View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4707-Insertion-2 (Length: 474)

Name: NF4707-Insertion-2
Description: NF4707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4707-Insertion-2
NF4707-Insertion-2
[»] chr8 (22 HSPs)
chr8 (8-219)||(4738956-4739167)
chr8 (8-193)||(4691334-4691519)
chr8 (8-219)||(4752104-4752315)
chr8 (8-174)||(4887861-4888027)
chr8 (8-219)||(4683282-4683493)
chr8 (8-187)||(4774025-4774204)
chr8 (11-217)||(4920926-4921132)
chr8 (8-211)||(4728239-4728442)
chr8 (8-168)||(4705541-4705701)
chr8 (8-219)||(4717652-4717863)
chr8 (8-155)||(4792265-4792412)
chr8 (38-219)||(10449314-10449492)
chr8 (10-194)||(4871836-4872020)
chr8 (29-219)||(4910874-4911061)
chr8 (10-219)||(21437391-21437600)
chr8 (10-219)||(4898534-4898740)
chr8 (10-135)||(4847430-4847555)
chr8 (8-135)||(4827353-4827480)
chr8 (39-135)||(4802180-4802276)
chr8 (236-308)||(4683132-4683204)
chr8 (236-303)||(4691141-4691208)
chr8 (265-306)||(4774347-4774388)


Alignment Details
Target: chr8 (Bit Score: 140; Significance: 4e-73; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 4739167 - 4738956
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||  ||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  4739167 ggtgaaaggctcttaacagcgacttgagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaatagtagttttgaagttatcag 4739068  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacagcaatgataaagaa 207  Q
    |||| ||||||||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||  ||||||  ||||||| ||    
T  4739067 taatgttgagaatttcagaataactgaatttttggtgttttgatttcattgaacccctttccttagaatttgaagacgtaagtacagctgtgataaataa 4738968  T
Q  208 aattgaatgaaa 219  Q
    ||||||||||||    
T  4738967 aattgaatgaaa 4738956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 4691519 - 4691334
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  4691519 ggtgaaagcctcttaacagcaacttgagtttgatcttgtagaatgccaaagtaaacttttccaaatcctccttctccaatagtagttttgaagttatcag 4691420  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctaca 193  Q
    |||| |||||||||||||||||||||||  | || || || ||||||||||||||||||||||||||||||||||||||| |||||    
T  4691419 taatgttgagaatttcagtataactgaatctctgatgtttggatttcattgaacccctttccttagagtttgaagacgtaactaca 4691334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 4752315 - 4752104
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||| |||||||    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4752315 ggtgaaagcctcttaacaatgacttcagtttgatcttgtagaatgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttatcag 4752216  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacagcaatgataaagaa 207  Q
    |||| ||||||||||||| |||| |||| ||||| || ||||||||||||||||||||||||||||| ||||||| |||| |||||||  | ||||| ||    
T  4752215 taatattgagaatttcagaataattgaaattttggtgttttgatttcattgaacccctttccttagaatttgaaggcgtaactacagctgtaataaataa 4752116  T
Q  208 aattgaatgaaa 219  Q
    ||| ||||||||    
T  4752115 aatcgaatgaaa 4752104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 4887861 - 4888027
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||||||||||| || |||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4887861 ggtgaaagcatcttaacagcgacttgagtttgatcctgtagaatgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttatcag 4887960  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttaga 174  Q
    |||| |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  4887961 taatattgagaatttcagtgtaactgaacttttgatgttttgatttcattgaacccctttccttaga 4888027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 4683493 - 4683282
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    |||||||||  |||||| || |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  4683493 ggtgaaagccgcttaacagcgacttgagtttggtcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttatcgg 4683394  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacagcaatgataaagaa 207  Q
    |||| |||| ||||||||| |||||||| ||||| || |||||||||||||||| ||||| |||||| ||||||| |||| |||||||  ||||||| ||    
T  4683393 taatattgacaatttcagtgtaactgaatttttgatgttttgatttcattgaactccttttcttagaatttgaaggcgtaactacagctgtgataaataa 4683294  T
Q  208 aattgaatgaaa 219  Q
    ||||||||||||    
T  4683293 aattgaatgaaa 4683282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 4774025 - 4774204
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4774025 ggtgaaagcatcttaacagcgacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttatcag 4774124  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgta 187  Q
    |||| |||| ||||||||||||||||||  |||| || ||||||||  ||||| |||| | |||||||||||||||||||    
T  4774125 taatattgacaatttcagtataactgaatctttgatgttttgattttgttgaagccctattcttagagtttgaagacgta 4774204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 4920926 - 4921132
Alignment:
Q  11 gaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcagtaa 110  Q
    |||||| ||||||| || |||| |||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||| ||||||||||| |||||||    
T  4920926 gaaagcctcttaacagctacttgagtttgatcttgtagaatgccgaagtaaacttttccaaaacctccttctccaagaatggttttgaagttatcagtaa 4921025  T
Q  111 ttttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacagcaatgataaagaaaat 210  Q
    | |||||||||||||||||||||||  |||  ||||||||| |||||||||||||||  ||||| |||||||||||| |||||||| |||||||||||||    
T  4921026 tattgagaatttcagtataactgaatctttcatgctttgatatcattgaacccctttttttagaatttgaagacgtaactacagcagtgataaagaaaat 4921125  T
Q  211 tgaatga 217  Q
    |||||||    
T  4921126 tgaatga 4921132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 4728442 - 4728239
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||| ||||||| || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  4728442 ggtgaaagcctcttaaccgcgacttgagtttgatcttgtagaatgccaaagtaaacttttccaaatcctccttctccaataacagttttgaagttatcag 4728343  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacagcaatgataaagaa 207  Q
    |||| ||||||||||||| ||||||||| ||||| || || |||||||||||||||||||| || || | |||||||| ||| |||||  ||||||| ||    
T  4728342 taatgttgagaatttcagaataactgaatttttggtgtttggatttcattgaacccctttcatttgaatatgaagacgcagccacagctgtgataaataa 4728243  T
Q  208 aatt 211  Q
    ||||    
T  4728242 aatt 4728239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 4705701 - 4705541
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||||||||||| || |||| |||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||||| |||||| ||||    
T  4705701 ggtgaaagcatcttaacagcgacttgagtttgatcttgtagaatgccaaaataaactgttccaaaacctccttctccaataatagtttggaagttatcag 4705602  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttc 168  Q
    |||| |||||||||||||||||| |||| ||||| || |||||||||||||||||||||||    
T  4705601 taatattgagaatttcagtataagtgaatttttggtgttttgatttcattgaacccctttc 4705541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 4717863 - 4717652
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||| ||||||| || |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| || |    
T  4717863 ggtgaaagcctcttaacagcgacttgagtttgatcttttagaatgccaaagtaaacttttccaaatcctccttctccaatgatagttttgaagttatccg 4717764  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacagcaatgataaagaa 207  Q
    ||||||| |||||||| ||||||||||| ||||| || |||||||||||||||||| | |  ||||| |||| ||||||| || || |  ||||||| ||    
T  4717763 taattttaagaatttcggtataactgaatttttggtgttttgatttcattgaacccttattattagaatttggagacgtatcttcatctgtgataaataa 4717664  T
Q  208 aattgaatgaaa 219  Q
    |||| |||||||    
T  4717663 aattcaatgaaa 4717652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 4792265 - 4792412
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||||||||||  ||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4792265 ggtgaaagcatcttaatagcaacttgagtttgatcttgaagagtgccaagataaacttttccaaatcctccttctccaataatagttttgaagttatcag 4792364  T
Q  108 taattttgagaatttcagtataactgaacttttgttgctttgatttca 155  Q
    |||| |||||||||||||||||||||||  |||| || ||||||||||    
T  4792365 taatattgagaatttcagtataactgaatctttgatgttttgatttca 4792412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 38 - 219
Target Start/End: Complemental strand, 10449492 - 10449314
Alignment:
Q  38 tgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcagtaattttgagaatttcagtataactgaact 137  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||      
T  10449492 tgatcttgtaaaatgccaatgtaaacttttccaaatcctccttctccaataatagttttgaggttatcagtaatattgagaatttcagtgtaactgaatg 10449393  T
Q  138 tttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacagcaatgataaagaaaattgaatgaaa 219  Q
    |||| |||||||||||||||||| || ||| |||||| |||||  | ||||||||||   ||||||||||||||||||||||    
T  10449392 tttgatgctttgatttcattgaatcctttttcttagattttgaccatgtagctacag---tgataaagaaaattgaatgaaa 10449314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 4871836 - 4872020
Alignment:
Q  10 tgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcagta 109  Q
    |||||| || ||||| ||||||| |||  ||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  4871836 tgaaagaattttaacagcaacttgagtgagatcttgtaaaatgccaatgtaaacttttccaaatcctccttctccaataattgttttgaagttatcagta 4871935  T
Q  110 attttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacag 194  Q
    || ||||||||||| || ||||||||  |||| |||||||||||||||  | || ||| |||||| ||||| |||||||||||||    
T  4871936 atattgagaatttcggtgtaactgaatatttgatgctttgatttcatttcatcctttttcttagaatttgacgacgtagctacag 4872020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 29 - 219
Target Start/End: Original strand, 4910874 - 4911061
Alignment:
Q  29 acttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcagtaattttgagaatttcagtat 128  Q
    |||| ||| |||||||||| | | |||| |||||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||||||||||  |    
T  4910874 acttgagtgtgatcttgtaaaattccaacgtaaacttttccaaatcctccttctccaataacagttttaaagttatcagtaatattgagaatttcagagt 4910973  T
Q  129 aactgaacttttgttgctttgatttcattgaaccc-ctttccttagagtttgaagacgtagctacagcaatgataaagaaaattgaatgaaa 219  Q
    | |||||| |||| ||||||||||||||||||||| |||||| |||| |||||  ||||||||||||   |||| |||||||||||||||||    
T  4910974 agctgaacatttgatgctttgatttcattgaaccctctttcc-tagaatttgaccacgtagctacag---tgatcaagaaaattgaatgaaa 4911061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 10 - 219
Target Start/End: Original strand, 21437391 - 21437600
Alignment:
Q  10 tgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcagta 109  Q
    ||||||||| || || || |||| |||  |||| |||| | |||||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  21437391 tgaaagcatttttaccgctacttgagtgcgatcatgtaaaatgccaatgtaaacttttccaaatcctccttctccaataactgttttgaagttatcagta 21437490  T
Q  110 attttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacagcaatgataaagaaaa 209  Q
    || |||||||||||||| ||||||||  |||| ||||||||||||||  ||| ||||| |||||| |||||  ||||||||||  || ||||||| |||     
T  21437491 atattgagaatttcagtgtaactgaatgtttgatgctttgatttcatccaacgccttttcttagaatttgagcacgtagctactacattgataaataaag 21437590  T
Q  210 ttgaatgaaa 219  Q
    ||||||||||    
T  21437591 ttgaatgaaa 21437600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 10 - 219
Target Start/End: Original strand, 4898534 - 4898740
Alignment:
Q  10 tgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcagta 109  Q
    ||||||||| || || || |||| ||| |||||||||| |  ||||| |||||||||||||||||||||||||||| |||||||||||||||| |  |||    
T  4898534 tgaaagcatttttacagccacttgagtgtgatcttgtaaaaagccaatgtaaacttttccaaatcctccttctccagtaatagttttgaagttattcgta 4898633  T
Q  110 attttgagaatttcagtataactgaacttttgttgctttgatttcattgaacccctttccttagagtttgaagacgtagctacagcaatgataaagaaaa 209  Q
    || |||||||||||||  ||||||||  |||| | ||||||||||||||||| ||||| |||||| ||| |  ||||||||   | | |||||| |||||    
T  4898634 atattgagaatttcagcgtaactgaatgtttgattctttgatttcattgaacgccttttcttagaatttaagcacgtagct---gaagtgataaggaaaa 4898730  T
Q  210 ttgaatgaaa 219  Q
    ||||||||||    
T  4898731 ttgaatgaaa 4898740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 4847430 - 4847555
Alignment:
Q  10 tgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcagta 109  Q
    ||||||||| || || || |||| ||| |||||||||| | |||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  4847430 tgaaagcatttttacagctacttgagtgtgatcttgtaaaatgccaatgtaaacttttccaaatcctccttctccaattatagttttgaagttatcagta 4847529  T
Q  110 attttgagaatttcagtataactgaa 135  Q
    || |||||||||||| | ||||||||    
T  4847530 atattgagaatttcattgtaactgaa 4847555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 4827353 - 4827480
Alignment:
Q  8 ggtgaaagcatcttaacggcaacttcagtttgatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcag 107  Q
    ||||||||||||||||| ||||||| |||||  | ||||| | | |||| ||||||||||||||||||||||||||||||| ||||||||||||| | ||    
T  4827353 ggtgaaagcatcttaacagcaacttgagttttgttttgtaaaattccaaggtaaacttttccaaatcctccttctccaatagtagttttgaagttattag 4827452  T
Q  108 taattttgagaatttcagtataactgaa 135  Q
    | || |||||||||||||| ||||||||    
T  4827453 tgatattgagaatttcagtgtaactgaa 4827480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 4802180 - 4802276
Alignment:
Q  39 gatcttgtagagtgccaaagtaaacttttccaaatcctccttctccaataatagttttgaagttgtcagtaattttgagaatttcagtataactgaa 135  Q
    ||||||||| | |||| | |||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||||||| | ||||||||    
T  4802180 gatcttgtaaaatgccgatgtaaacttttccgaatcctccttctccaattatagttttgaagttatcagtaatattgagaatttcattgtaactgaa 4802276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 4683204 - 4683132
Alignment:
Q  236 tatagctaaagttttatggagaatcgattctaaaatatgttaagagcaaaaaatgatttcataaataagtact 308  Q
    |||||||||||||||||||||| |||| |||||   |||||| ||| |||| |||||||||||||||| ||||    
T  4683204 tatagctaaagttttatggagagtcgactctaattcatgttatgagaaaaatatgatttcataaataaatact 4683132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 4691208 - 4691141
Alignment:
Q  236 tatagctaaagttttatggagaatcgattctaaaatatgttaagagcaaaaaatgatttcataaataa 303  Q
    |||||||||||||||||||||| | || ||||| |||||||  ||| ||| |||||||||||||||||    
T  4691208 tatagctaaagttttatggagagttgactctaatatatgttgtgagaaaataatgatttcataaataa 4691141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 4774347 - 4774388
Alignment:
Q  265 ctaaaatatgttaagagcaaaaaatgatttcataaataagta 306  Q
    |||| |||||||| ||||||||||| ||||||||||||||||    
T  4774347 ctaatatatgttatgagcaaaaaattatttcataaataagta 4774388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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