View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4706-Insertion-10 (Length: 135)
Name: NF4706-Insertion-10
Description: NF4706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4706-Insertion-10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 113; Significance: 1e-57; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 46400565 - 46400690
Alignment:
| Q |
8 |
ctctgttataatagctccgatttctcgaaaattttggcgaattaacttatacacagtttcgttaaaaaattaaatcaagtttcgaaagcagaattctata |
107 |
Q |
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| T |
46400565 |
ctctgttataatagctccgatttctcgaaaattttggcgaattaacttataca--gtttcgttaaacaattaaatcaagtttcgaaagcagaattctata |
46400662 |
T |
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| Q |
108 |
caaatttgattatcgcttaaacgtttta |
135 |
Q |
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| T |
46400663 |
caaatttgattatcgcttaaacgtttta |
46400690 |
T |
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