tgatgacagtccgtcattcgctatttttagagtctttttat 34018659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 48416448 - 48416408
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  48416448 tgatgacagtccgtcattcgctatttttagagtctttttat 48416408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 6e-59; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 45156918 - 45156755
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||   ||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  45156918 tgatgacagtttatcattctatatttttagagtctttttatgatatttttgagttcacaagcaagctttagcagcaagaaaagcaagaaaaatagaagat 45156819  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  45156818 tttgaagaaagcacaatcgtgtcacgattgttgaaaatgtgtcacgatttggagcacaggatga 45156755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 14420864 - 14421027
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    |||||||||||  ||||||   |||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  14420864 tgatgacagtctctcattccacatttttagagtctttttatgatattttttagttcacaagcaagcttaagcaacaagaaaagcaagaaaaatataagat 14420963  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| |||||    
T  14420964 tttgaagaaagcaaaatcgtatcacgattgttgaaaacgtgtcacgatttggaacacaggatga 14421027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 5540995 - 5540832
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||  |||||||   |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  5540995 tgatgacagtttgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcataagcagcaagacaagtaagaaaaatagaagat 5540896  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||| |||||||||| |||||||||||| ||||||||||||||||||| |||||| |||||    
T  5540895 tttgaaggaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttgaagcacaggatga 5540832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 10663011 - 10663174
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| || |||||||||||||||  ||| ||||||  ||| ||||||||||||||||    
T  10663011 tgatgacagtcagtcattcactatttttagagtctttttcatgatatgtt-gagttcacaagcaagtctaaacagcaaagaaagcaagaaaaatagaaga 10663109  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||    
T  10663110 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacatgtcatgatttggagcacataatga 10663174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 184 - 341
Target Start/End: Complemental strand, 18722310 - 18722152
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||| |||||||||| || |||  ||| ||||||||||||||||    
T  18722310 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaaga 18722212  T
Q  283 tttt-gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 341  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18722211 tttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 18722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 184 - 333
Target Start/End: Complemental strand, 33878238 - 33878089
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| ||| |||| ||||||  ||| ||||||||||||||||    
T  33878238 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagaaagtttaaacagcaaagaaaacaagaaaaatagaaga 33878140  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgattt 333  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  33878139 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacaattt 33878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 188 - 347
Target Start/End: Complemental strand, 25595681 - 25595521
Alignment:
Q  188 gacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 286  Q
    |||||||||||||||| | ||||||||||| |||| |||||||||| ||||||||| |||||||||| || |||  ||| ||||||||||||||||||||    
T  25595681 gacagtcagtcattcattgtttttagtgtcattttcatgatatttt-gagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 25595583  T
Q  287 -gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25595582 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcacatgatga 25595521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 219 - 347
Target Start/End: Original strand, 25228049 - 25228175
Alignment:
Q  219 ttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgtcgaa 318  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||  |||    
T  25228049 ttttatgatatttttgagttcacaagcaagctcaagaagcaagaaaaacaagaaaaatagaagattttgaagaaa--aaaatcgtgtctcgattgctgaa 25228146  T
Q  319 aacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||||||||||||||||    
T  25228147 aacgtgtcacgatttggagcacatgatga 25228175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 188 - 347
Target Start/End: Complemental strand, 25592496 - 25592336
Alignment:
Q  188 gacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 286  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||| |||||||||| || |||  ||| ||||||||||||||||||||    
T  25592496 gacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 25592398  T
Q  287 -gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
     |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  25592397 tgaagaaagcaaaatcgtgtcacgattgttgaaaatgtgtcccgatttggagcacatgatga 25592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 43682798 - 43682634
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt--atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaag 281  Q
    ||||| ||||||||||||||||||||||||| || ||||  |||||||||| ||||||| ||||||| |||| ||||||  ||| |||||||||||||||    
T  43682798 tgatggcagtcagtcattcactatttttagtatcatttttcatgatatttt-gagttcataagcaagtttaaacagcaaagaaagcaagaaaaatagaag 43682700  T
Q  282 attttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |||| |||||    
T  43682699 attttgaagaaagcaaaatcgtgtcacgattattgaaaacgtgtcacaatttggaacacaggatga 43682634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 18826834 - 18826725
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||| ||||| || |||| ||| || |||||||| |||||    
T  18826834 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaaacttaaacaacaaggaaagcatgaaaaatacaagat 18826735  T
Q  284 tttgaagaaa 293  Q
    ||||||||||    
T  18826734 tttgaagaaa 18826725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 338
Target Start/End: Original strand, 12582218 - 12582372
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    |||||| | ||| |||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||  |||||     
T  12582218 tgatgaaaatcaatcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagaaagaaaagcaagaaaaactgaagaa 12582317  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcg-aaaacgtgtcacgatttggagc 338  Q
      |||| ||||    |||||||||||||| | | ||||||||||||||||||||||    
T  12582318 actgaaaaaag-gggatcgtgtcacgattattgaaaaacgtgtcacgatttggagc 12582372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 15662749 - 15662654
Alignment:
Q  24 acatcatcatcaacaaattatcacatcattcttagaactacaacatcatctcaatagcactaacatcattaagtaaagatatccaagcacacgact 119  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||| |||| ||  |||||| |||||| ||||||| ||||||||||||||||||    
T  15662749 acatcatcatcaataaatcatcacatcattcttacaactacaacattatctaaagtgcactagcatcatcaagtaaatatatccaagcacacgact 15662654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 22174891 - 22174782
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||||| |||||| |||||| |||||| |||| ||||| ||||||||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  22174891 tgatgacagtcagccattcattatttt-agtgtcattttcatgatgtttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 22174793  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  22174792 ttttgaagaaa 22174782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 30640505 - 30640598
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttt--tatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||| |||||||||||||| ||  ||||||  ||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  30640505 tgatgacagtcaatcattcactattttaagaatctttttttatgatacttttgagttcacaagcaagcttaagcagcaagaaatgcaagaaaaa 30640598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 14589816 - 14589707
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||| ||| ||||||||| ||||||||||||| |||| ||||| |||| |||||||||||||||||||  || |||| ||| || |||||||| ||||    
T  14589816 tgatgatagttagtcattcattatttttagtgtcattttcatgatgtttt-gagttcacaagcaagcttacacaacaaggaaagcatgaaaaatacaaga 14589718  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  14589717 ttttgaagaaa 14589707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 19792926 - 19793019
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttt-tatgatatttttgagttcacaagc-aagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||| ||| |||| || |||||||| | |||||||    
T  19792926 tgatgacagtcggccattcactatttttagagtcttttttatgatatttttgagttcacaagcaaagattaaacaacaagaaaagctagaaaaa 19793019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 23612569 - 23612645
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtc-tttttatgatatttttgagttcacaagcaagcttaagcagcaa 260  Q
    |||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||| |||| ||||||    
T  23612569 tgatgacagtcagtcattcactatttttagtgtcattttgatgaga-ttttgagttcacaagcaagtttaaacagcaa 23612645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 5981220 - 5981150
Alignment:
Q  184 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaag 254  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  5981220 tgatgacagtccgtcatttcac-atttttagagtctttttatgatatttttgagttcacaagcaagtttaag 5981150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 38249312 - 38249248
Alignment:
Q  230 ttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaag 294  Q
    |||||| ||||||||||||||||| ||||||| ||| || ||||| |  ||||||||||||||||    
T  38249312 ttttgaattcacaagcaagcttaaacagcaaggaaaacatgaaaagttaaagattttgaagaaag 38249248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 20261647 - 20261686
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  20261647 tgatgacagtcagtcatacactatttttagagtcttttta 20261686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 21048277 - 21048316
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  21048277 tgatgacagtcagtcatacactatttttagagtcttttta 21048316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 16952998 - 16953038
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  16952998 tgatgacagtccgtcattcgctatttttagagtctttttat 16953038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 347
Target Start/End: Original strand, 30640624 - 30640672
Alignment:
Q  299 atcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||||||| |||||||||||||  |||||| |||| |||||    
T  30640624 atcgtgtcacgattgttgaaaacgtgtcacactttggatcacaagatga 30640672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 4e-54; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 29644308 - 29644145
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||| |||||||   |||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||     
T  29644308 tgatgacagtctgtcattccacatttatagagtctttttatgatatttttgagttcacaagcaaacttaagcagcaaaaaaagcaagaaaaatagaagac 29644209  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  29644208 tttgaagaaagtaaaatcgtgtcacgattgttgaaaacgtatcacgatttggagcacaggatga 29644145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 2793299 - 2793462
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta-tgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||| ||| ||  ||| ||||||||||||||||    
T  2793299 tgatgacagtcagtcgttcactatttttagagtctttttaatgatatttt-gagttcacaagcaagtttaaacagtaaagaaaacaagaaaaatagaaga 2793397  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  2793398 tttcgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcacaggatga 2793462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 49499568 - 49499405
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||||||||||| || ||||||||||  |||| |||||||||| ||||||||| |||||||||| || |||  ||| ||||||||||||||||    
T  49499568 tgatgacagtcagtcattcgctgtttttagtgttattttcatgatatttt-gagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaaga 49499470  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||    
T  49499469 ttttgaagaaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttggagcatatgatga 49499405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 339
Target Start/End: Complemental strand, 1951345 - 1951190
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||||||||||||||||||| ||| || |||| ||||||| || ||||||||||||||| |||| ||||||  ||| ||||||||||||||||    
T  1951345 tgatgacagtcagtcattcactattttaagtatcattttcatgatatctt-gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaaga 1951247  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 339  Q
    |||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1951246 tttcaaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagca 1951190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 282
Target Start/End: Complemental strand, 41059234 - 41059135
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  41059234 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcgcaagcaagcttaagcagcaagaaaagcaagaaaaatcgaaga 41059135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 2404722 - 2404809
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaaga 271  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||    
T  2404722 tgatgacagtcagtcattcgctatttttagagtctttttataatatttttgagttcacaagcaagattaagcagcaagaaaagcaaga 2404809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 45961707 - 45961598
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||||||||||  |||||||||| ||||| |||||||| |||||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  45961707 tgatgacagtcagtcatttgctatttttagagtcttgttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 45961608  T
Q  284 tttgaagaaa 293  Q
    ||||||||||    
T  45961607 tttgaagaaa 45961598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 185 - 293
Target Start/End: Complemental strand, 27537212 - 27537104
Alignment:
Q  185 gatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatt 284  Q
    |||||||||||||||||  |||||||||  |||||||||||||| |||||||||||||||||||||||| || |||| ||| || |||||||| ||||||    
T  27537212 gatgacagtcagtcatttgctatttttatagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagatt 27537113  T
Q  285 ttgaagaaa 293  Q
    |||||||||    
T  27537112 ttgaagaaa 27537104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 347
Target Start/End: Complemental strand, 34733217 - 34733100
Alignment:
Q  230 ttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacg 329  Q
    ||||||||||||||||||| |||| ||| ||| ||| || ||||| | ||||||||||||||||| ||||||||| ||||||||| |||||| ||||| |    
T  34733217 ttttgagttcacaagcaagattaaacagtaaggaaatcatgaaaagttgaagattttgaagaaagtaaaatcgtgacacgattgttgaaaacatgtcagg 34733118  T
Q  330 atttggagcacatgatga 347  Q
    |||||||||||| |||||    
T  34733117 atttggagcacaggatga 34733100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 21019367 - 21019287
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  21019367 tgatgacagtcagtcattcgctatttttagagtctttt-atgatatttttgagttcgcaaccaagcttaagcagcaagaaaa 21019287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 42021721 - 42021812
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||| |||||| |||||||||| |||||||||| |||||  |||||||||||||||| ||||||||||| |||| |||||||||    
T  42021721 tgatgacagtcaatcattcgctatttttagagtctttttataatattactgagttcacaagcaagtttaagcagcaataaaagcaagaaaaa 42021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 21108393 - 21108302
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||| || ||||||| ||||| |||||||||||||||  ||| ||||||| |||||| ||||||||| |||||||||    
T  21108393 tgatgacagtcagtcattcgctctttttagagtcttcttatgatatttttgaactcaaaagcaagattaagctgcaagaaaagcaagaaaaa 21108302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 31204014 - 31204123
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||| ||||||||||||  ||||||||||||| |||| || || |||| |||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  31204014 tgatgatagtcagtcattctttatttttagtgtcattttcattatgtttt-gagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 31204112  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  31204113 ttttgaagaaa 31204123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 6071854 - 6071791
Alignment:
Q  230 ttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 293  Q
    |||||||||||||||||||||||| || |||||||| || |||||||| |||||||||||||||    
T  6071854 ttttgagttcacaagcaagcttaaacaacaagaaaaacatgaaaaatacaagattttgaagaaa 6071791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 47708817 - 47708778
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  47708817 tgatgacagtcagtcattcactatttttagagtcttttta 47708778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 22460443 - 22460406
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttt 221  Q
    |||||||||||||||||||||||||||||| |||||||    
T  22460443 tgatgacagtcagtcattcactatttttagagtctttt 22460406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 45940621 - 45940661
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  45940621 tgatgacagtcagtcattcgctatttttagagtctttttat 45940661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 3088735 - 3088696
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  3088735 tgatgacagtcagtcatgcactatttttagagtcttttta 3088696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 22454319 - 22454290
Alignment:
Q  184 tgatgacagtcagtcattcactatttttag 213  Q
    ||||||||||||||||||||||||||||||    
T  22454319 tgatgacagtcagtcattcactatttttag 22454290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 49147113 - 49147150
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttt 221  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  49147113 tgatgacagtcaatcattcactatttttagagtctttt 49147150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 28110283 - 28110323
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  28110283 tgatgacagtccgtcattcgctatttttagagtctttttat 28110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 37184783 - 37184743
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  37184783 tgatgacagtccgtcattcgctatttttagagtctttttat 37184743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 25869835 - 25869998
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||| |||| || |||  ||| ||||| ||||||||||    
T  25869835 tgatgacagtcagtcattcactatttttagagtctttttcatgatatttt-gagttcacaagaaagtttaaacaacaaagaaaacaagagaaatagaaga 25869933  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25869934 ttttgaagaaagaaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacaggatga 25869998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 25873203 - 25873366
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| |||| || |||  ||| ||||| ||||||||||    
T  25873203 tgatgacagtcagtcattcactatttttagagtctttttcatgatatttt-gagttcacaagcaagtttaaacaacaaagaaaacaagagaaatagaaga 25873301  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  25873302 ttttgaagaaagaaaaatcgtgtcacgattgtcgaaaacgtgtcatgatttggagcacaggatga 25873366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 26358672 - 26358835
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| ||| |||| ||||||  ||  ||||||||||||||||    
T  26358672 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaaggaagtttaaacagcaaagaagacaagaaaaatagaaga 26358770  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  26358771 tttcgaagaaagcaaaatcgtgtcacgattgttgaaaacgtggcacgatttggagcacaggatga 26358835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 36809435 - 36809272
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  36809435 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaaga 36809337  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||| ||||||||| | ||||||||||||| |||||||||||||||||||||||||| |||||    
T  36809336 ttttgaggaaagcaaatttgtgtcacgattgttgaaaacgtgtcacgatttggagcacaggatga 36809272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 38006286 - 38006123
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||| ||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||| ||||||||| || |||  ||| ||||| ||||||||||    
T  38006286 tgattacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacaaacaagcttaaacaacaaagaaagcaagagaaatagaaga 38006188  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  38006187 ttttgaagaaagcaaaatcgtgtgacgattgtcgaaaacgtgtcacgatttggagcacaggatga 38006123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 25140040 - 25139877
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    |||||||||||||||||||   | |||||| || ||||||||||||||||||||||||||| |||||||| | ||||  ||| |||||||||||||||||    
T  25140040 tgatgacagtcagtcattccacaattttagagtttttttatgatatttttgagttcacaagtaagcttaaacggcaaagaaagcaagaaaaatagaagat 25139941  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    || |||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  25139940 ttcgaagaaagcaaaatcgtgtcacgattgttgacaacgtgtcacgatttggagcacaagatga 25139877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 184 - 338
Target Start/End: Original strand, 16788389 - 16788542
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||||||||||  ||||||||||  |||||| |||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  16788389 tgatgacagtcagtcatttgctatttttagaatctttt-atgataattttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaatataagat 16788487  T
Q  284 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagc 338  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  16788488 tttgatgaaagcacaatcgtgtcacgattgttgaaaacgtgtcacgatttagagc 16788542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 184 - 347
Target Start/End: Complemental strand, 25821922 - 25821754
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatat---ttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaataga 279  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||   |||||||||||||||||||||||| || |||  ||| |||||||||||||    
T  25821922 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatatatattttgagttcacaagcaagcttaaacaacaaagaaaacaagaaaaataga 25821823  T
Q  280 agatttt-gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    ||||||| ||||||||||||||||||||| |||||| ||||| ||||||||||||||| |||| |||||    
T  25821822 agatttttgaagaaagcaaaatcgtgtcaagattgttgaaaaggtgtcacgatttggaacacaggatga 25821754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 184 - 338
Target Start/End: Complemental strand, 30275691 - 30275537
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||| ||||||||||||| ||||||||||||| |||| |||||||||| || ||||||| |||| |||| || |||  ||| ||||||||||||||||    
T  30275691 tgatgatagtcagtcattcaatatttttagtgtcattttcatgatatttt-gaattcacaaacaagtttaaacaacaaagaaaacaagaaaaatagaaga 30275593  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagc 338  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  30275592 ttttgaggaaagcaaattcgtgtcacgattgttgaaaacgtgtcacgatttggagc 30275537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 15466170 - 15466298
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| || |||  ||| ||||| ||||||||||    
T  15466170 tgatgacaatcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacaacaaagaaatcaagagaaatagaaga 15466268  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgatt 312  Q
    ||||||||||||||||||||||||||||||    
T  15466269 ttttgaagaaagcaaaatcgtgtcacgatt 15466298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 10599951 - 10600042
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10599951 tgatgacagtcagtcattcactatttttagaatctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 10600042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 38014636 - 38014745
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  38014636 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 38014735  T
Q  284 tttgaagaaa 293  Q
    ||||||||||    
T  38014736 tttgaagaaa 38014745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 3874482 - 3874573
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  3874482 tgatgacagtcagtcattcattatttttagagtctttttaggatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaaaaa 3874573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 31430638 - 31430529
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    |||||||||| |||||||  |||||||||| |||||||||||||| |||||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  31430638 tgatgacagttagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 31430539  T
Q  284 tttgaagaaa 293  Q
    ||||||||||    
T  31430538 tttgaagaaa 31430529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 5665830 - 5665905
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagca 259  Q
    |||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5665830 tgatgacagtcaatcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagca 5665905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 43722904 - 43722985
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    |||||||||||| ||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43722904 tgatgacagtcaatcattcgttatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaa 43722985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 13972813 - 13972725
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaa 272  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  13972813 tgatgacagtcaatcattcgttatttttagagtctttttatgatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaa 13972725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 5104953 - 5105032
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    ||||||||||||||||||||||  |||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5104953 tgatgacagtcagtcattcact--ttttagagtttttttatgatatttttgagttcacaagcaagattaagcagcaagaaaa 5105032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 13136764 - 13136853
Alignment:
Q  186 atgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||   ||||||||| ||| ||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  13136764 atgacagtcagtcatttgttatttttagagtcattttatgatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaaaaa 13136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 312
Target Start/End: Original strand, 29439597 - 29439723
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    ||||||||||| |||||||  || |||||||||| |||| ||||| ||   ||||||||||||||| |||| ||||||  ||| ||||||||| ||||||    
T  29439597 tgatgacagtccgtcattcgttaattttagtgtcattttcatgatgtt---gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaaaagaaga 29439693  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgatt 312  Q
    ||| ||||||||||||||||||||||||||    
T  29439694 tttcgaagaaagcaaaatcgtgtcacgatt 29439723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 36985732 - 36985626
Alignment:
Q  187 tgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattt 285  Q
    ||||||||||||||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||||| || |||| ||| ||  |||||||||||||||    
T  36985732 tgacagtcagtcattcgttatttttagtgtcattttcatgatgtttt-gagttcacaagcaagcttaaacaacaaggaaagcagaaaaaatagaagattt 36985634  T
Q  286 tgaagaaa 293  Q
    ||||||||    
T  36985633 tgaagaaa 36985626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 6825974 - 6826055
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 265  Q
    |||||||||||| ||||||  ||| ||||  |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6825974 tgatgacagtcaatcattcgttatatttaaagtctttttatgatatttttgagttcacaagcaagattaagcatcaagaaaa 6826055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 45453051 - 45453160
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||| ||||||||||  ||||||||| ||| |||| ||||| |||| |||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  45453051 tgatgacaatcagtcattctttatttttagggtcattttcatgatgtttt-gagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 45453149  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  45453150 ttttgaagaaa 45453160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 31428414 - 31428340
Alignment:
Q  219 ttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 293  Q
    |||||||||| ||||||||||||||||||| |||| || |||| ||| || |||||||| |||||||||||||||    
T  31428414 ttttatgataattttgagttcacaagcaagtttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 31428340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 45456300 - 45456409
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||| |||| |||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||||| || |||  ||| || |||||||| ||||    
T  45456300 tgatgacaatcagccattctttatttttagtgtcattttcatgatgtttt-gagttcacaagcaagcttaaacaacaaagaaagcatgaaaaatacaaga 45456398  T
Q  283 ttttgaagaaa 293  Q
    |||||||||||    
T  45456399 ttttgaagaaa 45456409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 9189572 - 9189532
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  9189572 tgatgacagtcagtcattcgctatttttagagtctttttat 9189532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 37280596 - 37280556
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  37280596 tgatgacagtcagtcattcgctatttttagagtctttttat 37280556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 43208809 - 43208769
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  43208809 tgatgacagtcagtcattcgctatttttagagtctttttat 43208769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 31586823 - 31586785
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt 222  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  31586823 tgatgacagtcagtcattcgctatttttagagtcttttt 31586785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 212
Target Start/End: Complemental strand, 1504318 - 1504290
Alignment:
Q  184 tgatgacagtcagtcattcactattttta 212  Q
    |||||||||||||||||||||||||||||    
T  1504318 tgatgacagtcagtcattcactattttta 1504290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 212
Target Start/End: Complemental strand, 1507520 - 1507492
Alignment:
Q  184 tgatgacagtcagtcattcactattttta 212  Q
    |||||||||||||||||||||||||||||    
T  1507520 tgatgacagtcagtcattcactattttta 1507492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 8887842 - 8887882
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  8887842 tgatgacagtccgtcattcgctatttttagagtctttttat 8887882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 25957363 - 25957323
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  25957363 tgatgacagtccgtcattcgctatttttagagtctttttat 25957323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 40780658 - 40780698
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttat 224  Q
    |||||||||||| |||||| |||||||||| ||||||||||    
T  40780658 tgatgacagtcaatcattcgctatttttagagtctttttat 40780698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 61597 - 61760
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||||||||| || |||  ||| ||||| ||||||||||    
T  61597 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacaagcaagcttaaacaacaaagaaatcaagagaaatagaaga 61695  T
Q  283 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||    
T  61696 ttttaaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttgaaacacaagatga 61760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 246350 - 246232
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||| ||| |||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  246350 tgatgacggtctgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagat 246251  T
Q  284 tttgaagaaagcaaaatcg 302  Q
    |||||||||||||||||||    
T  246250 tttgaagaaagcaaaatcg 246232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 195 - 341
Target Start/End: Original strand, 290974 - 291120
Alignment:
Q  195 agtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 293  Q
    ||||||||||||||||||||||| |||| ||||||||||  |||||||||||||| |||| || |||  ||| |||||||||||||||||||||| ||||    
T  290974 agtcattcactatttttagtgtcattttcatgatatttta-agttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattttgaggaaa 291072  T
Q  294 gcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 341  Q
    ||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  291073 gcaaatttgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 291120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 197242 - 197358
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 283  Q
    ||||||||||| |||||||   |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  197242 tgatgacagtctgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcataagcagcaagaaaagcaagaaaaatagaagat 197341  T
Q  284 tttgaagaaagcaaaat 300  Q
    ||||||||||| |||||    
T  197342 tttgaagaaagtaaaat 197358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 4563 - 4654
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4563 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaatcaagaaaaa 4654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 207 - 347
Target Start/End: Original strand, 26277 - 26408
Alignment:
Q  207 tttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtc 306  Q
    ||||||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||         |||||||||||||||||||||||||||||||||    
T  26277 tttttagagtctttttatgatatttttgagttcacaagcaaacataagcagcatgaaa---------aatagaagattttgaagaaagcaaaatcgtgtc 26367  T
Q  307 acgattgtcgaaaacgtgtcacgatttggagcacatgatga 347  Q
    |||||||| ||||||||||||||||||| |||||| |||||    
T  26368 acgattgttgaaaacgtgtcacgatttgaagcacaggatga 26408  T

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Target: scaffold0270 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 1060 - 969
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||| ||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1060 tgatgacagtcagtcattcgctacttttagagtatttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 969  T

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Target: scaffold0270; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 4420 - 4329
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4420 tgatgtcagtcagtcattcgctacttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 4329  T

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Target: scaffold0270; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 11550 - 11459
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11550 tgatgtcagtcagtcattcgctacttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 11459  T

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Target: scaffold0334 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 18463 - 18588
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||| |||||||||| || |||  ||| ||||||||||||||||    
T  18463 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatatttt-gagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaaga 18561  T
Q  283 -ttttgaagaaagcaaaatcgtgtcac 308  Q
     ||||||||||||||||| ||||||||    
T  18562 tttttgaagaaagcaaaaacgtgtcac 18588  T

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Target: scaffold0381 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 6554 - 6462
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  6554 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcacaggcaagcttaagcaacaagaaaagcaagaaaaa 6462  T

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Target: scaffold0520 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 4880 - 4790
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaa 274  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| ||||  |||||||    
T  4880 tgatgacagtcagtcattcgttatttttagagtctttttatgatatttttgagttcacaaacaagattaagcagcaaaaaaagaaagaaaa 4790  T

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Target: scaffold0045 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 290
Target Start/End: Original strand, 88965 - 89071
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||||||||||||||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||||| || |||| ||| || |||||||||||||    
T  88965 tgatgacagtcagtcattcgttatttttagtgtcattttcatgatgtttt-gagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaaga 89063  T
Q  283 ttttgaag 290  Q
    ||||||||    
T  89064 ttttgaag 89071  T

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Target: scaffold1993 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1993
Description:

Target: scaffold1993; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 1045 - 1136
Alignment:
Q  184 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 275  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||| ||| ||||||||||| |||||||| |||||||||    
T  1045 tgatgacagtcagtcatttcac-atttttagagtctttttatgatattttggagttcataaggaagcttaagcaccaagaaaagcaagaaaaa 1136  T

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Target: scaffold1684 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 474 - 369
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 282  Q
    |||||| ||||||||||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||||| || |||| ||  || |||||||| ||||    
T  474 tgatgaaagtcagtcattctttatttttagtgtcattttcatgatgtttt-gagttcacaagcaagcttaaacaacaaggaacgcatgaaaaatacaaga 376  T
Q  283 ttttgaa 289  Q
    |||||||    
T  375 ttttgaa 369  T

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Target: scaffold0567 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 7055 - 7016
Alignment:
Q  184 tgatgacagtcagtcattcactatttttagtgtcttttta 223  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  7055 tgatgacagtcagtcattcactatttttagagtcttttta 7016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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