View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4706-Insertion-12 (Length: 335)
Name: NF4706-Insertion-12
Description: NF4706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4706-Insertion-12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 7 - 335
Target Start/End: Original strand, 30242137 - 30242465
Alignment:
| Q |
7 |
aatatgttgtcacatgaaatgatgaagctaacatttttaccaaaacaattttgactaaccaaatggttgcaccaattaaaacagcaacaagtgcttgaaa |
106 |
Q |
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| T |
30242137 |
aatatgttgtcacatgaaatgatgaagctaacatttttaccaaaacaattttgactaaccaaatggttgcaccaattaaaacagcaacaagtgcttgaaa |
30242236 |
T |
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| Q |
107 |
cactttgttgaggaatttatggtttttcttttggacatcatcgaaaacgacactccaatatgagagtaaaacaagacctaaccataaacaattacgaatg |
206 |
Q |
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| T |
30242237 |
cactttgttgaggaatttatggtttttcttttggacatcatcgaaaacgacactccaatatgagagtaaaacaagacctaaccataaacaattacgaatg |
30242336 |
T |
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| Q |
207 |
ctgttccttaaaccatagatgaaatataaaactttttctcttagcatgaagtttctttcgataaagaaaacggtgaaactaactaaccaacttgaaaaca |
306 |
Q |
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| T |
30242337 |
ctgttccttaaaccatagatgaaatataaaactttttctcttagcatgaagtttctttcgataaagaaaacggtgaaactaactaaccaacttgaaaaca |
30242436 |
T |
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| Q |
307 |
aacggccactaaatgttaccattgccatt |
335 |
Q |
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| T |
30242437 |
aacggccactaaatgttaccattgccatt |
30242465 |
T |
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