View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4708-Insertion-5 (Length: 533)

Name: NF4708-Insertion-5
Description: NF4708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4708-Insertion-5
NF4708-Insertion-5
[»] chr7 (76 HSPs)
chr7 (8-316)||(28230421-28230729)
chr7 (13-318)||(24042139-24042445)
chr7 (39-318)||(42925592-42925872)
chr7 (9-316)||(36468490-36468796)
chr7 (43-316)||(3936040-3936314)
chr7 (43-316)||(37518248-37518522)
chr7 (9-316)||(47202391-47202700)
chr7 (8-316)||(36629101-36629409)
chr7 (53-316)||(36408314-36408577)
chr7 (43-316)||(19225551-19225826)
chr7 (158-316)||(9151844-9152002)
chr7 (78-318)||(8154866-8155107)
chr7 (161-316)||(42865055-42865210)
chr7 (39-316)||(31642969-31643247)
chr7 (10-316)||(3304711-3305020)
chr7 (43-316)||(33151139-33151409)
chr7 (50-221)||(43737063-43737234)
chr7 (132-316)||(31985470-31985655)
chr7 (200-316)||(1518797-1518913)
chr7 (230-316)||(19818500-19818586)
chr7 (10-255)||(6467594-6467843)
chr7 (319-427)||(37518047-37518155)
chr7 (319-427)||(42925424-42925532)
chr7 (156-316)||(6467093-6467254)
chr7 (44-316)||(33573996-33574265)
chr7 (200-316)||(5278354-5278470)
chr7 (328-427)||(42864885-42864985)
chr7 (319-427)||(43737349-43737457)
chr7 (319-425)||(19225384-19225490)
chr7 (211-316)||(24690287-24690392)
chr7 (319-427)||(19818647-19818754)
chr7 (327-427)||(47202762-47202862)
chr7 (319-426)||(36629470-36629577)
chr7 (180-316)||(36946245-36946381)
chr7 (212-305)||(48776175-48776268)
chr7 (343-427)||(9152082-9152166)
chr7 (319-427)||(24041981-24042088)
chr7 (180-318)||(16983693-16983832)
chr7 (215-305)||(43185887-43185977)
chr7 (204-317)||(8214242-8214355)
chr7 (322-427)||(8155169-8155274)
chr7 (322-427)||(31643310-31643415)
chr7 (218-317)||(8214453-8214552)
chr7 (330-393)||(33151480-33151543)
chr7 (211-305)||(48775711-48775803)
chr7 (43-165)||(42877149-42877272)
chr7 (343-427)||(3304535-3304619)
chr7 (345-424)||(43186078-43186157)
chr7 (261-316)||(43737233-43737288)
chr7 (322-427)||(7115053-7115159)
chr7 (174-315)||(25613067-25613209)
chr7 (240-317)||(16278236-16278313)
chr7 (319-427)||(36468323-36468429)
chr7 (319-425)||(24690122-24690225)
chr7 (335-427)||(31985301-31985393)
chr7 (132-318)||(7115221-7115408)
chr7 (30-124)||(28346067-28346161)
chr7 (240-317)||(5730928-5731005)
chr7 (240-309)||(5731145-5731214)
chr7 (335-427)||(28230276-28230368)
chr7 (364-427)||(16278325-16278388)
chr7 (370-427)||(33573832-33573889)
chr7 (364-428)||(5731062-5731125)
chr7 (218-270)||(16278423-16278475)
chr7 (368-424)||(47239505-47239561)
chr7 (364-427)||(8214378-8214441)
chr7 (174-316)||(39581802-39581945)
chr7 (175-243)||(47239630-47239699)
chr7 (80-124)||(9151784-9151828)
chr7 (363-427)||(48705783-48705847)
chr7 (343-425)||(1519005-1519087)
chr7 (8-124)||(28349229-28349346)
chr7 (333-427)||(30861362-30861458)
chr7 (283-316)||(37398844-37398877)
chr7 (379-427)||(26554947-26554995)
chr7 (132-180)||(26555130-26555178)
[»] chr2 (72 HSPs)
chr2 (43-316)||(44465675-44465950)
chr2 (43-316)||(32187817-32188092)
chr2 (9-316)||(15995061-15995370)
chr2 (43-316)||(33452391-33452665)
chr2 (43-316)||(45153739-45154013)
chr2 (58-314)||(17474749-17475006)
chr2 (43-316)||(41510377-41510651)
chr2 (50-316)||(39447101-39447368)
chr2 (39-316)||(36948893-36949171)
chr2 (102-316)||(42894369-42894583)
chr2 (102-316)||(36874977-36875191)
chr2 (13-318)||(25217721-25218042)
chr2 (43-316)||(41854852-41855111)
chr2 (142-316)||(41203134-41203309)
chr2 (132-316)||(34517123-34517307)
chr2 (44-316)||(5507349-5507625)
chr2 (319-427)||(42894644-42894752)
chr2 (200-316)||(8388741-8388857)
chr2 (319-427)||(44465519-44465627)
chr2 (146-318)||(30763679-30763857)
chr2 (322-427)||(17474577-17474682)
chr2 (333-427)||(25217553-25217647)
chr2 (174-309)||(19109970-19110105)
chr2 (206-316)||(16750377-16750485)
chr2 (204-317)||(17766776-17766889)
chr2 (319-427)||(41510208-41510316)
chr2 (319-427)||(33452221-33452330)
chr2 (240-317)||(34519484-34519561)
chr2 (322-427)||(38308611-38308716)
chr2 (319-426)||(5507686-5507794)
chr2 (319-427)||(27670763-27670871)
chr2 (319-427)||(38065356-38065464)
chr2 (200-304)||(38066633-38066737)
chr2 (86-205)||(4268297-4268416)
chr2 (343-429)||(34517394-34517480)
chr2 (322-427)||(41854682-41854788)
chr2 (240-317)||(9847159-9847236)
chr2 (240-317)||(9847367-9847444)
chr2 (200-316)||(35251020-35251136)
chr2 (319-427)||(41202968-41203073)
chr2 (319-427)||(15994898-15995000)
chr2 (228-316)||(33440458-33440545)
chr2 (322-427)||(39447432-39447532)
chr2 (8-84)||(25715259-25715336)
chr2 (319-427)||(30763916-30764025)
chr2 (251-316)||(37773764-37773829)
chr2 (203-316)||(41204025-41204138)
chr2 (212-316)||(27900562-27900666)
chr2 (228-308)||(34817219-34817299)
chr2 (200-316)||(33833845-33833957)
chr2 (200-245)||(12885447-12885492)
chr2 (233-294)||(25715683-25715744)
chr2 (372-425)||(33440291-33440344)
chr2 (200-316)||(42478833-42478949)
chr2 (200-291)||(3957874-3957965)
chr2 (364-427)||(17133037-17133100)
chr2 (376-427)||(32187663-32187714)
chr2 (319-362)||(32187713-32187756)
chr2 (343-429)||(11457243-11457329)
chr2 (257-316)||(38308779-38308840)
chr2 (137-193)||(33366954-33367010)
chr2 (364-427)||(9847085-9847147)
chr2 (376-427)||(16750223-16750274)
chr2 (364-427)||(25715773-25715835)
chr2 (320-362)||(16750273-16750315)
chr2 (206-316)||(45293737-45293846)
chr2 (366-423)||(9847297-9847353)
chr2 (39-84)||(10288658-10288703)
chr2 (259-316)||(17132875-17132932)
chr2 (30-117)||(9847572-9847660)
chr2 (265-317)||(25715511-25715563)
chr2 (200-316)||(26228156-26228272)
[»] chr8 (72 HSPs)
chr8 (25-316)||(44106137-44106429)
chr8 (58-316)||(27927894-27928153)
chr8 (43-316)||(8885406-8885680)
chr8 (39-316)||(3094609-3094891)
chr8 (16-316)||(37248463-37248764)
chr8 (37-316)||(42280844-42281127)
chr8 (38-316)||(34853257-34853534)
chr8 (9-318)||(16310497-16310807)
chr8 (47-316)||(28916719-28916981)
chr8 (43-316)||(9073436-9073710)
chr8 (46-318)||(31519843-31520116)
chr8 (39-316)||(21004318-21004590)
chr8 (132-301)||(40994814-40994983)
chr8 (180-318)||(14164008-14164146)
chr8 (174-316)||(17119832-17119975)
chr8 (205-316)||(36165791-36165902)
chr8 (174-311)||(4259593-4259731)
chr8 (202-318)||(11698267-11698383)
chr8 (200-302)||(40392626-40392728)
chr8 (204-317)||(33472372-33472485)
chr8 (319-427)||(11698100-11698208)
chr8 (319-426)||(28917042-28917149)
chr8 (212-318)||(33472173-33472279)
chr8 (225-316)||(40328012-40328103)
chr8 (233-317)||(10833467-10833551)
chr8 (13-193)||(41530570-41530753)
chr8 (321-427)||(42280675-42280781)
chr8 (180-316)||(6395153-6395290)
chr8 (200-316)||(1076646-1076761)
chr8 (319-427)||(34853595-34853703)
chr8 (330-427)||(8885236-8885334)
chr8 (212-316)||(28423523-28423627)
chr8 (233-317)||(31234470-31234554)
chr8 (247-318)||(9845323-9845394)
chr8 (322-427)||(31519678-31519781)
chr8 (230-316)||(36980689-36980775)
chr8 (211-304)||(7982479-7982572)
chr8 (319-427)||(3094952-3095060)
chr8 (204-290)||(9845487-9845573)
chr8 (231-317)||(24627903-24627989)
chr8 (200-302)||(36317882-36317988)
chr8 (319-427)||(14163841-14163949)
chr8 (233-297)||(24627697-24627761)
chr8 (247-317)||(41530812-41530882)
chr8 (211-312)||(10840714-10840815)
chr8 (200-316)||(1374030-1374146)
chr8 (236-316)||(7981640-7981720)
chr8 (319-427)||(36980836-36980944)
chr8 (234-309)||(31234689-31234764)
chr8 (39-117)||(36404306-36404385)
chr8 (247-304)||(7965935-7965992)
chr8 (211-302)||(8621606-8621696)
chr8 (253-316)||(34645520-34645583)
chr8 (43-94)||(40994751-40994802)
chr8 (364-427)||(31234605-31234669)
chr8 (364-426)||(40994982-40995044)
chr8 (319-427)||(17119664-17119771)
chr8 (319-367)||(36165681-36165729)
chr8 (327-410)||(40328172-40328256)
chr8 (322-414)||(44106493-44106585)
chr8 (364-427)||(24627792-24627854)
chr8 (364-427)||(33472289-33472352)
chr8 (364-413)||(41530894-41530942)
chr8 (379-427)||(4259466-4259514)
chr8 (364-424)||(24628001-24628060)
chr8 (319-427)||(27927734-27927833)
chr8 (331-414)||(28423699-28423783)
chr8 (343-426)||(7981807-7981890)
chr8 (39-124)||(7971142-7971228)
chr8 (380-425)||(9073847-9073892)
chr8 (330-426)||(36318074-36318170)
chr8 (200-316)||(39093598-39093714)
[»] chr6 (49 HSPs)
chr6 (10-316)||(4508255-4508562)
chr6 (9-318)||(3717234-3717544)
chr6 (8-318)||(23406693-23407004)
chr6 (47-316)||(17264346-17264616)
chr6 (43-316)||(14587513-14587787)
chr6 (17-318)||(5699464-5699773)
chr6 (9-316)||(1945483-1945791)
chr6 (9-318)||(2813176-2813487)
chr6 (156-316)||(2539497-2539657)
chr6 (39-270)||(32035041-32035268)
chr6 (11-316)||(24604314-24604623)
chr6 (9-316)||(5638776-5639068)
chr6 (43-205)||(7412760-7412922)
chr6 (9-214)||(33413402-33413608)
chr6 (92-316)||(9905100-9905321)
chr6 (200-316)||(7734279-7734395)
chr6 (319-426)||(2539718-2539825)
chr6 (156-316)||(29289578-29289740)
chr6 (205-316)||(29519374-29519485)
chr6 (330-423)||(14587349-14587442)
chr6 (319-427)||(21514815-21514923)
chr6 (244-311)||(21514989-21515056)
chr6 (319-427)||(4508086-4508194)
chr6 (157-316)||(13800980-13801139)
chr6 (344-427)||(237090-237173)
chr6 (319-427)||(2813006-2813116)
chr6 (328-427)||(24604145-24604244)
chr6 (319-425)||(17264677-17264782)
chr6 (319-427)||(3717066-3717174)
chr6 (228-316)||(34528558-34528646)
chr6 (344-423)||(5639153-5639232)
chr6 (230-316)||(236914-237000)
chr6 (233-317)||(17500989-17501073)
chr6 (132-208)||(21517542-21517618)
chr6 (231-317)||(17501197-17501288)
chr6 (265-316)||(32044537-32044588)
chr6 (212-306)||(6704089-6704183)
chr6 (372-427)||(5699918-5699973)
chr6 (377-427)||(9905388-9905438)
chr6 (33-107)||(21517633-21517713)
chr6 (377-427)||(1945366-1945416)
chr6 (251-316)||(3365806-3365871)
chr6 (201-316)||(14037918-14038030)
chr6 (391-427)||(7416125-7416161)
chr6 (261-316)||(10310384-10310439)
chr6 (369-426)||(3365976-3366033)
chr6 (319-384)||(7413017-7413082)
chr6 (212-316)||(16450316-16450420)
chr6 (367-427)||(16450533-16450593)
[»] chr4 (97 HSPs)
chr4 (43-316)||(19835460-19835734)
chr4 (38-316)||(25491348-25491627)
chr4 (43-316)||(40703603-40703878)
chr4 (9-317)||(38536076-38536385)
chr4 (53-316)||(48319017-48319281)
chr4 (43-316)||(17933090-17933364)
chr4 (13-310)||(55052578-55052876)
chr4 (43-316)||(46440227-46440502)
chr4 (16-316)||(2505984-2506288)
chr4 (43-308)||(7931601-7931863)
chr4 (11-318)||(25752395-25752706)
chr4 (132-316)||(31582375-31582559)
chr4 (8-316)||(3703202-3703513)
chr4 (8-316)||(6003626-6003936)
chr4 (39-316)||(32441747-32442024)
chr4 (39-316)||(34972810-34973078)
chr4 (9-316)||(6228766-6229073)
chr4 (39-316)||(49396944-49397226)
chr4 (97-316)||(8106387-8106608)
chr4 (43-246)||(54631485-54631690)
chr4 (138-316)||(41413051-41413231)
chr4 (39-263)||(23523842-23524068)
chr4 (51-256)||(29822568-29822773)
chr4 (9-196)||(25539021-25539209)
chr4 (211-316)||(53893978-53894083)
chr4 (229-318)||(25538930-25539019)
chr4 (319-427)||(25752227-25752335)
chr4 (321-426)||(7931933-7932038)
chr4 (229-318)||(41323043-41323132)
chr4 (200-316)||(7863539-7863655)
chr4 (319-426)||(46440057-46440164)
chr4 (321-427)||(48318848-48318954)
chr4 (225-316)||(27742066-27742158)
chr4 (323-429)||(25491177-25491283)
chr4 (327-429)||(54631274-54631376)
chr4 (200-316)||(14474165-14474280)
chr4 (319-427)||(19835795-19835903)
chr4 (156-240)||(52077017-52077101)
chr4 (319-426)||(25538763-25538870)
chr4 (319-425)||(8106669-8106775)
chr4 (203-305)||(27879649-27879751)
chr4 (182-316)||(32600920-32601054)
chr4 (330-427)||(38536457-38536554)
chr4 (322-423)||(40703942-40704043)
chr4 (245-316)||(47873953-47874024)
chr4 (331-414)||(52089541-52089624)
chr4 (215-316)||(47784101-47784202)
chr4 (322-427)||(34973142-34973247)
chr4 (212-301)||(49002822-49002911)
chr4 (319-427)||(17932921-17933029)
chr4 (319-427)||(18050973-18051081)
chr4 (330-426)||(29822866-29822962)
chr4 (232-312)||(52089315-52089395)
chr4 (179-316)||(37222037-37222175)
chr4 (37-152)||(53894108-53894224)
chr4 (231-309)||(25140675-25140753)
chr4 (327-428)||(38417075-38417175)
chr4 (330-429)||(6003455-6003554)
chr4 (200-278)||(38416925-38417004)
chr4 (231-309)||(25140466-25140544)
chr4 (247-317)||(25140874-25140944)
chr4 (319-423)||(2505819-2505923)
chr4 (335-427)||(6228597-6228689)
chr4 (322-405)||(32442088-32442171)
chr4 (351-425)||(49001341-49001415)
chr4 (333-427)||(53893810-53893904)
chr4 (327-396)||(52089468-52089537)
chr4 (245-317)||(27181473-27181544)
chr4 (343-427)||(31582214-31582297)
chr4 (45-121)||(50392557-50392635)
chr4 (335-413)||(23524078-23524156)
chr4 (319-425)||(27741899-27742005)
chr4 (233-306)||(42660338-42660411)
chr4 (330-427)||(49397297-49397394)
chr4 (275-316)||(54631445-54631486)
chr4 (200-316)||(372017-372135)
chr4 (174-300)||(346135-346260)
chr4 (56-186)||(38416518-38416649)
chr4 (206-316)||(42497829-42497939)
chr4 (200-316)||(1788092-1788208)
chr4 (343-427)||(3703039-3703123)
chr4 (371-427)||(14473999-14474055)
chr4 (200-316)||(18487617-18487733)
chr4 (375-427)||(32601169-32601221)
chr4 (319-427)||(41322877-41322984)
chr4 (366-427)||(37222286-37222347)
chr4 (10-97)||(42660430-42660519)
chr4 (251-316)||(47456749-47456814)
chr4 (319-423)||(47456875-47456984)
chr4 (43-122)||(52076956-52077036)
chr4 (250-309)||(37770020-37770079)
chr4 (376-423)||(53836072-53836119)
chr4 (43-99)||(18051103-18051161)
chr4 (369-427)||(48095646-48095704)
chr4 (343-427)||(4936506-4936590)
chr4 (364-423)||(25140805-25140862)
chr4 (214-262)||(30060220-30060268)
[»] chr5 (97 HSPs)
chr5 (8-316)||(38871530-38871839)
chr5 (8-316)||(20891471-20891781)
chr5 (39-318)||(6156621-6156901)
chr5 (16-318)||(33487477-33487780)
chr5 (13-318)||(4064671-4064977)
chr5 (39-316)||(15799115-15799393)
chr5 (33-318)||(28083329-28083615)
chr5 (8-302)||(15957609-15957903)
chr5 (9-291)||(25746886-25747168)
chr5 (45-316)||(39524672-39524944)
chr5 (43-316)||(38692736-38693010)
chr5 (43-316)||(40619942-40620217)
chr5 (61-305)||(38372221-38372466)
chr5 (9-316)||(24203637-24203941)
chr5 (135-316)||(31221292-31221473)
chr5 (132-318)||(29862596-29862782)
chr5 (43-316)||(31929078-31929332)
chr5 (44-302)||(26190265-26190524)
chr5 (43-316)||(37183734-37184009)
chr5 (92-316)||(32841923-32842149)
chr5 (156-316)||(26095099-26095260)
chr5 (319-427)||(14112094-14112202)
chr5 (176-316)||(26093473-26093614)
chr5 (189-316)||(7884234-7884361)
chr5 (78-316)||(12465072-12465298)
chr5 (319-429)||(39525005-39525115)
chr5 (319-427)||(6156960-6157068)
chr5 (200-316)||(13908600-13908716)
chr5 (9-193)||(26318977-26319162)
chr5 (319-427)||(31928909-31929017)
chr5 (319-426)||(38692567-38692675)
chr5 (39-312)||(27212598-27212868)
chr5 (228-309)||(14111947-14112028)
chr5 (176-307)||(21070394-21070525)
chr5 (205-307)||(8738947-8739049)
chr5 (319-429)||(15957978-15958088)
chr5 (319-428)||(31221122-31221231)
chr5 (330-427)||(32841755-32841852)
chr5 (218-318)||(8739139-8739239)
chr5 (200-316)||(12847495-12847611)
chr5 (319-427)||(37183565-37183673)
chr5 (156-310)||(27158093-27158246)
chr5 (180-309)||(40613635-40613765)
chr5 (319-427)||(33487840-33487948)
chr5 (319-419)||(38372530-38372630)
chr5 (319-426)||(26898588-26898695)
chr5 (220-318)||(27494104-27494202)
chr5 (204-317)||(16429338-16429451)
chr5 (200-316)||(6800880-6800996)
chr5 (200-311)||(23269386-23269500)
chr5 (233-317)||(34530300-34530384)
chr5 (176-289)||(1350290-1350404)
chr5 (247-317)||(8973561-8973631)
chr5 (319-429)||(15799454-15799564)
chr5 (231-317)||(28445161-28445247)
chr5 (39-193)||(36359662-36359817)
chr5 (322-427)||(26190106-26190211)
chr5 (233-317)||(28445357-28445441)
chr5 (319-427)||(40619769-40619877)
chr5 (319-426)||(20891842-20891948)
chr5 (319-427)||(7884422-7884531)
chr5 (240-309)||(16429164-16429233)
chr5 (240-317)||(38641026-38641103)
chr5 (319-424)||(38871900-38872005)
chr5 (327-427)||(27212941-27213040)
chr5 (43-121)||(28108276-28108354)
chr5 (37-177)||(37095007-37095146)
chr5 (102-196)||(14111851-14111945)
chr5 (231-316)||(27493902-27493987)
chr5 (343-427)||(12464902-12464986)
chr5 (200-316)||(18514854-18514970)
chr5 (200-316)||(41639446-41639562)
chr5 (319-393)||(24203501-24203576)
chr5 (327-427)||(28083160-28083262)
chr5 (231-317)||(34530117-34530202)
chr5 (350-427)||(11185971-11186048)
chr5 (366-427)||(16429255-16429316)
chr5 (240-317)||(38640818-38640895)
chr5 (364-426)||(28445284-28445345)
chr5 (8-193)||(38640578-38640766)
chr5 (174-316)||(41253326-41253468)
chr5 (132-193)||(34440717-34440778)
chr5 (367-423)||(5456333-5456389)
chr5 (343-427)||(26093712-26093796)
chr5 (247-306)||(4650194-4650253)
chr5 (364-427)||(43387944-43388006)
chr5 (364-414)||(8739079-8739129)
chr5 (282-316)||(26898756-26898790)
chr5 (211-316)||(11186128-11186233)
chr5 (240-317)||(43388018-43388094)
chr5 (43-121)||(43388217-43388298)
chr5 (211-316)||(5535397-5535501)
chr5 (94-196)||(8032217-8032319)
chr5 (200-241)||(14001737-14001778)
chr5 (200-243)||(4028003-4028047)
chr5 (238-274)||(8032330-8032366)
chr5 (391-427)||(27158385-27158421)
[»] scaffold0027 (2 HSPs)
scaffold0027 (43-315)||(141917-142189)
scaffold0027 (379-427)||(141778-141826)
[»] chr3 (98 HSPs)
chr3 (43-312)||(35142009-35142276)
chr3 (39-311)||(51540572-51540847)
chr3 (43-316)||(38977701-38977975)
chr3 (43-316)||(47739885-47740159)
chr3 (9-318)||(50716150-50716460)
chr3 (9-318)||(50796387-50796697)
chr3 (39-312)||(3902763-3903037)
chr3 (39-316)||(3352019-3352298)
chr3 (33-316)||(39149732-39150015)
chr3 (45-316)||(46622748-46623010)
chr3 (16-316)||(51258307-51258610)
chr3 (98-316)||(34821296-34821514)
chr3 (80-316)||(33438492-33438727)
chr3 (39-316)||(501094-501372)
chr3 (39-316)||(2358575-2358854)
chr3 (18-310)||(28872910-28873205)
chr3 (39-316)||(47301947-47302224)
chr3 (16-316)||(49096179-49096481)
chr3 (141-316)||(43472922-43473097)
chr3 (141-316)||(52777261-52777437)
chr3 (9-294)||(3937285-3937563)
chr3 (141-316)||(30721763-30721934)
chr3 (228-316)||(47123144-47123232)
chr3 (228-316)||(47130510-47130598)
chr3 (319-425)||(28873273-28873379)
chr3 (174-316)||(27143369-27143511)
chr3 (322-427)||(34821127-34821232)
chr3 (201-318)||(51492890-51493007)
chr3 (200-316)||(5127852-5127968)
chr3 (319-427)||(51258671-51258779)
chr3 (330-425)||(3902592-3902687)
chr3 (43-153)||(34821512-34821623)
chr3 (39-193)||(48303919-48304074)
chr3 (330-427)||(35142351-35142448)
chr3 (206-304)||(26053485-26053584)
chr3 (322-427)||(2358406-2358511)
chr3 (204-317)||(33842026-33842139)
chr3 (319-427)||(50716520-50716628)
chr3 (319-427)||(50796219-50796327)
chr3 (319-425)||(3351852-3351958)
chr3 (200-316)||(29035888-29036005)
chr3 (319-427)||(39150076-39150177)
chr3 (326-427)||(47302293-47302394)
chr3 (212-305)||(47979970-47980063)
chr3 (319-427)||(4394246-4394354)
chr3 (200-300)||(45712053-45712153)
chr3 (319-427)||(51540411-51540519)
chr3 (327-422)||(38977537-38977632)
chr3 (335-414)||(43472765-43472844)
chr3 (245-316)||(46624855-46624926)
chr3 (247-317)||(35345861-35345931)
chr3 (364-429)||(500968-501033)
chr3 (247-316)||(8735530-8735599)
chr3 (247-316)||(9087771-9087840)
chr3 (156-316)||(29048388-29048548)
chr3 (319-427)||(46622579-46622687)
chr3 (43-124)||(47123038-47123120)
chr3 (43-124)||(47130404-47130486)
chr3 (211-316)||(47769363-47769468)
chr3 (233-317)||(8735309-8735393)
chr3 (233-317)||(9087550-9087634)
chr3 (200-276)||(29035804-29035880)
chr3 (234-297)||(45244514-45244577)
chr3 (327-414)||(47739730-47739817)
chr3 (200-316)||(46555433-46555546)
chr3 (322-427)||(3938452-3938557)
chr3 (211-316)||(14828872-14828977)
chr3 (13-84)||(33700658-33700730)
chr3 (319-423)||(35345697-35345801)
chr3 (44-168)||(45244322-45244447)
chr3 (171-306)||(54229860-54229996)
chr3 (344-427)||(29048622-29048705)
chr3 (30-124)||(42936588-42936683)
chr3 (202-303)||(512214-512315)
chr3 (211-289)||(43420110-43420188)
chr3 (319-425)||(51816481-51816587)
chr3 (359-427)||(33439494-33439562)
chr3 (200-316)||(34010042-34010158)
chr3 (200-316)||(40062469-40062585)
chr3 (343-427)||(41300901-41300985)
chr3 (9-71)||(43473148-43473211)
chr3 (364-427)||(45244609-45244671)
chr3 (369-427)||(14828700-14828758)
chr3 (233-294)||(32025111-32025172)
chr3 (322-383)||(52777501-52777562)
chr3 (45-124)||(33701459-33701541)
chr3 (320-427)||(40062647-40062755)
chr3 (200-316)||(50384429-50384545)
chr3 (9-84)||(8735069-8735144)
chr3 (9-84)||(9087310-9087385)
chr3 (367-410)||(45711886-45711929)
chr3 (39-86)||(52777169-52777216)
chr3 (250-309)||(4300240-4300301)
chr3 (43-99)||(4394166-4394224)
chr3 (369-423)||(34009882-34009936)
chr3 (240-293)||(45244729-45244782)
chr3 (369-429)||(43471464-43471524)
chr3 (205-245)||(48549429-48549469)
[»] chr1 (78 HSPs)
chr1 (43-316)||(32817564-32817838)
chr1 (37-311)||(40650633-40650909)
chr1 (43-316)||(42545900-42546173)
chr1 (9-318)||(17000277-17000586)
chr1 (37-316)||(15069794-15070075)
chr1 (9-318)||(34162673-34162983)
chr1 (39-316)||(41584618-41584901)
chr1 (43-316)||(7011141-7011416)
chr1 (39-316)||(18583497-18583775)
chr1 (43-316)||(49677425-49677689)
chr1 (47-316)||(23442674-23442944)
chr1 (67-316)||(44573050-44573299)
chr1 (9-316)||(33611363-33611672)
chr1 (80-316)||(45046803-45047039)
chr1 (39-312)||(40907891-40908165)
chr1 (39-316)||(49786197-49786474)
chr1 (43-316)||(45567843-45568104)
chr1 (97-316)||(34006246-34006467)
chr1 (93-316)||(28866583-28866806)
chr1 (182-316)||(52744796-52744930)
chr1 (43-316)||(38885171-38885419)
chr1 (102-280)||(32542388-32542563)
chr1 (319-427)||(42546235-42546342)
chr1 (200-318)||(24472778-24472896)
chr1 (319-427)||(28866414-28866522)
chr1 (30-186)||(43319279-43319436)
chr1 (178-316)||(3561288-3561427)
chr1 (319-425)||(45046636-45046742)
chr1 (39-285)||(6223730-6223969)
chr1 (183-316)||(27794904-27795036)
chr1 (162-316)||(26723441-26723596)
chr1 (319-427)||(40907718-40907826)
chr1 (319-427)||(41584449-41584557)
chr1 (319-413)||(34006528-34006622)
chr1 (319-426)||(44572885-44572992)
chr1 (322-427)||(18583328-18583433)
chr1 (233-317)||(9445838-9445922)
chr1 (233-317)||(43318932-43319016)
chr1 (319-427)||(52744627-52744735)
chr1 (240-317)||(800544-800621)
chr1 (174-305)||(8704482-8704614)
chr1 (319-427)||(24472612-24472719)
chr1 (319-427)||(27795097-27795205)
chr1 (322-414)||(49786538-49786630)
chr1 (330-425)||(6223539-6223632)
chr1 (176-300)||(890579-890704)
chr1 (204-309)||(9446055-9446160)
chr1 (30-193)||(30829542-30829695)
chr1 (9-186)||(38950178-38950345)
chr1 (247-316)||(25563367-25563436)
chr1 (322-427)||(33611194-33611299)
chr1 (240-317)||(43319143-43319220)
chr1 (364-428)||(800676-800739)
chr1 (245-317)||(8364143-8364214)
chr1 (319-427)||(38885480-38885588)
chr1 (9-193)||(24471390-24471566)
chr1 (203-276)||(6099960-6100035)
chr1 (211-311)||(26230152-26230252)
chr1 (319-374)||(7011477-7011532)
chr1 (364-427)||(9445973-9446035)
chr1 (319-382)||(26723317-26723380)
chr1 (369-427)||(41584365-41584423)
chr1 (372-426)||(49677783-49677837)
chr1 (233-286)||(800781-800834)
chr1 (322-423)||(23443008-23443109)
chr1 (200-316)||(42928974-42929090)
chr1 (43-124)||(52744962-52745044)
chr1 (366-423)||(43319073-43319129)
chr1 (319-375)||(45567726-45567782)
chr1 (377-427)||(6099725-6099775)
chr1 (377-427)||(6099905-6099955)
chr1 (286-316)||(38159013-38159043)
chr1 (389-427)||(40650488-40650526)
chr1 (364-426)||(43318859-43318920)
chr1 (369-422)||(8704307-8704360)
chr1 (283-316)||(45880062-45880095)
chr1 (240-316)||(11844407-11844483)
chr1 (319-355)||(49677750-49677786)
[»] scaffold0508 (2 HSPs)
scaffold0508 (8-316)||(3348-3659)
scaffold0508 (322-427)||(3177-3283)
[»] scaffold0137 (2 HSPs)
scaffold0137 (39-316)||(9450-9728)
scaffold0137 (333-427)||(9282-9375)
[»] scaffold0182 (2 HSPs)
scaffold0182 (43-311)||(23055-23303)
scaffold0182 (378-427)||(23299-23348)
[»] scaffold0018 (1 HSPs)
scaffold0018 (319-426)||(174146-174253)
[»] scaffold0010 (3 HSPs)
scaffold0010 (245-316)||(140620-140691)
scaffold0010 (319-426)||(140752-140860)
scaffold0010 (43-114)||(140540-140612)
[»] scaffold0006 (2 HSPs)
scaffold0006 (230-301)||(59480-59551)
scaffold0006 (210-301)||(59938-60029)
[»] scaffold0016 (3 HSPs)
scaffold0016 (233-317)||(205758-205842)
scaffold0016 (368-427)||(205894-205952)
scaffold0016 (364-426)||(205684-205745)
[»] scaffold0014 (1 HSPs)
scaffold0014 (200-310)||(100872-100982)
[»] scaffold0564 (2 HSPs)
scaffold0564 (211-299)||(4472-4560)
scaffold0564 (372-426)||(4691-4745)
[»] scaffold0035 (1 HSPs)
scaffold0035 (207-241)||(18052-18086)


Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-113; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 28230729 - 28230421
Alignment:
Q  8 attttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggatt 107  Q
    |||||| || |||||| |||| |||||  | |||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  28230729 atttttcccgaaaatgcccttgagttttcggattttataatccagaatggtgttttcttttgttaaagggtaaaaaatgagtaacggatttttccggatt 28230630  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || ||||||||||||||       ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  28230629 ttgtaatccggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagt 28230530  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 307  Q
    || ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28230529 tcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatcc 28230430  T
Q  308 ttctgtttt 316  Q
    |||||||||    
T  28230429 ttctgtttt 28230421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 318
Target Start/End: Complemental strand, 24042445 - 24042139
Alignment:
Q  13 ttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttat 111  Q
    ||||||||||| |||| ||||||||||||| ||||| ||||||||||||||| |||| || ||| ||||||||| ||| |||| |||||||||||||| |    
T  24042445 ttccaaaaatgcccttgagtttctgaatttcataattcggaatggtgttttcctttgatatagggtgaaaaatggagttacgggtttttccggattttgt 24042346  T
Q  112 aatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcag 211  Q
    |||||||||||||       || |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  24042345 aatccggaaacttcaaaaaataaggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagttcgg 24042246  T
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||     
T  24042245 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatatcaatcttcctaactctcatccttcc 24042146  T
Q  312 gtttttg 318  Q
    |||||||    
T  24042145 gtttttg 24042139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 39 - 318
Target Start/End: Complemental strand, 42925872 - 42925592
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| |||| ||||||| |||||| ||||||||||||||       ||||||    
T  42925872 atttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttcctgattttgtaatccggaaacttcaaaaaatagggc 42925773  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    || |||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| | || ||||||||||    
T  42925772 gcattacatgatgttttcggattacataatccggaaaccccctaaacaccttttttcaaggtaaaacagttcggattatataatacgaactgtatcagca 42925673  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42925672 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgtttttg 42925592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 36468796 - 36468490
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattt 108  Q
    |||||| |||||||| |||| | ||||  ||||||||||| ||||||| |||||||||||||||||||   |||||||||||||||||||||||||||||    
T  36468796 tttttttcaaaaatgcccttgaatttccaaattttataattcggaatgatgttttcttttgttaaaggtgaaaaaatgagtaacggatttttccggattt 36468697  T
Q  109 tataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagtt 208  Q
    | ||||  ||||||||       ||||||| ||||||||||||||  | |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  36468696 tgtaatatggaaacttcaaaaaatagggcgtgttacatgatgtttcag-attacataatccggaaaccccctaaacaccctttttcaaggtaaaacagtt 36468598  T
Q  209 cagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 308  Q
       |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  36468597 tgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcataactctcatcct 36468498  T
Q  309 tctgtttt 316  Q
    ||||||||    
T  36468497 tctgtttt 36468490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 43 - 316
Target Start/End: Original strand, 3936040 - 3936314
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||| ||||||||||||||||||  ||||||| |||||||||| |||||||||||||| ||||||||||||||       ||||||||||    
T  3936040 tataatccggaatgatgttttcttttgttaaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgt 3936139  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  ||||||||||||||  |||||||||||||||| |||||||| |||||||||| |  |||||||||||| || ||||| ||||||||    
T  3936140 tacatgatgtttccggattacataatccaaaaaccccctaaacaccctttttcaaggtaaaacagtccgaattatataatccgaaatgtattagcacaaa 3936239  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3936240 ttgtaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctatttt 3936314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 37518522 - 37518248
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||||  |||| ||||||||||| ||||||| ||||||| | |||||||||||||||||||||||||||||| |||||||       ||||||| ||    
T  37518522 tataatccaaaatgatgttttcttttattaaagggtgaaaaaataagtaacggatttttccggattttataatccagaaacttcaaaaaatagggcgtgt 37518423  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| || |||||||||| |||    
T  37518422 tacatgaagtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagcataaa 37518323  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  37518322 ttctaaacatgtttgtaacagagatagtcattttaggaacactattaatcttcctaactctcatccttctgtttt 37518248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 9 - 316
Target Start/End: Original strand, 47202391 - 47202700
Alignment:
Q  9 ttttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggat 106  Q
    |||||| |||||||| |||| || |||| | |||| ||||||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||||| |||    
T  47202391 tttttttcaaaaatgcccttgaggtttccggatttcataatccggaatggtgttttcttttgttatagggtgaaaaatggagttacggatttttccagat 47202490  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    ||| ||||||| ||||||       ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||| || |||||| ||    
T  47202491 tttgtaatccgaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaatag 47202590  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    ||| ||||||||||||| || ||||||||||||||| |||||||| ||||||||||| |||| | ||||||||||||||||||||||||||||||| |||    
T  47202591 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccgttttagggacaatattaatcttcctaactcttatc 47202690  T
Q  307 cttctgtttt 316  Q
    ||| ||||||    
T  47202691 cttttgtttt 47202700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 36629101 - 36629409
Alignment:
Q  8 attttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgtttt-cttttgttaaaggatgaaaaa-tgagtaacggatttttccgga 105  Q
    |||||||||||||||| | || |||||| | ||||||||||  ||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||    
T  36629101 attttttccaaaaatgccattgagtttccggattttataatatggaatggtgtttttcttttgttagagggtgaaaaaatgagtaacggatttttccgga 36629200  T
Q  106 ttttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaaca 205  Q
    |||| ||||| || |||||       ||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||| || ||||||||    
T  36629201 ttttgtaatctggtaacttaaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccctctaaacaccattttttaaggtaaaaca 36629300  T
Q  206 gttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    |||| ||||||||||||| || ||||||||| |||||| ||||||||||||| |||||  | ||||||||||||| ||||||||||||||||||||||||    
T  36629301 gttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatg--tcgtcattttagggagaatattaatcttcctaactctcat 36629398  T
Q  306 ccttctgtttt 316  Q
    |||||||||||    
T  36629399 ccttctgtttt 36629409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 53 - 316
Target Start/End: Original strand, 36408314 - 36408577
Alignment:
Q  53 aatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatg 150  Q
    ||||||||||||||  |||||||| |||||||  ||||||||||||||||||||||||| |||||| |||||||       || |||||| |||||||||    
T  36408314 aatggtgttttctt--gttaaagggtgaaaaaaatgagtaacggatttttccggattttgtaatccagaaacttcaaaaaataaggcgcgatacatgatg 36408411  T
Q  151 tttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaaca 250  Q
    |||  ||||||||||||||||||||| | |||||||||| |||||| ||||||||||||  |||||||||||| || |||||||||||||||||||||||    
T  36408412 tttccggattacataatccggaaacctcataaacaccatctttcaaggtaaaacagttcgaattatataatccgaactgtatcagcacaaattctaaaca 36408511  T
Q  251 tgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||| | ||||||||||    
T  36408512 tgtttgtaacatggatagtaattttagggacaatattaatcttcttaactctctttcttctgtttt 36408577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 19225826 - 19225551
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggattttt-ccggattttataatccggaaacttnnnnnnntagggcgcg 140  Q
    |||||| || |||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||||||  ||||||       ||||| |||    
T  19225826 tataattcgaaatgatgttttcttttgttaaagggtgaaaaaatgagtaacggattttttccggattttgtaatccaaaaacttcaaaaaatagggtgcg 19225727  T
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||  ||||||| ||| ||||||||||||  ||  ||||||||||||    
T  19225726 ttacatgatgtttccggattacataatccggaaatcccctaaacaccatttttcaagataaaacaattcggattatataatctgaacggtatcagcacaa 19225627  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||||||||||||||    
T  19225626 attctaaacatgtttgtaacatggatattcattttatggatgatataaatcttcctaactctcatccttctgtttt 19225551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 158 - 316
Target Start/End: Original strand, 9151844 - 9152002
Alignment:
Q  158 attacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgt 257  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  9151844 attacataatccggaaaccccctaaacatcctttttcaaggtaaaacagtccagattatataatccgaactgtatcagcacaaattctaaacatgtttgt 9151943  T
Q  258 aacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9151944 aacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 9152002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 78 - 318
Target Start/End: Original strand, 8154866 - 8155107
Alignment:
Q  78 tgaaaaatga-gtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaacc 176  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||  ||||||||||||||| |||||    
T  8154866 tgaaaaatgaagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaacc 8154965  T
Q  177 ccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttta 276  Q
    ||||||||||| ||||| || |||||| ||||| |||||||||||| ||| | ||||||||||||| |||||||| ||||||||||| |||| |||||||    
T  8154966 ccctaaacacccttttttaaggtaaaatagttcggattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccatttta 8155065  T
Q  277 gggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    |||||||||| |||||||||| |||| |||||| ||||||||    
T  8155066 gggacaatatcaatcttcctagctcttatccttttgtttttg 8155107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 161 - 316
Target Start/End: Complemental strand, 42865210 - 42865055
Alignment:
Q  161 acataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaac 260  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||| | ||||||||||||| || ||||||||||||||||||||| |||||||||||    
T  42865210 acataatccggaaaccccctaaacaccccttttcaaggtaaaacagtccggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaac 42865111  T
Q  261 atggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42865110 atggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 42865055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 31642969 - 31643247
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| |||||| |||||||||||||| ||||||| ||| ||||||||| ||| ||||||||||| |||| || ||||  ||||||||       |||||     
T  31642969 atttcataatctggaatggtgttttcgtttgttatagggtgaaaaatggagttacggatttttctggatcttgtaatttggaaacttcaaaaaatagggt 31643068  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    | ||||||||||||||  |||||||||||||||||||||||| ||||||| ||||| || |||||| ||||| ||||||||||||  || || |||||||    
T  31643069 gtgttacatgatgtttccggattacataatccggaaaccccccaaacacccttttttaaggtaaaatagttcggattatataatctgaactggatcagca 31643168  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
     |||| |||||||| ||| ||||||| ||||  |||||||||||||||||||||||||||||||| |||||| ||||||    
T  31643169 taaatcctaaacatatttttaacatgtatagctattttagggacaatattaatcttcctaactcttatccttttgtttt 31643247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 10 - 316
Target Start/End: Complemental strand, 3305020 - 3304711
Alignment:
Q  10 tttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggatt 107  Q
    ||||| |||||||||| || || |||| | |||| |||||  |||||||||||||| ||||||| ||| ||||||||| ||| |||||||||||||||||    
T  3305020 ttttttcaaaaatgtctttgagatttccggatttcataatttggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggatt 3304921  T
Q  108 ttataatccggaaacttnnnnnnn-tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    || |||||| |||||||        ||||| | |||||||||| |||  ||||||||||||||  |||||||| ||||||| ||||  || |||||| ||    
T  3304920 ttgtaatccagaaacttcaaaaaaatagggtgtgttacatgatatttccggattacataatccaaaaaccccccaaacacccttttctaaggtaaaatag 3304821  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    ||| ||||||||||||| || ||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |||    
T  3304820 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttagggacaatattaatcttcctaactcttatc 3304721  T
Q  307 cttctgtttt 316  Q
     || ||||||    
T  3304720 attttgtttt 3304711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 43 - 316
Target Start/End: Original strand, 33151139 - 33151409
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttataatccggaaacttnnnnnnn-tagggcgc 139  Q
    |||||||  ||||| ||||||||||||||||||| |||||||  |||| |||||||||||   |||||| |||| |||||||||        ||||||||    
T  33151139 tataatctagaatgatgttttcttttgttaaagggtgaaaaaaatgaggaacggattttta--gattttgtaattcggaaacttaaaaaaaatagggcgc 33151236  T
Q  140 gttacatgatgtttatggattacataatccggaaaccccctaaacac-catttttcaaagtaaaacagttcagattatataatccaaattgtatcagcac 238  Q
     ||| ||||||| |  ||||||||||||||||||| ||||||||||| ||||||| || |||||||||||| ||||||||||| | || |||||||||||    
T  33151237 attatatgatgtcttcggattacataatccggaaatcccctaaacactcattttttaaggtaaaacagttcggattatataattcgaactgtatcagcac 33151336  T
Q  239 aaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||| ||||    
T  33151337 aaattctaaacatgtttgtaacatgaatag-----ttagggacaatattaatcttcctaactctcatccttctatttt 33151409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 50 - 221
Target Start/End: Original strand, 43737063 - 43737234
Alignment:
Q  50 cggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatga 148  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||    
T  43737063 cggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatga 43737162  T
Q  149 tgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataat 221  Q
    |||||  |||||||||||||||||||||||||||||||| ||||| || |||||| ||||| |||||||||||    
T  43737163 tgttttcggattacataatccggaaaccccctaaacacccttttt-aaggtaaaatagttcggattatataat 43737234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 132 - 316
Target Start/End: Complemental strand, 31985655 - 31985470
Alignment:
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagta-aaacagttcagattatataatccaaattgt 230  Q
    |||||||||||||||||| |||  |||||||||||| || | ||||| ||||||||||||||||| |   ||||||||| ||||||||||| | || |||    
T  31985655 tagggcgcgttacatgattttttcggattacataattcgaacaccccttaaacaccatttttcaagggggaaacagttcggattatataattcgaactgt 31985556  T
Q  231 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||| |||||||| ||||||| ||| ||||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  31985555 atcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatattaatctttctaactctcatcattctgtttt 31985470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 1518797 - 1518913
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||| ||||||||||||| || |||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  1518797 aaaacagttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatcttcttaac 1518896  T
Q  300 tctcatccttctgtttt 316  Q
    |||||||||||| ||||    
T  1518897 tctcatccttctatttt 1518913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 230 - 316
Target Start/End: Original strand, 19818500 - 19818586
Alignment:
Q  230 tatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19818500 tatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatccttctgtttt 19818586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 6467594 - 6467843
Alignment:
Q  10 tttttccaaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattt 108  Q
    |||||||||||||| |||| | ||||| | ||||||| || ||||||||||||||| ||||||||| | |||||||||||| ||||||||||||| |||     
T  6467594 tttttccaaaaatgcccttgaagtttccggattttatgattcggaatggtgttttcctttgttaaatggtgaaaaatgagttacggatttttccgaatta 6467693  T
Q  109 tataa--tccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa-ca 205  Q
    | |||  ||| ||||  |       ||||| | |||||||||| | |  ||||||||||||||| | |||||||||||||| |||||||| | |||| ||    
T  6467694 tgtaaaatccagaaatctcaaaaaatagggtgtgttacatgatttgttcggattacataatccgaacaccccctaaacaccctttttcaagggaaaaaca 6467793  T
Q  206 gttcagattatataatccaaattgtatcagcacaaattctaaacatgttt 255  Q
    |||| ||||||||||||| || |||||||||| ||||| |||||||||||    
T  6467794 gttcggattatataatccgaactgtatcagcataaattttaaacatgttt 6467843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 37518155 - 37518047
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| |||| |||||| |||||||||| | |||||||| ||||||||||||||||| |||    
T  37518155 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccatagaagagacttcttacaggactccgcccctcaaaatccaaaattccatc 37518056  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  37518055 gtttagacc 37518047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 42925532 - 42925424
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||||| |||    
T  42925532 tccgaaacttacccagaaaatcagaaacaattcaaggaccatgactcccttagaagggacttcttatgggactccgcccctcaaaatccaaaattccatc 42925433  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  42925432 gtttagacc 42925424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 156 - 316
Target Start/End: Complemental strand, 6467254 - 6467093
Alignment:
Q  156 ggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtt 254  Q
    |||||| | |||||| | |||| ||||||| |||||||||| | |||| || ||||||||||||||||| || | ||||| ||||| |||||||||||||    
T  6467254 ggattatagaatccgaacaccctctaaacatcatttttcaagggaaaaacaattcagattatataatccgaactatatcaacacaagttctaaacatgtt 6467155  T
Q  255 tgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||| ||||||||| |||||| || |||||||||| |||||||||||| ||||||| ||||    
T  6467154 tgtaatatggatagttattttaagggcaatattaattttcctaactctcttccttctatttt 6467093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 44 - 316
Target Start/End: Complemental strand, 33574265 - 33573996
Alignment:
Q  44 ataatccggaatggtgttttc-----ttttgttaaaggatgaaaaatga-gtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    ||||||||| |||||||||||     |||||||| ||  |||||||||| || | ||||||||  ||||||| ||||||||||||||       |||||     
T  33574265 ataatccgggatggtgttttcctttgttttgttatagagtgaaaaatgaagttatggatttttttggattttgtaatccggaaactttaaaaaatagggt 33574166  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||||||||||  ||||||||||||||| |||||||         |||||| || |||||| |||||  |||||||||||  || ||||| ||||    
T  33574165 gcgttacatgatgttttcggattacataatccgaaaacccc---------attttttaaggtaaaatagttcgaattatataatctgaactgtatgagca 33574075  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||  ||||||| ||||||||||| |||   ||||||||||||||||||||||| |||||||| |||||| ||||||    
T  33574074 caaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaactcttatccttttgtttt 33573996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 5278354 - 5278470
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||| ||||| ||||||||||||  || ||||| |||| ||||| | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  5278354 aaaatagttcggattatataatctgaactgtattagcataaattttgaacatgtttgtaacatggatagtcattttaaggataatattaatcttcctaac 5278453  T
Q  300 tctcatccttctgtttt 316  Q
    ||| |||||||||||||    
T  5278454 tcttatccttctgtttt 5278470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 42864985 - 42864885
Alignment:
Q  328 tccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagg-gacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| | ||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  42864985 tccccagaaaattagaaacaattcaaggaccatgactcccttagaaagagacttcttatgggactccgcccctcaaaatccaaaattcaatcgtttagac 42864886  T
Q  427 c 427  Q
    |    
T  42864885 c 42864885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 43737349 - 43737457
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    |||||||||| |||||||||| |||||||||||||||||||||| |||||||||||| |||||||  || |||||||| ||||||||| ||||||| |||    
T  43737349 tccgaaattttcccagaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttcttgtgggactccgcccctcaaaatctaaaattccatc 43737448  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  43737449 gtttagacc 43737457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 19225490 - 19225384
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||| |||| ||||||| ||||||||| | |||||||| ||||||||||||||||| |||    
T  19225490 tccgaaacttccccagaaaatcagaaaaaattcaaggaacatgactcccatagaaggaacttcttacaggactccgcccctcaaaatccaaaattccatc 19225391  T
Q  419 gtttaga 425  Q
    |||||||    
T  19225390 gtttaga 19225384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 24690392 - 24690287
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    ||||||||||||  || |||||||||| ||||| ||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||     
T  24690392 gattatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatggacaatattaatctacctaactctcatccttt 24690293  T
Q  311 tgtttt 316  Q
    ||||||    
T  24690292 tgtttt 24690287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 19818647 - 19818754
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| ||||| || ||| ||||||||||||| |||    
T  19818647 tccgaaactttcccagaaaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcttacgggactccacccctc-aaatccaaaattccatc 19818745  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  19818746 gtttagacc 19818754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 427
Target Start/End: Original strand, 47202762 - 47202862
Alignment:
Q  327 ttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    ||||||| ||||| |||||||||||||||||||||| |||| |||||||||||||||| || |||||||| ||||||||||||||||| || ||||||||    
T  47202762 ttccccaaaaaatcagaaaaaattcaaggaccatgactcccatagaagggacttcttaagggactccgcccctcaaaatccaaaattccattgtttagac 47202861  T
Q  427 c 427  Q
    |    
T  47202862 c 47202862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 36629470 - 36629577
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||  |  |||||||||||||||| |||    
T  36629470 tccgaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcttacgggactccatccttcaaaatccaaaattccatc 36629569  T
Q  419 gtttagac 426  Q
    ||||||||    
T  36629570 gtttagac 36629577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 316
Target Start/End: Complemental strand, 36946381 - 36946245
Alignment:
Q  180 taaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagg 278  Q
    |||||||| |||||||| | |||| || ||| |||||||||| || || |||||||||||||||||| || |||||||||||||| ||| ||||||||      
T  36946381 taaacaccttttttcaagggaaaaacaattcggattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcatttta-a 36946283  T
Q  279 gacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  36946282 gacaatattaagcttcctaactctcatccttttgtttt 36946245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 48776268 - 48776175
Alignment:
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    ||||||||||||||||| ||| |||||||||| | ||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  48776268 attatataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcat 48776175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 9152082 - 9152166
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  9152082 aaaaaaatcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacc 9152166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 24042088 - 24041981
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| |||  |||  |||||||||||||| |||||||| |||||||||||||| || |||    
T  24042088 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcctgtagt-gggacttcttacgggactccgcccctcaaaatccaaaactccatc 24041990  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  24041989 gtttagacc 24041981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 16983832 - 16983693
Alignment:
Q  180 taaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagg 278  Q
    ||||||||||||||||  | |||| |||||| ||||||||||||  ||||||||||||||||||| |     |||||||||||||||||  || ||||      
T  16983832 taaacaccatttttcagggaaaaaacagttcggattatataatctgaattgtatcagcacaaattttgggtctgtttgtaacatggataaccagtttaca 16983733  T
Q  279 gacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  16983732 gacaatattaatcttcctaactctcatccttctatttttg 16983693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 215 - 305
Target Start/End: Original strand, 43185887 - 43185977
Alignment:
Q  215 atataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||||||| |||||||  ||||||||||||  ||||||||||||||    
T  43185887 atataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcat 43185977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 8214355 - 8214242
Alignment:
Q  204 cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctc 303  Q
    |||||| |||||  |||| |||| || |||| ||| |||||| |||||||||| |||||||||||||||| || ||||||||||||||||||||||||||    
T  8214355 cagttcggattacgtaattcaaactgcatcaacaccaattctgaacatgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactctc 8214256  T
Q  304 atccttctgttttt 317  Q
    ||| || |||||||    
T  8214255 atcattgtgttttt 8214242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 322 - 427
Target Start/End: Original strand, 8155169 - 8155274
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||| | ||||| |||||||||||||||| ||||| |||| || |||| ||||||||||| |||||||| ||||||||||||||||| || |||    
T  8155169 gaaacttcccaaaaaaatcagaaaaaattcaaggatcatgactcccgtacaaggaacttcttacgggactccgcccctcaaaatccaaaattccattgtt 8155268  T
Q  422 tagacc 427  Q
    ||||||    
T  8155269 tagacc 8155274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 322 - 427
Target Start/End: Original strand, 31643310 - 31643415
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| |||| || ||||| |||||||||||||||||||||| |||||||||||| |||||||| || ||||| || ||||||||||||||||| ||  ||    
T  31643310 gaaacttccgcaaaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttcttatgggactccacccctcaaaatccaaaattccattatt 31643409  T
Q  422 tagacc 427  Q
    ||||||    
T  31643410 tagacc 31643415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 8214552 - 8214453
Alignment:
Q  218 taatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    ||||||||| || | ||| || |||| | |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  8214552 taatccaaactgcaccagaacgaattatgaacatgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcatcctcgtgttttt 8214453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 33151480 - 33151543
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactcc 393  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  33151480 cccagaaaatcagaaaaaattcaaggaccatgactcccttagaagggacttcttacgggactcc 33151543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 305
Target Start/End: Original strand, 48775711 - 48775803
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    ||||||||||||| || |||||  ||||||||| |||||||| |||||||||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  48775711 gattatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaactatcat 48775803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 43 - 165
Target Start/End: Complemental strand, 42877272 - 42877149
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||||  |||||||||||||| ||||| ||||| |        ||||||||||    
T  42877272 tataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgtgtttttccggattttgtaatcgggaaaataaaaaaaatagggcgcgt 42877173  T
Q  142 tacatgatgtttatggattacata 165  Q
    ||||| ||||||  ||||||||||    
T  42877172 tacataatgtttccggattacata 42877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 3304619 - 3304535
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| ||||||||||||| |||  ||||||||||||||||||| |||||||| ||||||||||||||||  || |||||||||    
T  3304619 aaaaaaatcaaggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagacc 3304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 424
Target Start/End: Original strand, 43186078 - 43186157
Alignment:
Q  345 aaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttag 424  Q
    |||| ||||||| || || |||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||    
T  43186078 aaaaatcaaggatcaagactcccttagaagggacttcttacgggactccgcccctaaaaatccaaaattccatcgtttag 43186157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 43737233 - 43737288
Alignment:
Q  261 atggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  43737233 atggatagtcattttagggacaatattaatcttcctaactctgatccttatgtttt 43737288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 7115159 - 7115053
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaat-tcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgt 420  Q
    |||| |||| |||||||| ||||||||  ||||||| || || |||||||||||||||||||||||| |||||  | ||||||||||||||||| || ||    
T  7115159 gaaacttcctcagaaaatcagaaaaaaaatcaaggatcaagactcccttagaagggacttcttacgggactccttccctcaaaatccaaaattccattgt 7115060  T
Q  421 ttagacc 427  Q
    |||||||    
T  7115059 ttagacc 7115053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 315
Target Start/End: Complemental strand, 25613209 - 25613067
Alignment:
Q  174 accccctaaacaccatttttcaaagtaaa-acagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 272  Q
    ||||||||||||||||| ||||  | ||| ||||||| ||||||| ||| |||| |||||||||| ||||||| ||  |  ||||||||||||||| ||     
T  25613209 accccctaaacaccattattcaggggaaagacagttcggattataaaattcaaactgtatcagcataaattcttaaatttcttgtaacatggatagccaa 25613110  T
Q  273 tttagggacaatattaatcttcctaactctcatccttctgttt 315  Q
    |||| ||   |||||||||||| |||||| |||||||||||||    
T  25613109 tttacgggtcatattaatcttcataactcacatccttctgttt 25613067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 16278236 - 16278313
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||||| || | |||| ||||||| |||||||    
T  16278236 aattcttaatatgtttgtaacatggatagtcattttaaggacaatattaatcatctttactcccatccttgtgttttt 16278313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 36468429 - 36468323
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| ||||||  ||| ||||||| || ||||||  |||||||||||||||| |||||||| ||||| || |||||||  |||    
T  36468429 tccgaaacttccccagaaaatcagaaaa--ttcgaggaccacgactccctttaaagggacttcttacgggactccgcccctcaagattcaaaatttcatc 36468332  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  36468331 gtttagacc 36468323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 24690225 - 24690122
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||| ||| ||||| |||||||||||||||| ||||| ||||||   ||||||||||||| | |||   || |||||||||||||||||||||    
T  24690225 tccgaaacttctccataaaatcagaaaaaattcaaggatcatgactccctt---agggacttcttacaggactttacccctcaaaatccaaaattcaatc 24690129  T
Q  419 gtttaga 425  Q
    |||||||    
T  24690128 gtttaga 24690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 31985393 - 31985301
Alignment:
Q  335 aaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||| |||||||| ||||||| ||||| || | ||||||||| ||||||| | |||| ||| |||||| |||||||||||||||||||||||    
T  31985393 aaaatcagaaaaaactcaaggatcatgactctcatagaagggatttcttacaggactctgcccctcaaactccaaaattcaatcgtttagacc 31985301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 132 - 318
Target Start/End: Complemental strand, 7115408 - 7115221
Alignment:
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgt 230  Q
    ||||| ||||||| |||| |||  | |||| |||||| | |||||||||||||||||||||| |  | |||| || ||| ||||||||||| |  |  ||    
T  7115408 tagggtgcgttacttgattttttcgaattatataatctgaaaaccccctaaacaccatttttaaggggaaaaacaattcggattatataattcggaccgt 7115309  T
Q  231 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    |||| |||||||| | |   ||||| |||||||||||  || |||| ||||||||||||||||  |||||||||||||||| ||||||    
T  7115308 atcaacacaaattttgagtttgtttctaacatggataaccaatttatggacaatattaatcttgataactctcatccttctatttttg 7115221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 28346067 - 28346161
Alignment:
Q  30 agtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataatccggaaactt 124  Q
    ||||||||||||| |||||| |||||| ||||||| ||||||||||    |||||||||| |||||| |||||| ||||| |||||| |||||||    
T  28346067 agtttctgaatttcataatctggaatgatgttttcctttgttaaagagaaaaaaatgagttacggatgtttccgaattttgtaatccagaaactt 28346161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 5731005 - 5730928
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    ||||||||||||||||||| |||| ||||||||||||   |||||||||||||| ||||||||||  ||| |||||||    
T  5731005 aattctaaacatgtttgtagcatgaatagtcattttaaatacaatattaatctttctaactctcaatcttgtgttttt 5730928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 309
Target Start/End: Complemental strand, 5731214 - 5731145
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 309  Q
    |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||| || || ||||||||    
T  5731214 aattctgaacatgtttataacatggatagtcatttgaaggacaatattaatcttcttagctttcatcctt 5731145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 28230368 - 28230276
Alignment:
Q  335 aaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||| ||||||||| |||||||||||| |||||||||| |  ||| ||| || ||||| || ||||||||| ||||||| ||||||||||||    
T  28230368 aaaatcagaaaaaatacaaggaccatgactcccttagaaagaccttattatgggactccacccctcaaaatctaaaattccatcgtttagacc 28230276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 16278325 - 16278388
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||||||||||||||||| |||||||   |||||||||||||||  ||||||||||||    
T  16278325 tcccttagaagggacttcttacgggactccgcacatcaaaatccaaaatttcatcgtttagacc 16278388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 427
Target Start/End: Complemental strand, 33573889 - 33573832
Alignment:
Q  370 agaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||||||||||| |||||||| ||||||||||||||||  || |||||||||    
T  33573889 agaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagacc 33573832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 5731125 - 5731062
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacca 428  Q
    |||||||||||||||||||||||  ||||| || ||||||||||||||||| ||| |||||||||    
T  5731125 tcccttagaagggacttcttacgagactccacc-ctcaaaatccaaaattccatcatttagacca 5731062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 16278423 - 16278475
Alignment:
Q  218 taatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtc 270  Q
    ||||||||| ||||||||||| |||||| ||||||||| ||||||||||||||    
T  16278423 taatccaaactgtatcagcaccaattctgaacatgtttctaacatggatagtc 16278475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 424
Target Start/End: Complemental strand, 47239561 - 47239505
Alignment:
Q  368 ttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttag 424  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||  |||||||||    
T  47239561 ttagaagggacttcttacgggacttcgcctctcaaaatccaaaatttcatcgtttag 47239505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 8214441 - 8214378
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||||||||||||||||  ||| |||| |||| |||||||||||| ||| ||||||||    
T  8214441 tcccttagaagggacttcttacgagacttcgcccctcacaatccaaaattccatcttttagacc 8214378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 174 - 316
Target Start/End: Original strand, 39581802 - 39581945
Alignment:
Q  174 accccctaaacaccatttttcaaagta-aaacagttcagattatataatccaaattgtatcagcaca--aattctaaacatgtttgtaacatggatagtc 270  Q
    ||||| |||||||| |||||||| | | ||| | ||||||||||||||||| || ||||||||||||  |||| |||   ||||||||||||| |||  |    
T  39581802 accccataaacaccctttttcaagggagaaataattcagattatataatccgaactgtatcagcacacaaattataagtttgtttgtaacatgaataacc 39581901  T
Q  271 attttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    | ||||  |||  ||||||||||| |||||||||| ||||||||||    
T  39581902 aatttaaagac--tattaatcttcataactctcattcttctgtttt 39581945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 47239699 - 47239630
Alignment:
Q  175 ccccctaaacaccatttttca-aagtaaaacagttcagattatataatccaaattgtatcagcacaaatt 243  Q
    ||||| ||||||||||||||| | | |||||||||| |||||||||| ||||| |||||||||| |||||    
T  47239699 cccccaaaacaccatttttcagaggaaaaacagttcggattatataacccaaactgtatcagcataaatt 47239630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 9151784 - 9151828
Alignment:
Q  80 aaaaatgagtaacggatttttccggattttataatccggaaactt 124  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||    
T  9151784 aaaaatgagtaacaggtttttccggattttgtaatccggaaactt 9151828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 427
Target Start/End: Complemental strand, 48705847 - 48705783
Alignment:
Q  363 atcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||| ||||||||||||||||  | |||||||| |||||| |||||||||  ||||||||||||    
T  48705847 atcccgtagaagggacttcttataggactccgcccctcaaattccaaaatttcatcgtttagacc 48705783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 425
Target Start/End: Original strand, 1519005 - 1519087
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttaga 425  Q
    |||||| ||||||| || || |||| ||||||||||||| || |  |||||||  ||||||||| ||||||| ||||||||||    
T  1519005 aaaaaaatcaaggatcaagattcccgtagaagggacttcctatgtgactccgctcctcaaaatctaaaattccatcgtttaga 1519087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 28349346 - 28349229
Alignment:
Q  8 attttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggat 106  Q
    ||||||| |||||||  ||||  ||||| | |||| |||||| | |||||||||||  ||||||||| | || |||||||||| ||| ||||||| | ||    
T  28349346 atttttttcaaaaatacccttacgtttccggatttcataatcggaaatggtgtttttctttgttaaatggtgaaaaaatgagttacgaatttttctgaat 28349247  T
Q  107 tttataatccggaaactt 124  Q
    ||| ||||||| ||||||    
T  28349246 tttgtaatccgaaaactt 28349229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 30861362 - 30861458
Alignment:
Q  333 agaaaattagaaaaaat--tcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||| |||||||||  || |||| || |||||| |||||||||||||||||| | | ||| || ||| |||| |||||||  ||||||||||||    
T  30861362 agaaaatcagaaaaaataatcgaggatcaagaatcctttagaagggacttcttacaggattcctcccctcgaaattcaaaatttcatcgtttagacc 30861458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 37398877 - 37398844
Alignment:
Q  283 atattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||| |||||||||    
T  37398877 atattaatcttcctaactctcatcattctgtttt 37398844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 26554995 - 26554947
Alignment:
Q  379 ttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| || |||| ||| ||||||||||||||||| ||||||||||||    
T  26554995 ttcttatgggactctgcccctcaaaatccaaaattccatcgtttagacc 26554947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 26555178 - 26555130
Alignment:
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccct 180  Q
    |||||||||||||||||| ||| |||||||| ||||||| | |||||||    
T  26555178 tagggcgcgttacatgatttttttggattacctaatccgaacaccccct 26555130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 44465950 - 44465675
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||       ||||||||||    
T  44465950 tataatccagaatgatgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgt 44465851  T
Q  142 tacatgat-gtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| || |||||||||||||    
T  44465850 tacatgatagtttatggattacatactccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaaatgtatcagcacaa 44465751  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44465750 attctaaacatgtttgtaacatggttagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 44465675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 32188092 - 32187817
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcg 140  Q
    |||||||||||||| ||||||||||||||||||| |||||||  |||||||||| |||||| ||||||| ||||| ||||||||       ||||||| |    
T  32188092 tataatccggaatgatgttttcttttgttaaagggtgaaaaaaatgagtaacgggtttttctggattttgtaatctggaaacttcaaaaaatagggcgag 32187993  T
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||||||||||||  |||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||    
T  32187992 ttacatgatgtttccggattacataatccggaaacccccgaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaa 32187893  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32187892 attttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 32187817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 15995370 - 15995061
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggatt 107  Q
    |||| |||||||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||||    
T  15995370 ttttctccaaaaatgccctttagttttcggattttataatccggaatggtgttttcttttgttaaagggtgaaaaaattagtaacgggtttttccggatt 15995271  T
Q  108 ttataatccggaaacttnnnnnnn-tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    || ||||| ||||||||        ||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  15995270 ttgtaatcgggaaacttcaaaaaaatagggcgcgttgcatgatgtttccggattacataatccgaaaaccccctaaacaccctttttcaagctaaaacag 15995171  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    ||| ||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  15995170 ttcggattatataattcgaactgtatcagcaaaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatctttctaactctcatc 15995071  T
Q  307 cttctgtttt 316  Q
     |||||||||    
T  15995070 attctgtttt 15995061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 33452665 - 33452391
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||||| |||| ||||||||||||||||||| || |||||||||||||||||||||| ||||||| |||| |||||||||       ||||||||||    
T  33452665 tataatccgaaatgatgttttcttttgttaaagggtggaaaaatgagtaacggatttttctggattttgtaattcggaaacttcaaaaaatagggcgcgt 33452566  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  |||| ||||||||||||||| ||||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| ||||||||    
T  33452565 tacatgatgtttccggatcacataatccggaaactccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtattagcacaaa 33452466  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  33452465 ttctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcattcttttgtttt 33452391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 45154013 - 45153739
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||||||| |||||| | ||||| ||||| ||||||||       ||||||||||    
T  45154013 tataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttctgaattttgtaatctggaaacttcaaaaaatagggcgcgt 45153914  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||   || |||||||||||||     
T  45153913 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagtttagattatataatttgaactgtatcagcacaag 45153814  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45153813 ttataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcttaactctcatccttctgtttt 45153739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 58 - 314
Target Start/End: Complemental strand, 17475006 - 17474749
Alignment:
Q  58 tgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatg 156  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||  |    
T  17475006 tgttttcttttgttaaaaggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaactttaaaaaatagggcgcgttacatgatgtttccg 17474907  T
Q  157 gattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttg 256  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||  ||||||||||||| || |||||||||||||||| ||||||||||||    
T  17474906 gattacataatccggaaaccccctaaacacaatttttcaaggtaaaacagtttggattatataatccgaactgtatcagcacaaattttaaacatgtttg 17474807  T
Q  257 taacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtt 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  17474806 taacatggatagtcattttagagacaatattaatcttcctaactctcataattctgtt 17474749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 41510651 - 41510377
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcg 140  Q
    ||||||||| |||||||||||||||||| ||||| |||||||  |||||||||||||||||| |||||  ||||||||||||||       |||||||||    
T  41510651 tataatccgaaatggtgttttcttttgtaaaagggtgaaaaaaatgagtaacggatttttccagatttcgtaatccggaaacttcaaaaaatagggcgcg 41510552  T
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||  ||||||| |||||||||| | ||||||||||||  || |||||||||||||    
T  41510551 ttacatgatgtttctggattacataatctggaaaccccctaaacaccccttttcaaggtaaaacagtccggattatataatctgaactgtatcagcacaa 41510452  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41510451 tttctaaacatgtttgtaacat-gatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 41510377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 50 - 316
Target Start/End: Original strand, 39447101 - 39447368
Alignment:
Q  50 cggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatga 148  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||||       |||||||| ||||||||    
T  39447101 cggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaatagggcgcattacatga 39447200  T
Q  149 tgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaa 248  Q
    |||||  ||||||||||||| ||||||||| |||||||| |||||||| |||||| ||||| ||||||||||| |||| |||||||||||||||||||||    
T  39447201 tgttttcggattacataatctggaaaccccataaacaccctttttcaaggtaaaatagttcggattatataattcaaactgtatcagcacaaattctaaa 39447300  T
Q  249 catgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  39447301 catgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatccttctatttt 39447368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 39 - 316
Target Start/End: Complemental strand, 36949171 - 36948893
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| ||||||||||||||||||| ||||| | ||||||       ||||||    
T  36949171 atttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatctgcaaacttcaaaaaatagggc 36949072  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| | || |||||| ||||  |||||||||||||||| ||||||||||    
T  36949071 gcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttgttaaggtaaaatagtttggattatataatccaaactgtatcagca 36948972  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||| |||||||| ||| ||||||| ||||  |||||||||||||||||||||||||||||||| |||||| ||||||    
T  36948971 caaatcctaaacatatttataacatgtatagctattttagggacaatattaatcttcctaactcttatccttttgtttt 36948893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 102 - 316
Target Start/End: Original strand, 42894369 - 42894583
Alignment:
Q  102 cggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaa 201  Q
    |||||| ||||||||||||||||       |||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  42894369 cggattatataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaa 42894468  T
Q  202 aacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 301  Q
    |||||| | ||||||||| ||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  42894469 aacagtccggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaactc 42894568  T
Q  302 tcatccttctgtttt 316  Q
    || ||||||||||||    
T  42894569 tcttccttctgtttt 42894583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 102 - 316
Target Start/End: Original strand, 36874977 - 36875191
Alignment:
Q  102 cggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaa 201  Q
    |||||||| ||||||||||||||       |||| |||||||||||||||||  |||||||||||||||||||||| || ||||||||||||||| ||||    
T  36874977 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccatttttcaaggtaa 36875076  T
Q  202 aacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 301  Q
    |||||| | |||||||||||||||| ||||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36875077 aacagtccggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaactc 36875176  T
Q  302 tcatccttctgtttt 316  Q
    |||||||||||||||    
T  36875177 tcatccttctgtttt 36875191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 13 - 318
Target Start/End: Complemental strand, 25218042 - 25217721
Alignment:
Q  13 ttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttat 111  Q
    |||||||||| || || |||||||| ||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||| |    
T  25218042 ttccaaaaatatctttgagtttctggattttataatccgcaatgatgttttcttttgttaaagggtgaaaaaatgagtaacggattttttcggattttgt 25217943  T
Q  112 aatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcag 211  Q
    |||||||||||||       ||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||  ||||||| |||||||||||| |    
T  25217942 aatccggaaacttcaaaaaatagggtgcgttacatgatgtttccggattacataatccggaaa-cccctaaacaccccttttcaaggtaaaacagttcgg 25217844  T
Q  212 attatataat----------------ccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcc 295  Q
    ||||||||||                |  || ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||    
T  25217843 attatataattgtagataatataatccggaactgtattagcacaaattctaaacatgtttgtagcatggatagtcattttggggacaattttaatcttcc 25217744  T
Q  296 taactctcatccttctgtttttg 318  Q
    |||||||| ||||||||||||||    
T  25217743 taactctcttccttctgtttttg 25217721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 41855111 - 41854852
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||           ||||||||||||||       ||||| | ||    
T  41855111 tataatccggaatggtgttttctgttgttaaagggtgaaaaaatgagtaacggattttg----------taatccggaaacttcaaaaaatagggtgtgt 41855022  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||   || ||||||||||||||    
T  41855021 tacatgatgtttccggattacatgatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatttgaactgtatcagcacaaa 41854922  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||     |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41854921 ttctaaacatgtttgtaa-----atagtcatttcagggacaatattaatcttcctaactctcatccttctgtttt 41854852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 142 - 316
Target Start/End: Complemental strand, 41203309 - 41203134
Alignment:
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaa-agtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    ||||| || ||| |||||||||||||||| | ||||| |||||||| ||||| || || ||||||||||||||||||||| || || |||||||||||||    
T  41203309 tacataatttttctggattacataatccgaacaccccgtaaacaccctttttaaagagaaaaacagttcagattatataaaccgaactgtatcagcacaa 41203210  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41203209 attttaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactttcatccttctgtttt 41203134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 132 - 316
Target Start/End: Original strand, 34517123 - 34517307
Alignment:
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgt 230  Q
    |||||||||||||||||| |||  ||||||||||||||  | ||||| ||||||||||||||||| | |||| |||||  ||||||||||||| || |||    
T  34517123 tagggcgcgttacatgatttttc-ggattacataatccaaataccccttaaacaccatttttcaagggaaaaacagtttggattatataatccgaactgt 34517221  T
Q  231 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| | |||||||||||| || ||||| |||||||| ||||||    
T  34517222 atcagcacaaattctaaacatgtcggtaacatggatagtcattttatgaacaatattaatcatcataactttcatccttttgtttt 34517307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 44 - 316
Target Start/End: Original strand, 5507349 - 5507625
Alignment:
Q  44 ataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgtt 142  Q
    |||||||| | | |||||||| ||||||| | | ||||||| ||||| || ||||||| || ||||| ||||||  ||||||       || | ||||||    
T  5507349 ataatccgaactagtgttttcctttgttatatggtgaaaaaatgagttacagattttttcgaattttgtaatccaaaaacttcaaaaaataagacgcgtt 5507448  T
Q  143 acatgatgtttat--ggattacataatccggaaaccccctaaacaccatttttcaaagtaaaac-agttcagattatataatccaaattgtatcagcaca 239  Q
    ||||||| ||| |  |||||| |||||||| | |||||||||||||| ||| | || | ||||  ||||| ||||||||||||| || ||||||||||||    
T  5507449 acatgattttttttcggattatataatccgaacaccccctaaacaccttttcttaaggaaaaaatagttcggattatataatccgaactgtatcagcaca 5507548  T
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||  ||||||||| ||||||||||    
T  5507549 aattctaaacatgtttgtaacatggatagtcattttataaacaatattaatcttcacaactctcattcttctgtttt 5507625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 42894644 - 42894752
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||| |||    
T  42894644 tccgaaacttccccagaaaattagaaaaaattcaaggaccatgactcccttagaaggaacttcttacgggactccgcccctcaaaatccaaaattccatc 42894743  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  42894744 gtttagacc 42894752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 8388741 - 8388857
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||||||||||||||||    
T  8388741 aaaacagttcagattatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatcttcctaac 8388840  T
Q  300 tctcatccttctgtttt 316  Q
    ||||||||||| |||||    
T  8388841 tctcatccttcagtttt 8388857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 44465627 - 44465519
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||    
T  44465627 tccgaaatttccccagaaaatcagaaaaaattcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatc 44465528  T
Q  419 gtttagacc 427  Q
     ||||||||    
T  44465527 ttttagacc 44465519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 146 - 318
Target Start/End: Original strand, 30763679 - 30763857
Alignment:
Q  146 tgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaa-gtaaaacagttcagattatataatccaaattgtatcagcacaaattc 244  Q
    |||| ||| ||||||| |||||||| | ||||  |||||||||||||||||| | |||||||||| ||||||||| |||||||||||||| || ||||||    
T  30763679 tgatttttttggattatataatccgaacaccct-taaacaccatttttcaaaagaaaaacagttctgattatatattccaaattgtatcaacataaattc 30763777  T
Q  245 taaacatgtttg----ta--acatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    ||||||| ||||    ||  |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  30763778 taaacatttttggtgttaacacatagatagtcattttatggacaatattaatcttcctaactctcatctttctgtttttg 30763857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 17474682 - 17474577
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||||||  ||||||||||| |||||||| ||||||||||||||||| ||||||    
T  17474682 gaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaagaaacttcttacgggactccgcccctcaaaatccaaaattccatcgtt 17474583  T
Q  422 tagacc 427  Q
    ||||||    
T  17474582 tagacc 17474577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 333 - 427
Target Start/End: Complemental strand, 25217647 - 25217553
Alignment:
Q  333 agaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  25217647 agaaaatcagaaaaaattcaaggaccatgactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagacc 25217553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 174 - 309
Target Start/End: Complemental strand, 19110105 - 19109970
Alignment:
Q  174 accccctaaacaccatttttcaaagtaaaaca-gttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 272  Q
    |||||||||||||| |||||||| | ||||   |||| |||||||||||||||| | |||||||||||||| |||| || |||||||||||||| |||||    
T  19110105 accccctaaacaccctttttcaagggaaaaattgttc-gattatataatccaaactatatcagcacaaattttaaatatctttgtaacatggatcgtcat 19110007  T
Q  273 tttagggacaatattaatcttcctaactctcatcctt 309  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  19110006 tttaaggataatattaatcttcctaactctcatcctt 19109970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 16750485 - 16750377
Alignment:
Q  206 gttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    |||| ||||||||||| | || |||||||||| |||||||||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  16750485 gttcggattatataattcgaactgtatcagcataaattctaat-atgtttgtaatatggatagtcattttaggaacaatattaatctt-ctaactctcat 16750388  T
Q  306 ccttctgtttt 316  Q
    |||||||||||    
T  16750387 ccttctgtttt 16750377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 17766889 - 17766776
Alignment:
Q  204 cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctc 303  Q
    |||||| ||||| |||||| ||| |  |||| ||| |||| | |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  17766889 cagttcggattacataatctaaacttcatcaacaccaattttgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctc 17766790  T
Q  304 atccttctgttttt 317  Q
    |||||| |||||||    
T  17766789 atccttgtgttttt 17766776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 41510316 - 41510208
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||| || ||||||||| |||||||| || ||||| || ||||||||||||||||  |||    
T  41510316 tccgaaacttccctagaaaatcagaaaaaattcaaggaccatgactctcttagaaggaacttcttatgggactccacccctcaaaatccaaaatttcatc 41510217  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  41510216 gtttagacc 41510208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 33452330 - 33452221
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaat-tcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaat 417  Q
    ||||||| || |||||||||| ||||||||  ||||||||||||| |||| || ||| |||||||||||| |||||||| ||||||||||||||||| ||    
T  33452330 tccgaaactttcccagaaaatcagaaaaaaaatcaaggaccatgactcccataaaagcgacttcttacgggactccgcccctcaaaatccaaaattccat 33452231  T
Q  418 cgtttagacc 427  Q
    ||||||||||    
T  33452230 cgtttagacc 33452221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 34519561 - 34519484
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  34519561 aattctgaacatgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcatccttatgttttt 34519484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 38308716 - 38308611
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||| || |||  | |||||||| ||||||||||||||||| || |||    
T  38308716 gaaacttccccagaaaatcagaaaaaattcaaggatcatgactcccttagaagggaatttttattggactccgcccctcaaaatccaaaattccattgtt 38308617  T
Q  422 tagacc 427  Q
    ||||||    
T  38308616 tagacc 38308611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 5507686 - 5507794
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaa-aattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaat 417  Q
    ||||||| ||||||||||||| |||||| |||||||||| ||||| |||| ||||||  |||||||| || |||||||| ||||||||||||||||| ||    
T  5507686 tccgaaacttccccagaaaatcagaaaaaaattcaaggatcatgactcccatagaagaaacttcttatggaactccgcccctcaaaatccaaaattccat 5507785  T
Q  418 cgtttagac 426  Q
    |||||||||    
T  5507786 cgtttagac 5507794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 27670763 - 27670871
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||| ||||| ||||||||||||| |||||||| ||||||||||| ||| ||||| || |||||||| |||||||| |||||||| |||    
T  27670763 tccgaaactttcccataaaatcagaaaaaattcaacgaccatgactcccttagaagagacctcttatgggactccgcccctcaaaattcaaaattccatc 27670862  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  27670863 gtttagacc 27670871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 38065464 - 38065356
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||| ||||| |||||||||||||||| ||||| |||  |||||| |||||||||||| |||||||| ||||||||||||||||  |||    
T  38065464 tccgaaactttcccataaaatcagaaaaaattcaaggatcatgactcctgtagaagagacttcttacgggactccgcccctcaaaatccaaaatttcatc 38065365  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  38065364 gtttagacc 38065356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 304
Target Start/End: Complemental strand, 38066737 - 38066633
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    ||||||||||| ||||||||| || ||  |||| | ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||| | ||    
T  38066737 aaaacagttcatattatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattttaaggacaatattaatcttcattac 38066638  T
Q  300 tctca 304  Q
    |||||    
T  38066637 tctca 38066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 4268416 - 4268297
Alignment:
Q  86 gagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaaca 185  Q
    |||||| || ||||| |||||||| ||||||  ||||||       ||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  4268416 gagtaatgggttttttcggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaaca 4268317  T
Q  186 ccatttttcaaagtaaaaca 205  Q
    || |||||||| ||||||||    
T  4268316 ccctttttcaaggtaaaaca 4268297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 343 - 429
Target Start/End: Original strand, 34517394 - 34517480
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagaccaa 429  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||| | |||||  ||||||||||||||||| ||||||||||||||    
T  34517394 aaaaaattcaaggatcatgactcccatagaagggacttcttacgggattccgcacctcaaaatccaaaattccatcgtttagaccaa 34517480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 41854788 - 41854682
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaa-ttcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgt 420  Q
    |||| ||||||||||||| |||||||| |||||||| |||||  || |||||||| |||||||| || |||||||| ||||||||||||||||| |||||    
T  41854788 gaaacttccccagaaaatcagaaaaaaattcaaggatcatgacaccattagaaggaacttcttatgggactccgcccctcaaaatccaaaattccatcgt 41854689  T
Q  421 ttagacc 427  Q
    |||||||    
T  41854688 ttagacc 41854682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 9847236 - 9847159
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||    
T  9847236 aattctgaacatgtttgtaacattgatagtcattttaaggacaatattaatcttcataactttcatccttgtgttttt 9847159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 9847444 - 9847367
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||| | |||||||| |||||||    
T  9847444 aattctaaacatatttgtaacgtcgatagtcattttaaggacaatattaatcttcctaaatttcatccttgtgttttt 9847367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 35251020 - 35251136
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||| |||| ||||||||||||||| ||||| |||||||||||| |   ||||||||| |||||||| || |||| |||| |||||||||||| ||||    
T  35251020 aaaacaattcatattatataatccaaactgtattagcacaaattctgagtttgtttgtaatatggatagccagtttaaggaccatattaatcttcttaac 35251119  T
Q  300 tctcatccttctgtttt 316  Q
    ||  |||||||| ||||    
T  35251120 tcctatccttctatttt 35251136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 41203073 - 41202968
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| |||||||||||||||||||||||||||||   |||| || | |||||| |||| ||||| | ||||||||  |||||||||||||||  |||    
T  41203073 tccgaaacttccccagaaaattagaaaaaattcaagg---atgactctcgtagaagagactccttacaggactccgcccatcaaaatccaaaatttcatc 41202977  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  41202976 gtttagacc 41202968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 15995000 - 15994898
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||| ||||| |||||||||||||||||      || | ||||| ||||||||||||| |||||||| ||||||||||||||||  |||    
T  15995000 tccgaaacttccccataaaatcagaaaaaattcaaggac------tctcatagaatggacttcttacgggactccgcccctcaaaatccaaaatttcatc 15994907  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  15994906 gtttagacc 15994898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 33440545 - 33440458
Alignment:
Q  228 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||| |||||||||| ||||||||||| ||||| | | |||||||| ||| |||||||||||| ||||| ||||||||||||||||    
T  33440545 tgtatcaacacaaattctgaacatgtttgttacatgaaaattcattttaaggataatattaatctttctaac-ctcatccttctgtttt 33440458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 322 - 427
Target Start/End: Original strand, 39447432 - 39447532
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaa-ttcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgt 420  Q
    |||| ||||| ||||||| |||||||| |||||||||||||       ||||||||||||||||||| |||||||| ||||||||||||||||  |||||    
T  39447432 gaaacttccctagaaaatcagaaaaaaattcaaggaccatgc------tagaagggacttcttacgggactccgcccctcaaaatccaaaattacatcgt 39447525  T
Q  421 ttagacc 427  Q
    |||||||    
T  39447526 ttagacc 39447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 25715259 - 25715336
Alignment:
Q  8 attttttccaaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa 84  Q
    ||||||| |||||||| |||| | ||||| | |||||||||||||||||||||||||| ||||||||||| |||||||    
T  25715259 atttttttcaaaaatgcccttgaagtttccggattttataatccggaatggtgttttcctttgttaaagggtgaaaaa 25715336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 30763916 - 30764025
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaat-tcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaat 417  Q
    ||||||| |||| |||||||| ||||||||  |||| || || || || | ||||||||||||||||||| |||||||| ||||||||||||||||  ||    
T  30763916 tccgaaacttcctcagaaaatcagaaaaaaaatcaaagatcaagactctcatagaagggacttcttacgggactccgcccctcaaaatccaaaatttcat 30764015  T
Q  418 cgtttagacc 427  Q
    ||| ||||||    
T  30764016 cgtctagacc 30764025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 37773829 - 37773764
Alignment:
Q  251 tgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||| || |||| |||| || |||||||| ||||||||||||||||||||||    
T  37773829 tgtttgtaacatggatagccagtttaaggactatgttaatctttctaactctcatccttctgtttt 37773764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 41204025 - 41204138
Alignment:
Q  203 acagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactct 302  Q
    ||||||| ||| ||||||||  || ||||||| |||||||||| |||||||||||||| || ||| | |||||| ||   |||||||| ||||||||||     
T  41204025 acagttcggataatataatctgaactgtatcaacacaaattctgaacatgtttgtaacttgaatattgattttaagggttatattaattttcctaactcc 41204124  T
Q  303 catccttctgtttt 316  Q
    |||| |||||||||    
T  41204125 catcattctgtttt 41204138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 316
Target Start/End: Complemental strand, 27900666 - 27900562
Alignment:
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    |||||||||||  || |||||||||||||||| | |   ||||| |||||||||||  || |||| |||| |||||||| ||| ||||||||||||||||    
T  27900666 attatataatctgaactgtatcagcacaaattatgagtttgtttataacatggataaccagtttaaggaccatattaattttcttaactctcatccttct 27900567  T
Q  312 gtttt 316  Q
    |||||    
T  27900566 gtttt 27900562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 34817219 - 34817299
Alignment:
Q  228 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 308  Q
    ||||||||||| |||||| ||| |||||||||||||||||  || | || |||| |||||||||||||||||| |||||||    
T  34817219 tgtatcagcaccaattctgaacttgtttgtaacatggataaccaatgtaaggaccatattaatcttcctaactatcatcct 34817299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 33833845 - 33833957
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||||||||||||||||| || ||||||| |||||||| | | |||||   || ||||||||| ||  ||| |||| |||||||| || |||||    
T  33833845 aaaacagttcagattatataatccgaactgtatcatcacaaattatgagcatgt---tagcatggatagccagattaaggaccatattaatgtttctaac 33833941  T
Q  300 tctcatccttctgtttt 316  Q
    || ||||||||||||||    
T  33833942 tc-catccttctgtttt 33833957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 12885492 - 12885447
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattct 245  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  12885492 aaaacagttcagattatataatctgaattgtatcagcacaaattct 12885447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 294
Target Start/End: Original strand, 25715683 - 25715744
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttc 294  Q
    |||||| || ||| |||||||||||||||| |||||||||||||  ||||||||||||||||    
T  25715683 cagcaccaactctgaacatgtttgtaacattgatagtcattttaaagacaatattaatcttc 25715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 425
Target Start/End: Complemental strand, 33440344 - 33440291
Alignment:
Q  372 aagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttaga 425  Q
    |||||||||||||||| |||||||| |||||||| |||||||| ||||||||||    
T  33440344 aagggacttcttacgggactccgcctctcaaaattcaaaattccatcgtttaga 33440291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 42478833 - 42478949
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    ||||||||||   ||||||||||  || |||||||||||||||| | |   | ||||||| || ||||  || |||| |||| |||||||||||||||||    
T  42478833 aaaacagttcgagttatataatctgaaatgtatcagcacaaattttgagtttatttgtaatatagataaccagtttaaggaccatattaatcttcctaac 42478932  T
Q  300 tctcatccttctgtttt 316  Q
    |||||||||| ||||||    
T  42478933 tctcatccttatgtttt 42478949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 3957965 - 3957874
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatc 291  Q
    |||| |||||| |||||||||||| || | ||| |||| ||||| ||| |||||| ||||||| |||||||| |||| |||| |||||||||    
T  3957965 aaaatagttcaaattatataatccgaactatattagcataaattttaagcatgttcgtaacattgatagtcactttaaggaccatattaatc 3957874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 17133037 - 17133100
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||| ||||| |||||| |||||| | ||||||||||||||||  ||||||||||||    
T  17133037 tcccttagaagagactttttacgggactccgaccctcaaaatccaaaatttcatcgtttagacc 17133100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 427
Target Start/End: Complemental strand, 32187714 - 32187663
Alignment:
Q  376 gacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||||| ||||| || ||||||||||||||||| ||||||||||||    
T  32187714 gacttcttacgggactccacccctcaaaatccaaaattccatcgtttagacc 32187663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 32187756 - 32187713
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatga 362  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  32187756 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatga 32187713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 429
Target Start/End: Original strand, 11457243 - 11457329
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagaccaa 429  Q
    |||||| ||||||| ||  | |||| ||||||||||||||||||  |||||| | ||||||||  ||||||| ||||||||||||||    
T  11457243 aaaaaaatcaaggatcaaaattcccatagaagggacttcttacgagactccgtccctcaaaatttaaaattccatcgtttagaccaa 11457329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 38308840 - 38308779
Alignment:
Q  257 taacatggatagtcattttagggacaatattaatcttc--ctaactctcatccttctgtttt 316  Q
    |||||||||| ||||||||| |||||||||||||||||   ||||| |||||||||||||||    
T  38308840 taacatggattgtcattttatggacaatattaatcttcttataactatcatccttctgtttt 38308779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 33366954 - 33367010
Alignment:
Q  137 cgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattttt 193  Q
    ||||||||||||| |||  ||||||||||||||| ||||||||| |||||| |||||    
T  33366954 cgcgttacatgatatttccggattacataatccgaaaacccccttaacacctttttt 33367010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 9847147 - 9847085
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||| |||||||||||| |||||| | ||||||||||||||| | ||| ||||||||    
T  9847147 tcccttagaagagacttcttacgggactccg-ctctcaaaatccaaaatcccatcatttagacc 9847085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 427
Target Start/End: Complemental strand, 16750274 - 16750223
Alignment:
Q  376 gacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| ||| | |||||||| ||||||||||||||||| ||||||||||||    
T  16750274 gacttcctacaggactccgcccctcaaaatccaaaattccatcgtttagacc 16750223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 25715773 - 25715835
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||| || |||||| || |||||||| ||||||||||||||||| ||| ||||||||    
T  25715773 tcccttagaagagatttcttatgggactccgcc-ctcaaaatccaaaattccatcatttagacc 25715835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 16750315 - 16750273
Alignment:
Q  320 ccgaaatttccccagaaaattagaaaaaattcaaggaccatga 362  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||    
T  16750315 ccgaaacttccccagacaatcagaaaaaattcaaggaccatga 16750273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 45293737 - 45293846
Alignment:
Q  206 gttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    ||||| |||||||||||  || |||||||||||||||||| | | |  || |||||||||||  |  |||| ||   |||||||||||||||||||||||    
T  45293737 gttcaaattatataatctgaactgtatcagcacaaattctgatc-taattataacatggataaccggtttaagggtcatattaatcttcctaactctcat 45293835  T
Q  306 ccttctgtttt 316  Q
    | |||||||||    
T  45293836 ctttctgtttt 45293846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 9847353 - 9847297
Alignment:
Q  366 ccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttta 423  Q
    ||||||||| |||||||||||| |||| ||| ||||||||||||||||| ||| ||||    
T  9847353 ccttagaagagacttcttacgggactctgcc-ctcaaaatccaaaattccatcattta 9847297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 10288658 - 10288703
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaa 84  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||||    
T  10288658 attttacaatctggaatggtattttcttttgttaaagaatgaaaaa 10288703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 17132875 - 17132932
Alignment:
Q  259 acatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||| |||| |||| | ||||||||||||||| | ||| ||||||||||    
T  17132875 acatggatagtcagtttaaggaccacattaatcttcctaacccacattcttctgtttt 17132932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 9847660 - 9847572
Alignment:
Q  30 agtttctgaattttataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccg 117  Q
    |||||| | ||||||||||| |||||||  ||||  ||||||||||  || |||||||||| || ||||||||| |||||| |||||||    
T  9847660 agtttccggattttataatctggaatggcatttttctttgttaaagagtgaaaaaatgagttactgatttttccagattttgtaatccg 9847572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 25715511 - 25715563
Alignment:
Q  265 atagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||||||||| ||||||||||||| ||| || || |||||||| |||||||    
T  25715511 atagtcattttaaggacaatattaatattcgtagctttcatccttgtgttttt 25715563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 26228156 - 26228272
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||| ||||| | ||||||||| | || |||||||||| | ||| | ||  ||||||| |||||||||   | ||||  ||| ||||||||||| |||||    
T  26228156 aaaatagttcgggttatataattcgaactgtatcagcatacattatgaatctgtttgtgacatggataactagtttaatgaccatattaatcttgctaac 26228255  T
Q  300 tctcatccttctgtttt 316  Q
    |||||||||| ||||||    
T  26228256 tctcatccttttgtttt 26228272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 25 - 316
Target Start/End: Original strand, 44106137 - 44106429
Alignment:
Q  25 cctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaact 123  Q
    ||||||||||| | |||||||||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||| |||||||||||||    
T  44106137 cctttagtttccggattttataatctagaatggtgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccagattttgtaatccggaaact 44106236  T
Q  124 tnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatcc 223  Q
    |       ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||     
T  44106237 tcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatct 44106336  T
Q  224 aaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
     || ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  44106337 gaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattccatggacaatattaatcttcctaactctcatccttctgtttt 44106429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 58 - 316
Target Start/End: Complemental strand, 27928153 - 27927894
Alignment:
Q  58 tgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatg 156  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||  |    
T  27928153 tgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccg 27928054  T
Q  157 gattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttg 256  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  27928053 gattacataatcaggaaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttg 27927954  T
Q  257 taacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27927953 taacatggatagtcattttagagacaatattaatcttcctaactctcatccttctgtttt 27927894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 8885680 - 8885406
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||| ||||||||||||||||||  ||||||| |||||||||| |||||||||||||| ||||||||||||||       ||||||||||    
T  8885680 tataatccggaatgatgttttcttttgttaaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgt 8885581  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||  || ||||||||||||||    
T  8885580 tacatgatgtttccggattacataatccggaaaccccctaaacacccattttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaa 8885481  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8885480 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 8885406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 3094609 - 3094891
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||| ||||||||||||||| ||||||| ||| ||||||||| ||| |||| |||||||||||||| ||||||||||||||       ||||||    
T  3094609 atttaataattcggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggc 3094708  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaaca----gttcagattatataatccaaattgtatc 233  Q
    || |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||    |||| ||||||||||||  || ||||||    
T  3094709 gcattacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacaaacagttccgattatataatctgaactgtatc 3094808  T
Q  234 agcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  3094809 agcacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttctgtttt 3094891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 16 - 316
Target Start/End: Original strand, 37248463 - 37248764
Alignment:
Q  16 caaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataat 114  Q
    |||||||| |||| |||||| | |||| | ||||| ||||||||||||| ||||||| ||| ||||||||| ||| |||| |||||| ||||||| ||||    
T  37248463 caaaaatgcccttgagtttccggatttcaaaatccagaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttctggattttgtaat 37248562  T
Q  115 ccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagatt 214  Q
    ||| ||||||       |||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||||   |||    
T  37248563 ccgaaaacttaaaaaaatagggcgcgttagatgatgtttccggattacataatccagaaaccccctaaacaccatttttcaaggtaaaacagtttgaatt 37248662  T
Q  215 atataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtt 314  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  37248663 atataatccgaattgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactctcatgcttccgtt 37248762  T
Q  315 tt 316  Q
    ||    
T  37248763 tt 37248764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 37 - 316
Target Start/End: Complemental strand, 42281127 - 42280844
Alignment:
Q  37 gaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagg 135  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||||||| ||||||||||||||||||||||||  ||||||| ||||||       |||     
T  42281127 gaattatataatccggaatgatgtttttttttgttaaagggtgaaaaaatgagtaacggatttttccggatttcgtaatccgaaaacttcaaaaaataga 42281028  T
Q  136 gcgcgttacat---gatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtat 232  Q
    |||||||||||   |||||||   ||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||  || |||||    
T  42281027 gcgcgttacatcatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatctgaactgtat 42280928  T
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42280927 cagcacaaattttaaacatgtttgtaacatgcatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 42280844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 38 - 316
Target Start/End: Original strand, 34853257 - 34853534
Alignment:
Q  38 aattttataatccggaatggtgttttcttttgttaaaggatga-aaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntaggg 136  Q
    |||| |||||| ||||||| |||||| |||||||||||| | | |||||||||| ||| |||||||||||||| ||||||| ||||||       |||||    
T  34853257 aattatataattcggaatgatgttttattttgttaaagggtaagaaaatgagta-cgggtttttccggattttgtaatccgaaaactttaaaaaataggg 34853355  T
Q  137 cgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagc 236  Q
    |||||||||||||||||  |||||||| |||| |||||||| ||||||||| |||||||| |||||||||| | |||||||||||||||| |||||||||    
T  34853356 cgcgttacatgatgtttccggattaca-aatctggaaaccctctaaacaccctttttcaaggtaaaacagtccggattatataatccaaactgtatcagc 34853454  T
Q  237 acaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34853455 acaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 34853534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 9 - 318
Target Start/End: Original strand, 16310497 - 16310807
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggatt 107  Q
    |||||| |||||||  |||| |||||||  |||| ||||||| ||||||||||||| |||||||  || ||||||||| ||| || | ||||||||||||    
T  16310497 tttttttcaaaaattcccttgagtttctcgatttcataatccagaatggtgttttcctttgttatggggtgaaaaatggagttacaggtttttccggatt 16310596  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || ||||||||||||||       ||||| |||||| ||||| |||  |||||||| ||||| ||||| ||||||||||| |||||||| ||||||||||    
T  16310597 ttgtaatccggaaacttcaaaaaatagggtgcgttagatgatttttccggattacacaatccagaaactccctaaacaccctttttcaaggtaaaacagt 16310696  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 307  Q
    ||| |||||||||||| || | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  16310697 tcaaattatataatccgaactatatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatgc 16310796  T
Q  308 ttctgtttttg 318  Q
    ||| |||||||    
T  16310797 ttccgtttttg 16310807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 47 - 316
Target Start/End: Original strand, 28916719 - 28916981
Alignment:
Q  47 atccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttaca 145  Q
    |||||||||| ||||||||||||||||||| ||||||| || ||||||| |||||||||||||| ||||||||||||||       |||||||||||| |    
T  28916719 atccggaatgatgttttcttttgttaaagggtgaaaaaatgggtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaaa 28916818  T
Q  146 tgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattct 245  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||| | || |||        ||||||||||||||| || ||||||||||||||||||    
T  28916819 tgatgtttctggattacataaaccggaaaccccctaaacaccctttcttaaggta--------cagattatataatccgaactgtatcagcacaaattct 28916910  T
Q  246 aaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28916911 aaacatgtttgttacatggatagtcattttagggacaatattaatctttctaactctcatccttctgtttt 28916981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 43 - 316
Target Start/End: Original strand, 9073436 - 9073710
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||| || |||| ||||||||||||||||||| | ||||| ||||||||||| |||| |||||||  ||||||||||||||       || |   |||    
T  9073436 tataattcgaaatgatgttttcttttgttaaagggttaaaaaatgagtaacggactttttcggatttgttaatccggaaacttcaaaaaataagattcgt 9073535  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  |||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||| |||||||||| || || ||||| ||||||||    
T  9073536 tacatgatgtttccggattacataatccagaaaccccctaaacaccttttttcaaagtgaaatagttcggattatataacccgaactgtattagcacaaa 9073635  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  9073636 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtctcatccttatgtttt 9073710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 46 - 318
Target Start/End: Complemental strand, 31520116 - 31519843
Alignment:
Q  46 aatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttac 144  Q
    ||||||||||||||||||| ||||||| ||| ||||||||| ||| |||| |||||||||||||| |||||| |||||||       ||| |||||||||    
T  31520116 aatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggctttttccggattttgtaatccagaaacttcaaaaaatagagcgcgttac 31520017  T
Q  145 atgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattc 244  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||| || |||||| ||||| ||||||||||||| || ||||||||||||||| |    
T  31520016 atgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagcacaaatcc 31519917  T
Q  245 taaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    |||| ||  |||||||||| |||| ||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  31519916 taaatataattgtaacatgtatagccattttagggacaatattaatcttcctaactcgtatccttttgtttttg 31519843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 21004318 - 21004590
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| ||||||||||||||||||| ||||||||||||||       || |||    
T  21004318 atttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatccggaaactttaaaaaataaggc 21004417  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||| ||||||  ||||||||||||||| |||| ||||||||||||||||| || |||||| ||||| |||||||||||||     ||||||| |    
T  21004418 gcgttacat-atgtttccggattacataatccgaaaactccctaaacaccattttttaaggtaaaatagttcggattatataatcc-----gtatcagta 21004511  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  21004512 caaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcataactcttatccttttgtttt 21004590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 40994814 - 40994983
Alignment:
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgta 231  Q
    ||||||||||||||||||||||  ||||||||||||| | |||||||||||||||| ||| |||| |||||||||||| ||||||||||||| || ||||    
T  40994814 tagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccctttatcaaggtaaaacagttcggattatataatccgaactgta 40994913  T
Q  232 tcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40994914 tcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 180 - 318
Target Start/End: Complemental strand, 14164146 - 14164008
Alignment:
Q  180 taaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 279  Q
    |||||||| |||||||| |||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14164146 taaacaccctttttcaaggtaaaacagttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 14164047  T
Q  280 acaatattaatcttcctaactctcatccttctgtttttg 318  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  14164046 acaatattaattttcctaactctcatccttctgtttttg 14164008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 174 - 316
Target Start/End: Complemental strand, 17119975 - 17119832
Alignment:
Q  174 accccctaaacaccatttttcaaagtaaaac-agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 272  Q
    ||||| ||||||||||||||||  | ||||| ||||| ||||||||||||  |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  17119975 accccttaaacaccatttttcattggaaaaccagttcggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcat 17119876  T
Q  273 tttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  17119875 tttacggacaatattaatcttcctaactctcatccttctgtttt 17119832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 205 - 316
Target Start/End: Complemental strand, 36165902 - 36165791
Alignment:
Q  205 agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 304  Q
    ||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  36165902 agttcggattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctca 36165803  T
Q  305 tccttctgtttt 316  Q
    ||||||||||||    
T  36165802 tccttctgtttt 36165791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 174 - 311
Target Start/End: Complemental strand, 4259731 - 4259593
Alignment:
Q  174 accccctaaacaccatttttcaaagtaaaac-agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 272  Q
    ||||||||||||||||||||||| | ||||  | ||| ||||||||||||  || |||||||||||||||||||| |||||||||||||| |||||||||    
T  4259731 accccctaaacaccatttttcaagggaaaaataattcggattatataatctgaactgtatcagcacaaattctaagcatgtttgtaacattgatagtcat 4259632  T
Q  273 tttagggacaatattaatcttcctaactctcatccttct 311  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  4259631 tttatggacaatattaatcttcctaactatcatccttct 4259593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 11698383 - 11698267
Alignment:
Q  202 aacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 301  Q
    |||||||| ||||||||||| | || |||||||||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  11698383 aacagttcggattatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactc 11698284  T
Q  302 tcatccttctgtttttg 318  Q
    ||||||||| |||||||    
T  11698283 tcatccttccgtttttg 11698267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 40392626 - 40392728
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||| ||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40392626 aaaacagttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaac 40392725  T
Q  300 tct 302  Q
    |||    
T  40392726 tct 40392728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 33472372 - 33472485
Alignment:
Q  204 cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctc 303  Q
    |||||||||||| |||||||||| || |||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  33472372 cagttcagattacataatccaaactgcatcatcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatc 33472471  T
Q  304 atccttctgttttt 317  Q
    |||||| |||||||    
T  33472472 atccttgtgttttt 33472485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 11698208 - 11698100
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||| |||||||| ||||||||||||||||| |||    
T  11698208 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccatagaagggacgtcttacgggactccgcccctcaaaatccaaaattccatc 11698109  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  11698108 gtttagacc 11698100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 28917042 - 28917149
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||| || |||||||| ||||||||||||||||| ||     
T  28917042 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttcttatgggactccgcccctcaaaatccaaaattccatt 28917141  T
Q  419 gtttagac 426  Q
    ||||||||    
T  28917142 gtttagac 28917149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 33472173 - 33472279
Alignment:
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    |||| |||||||||| || |  ||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  33472173 attacataatccaaactgcacaagcaccaattcttaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcatccttgt 33472272  T
Q  312 gtttttg 318  Q
    |||||||    
T  33472273 gtttttg 33472279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 225 - 316
Target Start/End: Original strand, 40328012 - 40328103
Alignment:
Q  225 aattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  40328012 aattgtatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatctttctgtttt 40328103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 10833551 - 10833467
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  10833551 cagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttcatccttttgttttt 10833467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 13 - 193
Target Start/End: Original strand, 41530570 - 41530753
Alignment:
Q  13 ttccaaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggat-gaaaaatgagtaacggatttttccggatttta 110  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||| ||||||| ||||||||||| | ||||||||||| ||||||||||||| |||||     
T  41530570 ttccaaaaatgcccttgaagtttctggattttataatccggaatgatgttttcctttgttaaagggtggaaaaatgagttacggatttttccgaattttg 41530669  T
Q  111 taatccggaaacttnnnnnnntagggcgcgttacatgatgtttat-ggattacataatccggaaaccccctaaacaccattttt 193  Q
    |||||||||||  |       |||||||||||||||||| ||| |  |||||||||||| | | |||||||||| ||| |||||    
T  41530670 taatccggaaatctcaaaaaatagggcgcgttacatgatttttttcagattacataatctgaacaccccctaaaaacccttttt 41530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 321 - 427
Target Start/End: Complemental strand, 42280781 - 42280675
Alignment:
Q  321 cgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgt 420  Q
    ||||| ||||||||||||| | ||||| |||||||||||| | |||| ||||||||||||||||| | |||||||| ||||||||||||||||| |||||    
T  42280781 cgaaacttccccagaaaatcaaaaaaagttcaaggaccataactcccctagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgt 42280682  T
Q  421 ttagacc 427  Q
    |||||||    
T  42280681 ttagacc 42280675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 316
Target Start/End: Original strand, 6395153 - 6395290
Alignment:
Q  180 taaacaccatttttcaaagtaaa-acagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagg 278  Q
    |||||||| |||||||| | ||| ||||| || |||||||||||  |||||||||||||| |||||  ||| | |||||| |||||||| |||||||| |    
T  6395153 taaacaccctttttcaaggaaaagacagtgcaaattatataatcttaattgtatcagcaccaattccgaacttttttgtagcatggatattcattttatg 6395252  T
Q  279 gacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  6395253 gacaatattaaacttcctaactctcattcttctgtttt 6395290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 1076646 - 1076761
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||||  ||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||  ||||||| ||||||||||||||||| || |    
T  1076646 aaaacagttcaatttatataatccgaattgtat-agcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatcttcatagc 1076744  T
Q  300 tctcatccttctgtttt 316  Q
    ||||||| || ||||||    
T  1076745 tctcatcattttgtttt 1076761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 34853595 - 34853703
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||  || |||||||| ||||||||  ||||||| |||    
T  34853595 tccgaaacttccccataaaatcagaaaaaattcaaggaccatgactcccttagaaaggacttcttctgggactccgcccctcaaaataaaaaattccatc 34853694  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  34853695 gtttagacc 34853703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 330 - 427
Target Start/End: Complemental strand, 8885334 - 8885236
Alignment:
Q  330 cccagaaaattagaaaaaa-ttcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||| |||||||| |||||||||||||| |||| ||||||||||||||||| | |||||||| ||||||||||||||||| ||| ||||||||    
T  8885334 cccagaaaatcagaaaaaaattcaaggaccatgactcccgtagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcatttagacc 8885236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 28423523 - 28423627
Alignment:
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    |||||||||||  || || ||||  ||||||||||||||||||||||||||||||   |||||||  |||||||||||||||||||||||||||||||||    
T  28423523 attatataatctgaactgcatcactacaaattctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatccttct 28423622  T
Q  312 gtttt 316  Q
     ||||    
T  28423623 atttt 28423627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 31234554 - 31234470
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| | |||||||    
T  31234554 cagcaccaattctgaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaactcccatccatgtgttttt 31234470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 9845323 - 9845394
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | ||||||    
T  9845323 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcgtccttatatttttg 9845394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 31519781 - 31519678
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||| ||||| ||||||||||||||||||||||  |||||||||||||| |||||||| ||||  || ||||||||||||||||| || |||    
T  31519781 gaaacttccccataaaatcagaaaaaattcaaggaccatgacacccttagaagggacgtcttacgggactc--cccctcaaaatccaaaattccattgtt 31519684  T
Q  422 tagacc 427  Q
    ||||||    
T  31519683 tagacc 31519678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 316
Target Start/End: Original strand, 36980689 - 36980775
Alignment:
Q  230 tatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||| ||||| |||||||| |||||||| ||||    
T  36980689 tatcagcacaaattatgaacatgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatccttctatttt 36980775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 7982479 - 7982572
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 304  Q
    ||||||||||||  || |||||| ||||||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||    
T  7982479 gattatataatctgaactgtatcggcacaaattttgaacatgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactctca 7982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 3094952 - 3095060
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| | |||||||||||||||||||| |||| ||| ||||||| ||||||  ||||| || ||||||||||||||||  |||    
T  3094952 tccgaaacttgcccagaaaatcataaaaaattcaaggaccatgactcccataggagggactacttacgcgactccacccctcaaaatccaaaatttcatc 3095051  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  3095052 gtttagacc 3095060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 9845487 - 9845573
Alignment:
Q  204 cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaat 290  Q
    |||||| ||||| |||||||||| ||  ||||||| |||||||||||||||||||||||||||| |||||||| || ||||||||||    
T  9845487 cagttcggattacataatccaaactgcgtcagcaccaattctaaacatgtttgtaacatggatactcattttaagggcaatattaat 9845573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 24627903 - 24627989
Alignment:
Q  231 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||| ||| |||||| |||||||||||||||| |||||||||||||  ||||||||||||||||||| || |||||||| |||||||    
T  24627903 atcaacaccaattctgaacatgtttgtaacattgatagtcattttaatgacaatattaatcttcctagctttcatccttgtgttttt 24627989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 36317882 - 36317988
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtt----tgtaacatggatagtcattttagggacaatattaatcttcc 295  Q
    |||||||||| ||||||||||||  || ||||| |||||||||| | ||||||||    ||||||||||||| |||||||| |||||||||||||||| |    
T  36317882 aaaacagttcggattatataatctgaactgtattagcacaaattgtgaacatgttaatttgtaacatggataatcattttaaggacaatattaatctttc 36317981  T
Q  296 taactct 302  Q
    |||||||    
T  36317982 taactct 36317988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 14163949 - 14163841
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    |||||||  |||||||||||| |||||||||||||||||||||  ||||||| ||   ||||||||||| |||||||| ||||||||  ||||||| |||    
T  14163949 tccgaaacctccccagaaaatcagaaaaaattcaaggaccatggctcccttataaataacttcttacgggactccgcccctcaaaataaaaaattccatc 14163850  T
Q  419 gtttagacc 427  Q
     ||||||||    
T  14163849 atttagacc 14163841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 24627697 - 24627761
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttccta 297  Q
    |||||| |||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24627697 cagcaccaattctgaatatgtttgtaacatggatagtcattttaaggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 41530812 - 41530882
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||| || || ||||| |||||||    
T  41530812 aacatgtttgtaacatggatagtcatttcaaggacaatattaatcttcctagctttcgtccttgtgttttt 41530882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 10840815 - 10840714
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    ||||||||| | | |||||||| |||||||||||| |   | |||||||||||||||  || | || |||||||||||||||||||||||||||||||||    
T  10840815 gattatatatttcgaattgtattagcacaaattctgagtttttttgtaacatggataaccagtgtaaggacaatattaatcttcctaactctcatccttc 10840716  T
Q  311 tg 312  Q
    ||    
T  10840715 tg 10840714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 1374030 - 1374146
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||| ||| |||||| |||||| || | ||||| |||||||| ||| ||||||||||| |||||||||||  ||| | || ||||||||| | |||||    
T  1374030 aaaacaattcggattatgtaatccgaactatatcatcacaaattataagcatgtttgtaatatggatagtcagattaagaactatattaatcattctaac 1374129  T
Q  300 tctcatccttctgtttt 316  Q
    |||||||||| ||||||    
T  1374130 tctcatccttatgtttt 1374146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 7981640 - 7981720
Alignment:
Q  236 cacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||| | ||||||||||||||||||||| | |||||| ||||||| ||||  |||||||| ||||||||||||||||    
T  7981640 cacaaattttgaacatgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatccttctgtttt 7981720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 36980836 - 36980944
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| |||| |||||||| || ||||| ||||||| || || |||| ||||||||||||||||| | |||||||  |||||||| |||||| | |||    
T  36980836 tccgaaacttccacagaaaatcaggaaaaaatcaaggatcaagactcccctagaagggacttcttacaggactccgctcctcaaaattcaaaatcccatc 36980935  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  36980936 gtttagacc 36980944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 31234764 - 31234689
Alignment:
Q  234 agcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 309  Q
    ||||| |||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||| || || ||||||||    
T  31234764 agcaccaattctgaacatgttcgtaacatggatcgtcattttaaggacaatattaatcttcttagctttcatcctt 31234689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 36404385 - 36404306
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccg 117  Q
    ||||||||||||||||||| |||| | ||||||||||| || |||||||||| ||||||| ||||||||||| |||||||    
T  36404385 attttataatccggaatggagtttccctttgttaaagggtgaaaaaatgagttacggattattccggattttgtaatccg 36404306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 7965992 - 7965935
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 304  Q
    ||||||||||||||||||||||||| |||| |||||||| || |||||||||||||||    
T  7965992 aacatgtttgtaacatggatagtcactttaaggacaatactagtcttcctaactctca 7965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 8621696 - 8621606
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactct 302  Q
    |||||||||| || || |||||||||||||||| | ||  |||| |||||||||||| |||||||| ||| |||||||||||| ||||||||    
T  8621696 gattatataacccgaactgtatcagcacaaatt-tgaatttgttcgtaacatggataatcattttaaggataatattaatctttctaactct 8621606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 34645520 - 34645583
Alignment:
Q  253 tttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||| ||||||||||||| ||| ||| ||||| || ||||||||||||||||||||||    
T  34645520 tttgtaacatagatagtcattttaaggataattttaatttttctaactctcatccttctgtttt 34645583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 40994751 - 40994802
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacgg 94  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  40994751 tataatccggaatgatgttttcttttgttaaagggtgaaaaatgagaaacgg 40994802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 31234669 - 31234605
Alignment:
Q  364 tcccttagaagggacttcttacg--gcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||||||||||||||||  | |||||||| ||||||||||||||||| ||||||||||||    
T  31234669 tcccttagaagggacttcttacgcgggactccgcc-ctcaaaatccaaaattccatcgtttagacc 31234605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 364 - 426
Target Start/End: Original strand, 40994982 - 40995044
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    |||| ||||||||| || |||||| |||||||| ||||||||||||||||| |||||||||||    
T  40994982 tcccgtagaagggatttattacgggactccgcctctcaaaatccaaaattccatcgtttagac 40995044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 17119771 - 17119664
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| |||||||| ||||||||||||| ||||||| ||| | |||| ||||||  |||||||||||  |  | || ||||||||||||||||  |||    
T  17119771 tccgaaacttccccaggaaattagaaaaaaatcaaggatcattactcccgtagaagatacttcttacgg-gcaacacccctcaaaatccaaaatttcatc 17119673  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  17119672 gtttagacc 17119664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 36165729 - 36165681
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatccc 367  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  36165729 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactccc 36165681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 40328172 - 40328256
Alignment:
Q  327 ttccccagaaaattagaaaa-aattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaa 410  Q
    ||||| ||||||| |||||| |||||||||| ||||| |||| || |||  ||||||||||| |||||||| |||||||||||||    
T  40328172 ttccctagaaaatcagaaaaaaattcaaggatcatgactcccgtaaaagaaacttcttacgggactccgcccctcaaaatccaaa 40328256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 414
Target Start/End: Original strand, 44106493 - 44106585
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattc 414  Q
    |||| ||||||| ||||| | |||||| ||||||||||||| |||||||||||   ||||||| || |||| | | |||||||||||||||||    
T  44106493 gaaacttccccataaaataaaaaaaaaatcaaggaccatgactcccttagaagttccttcttatgggactctgtccctcaaaatccaaaattc 44106585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 24627792 - 24627854
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||| ||| ||||||||    
T  24627792 tcccttagaagagacttcttacagaactccgcc-ctcaaaatccaaaattctatcatttagacc 24627854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 33472289 - 33472352
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||| |||||||||||| ||| |||| |||||||| |||||||  ||||||||||||    
T  33472289 tcccttagaagagacttcttacgggactacgcccctcaaaattcaaaatttcatcgtttagacc 33472352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 413
Target Start/End: Original strand, 41530894 - 41530942
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaatt 413  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  41530894 tcccttagaagagacttcttacgggactccgcc-ctcaaaatccaaaatt 41530942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 4259514 - 4259466
Alignment:
Q  379 ttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||| |||||||| ||||||||||||||||| ||| ||||||||    
T  4259514 ttcttacgggactccgcccctcaaaatccaaaattctatcctttagacc 4259466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 424
Target Start/End: Original strand, 24628001 - 24628060
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttag 424  Q
    ||||||||||| |||||||||||  |||||||| ||||||||||||||||| ||| |||||    
T  24628001 tcccttagaagagacttcttacgagactccgcc-ctcaaaatccaaaattctatcatttag 24628060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 27927833 - 27927734
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||| || |         ||||||||||| ||||| || ||| ||||||||||||  |||    
T  27927833 tccgaaacttccccataaaatcagaaaaaattcaaggaccatgactctc---------acttcttacgggactccacccctccaaatccaaaatttcatc 27927743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 414
Target Start/End: Original strand, 28423699 - 28423783
Alignment:
Q  331 ccagaaaattagaaaaaat-tcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattc 414  Q
    ||||||||||| ||||||| ||||||| || || |||| ||||| |||||||||| || |||||  | |||||||||||||||||    
T  28423699 ccagaaaattaaaaaaaatatcaaggatcaagactcccgtagaaaggacttcttatgggactccatccctcaaaatccaaaattc 28423783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 426
Target Start/End: Original strand, 7981807 - 7981890
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    |||||| ||||| | || || |||||||||||||| || |||  | ||| |||| ||||||||||||||||| |||||||||||    
T  7981807 aaaaaaatcaagcatcaagactcccttagaagggatttgttataggacttcgcccctcaaaatccaaaattccatcgtttagac 7981890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 7971228 - 7971142
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaactt 124  Q
    |||| ||||||  |||||| |||||| || |||| ||| ||||||| | ||| ||||||||||||||||||| ||||| ||||||||    
T  7971228 atttcataatctagaatggcgttttccttcgttatagggtgaaaaacggagttacggatttttccggattttgtaatctggaaactt 7971142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 425
Target Start/End: Original strand, 9073847 - 9073892
Alignment:
Q  380 tcttacggcactccgccgctcaaaatccaaaattcaatcgtttaga 425  Q
    |||||||| |||| ||| ||||||||||||||||| ||||||||||    
T  9073847 tcttacgggactcagcccctcaaaatccaaaattctatcgtttaga 9073892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 426
Target Start/End: Original strand, 36318074 - 36318170
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    ||||||||||||| |||||  |||||| || || | ||||||||  ||||||||| |  ||||| || ||||||||  ||||||| |||||||||||    
T  36318074 cccagaaaattaggaaaaaaacaaggatcaagactaccttagaaatgacttcttatgagactccacccctcaaaatttaaaattccatcgtttagac 36318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 39093598 - 39093714
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||| ||||| ||||||||||||  || ||||||| || ||||| ||| ||||||||||||||  |||  || ||||  ||| ||||||||||| | ||     
T  39093598 aaaatagttcggattatataatctgaaatgtatcaacataaattataagcatgtttgtaacatacataaccagtttaatgaccatattaatctttcaaag 39093697  T
Q  300 tctcatccttctgtttt 316  Q
    ||||||| || ||||||    
T  39093698 tctcatctttatgtttt 39093714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 191; Significance: 1e-103; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 316
Target Start/End: Complemental strand, 4508562 - 4508255
Alignment:
Q  10 tttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattt 108  Q
    ||||||||||||||||||| |||||| | |||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  4508562 tttttccaaaaatgtccttaagtttccggattttataatccagaatggtgttttcttttgttagagggtgaaaaaatgagtaacggatttttccggattt 4508463  T
Q  109 tataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagtt 208  Q
    |||||||| |||| ||       ||||||| ||||||||||||||  |||||| |||||||||||| |||||||||| | |||||||| |||||||||||    
T  4508462 tataatccagaaatttcaaaaattagggcgtgttacatgatgtttccggattatataatccggaaatcccctaaacaacttttttcaaggtaaaacagtt 4508363  T
Q  209 cagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 308  Q
    | ||||||||||||  || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  4508362 cggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactttcatcct 4508263  T
Q  309 tctgtttt 316  Q
    ||||||||    
T  4508262 tctgtttt 4508255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 9 - 318
Target Start/End: Complemental strand, 3717544 - 3717234
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggatt 107  Q
    ||||||||||||||| |||| |||||| | |||||||||||  ||||||||||||||||||||||||| ||||||| ||||||| ||  ||||||| |||    
T  3717544 ttttttccaaaaatgcccttgagtttccggattttataatcttgaatggtgttttcttttgttaaagggtgaaaaaatgagtaatgggcttttccgaatt 3717445  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || ||||||||||||||       ||||||||||||||||||||||  |||||| |||||| ||||||| ||||||||| ||||||||| ||||||||||    
T  3717444 ttgtaatccggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatctggaaacctcctaaacacaatttttcaaggtaaaacagt 3717345  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 307  Q
    || ||||||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  3717344 tcggattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagtcattttagggacaatattaatttttctaactctcatcc 3717245  T
Q  308 ttctgtttttg 318  Q
    |||||||||||    
T  3717244 ttctgtttttg 3717234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 8 - 318
Target Start/End: Original strand, 23406693 - 23407004
Alignment:
Q  8 attttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggat 106  Q
    ||||||| |||||||| | || | |||| | ||||  |||||||||||||||||||| ||||||| ||| ||||||||| ||| |||  |||||||| ||    
T  23406693 atttttttcaaaaatgccattgattttccggatttcgtaatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgagtttttccgaat 23406792  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    ||  ||||||||||||||       ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23406793 ttcgtaatccggaaacttcaaaaaatagggcgcgttagttgatgtttctggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacag 23406892  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    |||  |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23406893 ttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 23406992  T
Q  307 cttctgtttttg 318  Q
    |||| |||||||    
T  23406993 cttccgtttttg 23407004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 47 - 316
Target Start/End: Original strand, 17264346 - 17264616
Alignment:
Q  47 atccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttaca 145  Q
    |||| ||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||| ||||| ||||||||       ||||||||||||||    
T  17264346 atcctgaatgatgttttcttttgttacagggtgaaaaaatgagtaacggatttttccggattttgtaatctggaaacttcaaaaaatagggcgcgttaca 17264445  T
Q  146 tgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattct 245  Q
    ||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||| ||||| ||||||||||||  || ||||||||||||||||||    
T  17264446 tgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaatagttcggattatataatctgaactgtatcagcacaaattct 17264545  T
Q  246 aaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17264546 aaacatgtttgcaacatggttagtcattttagggacaatatttatcttcctaactctcatccttctgtttt 17264616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 14587787 - 14587513
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||| ||||| || ||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||| ||||||       ||||||||||    
T  14587787 tataatctggaattgtattttcttttgttaaagggtgaaaaaatgagtaagggatttttccggattttgtaatccgaaaactttaaaaaatagggcgcgt 14587688  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||   |||||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||||||||||  || |||||| |||||||    
T  14587687 tacatgatgtttcctgattacataatccataaaccccctaaacaccatttttcaaggtaaaacagttcggattatataatcataactgtatcggcacaaa 14587588  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  14587587 ttctaaacatgtttgtaacatggatagtcattttacggacaatattaatcttcctaactctaatccttatgtttt 14587513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 17 - 318
Target Start/End: Original strand, 5699464 - 5699773
Alignment:
Q  17 aaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatc 115  Q
    ||||||||| || |||||| | |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| |||| ||||| || ||||| |||||    
T  5699464 aaaaatgtctttgagtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggttttttcgaattttgtaatc 5699563  T
Q  116 cggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag-------tt 208  Q
    |||||||||       ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||| ||||       ||    
T  5699564 cggaaacttgaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaatacagttcagattt 5699663  T
Q  209 cagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 308  Q
    ||||||||||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  5699664 cagattatataatccgaactgtattaacacaaattctaaatatgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcatcct 5699763  T
Q  309 tctgtttttg 318  Q
    ||||||||||    
T  5699764 tctgtttttg 5699773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 1945791 - 1945483
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgtttt-cttttgttaaaggatgaaaaa-tgagtaacggatttttccggat 106  Q
    |||||| ||| |||||| || |||||  | ||||||||||||||||||||||||| ||||||  ||||| ||||||| ||||| ||||||||||||||||    
T  1945791 tttttttcaataatgtctttgagttttcggattttataatccggaatggtgtttttcttttgacaaagggtgaaaaaatgagttacggatttttccggat 1945692  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    ||| ||||||| ||||||       ||||| ||||||||| |  |||  |||||| ||||| | |||  ||||||||| |||||||||||   ||||||     
T  1945691 tttgtaatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataat-ctgaacacccctaaaccccatttttcaagtgaaaacaa 1945593  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    ||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1945592 ttcagattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactctcatc 1945493  T
Q  307 cttctgtttt 316  Q
    ||||||||||    
T  1945492 cttctgtttt 1945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 9 - 318
Target Start/End: Complemental strand, 2813487 - 2813176
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggat- 106  Q
    |||||| ||||||||| ||| || ||| | |||| ||||| ||||||||||||||| ||| ||| ||| ||||||||| ||| || |||||||||||||     
T  2813487 tttttttcaaaaatgttcttgagcttccggatttcataattcggaatggtgttttcctttattatagggtgaaaaatggagttacagatttttccggata 2813388  T
Q  107 -tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaaca 205  Q
     ||| ||||||||||||||       || || | ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||     
T  2813387 ttttgtaatccggaaacttcaaaaaataaggtgtgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacg 2813288  T
Q  206 gttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    |||| ||| ||||||||| || ||||||| |||||||||||||||| ||| ||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  2813287 gttcggat-atataatccgaactgtatcaccacaaattctaaacatatttttaacatgaatagtcattttatggataatattaatcttcctaactctcat 2813189  T
Q  306 ccttctgtttttg 318  Q
    ||||| |||||||    
T  2813188 ccttccgtttttg 2813176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 156 - 316
Target Start/End: Original strand, 2539497 - 2539657
Alignment:
Q  156 ggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgttt 255  Q
    ||||||||||||| |||||||||||||||||| |||||||| |||||||||||| ||||||||||||| || | |||| ||||||||||| |||||||||    
T  2539497 ggattacataatctggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactctatccgcacaaattctgaacatgttt 2539596  T
Q  256 gtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2539597 gtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 2539657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 39 - 270
Target Start/End: Original strand, 32035041 - 32035268
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| |||||| |||||| ||||||||||||||| | ||||||||||| ||| ||||||||||||||||||| ||||||||||||||       ||||||    
T  32035041 atttcataatctggaatgatgttttcttttgttatatgatgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggc 32035140  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||| || |||||| ||||| ||||||||||||     ||||||||||    
T  32035141 gcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaatagttcggattatataatc-----tgtatcagca 32035235  T
Q  238 caaattctaaacatgtttgtaacatggatagtc 270  Q
    ||||| |||||||| ||||||||||| ||||||    
T  32035236 caaatcctaaacatatttgtaacatgtatagtc 32035268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 316
Target Start/End: Complemental strand, 24604623 - 24604314
Alignment:
Q  11 ttttccaaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggatt 107  Q
    ||||| |||||||||||| | ||||  | |||| ||| |||| | |||||||||| ||||| | ||| |||||||  ||||| | ||||||||||| |||    
T  24604623 ttttcaaaaaatgtccttgaagttttcggatttcatattccgaactggtgttttcctttgtcatagggtgaaaaaaatgagttaaggatttttccgaatt 24604524  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa-cag 206  Q
    || ||||||  ||||||       |||||||  ||||||||| | |  ||||||||||||||| | ||||| ||||||||||||||||| | |||| |||    
T  24604523 ttgtaatccaaaaacttcaaaaaatagggcgtcttacatgatttcttcggattacataatccgaacaccccttaaacaccatttttcaagggaaaaacag 24604424  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    |||| |||||||||||  || | |||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||| |||||    
T  24604423 ttcatattatataatctgaactctatcagcacaaattctaaacatatttgtaacaaagatagtcattttagagacaatattaatcttcctaactttcatc 24604324  T
Q  307 cttctgtttt 316  Q
    ||||||||||    
T  24604323 cttctgtttt 24604314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 316
Target Start/End: Original strand, 5638776 - 5639068
Alignment:
Q  9 ttttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaat-gagtaacggatttttccggat 106  Q
    ||||||||||||||| |||| || |||| | |||| ||||||||||||||||||||| | ||||| ||| |||||||| |||| ||||||||||||||||    
T  5638776 ttttttccaaaaatgcccttgaggtttccggatttcataatccggaatggtgttttcctctgttatagggtgaaaaatagagttacggatttttccggat 5638875  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    |||| ||                  ||||||||||||||||||||||  ||||||||||||  | |||  ||||||||||| |||||||| |||||||||    
T  5638876 tttaaaa-----------------atagggcgcgttacatgatgtttccggattacataatttgaaaaatccctaaacaccctttttcaaggtaaaacag 5638958  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    ||| ||||||||||||| || |||||||||||| ||  ||||||||| ||||||||  |||| |||| |||||||||||||||||||| ||||||| |||    
T  5638959 ttcggattatataatccgaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctagggacaatattaatcttcttaactcttatc 5639058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 43 - 205
Target Start/End: Original strand, 7412760 - 7412922
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaa-atgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||| |||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||||       ||||||| ||    
T  7412760 tataatctggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgtgt 7412859  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaaca 205  Q
    ||||||||||||  |||||||||||||| |||| |||||||||||| |||||||| ||||||||    
T  7412860 tacatgatgtttccggattacataatcc-gaaaacccctaaacaccctttttcaaggtaaaaca 7412922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 33413608 - 33413402
Alignment:
Q  9 ttttttccaaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggat 106  Q
    ||||||||||||||| | || | ||||| | |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| ||| ||||||| | ||    
T  33413608 ttttttccaaaaatgcctttgatgtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgaatttttctgaat 33413509  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    ||| ||||||||||||||       ||||||||||||||||||||||   |||||||||||| |||||||||||||||| | |||||||| |||||||||    
T  33413508 tttgtaatccggaaacttcaaaaa-tagggcgcgttacatgatgtttccagattacataatctggaaaccccctaaacaacctttttcaaggtaaaacag 33413410  T
Q  207 ttcagatt 214  Q
    ||| ||||    
T  33413409 ttcggatt 33413402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 92 - 316
Target Start/End: Original strand, 9905100 - 9905321
Alignment:
Q  92 cggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattt 191  Q
    |||||||||||||||||| |||| |||||| ||       ||||||||| ||| |||| |||  ||||||||||||||| | ||||||||||| ||||      
T  9905100 cggatttttccggattttgtaattcggaaatttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccctaaacgccatca 9905199  T
Q  192 ttcaaagtaaaac-agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg-acaatattaa 289  Q
    ||||| | ||||  ||||  |||||||||| |||     |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  9905200 ttcaagggaaaaatagtttggattatataaccca-----tatcagcacaaattttaaacatgtttgtaacatggataatcattttagggaacaatattaa 9905294  T
Q  290 tcttcctaactctcatccttctgtttt 316  Q
    | ||||| ||||| |||||||||||||    
T  9905295 ttttccttactcttatccttctgtttt 9905321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 7734395 - 7734279
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||||||||||||||| | || |||||||  ||||||||||||||||||||||||| | || ||||||||| ||||||||||||||||||||||    
T  7734395 aaaacagttcagattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatattaatcttcctaac 7734296  T
Q  300 tctcatccttctgtttt 316  Q
    | |||||||| ||||||    
T  7734295 tatcatccttttgtttt 7734279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 2539718 - 2539825
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| |||||||||||||||||||||| || | |||||| |||||||||||| |||||||| |||||||||||||||||||||    
T  2539718 tccgaaacttgcccagaaaatcagaaaaaattcaaggaccatgactctcatagaagtgacttcttacgggactccgcccctcaaaatccaaaattcaatc 2539817  T
Q  419 gtttagac 426  Q
    ||||||||    
T  2539818 gtttagac 2539825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 316
Target Start/End: Complemental strand, 29289740 - 29289578
Alignment:
Q  156 ggattacataatccggaaaccccctaaacaccatttttcaaagt--aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgt 253  Q
    |||||| |||||| | | ||||| ||||||||||||||  ||||  |||||| ||| ||||||||||||  || |||||||||||||||| | ||||| |    
T  29289740 ggattatataatctgaacaccccttaaacaccattttttcaagtgaaaaacaattcggattatataatctgaactgtatcagcacaaattatgaacatct 29289641  T
Q  254 ttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||| |||| | |||||| ||||||||||||| |||||||||| ||||||||||||||    
T  29289640 ttgtaacatagatattaattttatggacaatattaattttcctaactcgcatccttctgtttt 29289578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 205 - 316
Target Start/End: Original strand, 29519374 - 29519485
Alignment:
Q  205 agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 304  Q
    ||||| |||||||||||   || |||||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||| |||    
T  29519374 agttcggattatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatca 29519473  T
Q  305 tccttctgtttt 316  Q
    ||||||| ||||    
T  29519474 tccttctatttt 29519485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 330 - 423
Target Start/End: Complemental strand, 14587442 - 14587349
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttta 423  Q
    |||||||||||||||||||||||||||||| || |||||||||||| ||||||||||| |||||||| ||||||||||||||||| || |||||    
T  14587442 cccagaaaattagaaaaaattcaaggaccaagactcccttagaaggaacttcttacgggactccgccactcaaaatccaaaattccattgttta 14587349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 21514923 - 21514815
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaa-ttcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaat 417  Q
    ||||||| ||||||| |||||||||||||| |||||||| ||| | |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||    
T  21514923 tccgaaacttccccataaaattagaaaaaaattcaaggatcat-actcccttagaagggacttcttacgggactccgcccctcaaaatccaaaattccat 21514825  T
Q  418 cgtttagacc 427  Q
    ||||||||||    
T  21514824 cgtttagacc 21514815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 21515056 - 21514989
Alignment:
Q  244 ctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21515056 ctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 21514989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 4508194 - 4508086
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| |||| |||||||| ||||| |||||||||||||||| ||||  ||||| ||||||||| || |||||||| ||||||||||||||||| |||    
T  4508194 tccgaaacttccgcagaaaatcagaaacaattcaaggaccatgactcccacagaagagacttcttaagggactccgcccctcaaaatccaaaattccatc 4508095  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  4508094 gtttagacc 4508086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 13801139 - 13800980
Alignment:
Q  157 gattacataatccggaaaccccctaaacaccatttttcaaagtaa-aacagttcagattatataatccaaattgtatcagcacaaattctaaacatgttt 255  Q
    ||||| |||||||| | ||||| |||||||| |||| ||| | || |||||||| ||||| ||||||  || ||||| |||| |||||||||||||||||    
T  13801139 gattatataatccgaacaccccttaaacaccctttt-caaggaaagaacagttcggattacataatcggaactgtattagcataaattctaaacatgttt 13801041  T
Q  256 gtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||| |||  |||||||| | ||||||||||||||||||||||||||| || ||||||    
T  13801040 gtaacatagattatcattttatgaacaatattaatcttcctaactctcatcattatgtttt 13800980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 427
Target Start/End: Original strand, 237090 - 237173
Alignment:
Q  344 aaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  237090 aaaaaatcaaggaccaagaatcccttagaagggtcttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacc 237173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 2813116 - 2813006
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaa--ttcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaa 416  Q
    ||||||| ||||||||||||| ||||||||  |||||||||||||| |||||||||| |||||||||| || ||||| || ||||||||||||||||  |    
T  2813116 tccgaaacttccccagaaaatcagaaaaaaaattcaaggaccatgactcccttagaatggacttcttatgggactccacccctcaaaatccaaaatttca 2813017  T
Q  417 tcgtttagacc 427  Q
    |||||||||||    
T  2813016 tcgtttagacc 2813006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 24604244 - 24604145
Alignment:
Q  328 tccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||| ||||||| | |||||||||||||| ||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||| | ||||||||||    
T  24604244 tccctagaaaataaaaaaaaattcaaggatcatgactcccttagaagggacttcttgcggaactccgcctctcaaaatccaaaattccaccgtttagacc 24604145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 17264677 - 17264782
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| ||| || | ||||||||||||||||  |||    
T  17264677 tccgaaacttccccagaaaatcagaaaa-attcaaggaccatgactcccctagaagggacttcttacgggacttcgtccctcaaaatccaaaatttcatc 17264775  T
Q  419 gtttaga 425  Q
    |||||||    
T  17264776 gtttaga 17264782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 3717174 - 3717066
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    |||||||  |||||| ||||| |||||||||||||||||||||  |||| |||||| |||||||||||| |||||||| ||||||||||||||||| |      
T  3717174 tccgaaacatccccaaaaaatcagaaaaaattcaaggaccatggctcccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccact 3717075  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  3717074 gtttagacc 3717066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 228 - 316
Target Start/End: Original strand, 34528558 - 34528646
Alignment:
Q  228 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||| | ||| |||||||||||| ||||||||||| ||||||||||    
T  34528558 tgtatcagcacaaattatgaacatgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcattcttctgtttt 34528646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 5639153 - 5639232
Alignment:
Q  344 aaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttta 423  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  5639153 aaaaattcaaggaccatgactcctttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgttta 5639232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 316
Target Start/End: Original strand, 236914 - 237000
Alignment:
Q  230 tatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||| | ||||||||||||||||||| | |||||||| |||| |||||||||||||||||||||||| |||| ||||    
T  236914 tatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatcgttctatttt 237000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 17500989 - 17501073
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| || ||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||| | |||||||| |||||||    
T  17500989 cagcaccaaatctgaacatgtttgtaacatgaatagtcattttaaggacattattaatcttcctaattttcatccttgtgttttt 17501073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 21517618 - 21517542
Alignment:
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagtt 208  Q
    ||||||| | ||||| ||||||  |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  21517618 tagggcgtgctacataatgtttccggattacataattcggaaaccccttaaacaccatttttcaaagtaaaacagtt 21517542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 17501197 - 17501288
Alignment:
Q  231 atcagcacaaattctaaacatgtttgtaacatggatag-----tcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    ||||| || |||||| ||||||||||||||||||||||     |||||||| |||||||||||||||||||| || |||||||| |||||||    
T  17501197 atcaggaccaattctgaacatgtttgtaacatggatagtatagtcattttaaggacaatattaatcttcctagctttcatccttgtgttttt 17501288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 32044537 - 32044588
Alignment:
Q  265 atagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  32044537 atagtcattttagggacaatattaatcttcctaactcttatccttttgtttt 32044588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 6704183 - 6704089
Alignment:
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    |||||||||||| || ||| | ||||||||||| |||  | |||||||||||||||   | |||| |||||||||||||||||||||||||||||    
T  6704183 attatataatccgaactgtgttagcacaaattccaaatctatttgtaacatggataactagtttaaggacaatattaatcttcctaactctcatc 6704089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 5699918 - 5699973
Alignment:
Q  372 aagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  5699918 aaggaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacc 5699973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 427
Target Start/End: Original strand, 9905388 - 9905438
Alignment:
Q  377 acttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  9905388 acttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacc 9905438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 21517713 - 21517633
Alignment:
Q  33 ttctgaattttataatccggaatggtgtttt-----cttttgttaaaggatgaaaaa-tgagtaacggatttttccggatt 107  Q
    ||||| ||||||||||||| |||||||||||     ||||||||||||| ||||||| ||| |||||||||||||||||||    
T  21517713 ttctggattttataatccgaaatggtgtttttaattcttttgttaaagggtgaaaaaatgaataacggatttttccggatt 21517633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 427
Target Start/End: Complemental strand, 1945416 - 1945366
Alignment:
Q  377 acttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||| |||||||| ||||||||||||||||| | ||||||||||    
T  1945416 acttcttacgggactccgcccctcaaaatccaaaattccaacgtttagacc 1945366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 3365806 - 3365871
Alignment:
Q  251 tgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||   | |||| |||  |||||||||||||||||| |||||||||||||||    
T  3365806 tgtttgtaacatggataacaagtttaaggaacatattaatcttcctaactttcatccttctgtttt 3365871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 14038030 - 14037918
Alignment:
Q  201 aaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaact 300  Q
    ||||||||| |||||||||| || || |||||||||||||||||| |   | |||||||||||||||  |  ||||  ||| |||||||||||| ||||     
T  14038030 aaacagttcggattatataacccgaactgtatcagcacaaattctgagtctctttgtaacatggataacctgtttaaagaccatattaatcttcttaac- 14037932  T
Q  301 ctcatccttctgtttt 316  Q
      ||||||||||||||    
T  14037931 --catccttctgtttt 14037918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 7416125 - 7416161
Alignment:
Q  391 tccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| ||||||||||||||||||||||||||||||    
T  7416125 tccgcccctcaaaatccaaaattcaatcgtttagacc 7416161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 10310439 - 10310384
Alignment:
Q  261 atggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||| |||| |||| |||||||||||||||||| |||| ||||| ||||    
T  10310439 atggatagtcaatttaaggaccatattaatcttcctaactatcattcttctatttt 10310384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 3365976 - 3366033
Alignment:
Q  369 tagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    |||||| |||||||||||  |||||| ||||||||||| ||||||  |||||||||||    
T  3365976 tagaagagacttcttacgagactccgtcgctcaaaatctaaaatttcatcgtttagac 3366033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 7413017 - 7413082
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttctta 384  Q
    ||||||| |||| |||||||| |||||||| ||||||||||| | ||||| ||||  |||||||||    
T  7413017 tccgaaacttccacagaaaatcagaaaaaactcaaggaccataactccctaagaaatgacttctta 7413082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 316
Target Start/End: Original strand, 16450316 - 16450420
Alignment:
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    ||||||||||| ||  ||||||| || ||||| | | | | |||||||||||||||  || |||| |||  |||||||||||||||| ||||||| || |    
T  16450316 attatataatctaatctgtatcaacataaattttgagcttatttgtaacatggataaccagtttaaggaacatattaatcttcctaaatctcatcattat 16450415  T
Q  312 gtttt 316  Q
    |||||    
T  16450416 gtttt 16450420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 16450533 - 16450593
Alignment:
Q  367 cttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||| |||||||| |||| |  ||||||||  |||||||||||||||| ||||||||||||    
T  16450533 cttaaaagggactacttatgagactccgcccatcaaaatccaaaattccatcgtttagacc 16450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 43 - 316
Target Start/End: Original strand, 19835460 - 19835734
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||| ||||||||||||||       ||||| ||||    
T  19835460 tataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaactttgaaaaatagggtgcgt 19835559  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| || ||||||||||||||    
T  19835560 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaa 19835659  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  19835660 ttctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcctaactctcatctttctgtttt 19835734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 25491627 - 25491348
Alignment:
Q  38 aattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntaggg 136  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||| |||||||||  ||||| |||||||| ||||||||||||||       ||||     
T  25491627 aattatataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgagttttttcggattttgtaatccggaaacttcaaaaaatagga 25491528  T
Q  137 cgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagc 236  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||  || |||||||||    
T  25491527 cgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccttttttcaaggtaaaacaattcggattatataatctgaactgtatcagc 25491428  T
Q  237 acaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25491427 acaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcatccttctgtttt 25491348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 43 - 316
Target Start/End: Original strand, 40703603 - 40703878
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaa--atgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcg 140  Q
    ||||||| |||||| ||||||||||| ||||||| ||||||  |||||||||||||||||||||||||| ||||||||||| ||       ||||| ||     
T  40703603 tataatctggaatgatgttttctttttttaaagggtgaaaagaatgagtaacggatttttccggattttgtaatccggaaatttcaaaaaatagggtgca 40703702  T
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||||||||||||  ||||||||||| | | |||||||||||||||| |||||||| |||||||||||| ||||||||||||| || |||||||||||||    
T  40703703 ttacatgatgtttccggattacataacctgaaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaa 40703802  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40703803 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 40703878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 9 - 317
Target Start/End: Original strand, 38536076 - 38536385
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatga-gtaacggatttttccggatt 107  Q
    ||||||||||||||| ||||   |||| | |||| |||||||| |||||||||||| ||||||| ||| |||||||||| || |||| ||||||||||||    
T  38536076 ttttttccaaaaatgcccttgcatttccggatttcataatccgaaatggtgttttcctttgttatagggtgaaaaatgaagttacgggtttttccggatt 38536175  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || |||| |||||||||       ||||||| ||||||||||||||   ||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  38536176 ttgtaattcggaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaaccccctaaacaccttttttcaaggtaaaacagt 38536275  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 307  Q
    || |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||      
T  38536276 tcggattatataatctaaattgtatctgcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcatta 38536375  T
Q  308 ttctgttttt 317  Q
    ||||||||||    
T  38536376 ttctgttttt 38536385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 53 - 316
Target Start/End: Complemental strand, 48319281 - 48319017
Alignment:
Q  53 aatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgt 151  Q
    |||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||  ||||||||||||||       ||||||||||||||||||||    
T  48319281 aatgatgttttcttttgttaaagggtgaaaaaatgagtgacggatttttccggatttg-taatccggaaacttcaaaaaatagggcgcgttacatgatgt 48319183  T
Q  152 ttatggattacataatccggaaaccccctaaacaccattttt-caaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaaca 250  Q
    || |||||||||||||||| |||||||||||||||| ||||| ||| ||||||||| || ||||||||||||| || |||||||||||||||||||||||    
T  48319182 ttctggattacataatccgaaaaccccctaaacacctttttttcaaggtaaaacagctcggattatataatccgaactgtatcagcacaaattctaaaca 48319083  T
Q  251 tgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48319082 tgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 48319017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 17933364 - 17933090
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||| |||||| ||||||||||||||||||| || |||||||| |||||||||||||| |||||| |||||| |||||||       ||||||||||    
T  17933364 tataatctggaatgatgttttcttttgttaaagggtgcaaaaatgaataacggatttttccagattttgtaatccagaaacttcaaaaaatagggcgcgt 17933265  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  ||||||||||||| ||||||||| |||||||| ||||| || |||||||||||| ||||||||||||| ||  |||||||||||||    
T  17933264 tacatgatgtttccggattacataatctggaaaccccttaaacacccttttttaaggtaaaacagttcggattatataatccgaacagtatcagcacaaa 17933165  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  17933164 ttctaaacatgtttgtaacatggataatcattttagggacattattaatcttcctaactctcatccttctgtttt 17933090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 55052876 - 55052578
Alignment:
Q  13 ttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttat 111  Q
    ||||||||||| |||| |||||| | |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| |||| |||||||||||| | |    
T  55052876 ttccaaaaatgcccttgagtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattatgt 55052777  T
Q  112 aatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcag 211  Q
    |||||||||||||       ||||||| |||| |||||||||  |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||      
T  55052776 aatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattatataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcga 55052677  T
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  55052676 attatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttc 55052578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 46440502 - 46440227
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcg 140  Q
    |||||| ||||||| ||| |||||||||||||||||||||||  ||| |||||| |||||||| ||||||||||||||||||||       |||| ||||    
T  46440502 tataattcggaatgatgtattcttttgttaaaggatgaaaaaaatgaataacgggtttttccgaattttataatccggaaacttaaaaaaataggacgcg 46440403  T
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| || | |||||||||||    
T  46440402 ttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactatatcagcacaa 46440303  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  46440302 attctaaacatggttgtaacatggatattcattttagggacaatactaatcttcataactctcatccttctctttt 46440227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 16 - 316
Target Start/End: Complemental strand, 2506288 - 2505984
Alignment:
Q  16 caaaaatgtcctttagtttctgaattttataatccggaa-tggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttata 112  Q
    |||||||| |||| |||||| | ||||||||||| | || || ||||||||||||||||||| |||||||  ||||||||||||||||||  ||||| |     
T  2506288 caaaaatgcccttgagtttccggattttataatcagaaaatgatgttttcttttgttaaagggtgaaaaaaatgagtaacggatttttccaaattttgtg 2506189  T
Q  113 atccggaaacttnnnnnnnta-gggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcag 211  Q
    || | ||||| |       || ||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||  |    
T  2506188 attcagaaacatcaaaaaataagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagtttgg 2506089  T
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2506088 attatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaattctcatccttct 2505989  T
Q  312 gtttt 316  Q
    |||||    
T  2505988 gtttt 2505984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 43 - 308
Target Start/End: Original strand, 7931601 - 7931863
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||||||||||   ||||||||||||||||| ||||||| |||||||||| ||||||||||||||  |||||||||||||       ||||||||||    
T  7931601 tataatccggaatg---ttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccggattttgcaatccggaaacttcaaaaaatagggcgcgt 7931697  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||| || | ||| |||||||||||| ||||||||||||  || | ||| ||||||||    
T  7931698 tacattatgtttccggattacataatccggaaaccccctaaacacccttct-caatgtaaaacagttcggattatataatctgaactatattagcacaaa 7931796  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 308  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7931797 ttctaaacatgtttgtaacatggatagttattttagggacaatattaatcttcctaactctcatcct 7931863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 11 - 318
Target Start/End: Complemental strand, 25752706 - 25752395
Alignment:
Q  11 ttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttctttt--gttaaaggatgaaaaa--tgagtaacggatttttccggat 106  Q
    |||| ||||||| || || |||||| | |||||||||||||||||| |||||| ||||  |||||| | |||||||  ||||||| ||||||||||||||    
T  25752706 tttttcaaaaatatcattgagtttccggattttataatccggaatgatgtttttttttttgttaaaaggtgaaaaaaatgagtaatggatttttccggat 25752607  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    ||| ||||||||||| ||       |||||||| |||||||||||||   |||||||||||||| ||||||| |||||||| |||||||| |||||||||    
T  25752606 tttgtaatccggaaatttcaaaaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccataaacaccctttttcaaggtaaaacag 25752507  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    ||| |||||||| |||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  25752506 ttcggattatatgatccgaaatgtattagcacaaattctaaacatgtttgtaacatggatagtcattttaaggacaatatcaatcttcctagctctcatc 25752407  T
Q  307 cttctgtttttg 318  Q
     || ||||||||    
T  25752406 tttatgtttttg 25752395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 132 - 316
Target Start/End: Complemental strand, 31582559 - 31582375
Alignment:
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgta 231  Q
    |||||||| |||||||||||||   ||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||  |||||||    
T  31582559 tagggcgcattacatgatgttttctgattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatctgaattgta 31582460  T
Q  232 tcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||    
T  31582459 tcagcacaaattctaaacatgtttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatccttctgtttt 31582375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 3703513 - 3703202
Alignment:
Q  8 attttttccaaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccgga 105  Q
    |||| ||||||||||| |||| | ||||| | |||| |||||||| | | |||||||| ||||||| ||| ||||||| ||||| |||||||||| ||||    
T  3703513 atttcttccaaaaatgcccttgaagtttccggatttcataatccgaactagtgttttcctttgttatagggtgaaaaaatgagttacggattttttcgga 3703414  T
Q  106 ttttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa-c 204  Q
    |||| ||||||| ||||||       |||| || |||||||||| |||  |||||||||||| || | ||||||||||||||||||||||| | |||| |    
T  3703413 ttttgtaatccgaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaacaccccctaaacaccatttttcaagggaaaaac 3703314  T
Q  205 agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 304  Q
    ||||  | ||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||||||| |||||||||    
T  3703313 agttatggttatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagtcattttaggaagaatattaatcttcataactctca 3703214  T
Q  305 tccttctgtttt 316  Q
    ||||||||||||    
T  3703213 tccttctgtttt 3703202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 6003936 - 6003626
Alignment:
Q  8 attttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccgga 105  Q
    ||||||| ||||||| ||||| || |||||| |||| |||||||||||||||| |||| ||||||| ||| ||||||||| ||| |||||||||| || |    
T  6003936 atttttttcaaaaatatccttgaggtttctggatttcataatccggaatggtggtttcctttgttatagggtgaaaaatggagttacggattttttcgaa 6003837  T
Q  106 ttttataatccggaaacttnnnnnnnt--agggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa 203  Q
    |||||||||||||||||||          || | ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||  || ||||||    
T  6003836 ttttataatccggaaacttaaaaaaaataagagtgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccttttt--aaggtaaaa 6003739  T
Q  204 cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctc 303  Q
     ||||| ||||||||||||| || |||||| ||||||||  ||||||| ||| ||| ||| |||||||||||||||| |||||||||||||||||||||     
T  6003738 tagttcggattatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtatagtcattttagggataatattaatcttcctaactctt 6003639  T
Q  304 atccttctgtttt 316  Q
    |||||| ||||||    
T  6003638 atccttttgtttt 6003626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 32441747 - 32442024
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| | ||||||||| ||||||| ||||||||||||||       ||| ||    
T  32441747 atttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttaaggatttttctggattttgtaatccggaaacttcaaaaaatagcgc 32441846  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||||||  ||||| || |||||| ||||| |||||||||||||||| |||| |||||    
T  32441847 gcgttacatgatgtttccggattacataatccggaaacccc-taaacacatttttttaaggtaaaatagttcggattatataatccaaactgtaccagca 32441945  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    || ||  ||||||| ||||||||||| |||  |||||||  |||||||||||||||||||||||| |||||| ||||||    
T  32441946 catatcgtaaacatatttgtaacatgtataaccattttaaagacaatattaatcttcctaactcttatccttttgtttt 32442024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 34972810 - 34973078
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcg 138  Q
    |||| ||||||||||||||||||||| ||||||| ||| |||||||||       || ||   |||||||| ||||| ||||||||       |||||||    
T  34972810 atttcataatccggaatggtgttttcctttgttatagggtgaaaaatg-------gagtta--cggattttgtaatctggaaacttaaaaaaatagggcg 34972900  T
Q  139 cgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcac 238  Q
    |||||||||||||||  ||| ||||||||||| |||||||||||||||||||||| || |||||| ||||| ||||||||||||| || ||||||||||     
T  34972901 cgttacatgatgttttcggactacataatccgaaaaccccctaaacaccattttttaaggtaaaatagttcggattatataatccgaactgtatcagcat 34973000  T
Q  239 aaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  34973001 aaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgtttt 34973078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 6229073 - 6228766
Alignment:
Q  9 ttttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggat 106  Q
    |||||| ||||||||||||| || |||| | |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||  ||||||||||||||||    
T  6229073 tttttttcaaaaatgtccttgaggtttcaggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagctacggatttttccggat 6228974  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacacca--tttttcaaagtaaaac 204  Q
    ||| ||| ||||||||||       ||||||||||||||||||||||  ||||||   ||| |||||||||| ||||||||   ||||| || ||||||     
T  6228973 tttgtaacccggaaacttcaaaaaatagggcgcgttacatgatgtttccggatta---aattcggaaacccc-taaacacccctttttttaaggtaaaat 6228878  T
Q  205 agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 304  Q
    ||||| ||||||||||||| || ||||||| | ||||| ||||| || || |||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  6228877 agttcggattatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatagccattttagggacaatattaatcttcctaactctta 6228778  T
Q  305 tccttctgtttt 316  Q
    ||||| ||||||    
T  6228777 tccttttgtttt 6228766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 49396944 - 49397226
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||| ||||||| ||| ||| ||| ||||||||| ||| ||||||||||||||||||| ||||||||||||||       ||||      
T  49396944 atttcataatccggaatgatgttttcctttattatagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaataggat 49397043  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    |||||||| ||||||| |||||||||||||||| ||| ||| |||||| ||||||| || |||||| ||||| |||||||||| || || ||||||||||    
T  49397044 gcgttacaagatgtttttggattacataatccgaaaatcccttaaacatcattttttaatgtaaaatagttcggattatataaaccgaactgtatcagca 49397143  T
Q  238 caaattctaaacatgtttgtaacatggat----agtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
     |||| |||||||| ||||||||||| ||    |  ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  49397144 aaaatcctaaacatatttgtaacatgtataaccatccattttagggacaatattaatcttcctaactcttatccttttgtttt 49397226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 97 - 316
Target Start/End: Original strand, 8106387 - 8106608
Alignment:
Q  97 ttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaa 196  Q
    ||||||||||||| ||||||| ||||||       ||||||||| |||||||| |||  | ||||||||||||| | ||||||||||||||||||||| |    
T  8106387 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccatttttcta 8106486  T
Q  197 agtaaaac-agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttag-ggacaatattaatcttc 294  Q
     | ||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||     
T  8106487 gggaaaaatagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatcttt 8106586  T
Q  295 ctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||    
T  8106587 ctaactctcatccttctgtttt 8106608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 43 - 246
Target Start/End: Complemental strand, 54631690 - 54631485
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||||||||||  |||||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||||||||||       || |||||||    
T  54631690 tataatccggaatgacgttttcttttgttaaagggtggaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaagtatggcgcgt 54631591  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacac-catttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    ||||||||||||  |||||||||||||||||||||||||||||||   |||||||| |||||||||||| ||||||| ||||  || |||||||||||||    
T  54631590 tacatgatgtttccggattacataatccggaaaccccctaaacacatttttttcaaggtaaaacagttcggattatacaatctgaactgtatcagcacaa 54631491  T
Q  241 attcta 246  Q
    ||||||    
T  54631490 attcta 54631485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 138 - 316
Target Start/End: Complemental strand, 41413231 - 41413051
Alignment:
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatata--atccaaattgtatcag 235  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||  ||||| || |||||| ||||| |||||||||  |||| || ||||||||    
T  41413231 gcgttacatgatgtttccggattacataatccggaaaccccctaaacactcttttttaaggtaaaatagttcggattatatataatccgaactgtatcag 41413132  T
Q  236 cacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||| || ||||||    
T  41413131 cacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattttgtttt 41413051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 39 - 263
Target Start/End: Original strand, 23523842 - 23524068
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||| ||||||| ||||||| ||||||| ||| ||||||||| ||| |||||||||| |||||||| ||||||||||||||       |||| |    
T  23523842 atttcataattcggaatgatgttttcctttgttagagggtgaaaaatggagttacggattttttcggattttgtaatccggaaacttcaaaaaataggac 23523941  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaaca-ccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagc 236  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||| || ||||| || |||||| | ||| |||||||||||||| | |||||||||    
T  23523942 gcgttacatgatgtttccggattacataatccagaaaccccctaaacaccctttttttaaggtaaaataattcggattatataatccacactgtatcagc 23524041  T
Q  237 acaaattctaaacatgtttgtaacatg 263  Q
    |||||| |||||||| |||||||||||    
T  23524042 acaaatcctaaacatatttgtaacatg 23524068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 51 - 256
Target Start/End: Original strand, 29822568 - 29822773
Alignment:
Q  51 ggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgat 149  Q
    |||||||||||| |||| |||| ||| ||||||||| ||| |||| |||||||||||||| ||||||||||||||       ||  ||||||||||||||    
T  29822568 ggaatggtgtttccttt-gttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatacagcgcgttacatgat 29822666  T
Q  150 gtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaac 249  Q
    ||||  ||||||||||||||||||||||| |||||||| | |||||| |||||||| ||| ||||||||||||| || ||||||||||||||||||||||    
T  29822667 gttttcggattacataatccggaaaccccataaacaccctctttcaaggtaaaacaattcggattatataatccgaactgtatcagcacaaattctaaac 29822766  T
Q  250 atgtttg 256  Q
    |||||||    
T  29822767 atgtttg 29822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 9 - 196
Target Start/End: Complemental strand, 25539209 - 25539021
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggatt 107  Q
    |||||||||||||||||| | |||||| | |||| ||||||||||||||||||||| ||||||| | | ||||||||| ||| |||| ||||||||||||    
T  25539209 ttttttccaaaaatgtccctgagtttccggatttcataatccggaatggtgttttcctttgttatatggtgaaaaatggagttacgggtttttccggatt 25539110  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaa 196  Q
    || ||||||||||||||       ||||||  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  25539109 ttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttctggattacataatccggaaaccccctaaacactatttttcaa 25539021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 53894083 - 53893978
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53894083 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatccttc 53893984  T
Q  311 tgtttt 316  Q
    ||||||    
T  53893983 tgtttt 53893978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 25539019 - 25538930
Alignment:
Q  229 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  25539019 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttg 25538930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 25752335 - 25752227
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||    
T  25752335 tccgaaacttccccagaaaatcagaaaagattcaaggaccatgactcccttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatc 25752236  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  25752235 gtttagacc 25752227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 321 - 426
Target Start/End: Original strand, 7931933 - 7932038
Alignment:
Q  321 cgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgt 420  Q
    ||||| || |||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  7931933 cgaaactttcccagaaaatcagaaaaaattcaaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgt 7932032  T
Q  421 ttagac 426  Q
    ||||||    
T  7932033 ttagac 7932038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 41323132 - 41323043
Alignment:
Q  229 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  41323132 gtatcaacacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttttgtttttg 41323043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 7863539 - 7863655
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||| ||||||||||||  || |||||| ||||||||||||||||||||||||||||||| | |||||||| ||||||||||||| ||||||||    
T  7863539 aaaacagttcggattatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatattaatattcctaac 7863638  T
Q  300 tctcatccttctgtttt 316  Q
    | | |||||||||||||    
T  7863639 ttttatccttctgtttt 7863655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 46440164 - 46440057
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| ||||||||||||||||  |||    
T  46440164 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccaaagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatc 46440065  T
Q  419 gtttagac 426  Q
    ||||||||    
T  46440064 gtttagac 46440057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 321 - 427
Target Start/End: Complemental strand, 48318954 - 48318848
Alignment:
Q  321 cgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgt 420  Q
    ||||||||||||||||||| |||||||||||||||||||||| || | | ||||||||||||||| | |||||||| ||||||||||||||||| |||||    
T  48318954 cgaaatttccccagaaaatcagaaaaaattcaaggaccatgactctcctggaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgt 48318855  T
Q  421 ttagacc 427  Q
    |||||||    
T  48318854 ttagacc 48318848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 225 - 316
Target Start/End: Complemental strand, 27742158 - 27742066
Alignment:
Q  225 aattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg-acaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  27742158 aattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctgtttt 27742066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 323 - 429
Target Start/End: Complemental strand, 25491283 - 25491177
Alignment:
Q  323 aaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttt 422  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| | || | |||| | ||||||||||||||||| |||||||    
T  25491283 aaatttccccagaaaatcagaaaaagttcaaggaccatgactcccttagaagggacttctcaagggattccgtccctcaaaatccaaaattccatcgttt 25491184  T
Q  423 agaccaa 429  Q
    |||||||    
T  25491183 agaccaa 25491177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 327 - 429
Target Start/End: Complemental strand, 54631376 - 54631274
Alignment:
Q  327 ttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||||| |||||||  |||||||| |||||||| |||||||||||    
T  54631376 ttccccagaaaatcagaaaaaattcaaggaccatgactcccatagaaaggacttcttacgggactccgcacctcaaaatacaaaattccatcgtttagac 54631277  T
Q  427 caa 429  Q
    |||    
T  54631276 caa 54631274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 14474280 - 14474165
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    ||||||||||| |||||||||||  |||||||||| |||||||| | ||||||||||||||||||||||||  |||| | ||||||||||||||||||||    
T  14474280 aaaacagttcatattatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatagtc-gtttaagaacaatattaatcttcctaac 14474182  T
Q  300 tctcatccttctgtttt 316  Q
     ||||||||||| ||||    
T  14474181 cctcatccttctatttt 14474165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 19835795 - 19835903
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| |||||||||||||| ||||||| |||| || |||||||||||||||| |||||||| ||||||||||||||||| ||     
T  19835795 tccgaaactttcccagaaaatcagaaaaaattcaagtaccatgactcccctaaaagggacttcttacgggactccgcccctcaaaatccaaaattccatt 19835894  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  19835895 gtttagacc 19835903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 52077017 - 52077101
Alignment:
Q  156 ggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||| |||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  52077017 ggatcacataatccggaaacctcctaaataccatttttcaaggtaaaacagttcagattatataattcaaattgtatcagcacaa 52077101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 25538870 - 25538763
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    |||||||  |||||||||||| ||||||| |||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||| | |||    
T  25538870 tccgaaacatccccagaaaatcagaaaaatttcaaggaacatgactcccttagaagagacttcttacgggactccgcccctcaaaatccaaaataccatc 25538771  T
Q  419 gtttagac 426  Q
    ||||||||    
T  25538770 gtttagac 25538763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 8106669 - 8106775
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||| ||||| |||||||||||||||| ||||| |||| ||||||| ||||||||||| |||||||| ||||||||| |||||| ||||    
T  8106669 tccgaaacttccccaaaaaatcagaaaaaattcaaggatcatgactcccgtagaaggaacttcttacgggactccgcctctcaaaatcaaaaattaaatc 8106768  T
Q  419 gtttaga 425  Q
    |||||||    
T  8106769 gtttaga 8106775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 203 - 305
Target Start/End: Original strand, 27879649 - 27879751
Alignment:
Q  203 acagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactct 302  Q
    ||||||||||||||||||||  || |||||||||||||||||| |||||| |||||||||| || ||||||||| |||| |||||||| |||||||||||    
T  27879649 acagttcagattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactct 27879748  T
Q  303 cat 305  Q
    |||    
T  27879749 cat 27879751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 182 - 316
Target Start/End: Original strand, 32600920 - 32601054
Alignment:
Q  182 aacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggac 281  Q
    |||| |||||||||| | ||||||||||||||||||| ||   ||||||||||||||||||||| |||||| |||||||||||  |||||||||| ||||    
T  32600920 aacatcatttttcaaggaaaaacagttcagattatatgatatgaattgtatcagcacaaattctgaacatgcttgtaacatggccagtcattttaaggac 32601019  T
Q  282 aatattaatcttcctaactctcatccttctgtttt 316  Q
     |||||||| |||||| ||| |||  |||||||||    
T  32601020 catattaatattcctacctcgcataattctgtttt 32601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 330 - 427
Target Start/End: Original strand, 38536457 - 38536554
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||| |||||||||||||||||||| | ||| |||||| |||||||||| || |||||||| ||||||||||||||||| ||||||||||||    
T  38536457 cccagaaaatcagaaaaaattcaaggaccataactcctttagaaaggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacc 38536554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 40703942 - 40704043
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||||||||| |||||||||||||||||||||| | | |||||||| ||||||||||| |||||||| ||||||||| ||||||| ||||||    
T  40703942 gaaacttccccagaaaatcagaaaaaattcaaggaccatgacttcattagaaggaacttcttacgggactccgcccctcaaaatctaaaattccatcgtt 40704041  T
Q  422 ta 423  Q
    ||    
T  40704042 ta 40704043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 47873953 - 47874024
Alignment:
Q  245 taaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  47873953 taaacatgtttataacatggatagtcattttagggacaatattaatcttcttaattctcatccttctgtttt 47874024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 414
Target Start/End: Original strand, 52089541 - 52089624
Alignment:
Q  331 ccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattc 414  Q
    ||||||||| |||||||||||||||||||| | |||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  52089541 ccagaaaatcagaaaaaattcaaggaccataactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattc 52089624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 47784101 - 47784202
Alignment:
Q  215 atataatccaaattgtatcagcacaaattctaaacat-gtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgt 313  Q
    ||||||||| || | |||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| ||||||||||||| | |||||    
T  47784101 atataatccgaactatatcagcacaaattctaaacattgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactctcattcatctgt 47784199  T
Q  314 ttt 316  Q
    |||    
T  47784200 ttt 47784202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 427
Target Start/End: Original strand, 34973142 - 34973247
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||| | |||||||||||||||||||||||||||| || | || |||||||||||| ||| |||||||| ||||||||||||||||| || |||    
T  34973142 gaaacttccctataaaattagaaaaaattcaaggaccatgactctcctaaaagggacttctttcgggactccgcccctcaaaatccaaaattccattgtt 34973241  T
Q  422 tagacc 427  Q
    ||||||    
T  34973242 tagacc 34973247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 49002911 - 49002822
Alignment:
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 301  Q
    |||||||| |||||| | ||||||||||||||||||| |||||||||||||  |||||||||||| ||| ||||||||||||||||||||    
T  49002911 attatatattccaaactatatcagcacaaattctaaatatgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 17933029 - 17932921
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||| | |||||||| |  | |||||| ||||||||||||||||| ||     
T  17933029 tccgaaacttctccagaaaatcagaaaaaattcaaggaccatgactcccttagaaagaacttcttaagagattccgcctctcaaaatccaaaattccata 17932930  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  17932929 gtttagacc 17932921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 18051081 - 18050973
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| | |||||| ||||||||||||| |||| ||||||| |||| |||||| | |||||| ||||||||||||||||| |||    
T  18051081 tccgaaactttcccagaaaatcaaaaaaaaatcaaggaccatgactcccgtagaaggaactttttacgggattccgcccctcaaaatccaaaattccatc 18050982  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  18050981 gtttagacc 18050973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 426
Target Start/End: Original strand, 29822866 - 29822962
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    |||||| ||| |||||||||||||||||||||| |||| ||||||||||||| ||||| |||| ||| |||||||| |||||||| |||||||||||    
T  29822866 cccagacaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcctacgggactctgcccctcaaaattcaaaattccatcgtttagac 29822962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 52089315 - 52089395
Alignment:
Q  232 tcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctg 312  Q
    |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||||    
T  52089315 tcagcacaaatcttaaacatgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcattcttctg 52089395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 179 - 316
Target Start/End: Original strand, 37222037 - 37222175
Alignment:
Q  179 ctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttag 277  Q
    ||||||||| |||||||| | |||| |||||| |||||||||||   ||||||||||||| |||||||||||||||||||||||||||||  || ||||     
T  37222037 ctaaacaccctttttcaagggaaaaacagttcggattatataatttgaattgtatcagcataaattctaaacatgtttgtaacatggataaccactttaa 37222136  T
Q  278 ggacaatattaa-tcttcctaactctcatccttctgtttt 316  Q
    |||| ||||||| ||||| ||| ||||||| |||||||||    
T  37222137 ggaccatattaattcttcttaa-tctcatcattctgtttt 37222175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 53894224 - 53894108
Alignment:
Q  37 gaattttataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagg 135  Q
    ||||| |||||||||||||| ||||||||||||||||||| || |||||||| |||||| ||||||||||||||  |||| ||||||||       ||||    
T  53894224 gaattatataatccggaatgatgttttcttttgttaaagggtgaaaaaatgactaacgggtttttccggattttgcaatcaggaaacttcaaaaaatagg 53894125  T
Q  136 gcgcgttacatgatgtt 152  Q
    |||||||||||||||||    
T  53894124 gcgcgttacatgatgtt 53894108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 25140753 - 25140675
Alignment:
Q  231 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 309  Q
    |||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||    
T  25140753 atcagcaccaattctgaacatgtttgtaacatggatagtcattttgaggacaatattaatcttcctagctttcatcctt 25140675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 327 - 428
Target Start/End: Original strand, 38417075 - 38417175
Alignment:
Q  327 ttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    ||||||| |||||||||||| ||||||||||||||| || | ||||||||||||||||| | ||||||||  |||||||||||||||  |||||||||||    
T  38417075 ttccccaaaaaattagaaaa-attcaaggaccatgactcacgtagaagggacttcttacaggactccgcccttcaaaatccaaaatttcatcgtttagac 38417173  T
Q  427 ca 428  Q
    ||    
T  38417174 ca 38417175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 6003554 - 6003455
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagaccaa 429  Q
    |||| ||||| ||||||||||||| |||||||| | || || ||||| |||||||||| |||||||| ||||||||||||||||| || |||||||||||    
T  6003554 cccaaaaaatcagaaaaaattcaaagaccatgacttccataaaaggggcttcttacgggactccgcccctcaaaatccaaaattctattgtttagaccaa 6003455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 278
Target Start/End: Original strand, 38416925 - 38417004
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaaca-tggatagtcattttagg 278  Q
    ||||||||||| |||||||||||  || |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  38416925 aaaacagttcaaattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacattggatagtcattttagg 38417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 25140544 - 25140466
Alignment:
Q  231 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 309  Q
    |||| ||| |||||| ||||||||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||    
T  25140544 atcaacaccaattctgaacatgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctcatcctt 25140466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 25140944 - 25140874
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || | |||||| |||||||    
T  25140944 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctagctttgatccttgtgttttt 25140874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 2505923 - 2505819
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || | |||||||  |||||| ||||||||||||||| ||||  |||||||||||||||||| | || ||| ||||||||||||||||| |||    
T  2505923 tccgaaactttctcagaaaagcagaaaacattcaaggaccatgactccccaagaagggacttcttacgggattctgcccctcaaaatccaaaattctatc 2505824  T
Q  419 gttta 423  Q
    |||||    
T  2505823 gttta 2505819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 6228689 - 6228597
Alignment:
Q  335 aaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||| |||||||||||||| ||||||| |||| ||||||| ||||||||| | ||||| || ||||||||||||||||| || |||||||||    
T  6228689 aaaatcagaaaaaattcaagaaccatgactcccgtagaaggaacttcttacaggactcctcccctcaaaatccaaaattccattgtttagacc 6228597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 405
Target Start/End: Original strand, 32442088 - 32442171
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaat 405  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||| || | | |||| ||||||||    
T  32442088 gaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaagagacttcttatgggatttcgcccctcaaaat 32442171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 351 - 425
Target Start/End: Complemental strand, 49001415 - 49001341
Alignment:
Q  351 caaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttaga 425  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||  ||||||||||||||||  ||||||||||    
T  49001415 caaggatcatgactcccttagaagggacttcttacgggactccgctcctcaaaatccaaaattacatcgtttaga 49001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 427
Target Start/End: Complemental strand, 53893904 - 53893810
Alignment:
Q  333 agaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||| ||||||||||  |||||||| | |||| |||||||||||||||| ||  ||||||| ||||||||||||||||  ||||||||||||    
T  53893904 agaaaatcagaaaaaatttcaggaccatcactcccgtagaagggacttcttatgggtctccgcccctcaaaatccaaaatttcatcgtttagacc 53893810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 396
Target Start/End: Original strand, 52089468 - 52089537
Alignment:
Q  327 ttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgcc 396  Q
    ||||||||||||| |||||||||||||||||||| | || | ||||||||||||||||||| ||||||||    
T  52089468 ttccccagaaaatcagaaaaaattcaaggaccataactctcatagaagggacttcttacgggactccgcc 52089537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 27181544 - 27181473
Alignment:
Q  245 taaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    ||||||||||||||||||||||||||||||||   | |||||||||| ||||||||||||||||| |||||||    
T  27181544 taaacatgtttgtaacatggatagtcattttaaaaataatattaatc-tcctaactctcatccttgtgttttt 27181473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 31582297 - 31582214
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||| |||||||| | ||||||||||||||||||  || | |||||| ||||||||||||||||| ||||||||||||    
T  31582297 aaaaaattcaaagaccatgatttccttagaagggacttcttttgg-attccgcccctcaaaatccaaaattccatcgtttagacc 31582214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 50392635 - 50392557
Alignment:
Q  45 taatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttataatccggaaa 121  Q
    |||||||||| ||||||||| ||||||||||  |||||||  ||||| ||||||||||||||||||| |||||||||||    
T  50392635 taatccggaacggtgttttcctttgttaaagagtgaaaaaaatgagttacggatttttccggattttgtaatccggaaa 50392557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 413
Target Start/End: Original strand, 23524078 - 23524156
Alignment:
Q  335 aaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaatt 413  Q
    ||||| |||||||||||||||||||||| ||||  ||||||||||| ||| || ||| |||| ||||||||||||||||    
T  23524078 aaaatcagaaaaaattcaaggaccatgactcccgaagaagggacttattatgggacttcgcccctcaaaatccaaaatt 23524156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 27742005 - 27741899
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    |||||||  ||||| |||||| ||||||||||  |||| ||||  |||| ||||||| |||||||| || |||||||| ||||||||||||||||| ||     
T  27742005 tccgaaacatcccccgaaaatcagaaaaaattggaggatcatgcctcccgtagaaggaacttcttatgggactccgcccctcaaaatccaaaattccatt 27741906  T
Q  419 gtttaga 425  Q
    |||||||    
T  27741905 gtttaga 27741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 42660411 - 42660338
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    |||||| |||||| | ||||||||||| || ||||||||||||| |||||||||||||||||||| || |||||    
T  42660411 cagcaccaattctgagcatgtttgtaatattgatagtcattttaaggacaatattaatcttcctagctttcatc 42660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 427
Target Start/End: Original strand, 49397297 - 49397394
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||| ||||| |||||||||||||||||||||| ||||| |||||  |||||||| || | || ||| ||||||||||||||||  || |||||||||    
T  49397297 cccaaaaaatcagaaaaaattcaaggaccatgactccctaagaagaaacttcttatgggattcggcccctcaaaatccaaaatttcattgtttagacc 49397394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 54631486 - 54631445
Alignment:
Q  275 tagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  54631486 tagggacaatattaatcttcctaactctcatccttctgtttt 54631445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 372017 - 372135
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatct--tccta 297  Q
    |||| ||||| |||||||| |||  || |||||||||||||||| | | ||||||| ||||||||||||||||||||  ||| |||||||| |  || ||    
T  372017 aaaatagttcggattatatcatctcaactgtatcagcacaaattatgagcatgtttataacatggatagtcattttaaagaccatattaatattctcata 372116  T
Q  298 actctcatccttctgtttt 316  Q
    | | |||||||||||||||    
T  372117 attttcatccttctgtttt 372135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 346260 - 346135
Alignment:
Q  174 accccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcatt 273  Q
    ||||| ||||||||||| ||||| | |||||||||||||||||| ||||  || ||||||| ||||||||    || | |||||||||||||||| || |    
T  346260 accccttaaacaccattattcaagggaaaacagttcagattatagaatctgaactgtatcaacacaaatt-acgacttatttgtaacatggataggcaat 346162  T
Q  274 ttagggacaatattaatcttcctaact 300  Q
    ||| ||   ||||||||||||||||||    
T  346161 ttaagggtcatattaatcttcctaact 346135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 38416518 - 38416649
Alignment:
Q  56 ggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgttta 154  Q
    ||||||||| ||||||| ||| ||||||| |||||  ||||||||| |  ||||| |||||||||||| |       |||||| ||||||||||| |||     
T  38416518 ggtgttttcctttgttatagggtgaaaaaatgagttgcggattttttcaaattttgtaatccggaaacataaaaaaatagggcacgttacatgatttttt 38416617  T
Q  155 tggattacataatccggaaaccccctaaacac 186  Q
     ||||||||||||||| | |||||||||||||    
T  38416618 cggattacataatccgaacaccccctaaacac 38416649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 42497939 - 42497829
Alignment:
Q  206 gttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    |||| ||||||||||||  ||||||||||||||||||| | | | |||||||||| |  ||||  | |||| |||| ||||||||||| |||||||||||    
T  42497939 gttcggattatataatctgaattgtatcagcacaaattatgagcttgtttgtaacttatatagctagtttaaggaccatattaatctttctaactctcat 42497840  T
Q  306 ccttctgtttt 316  Q
    | || ||||||    
T  42497839 cattttgtttt 42497829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 1788092 - 1788208
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||| |||||||||||||||||||||| |||||||||||  ||| | |  |||||  ||||||| |||  || ||||  ||  |||||||||||| ||||    
T  1788092 aaaatagttcagattatataatccaaactgtatcagcacggattatgagtatgttgttaacatgaataaccagtttaatgatcatattaatcttcataac 1788191  T
Q  300 tctcatccttctgtttt 316  Q
    |||||| ||||||||||    
T  1788192 tctcattcttctgtttt 1788208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 3703123 - 3703039
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||| || ||||| ||||||||||  ||||||||| || |||||| |  |||||||||||||||| ||||||| ||||    
T  3703123 aaaaaattcaaagatcatgactcccttagaaatgacttcttatgggactccgtccttcaaaatccaaaattccatcgtttggacc 3703039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 427
Target Start/End: Complemental strand, 14474055 - 14473999
Alignment:
Q  371 gaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||||||    
T  14474055 gaagggacttcttacgggactccgcccctcaagatccaaaatttcatcgtttagacc 14473999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 18487733 - 18487617
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||| ||||||||||||||||  |||||||||| |||||||| | |   |||||||||||||||||   | ||||  ||| ||||| |||||| |||     
T  18487733 aaaacaattcagattatataatctgaattgtatcatcacaaattttgagtctgtttgtaacatggataactagtttaacgaccatatttatcttcataat 18487634  T
Q  300 tctcatccttctgtttt 316  Q
    |||||| ||||||||||    
T  18487633 tctcattcttctgtttt 18487617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 427
Target Start/End: Original strand, 32601169 - 32601221
Alignment:
Q  375 ggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||  || |||||||||||||||||||||||||| ||||||||||||    
T  32601169 ggacttcttgggggactccgccgctcaaaatccaaaattccatcgtttagacc 32601221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 41322984 - 41322877
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| | |||||||||| ||| || || ||   |||||| |||||||||||| | |||||| |||||||||| | |||| |||    
T  41322984 tccgaaagttccccagaaaatcataaaaaattcacggatcaagattcttgtagaagagacttcttacgggattccgcccctcaaaatcc-atattccatc 41322886  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  41322885 gtttagacc 41322877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 37222286 - 37222347
Alignment:
Q  366 ccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||| ||||||||||  ||||| || ||||||||||||||||| | ||||||||||    
T  37222286 ccttagaaggaacttcttacgagactcctcccctcaaaatccaaaattccaacgtttagacc 37222347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 42660519 - 42660430
Alignment:
Q  10 tttttccaaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatt 97  Q
    |||||||||||||  |||| | ||||| | |||||||||||| |||| |||||||| ||||||||||| || |||||||||| |||||||    
T  42660519 tttttccaaaaatacccttgaagtttccggattttataatccagaatagtgttttcctttgttaaagggtgaaaaaatgagttacggatt 42660430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 47456749 - 47456814
Alignment:
Q  251 tgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||   | |||| |||| |||||||||||||||| |||||||||| ||||||    
T  47456749 tgtttgtaacatggataactagtttaaggaccatattaatcttcctaaatctcatccttatgtttt 47456814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 423
Target Start/End: Original strand, 47456875 - 47456984
Alignment:
Q  319 tccgaaatttccccagaaaattag-----aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaatt 413  Q
    ||||||| ||||||||||||| ||     |||||| ||||||| || || |||  |||||| ||||||||| || |||||| | ||||||||||||||||    
T  47456875 tccgaaacttccccagaaaatcagaagaaaaaaaaatcaaggatcaagactcctctagaagagacttcttatggaactccgtccctcaaaatccaaaatt 47456974  T
Q  414 caatcgttta 423  Q
    | ||||||||    
T  47456975 ccatcgttta 47456984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 52076956 - 52077036
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaa-atgagtaacggatttttccggattttataatccggaaac 122  Q
    ||||||| | |||| ||||||||||||||||| | |||||| |||||||| || |||||||||||   |||||||||||||    
T  52076956 tataatcggaaatgatgttttcttttgttaaatggtgaaaagatgagtaatgggtttttccggatcacataatccggaaac 52077036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 37770079 - 37770020
Alignment:
Q  250 atgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 309  Q
    |||||||||||||| ||||||| ||||  ||| |||||||||| |||||||||| |||||    
T  37770079 atgtttgtaacatgaatagtcaatttaatgaccatattaatctccctaactctcgtcctt 37770020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 423
Target Start/End: Complemental strand, 53836119 - 53836072
Alignment:
Q  376 gacttcttacggcactccgccgctcaaaatccaaaattcaatcgttta 423  Q
    |||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  53836119 gacttcttacgggactccgtccctcaaaatccaaaattctatcgttta 53836072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 18051161 - 18051103
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaa-cggatttt 99  Q
    ||||||| |||||| ||||||||||||||||||| || |||||||||||| ||||||||    
T  18051161 tataatctggaatgatgttttcttttgttaaagggtgaaaaaatgagtaatcggatttt 18051103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 48095704 - 48095646
Alignment:
Q  369 tagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||||||| ||| ||||||||  ||||||||| |||||| |||| |||||||    
T  48095704 tagaagggacttcttgcgggactccgcctttcaaaatccgaaattccatcgattagacc 48095646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 4936590 - 4936506
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| ||| ||| || || |||||||||||  |||||||| || |||||| | ||||||||||||||||  ||| ||||||||    
T  4936590 aaaaaaatcatggatcaagactcccttagaagatacttcttatgggactccgtccctcaaaatccaaaatttcatcttttagacc 4936506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 423
Target Start/End: Complemental strand, 25140862 - 25140805
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttta 423  Q
    |||||||||||||||||||||||  |||||||  |  ||||||||||||| |||||||||    
T  25140862 tcccttagaagggacttcttacgagactccgc--cataaaatccaaaatttaatcgttta 25140805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 30060268 - 30060220
Alignment:
Q  214 tatataatccaaattgtatcagcacaaattctaaacatgtttgtaacat 262  Q
    ||||||||| ||||||||||||||||||  || | ||||||||||||||    
T  30060268 tatataatctaaattgtatcagcacaaagactgagcatgtttgtaacat 30060220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 97)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 38871530 - 38871839
Alignment:
Q  8 attttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaag-gatgaaaaatgagtaacggatttttccggat 106  Q
    ||||||| ||||||| ||||| |||||  | ||||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||    
T  38871530 atttttttcaaaaatatccttgagttttcggattttataatccggaatggtgttttcttttgttaaaaagttaaaaaatgagtaacggatttttccggat 38871629  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    ||| ||||||| ||||||       ||||| ||||||||||||||||  ||||||||||||||| |||||| ||||||| | |||||||| |||||||||    
T  38871630 tttgtaatccgaaaacttcataaaatagggggcgttacatgatgtttccggattacataatccgaaaaccctctaaacatcttttttcaaggtaaaacag 38871729  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    ||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38871730 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaataataatcttcctaactctcatc 38871829  T
Q  307 cttctgtttt 316  Q
    ||||||||||    
T  38871830 cttctgtttt 38871839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 316
Target Start/End: Original strand, 20891471 - 20891781
Alignment:
Q  8 attttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccgga 105  Q
    |||||||||||||||| |||| ||| || | ||||||||||||| |||||||||||||||| ||||| | |||||||  |||||||||||||||||||||    
T  20891471 attttttccaaaaatgcccttgagtatccggattttataatccgaaatggtgttttcttttattaaatggtgaaaaaaatgagtaacggatttttccgga 20891570  T
Q  106 ttttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaaca 205  Q
    |||| ||||||||||||||       ||||||  ||||||||||||||  | ||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  20891571 ttttgtaatccggaaacttcaaaaaatagggcatgttacatgatgtttccgaattacataatccgaaaaccccctaaacaccctttttcaaggtaaaaca 20891670  T
Q  206 gttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    |||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20891671 gttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactctcat 20891770  T
Q  306 ccttctgtttt 316  Q
    |||||||||||    
T  20891771 ccttctgtttt 20891781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 39 - 318
Target Start/End: Original strand, 6156621 - 6156901
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||||||||||| ||||||| | | ||||||||| ||| |||| |||||||||||||| ||||||||||||||       ||||||    
T  6156621 atttcataatccggaatggtgttttcctttgttatatggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggc 6156720  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| | |||||| ||||||| |||| ||||||||||| | |||||||||||||    
T  6156721 gcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctctttcaaggtaaaaccgttcggattatataatacgaattgtatcagca 6156820  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6156821 taaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 6156901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 16 - 318
Target Start/End: Original strand, 33487477 - 33487780
Alignment:
Q  16 caaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataat 114  Q
    ||||||||||||| |||||| | |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| |||| |||||||| ||||| ||||    
T  33487477 caaaaatgtccttgagtttccggatttcataatccggaatggtgttttcctttgttacagggtgaaaaatggagttacgggtttttccgaattttgtaat 33487576  T
Q  115 ccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagatt 214  Q
    ||| ||||||       |||||||||||| |||||||||  || ||||||||||||||||| |||||||||||  ||||||| |||||||||||| ||||    
T  33487577 ccgaaaacttcaaaaaatagggcgcgttatatgatgttttcgggttacataatccggaaactccctaaacaccccttttcaaggtaaaacagttcggatt 33487676  T
Q  215 atataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtt 314  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33487677 atataatccgaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttcagtt 33487776  T
Q  315 tttg 318  Q
    ||||    
T  33487777 tttg 33487780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 13 - 318
Target Start/End: Complemental strand, 4064977 - 4064671
Alignment:
Q  13 ttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttat 111  Q
    ||||||||||| |||| |||||| | |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| |||| |||||||||||| | |    
T  4064977 ttccaaaaatgcccttgagtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattatgt 4064878  T
Q  112 aatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcag 211  Q
    |||||||||||||       ||||||| |||| |||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||||||      
T  4064877 aatccggaaactttaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcga 4064778  T
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  4064777 attatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttct 4064678  T
Q  312 gtttttg 318  Q
     ||||||    
T  4064677 atttttg 4064671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 15799115 - 15799393
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||||| ||||| ||||||| ||| ||||||||| ||| |||| |||||||||||||| ||||||||||||||       ||||||    
T  15799115 atttcataatccggaatggtattttcctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaatagggc 15799214  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||| || ||||||||||    
T  15799215 gcgttacatgatgtttccggattacataatccgaaaaccccctaaacaccctttttcaacgtaaaacatttcagattatataatccgaactgtatcagca 15799314  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||    
T  15799315 caaattctaaacatgtttgtaacatggatagtcattttatggacaatattattcttcctaattcgcatccttctgtttt 15799393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 33 - 318
Target Start/End: Complemental strand, 28083615 - 28083329
Alignment:
Q  33 ttctgaattttataatccggaatggtgttttcttttgttaaaggatga-aaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnn 131  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||| ||           
T  28083615 ttctggattatataatccggaatgatgttttcttttgttaaagggtgagaaaatgagtaacgggtttttccggattttgtaatccggaaaattcaaaaaa 28083516  T
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgta 231  Q
    |||||||| ||||||||| |||  |||||||||||||||||||||| ||||||||| |||||||| |||||||||| | ||||||||||||| || ||||    
T  28083515 tagggcgcattacatgatatttccggattacataatccggaaaccctctaaacaccctttttcaacgtaaaacagtccggattatataatccgaactgta 28083416  T
Q  232 tcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  28083415 tcagcacaaattataaacatatttgtaacatggatagtcattttagggacaatattaatctttctaactttcatccttctgtttttg 28083329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 8 - 302
Target Start/End: Original strand, 15957609 - 15957903
Alignment:
Q  8 attttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggatt 107  Q
    |||||||||||||||| | || |||||  | ||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  15957609 attttttccaaaaatgcctttgagttttcggattttataatccgaaatggtgttttcttttgttaaagggtgaaaaatgagtaatggatttttccggatt 15957708  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || |||| |||||||||       |||||||  |||||||||||||  |||||| |||||||||||||||||||||||||  ||||||| ||||||||||    
T  15957709 ttgtaattcggaaacttcgaaaaatagggcgtattacatgatgtttccggattaaataatccggaaaccccctaaacacccattttcaaggtaaaacagt 15957808  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactct 302  Q
    |  ||||||||||||  || |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  15957809 ttggattatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagtaattttagggacaatattaatcttcctaactct 15957903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 9 - 291
Target Start/End: Original strand, 25746886 - 25747168
Alignment:
Q  9 ttttttccaaaaatgtccttt-agtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggatt 107  Q
    |||| |||||||||| || || |||||| | |||||||||| ||||||| ||||||||||||||||| |   ||||||||||||||||||||||||||||    
T  25746886 ttttctccaaaaatgccccttgagtttccggattttataattcggaatgatgttttcttttgttaaaagtgaaaaaatgagtaacggatttttccggatt 25746985  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || ||||||||||||||       ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  25746986 ttctaatccggaaacttcaaaaa-tagggcgcgttacatgatgttttcggattacataatccggaaatcccctaaacaccattttttaaggtaaaacagt 25747084  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatc 291  Q
    || ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25747085 tcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 45 - 316
Target Start/End: Original strand, 39524672 - 39524944
Alignment:
Q  45 taatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgtta 143  Q
    ||||||| |||| ||||||||||||||||||| ||||||| |||| || ||||||||||||||||| ||||||||||||||       ||||||| ||||    
T  39524672 taatccgaaatgatgttttcttttgttaaagggtgaaaaaatgagcaatggatttttccggattttgtaatccggaaacttaaaaaaatagggcgtgtta 39524771  T
Q  144 catgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaatt 243  Q
    ||||||||||  |||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| || ||||||| ||||||||    
T  39524772 catgatgttttcggattacataattcggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcatcacaaatt 39524871  T
Q  244 ctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39524872 ctaaacatatttgtaatatgtatagtcattttaggaacaatattaatcttcctaactctcatccttctgtttt 39524944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 38693010 - 38692736
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggattttt-ccggattttataatccggaaacttnnnnnnntagggcgcg 140  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||||||| ||||| ||| ||||| ||||||||||||||       |||||||||    
T  38693010 tataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggttttttccgaattttgtaatccggaaacttaaaaaaatagggcgcg 38692911  T
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||| ||||||||  ||||||||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||||| || |||||||||||||    
T  38692910 ttacgtgatgtttccggattacataatccggaaacccc-taaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaa 38692812  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||||||| |||||||||    
T  38692811 attctaaacatgtttgtaacatggataatcattttaaggacaatattaatattcataactctcatctttctgtttt 38692736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 40620217 - 40619942
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||||  |||| |||||||||||||| |||| ||||||| |||||||| |||||||||||||||| ||||||||||||||       |||||| |||    
T  40620217 tataatccataatgatgttttcttttgttgaagggtgaaaaaatgagtaacagatttttccggattttgtaatccggaaacttcaaaaaatagggcacgt 40620118  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    || |||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||| ||||||||||| |||||    
T  40620117 tatatgatgttttcggattacataatccggaaaccccctaaacatcatttttcaaggtaaaatatttcagattatataatccgaattgtatcagtacaaa 40620018  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat-ccttctgtttt 316  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40620017 ttctaaacatgcttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatcccttctgtttt 40619942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 61 - 305
Target Start/End: Original strand, 38372221 - 38372466
Alignment:
Q  61 tttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggat 159  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||||||       ||||||| ||||||||||||||  ||||    
T  38372221 tttcttttgttaaagggtgaaaaaatgagtaacggatttttctggattttgtaatccggaaacttaaaaaaatagggcgggttacatgatgtttccggat 38372320  T
Q  160 tacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaa 259  Q
    |||||||| |||||||||| |||| ||| |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| |    
T  38372321 tacataattcggaaaccccttaaataccctttttcaaggtaaaacagttcagattatataatccgaactgtattagcacaaattctaaacatgtttgtta 38372420  T
Q  260 catggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38372421 catggatagtcattttagggacaatattaatcttcctaactctcat 38372466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 24203941 - 24203637
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggatt 107  Q
    ||||||||||||||| | || |||||| | |||||||||||||||||||||||||||||||||||||| || |||||||| |||| ||||||| ||||||    
T  24203941 ttttttccaaaaatgccattgagtttccggattttataatccggaatggtgttttcttttgttaaagggtggaaaaatgattaacagattttttcggatt 24203842  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || |||||     ||||       ||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||| |  ||||||||||    
T  24203841 ttgtaatcg----acttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttagggtaaaacagt 24203746  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 307  Q
    || | ||||||||||| || |||||||||| ||||||||||||||||||||||  ||||| |||||||| ||||||||||||| ||||||||||||| ||    
T  24203745 tcgggttatataatccgaactgtatcagcataaattctaaacatgtttgtaactgggataatcattttaaggacaatattaatgttcctaactctcaacc 24203646  T
Q  308 ttctgtttt 316  Q
    |||||||||    
T  24203645 ttctgtttt 24203637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 135 - 316
Target Start/End: Complemental strand, 31221473 - 31221292
Alignment:
Q  135 ggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatca 234  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||    
T  31221473 ggcgcgttacatgatgtttctggattacataatccggaaaccctctaaacaccctttttcaaggtaaaacagttcggattatataatccaaactgtatca 31221374  T
Q  235 gcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31221373 gcacaaattataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatctttctgtttt 31221292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 132 - 318
Target Start/End: Original strand, 29862596 - 29862782
Alignment:
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgta 231  Q
    ||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| || ||||    
T  29862596 tagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagttcgaattatataatccgaactgta 29862695  T
Q  232 tcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  29862696 tcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatccttccgtttttg 29862782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 31929332 - 31929078
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgtt 142  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| ||       ||||||||       
T  31929332 tataatccggaatgatgttttcttttgttaaagggtgaaaaatgagtaacggatttttccggattttgtaatccagaaatttcaaaaaatagggcgc--- 31929236  T
Q  143 acatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaat 242  Q
                   ||||||||||||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||  || |||||||||||||||    
T  31929235 ---------------attacataatccggaaaccccctaaacaccccttttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaat 31929151  T
Q  243 tctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31929150 tttaaacatgtttgtaacatggatagtcatttta-ggacaatattaatcttcctaactctcatccttctgtttt 31929078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 44 - 302
Target Start/End: Complemental strand, 26190524 - 26190265
Alignment:
Q  44 ataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgtt 142  Q
    |||||| |||||||||||||| ||| |||  || ||||||||| ||| ||||||||||||||||||| ||||||||||||||       ||||| |||||    
T  26190524 ataatctggaatggtgttttcctttcttatcgggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggtgcgtt 26190425  T
Q  143 acatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaat 242  Q
    |||||||||||  |||||||||||| | ||||||||||||||||| ||||| || |||||| ||||| ||||||||||||| || |||||||||||||||    
T  26190424 acatgatgttttcggattacataattcagaaaccccctaaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagcacaaat 26190325  T
Q  243 tctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactct 302  Q
     |||||||| ||||||||||| |||| ||||||| ||| ||| ||||| |||||||||||    
T  26190324 cctaaacatatttgtaacatgtatagccattttaaggataattttaatattcctaactct 26190265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 37184009 - 37183734
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||  |||||||||||||||| || ||||||| |||||||| ||||||||  |||||| |||||  |||||||       |||||| |||    
T  37184009 tataatccggaataatgttttcttttgttaacgggtgaaaaaatgagtaacagatttttctagattttgtaatcttgaaacttcaaaaaatagggcacgt 37183910  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccattttt-caaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||||||| |||   ||||||||||||||||||||| ||||||||| ||||| ||| | ||||||||   ||||||||||||  || ||||||| |||||    
T  37183909 tacatgatattttcagattacataatccggaaaccctctaaacacccttttttcaaggcaaaacagtctggattatataatctgaactgtatcaacacaa 37183810  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  37183809 attctaaatatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatctttttgtttt 37183734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 92 - 316
Target Start/End: Complemental strand, 32842149 - 32841923
Alignment:
Q  92 cggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattt 191  Q
    |||||||||||||||||| ||||||||||||||       ||||||||| || || || |||   |||||||||||||| | ||||| |||||||| |||    
T  32842149 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacacccttt 32842050  T
Q  192 ttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg-acaatattaa 289  Q
    ||||| | |||| |||||| ||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32842049 ttcaagggaaaaacagttcggattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatattaa 32841950  T
Q  290 tcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||| ||||    
T  32841949 tcttcctaactctcatccttctatttt 32841923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 156 - 316
Target Start/End: Original strand, 26095099 - 26095260
Alignment:
Q  156 ggattacataatccggaaaccccctaaacaccatttttcaaagtaaaac-agttcagattatataatccaaattgtatcagcacaaattctaaacatgtt 254  Q
    ||||||||||||||| | ||||| |||||||  |||||||||| ||||  ||||| ||||||||||||  |||||||||| || ||||||||||||||||    
T  26095099 ggattacataatccgaacaccccataaacactctttttcaaaggaaaaatagttcggattatataatctgaattgtatcaacataaattctaaacatgtt 26095198  T
Q  255 tgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||| ||||    
T  26095199 tgtaacatggatagtcatattatggacaatattaatcttcttaactctcattcttctatttt 26095260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 14112094 - 14112202
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||    
T  14112094 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgaatcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattccatc 14112193  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  14112194 gtttagacc 14112202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 176 - 316
Target Start/End: Original strand, 26093473 - 26093614
Alignment:
Q  176 cccctaaacaccatttttcaaagtaaaac-agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattt 274  Q
    ||||||||||||||||||||| | ||||  ||||||||||||||||||| || | |||||||| ||||| | ||||||||| ||||||||||||||||||    
T  26093473 cccctaaacaccatttttcaatggaaaaatagttcagattatataatcctaactatatcagcataaattatgaacatgtttctaacatggatagtcattt 26093572  T
Q  275 tagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    || |||||| |||||||||| |||||||||||||||||||||    
T  26093573 tatggacaaaattaatcttcttaactctcatccttctgtttt 26093614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 189 - 316
Target Start/End: Original strand, 7884234 - 7884361
Alignment:
Q  189 tttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatatta 288  Q
    ||||| || ||||||||||||  |||||||||||  || ||||||| ||||||||||||| |||||||||| ||| || |||||||||||||||||||||    
T  7884234 ttttttaaggtaaaacagttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatatta 7884333  T
Q  289 atcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||    
T  7884334 atcttcctaactctcatccttctgtttt 7884361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 78 - 316
Target Start/End: Complemental strand, 12465298 - 12465072
Alignment:
Q  78 tgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaacc 176  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||||||       ||||||| ||||||||||||||  ||||||   |||||||||| |    
T  12465298 tgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgtgttacatgatgtttccggatta---aatccggaaa-c 12465203  T
Q  177 ccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttta 276  Q
    |||||||||||||||||  | |||||| ||||| || ||||||||||          ||||||||| |||||||| ||||||| ||| ||||| ||||||    
T  12465202 ccctaaacaccatttttttaggtaaaatagttctgagtatataatcc---------gagcacaaatcctaaacatatttgtaatatgtatagttatttta 12465112  T
Q  277 gggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||| ||||||| |||||| ||||||    
T  12465111 gggacaatattaatcttcataactcttatccttttgtttt 12465072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 319 - 429
Target Start/End: Original strand, 39525005 - 39525115
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||  || |||| ||| ||||||||||||||||| |||    
T  39525005 tccgaaatttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttcttgtgggactctgcccctcaaaatccaaaattccatc 39525104  T
Q  419 gtttagaccaa 429  Q
    |||||||||||    
T  39525105 gtttagaccaa 39525115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 6156960 - 6157068
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||| |||||||| ||||||||||||||||| |||    
T  6156960 tccgaaactttcccagaaaatcagaaaaaattcaaggaccatgactcccgtagtagggacttcttacgggactccgcccctcaaaatccaaaattccatc 6157059  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  6157060 gtttagacc 6157068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 13908600 - 13908716
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||| ||||||||||||| |||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  13908600 aaaacagttcggattatataatccgaattgtatcaacataaattttaaacatgtttgtaacacggatagtcattttatggacaatattaatcttcttaac 13908699  T
Q  300 tctcatccttctgtttt 316  Q
      |||||||||| ||||    
T  13908700 cttcatccttctctttt 13908716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 26318977 - 26319162
Alignment:
Q  9 ttttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaat-gagtaacggatttttccggat 106  Q
    ||||||||||||||| ||||  | |||| | |||| ||||| ||||||||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||    
T  26318977 ttttttccaaaaatgcccttgcggtttccggatttcataattcggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggat 26319076  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattttt 193  Q
    ||| | ||||||||||||       ||||| ||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||    
T  26319077 tttgttatccggaaactt-ccaaaatagggtgcgttacatgatgtttccggattacataatccgaaaaccccctaaacacccttttt 26319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 31929017 - 31928909
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||  |||||||||||||||  |||    
T  31929017 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaagggacttcttgcgggactccgcccttcaaaatccaaaatttcatc 31928918  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  31928917 gtttagacc 31928909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 38692675 - 38692567
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttag-aagggacttcttacggcactccgccgctcaaaatccaaaattcaat 417  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||| ||    
T  38692675 tccgaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccttaggaagggacttcttacgggactccgcccctcaaaatccaaaattctat 38692576  T
Q  418 cgtttagac 426  Q
    |||||||||    
T  38692575 cgtttagac 38692567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 39 - 312
Target Start/End: Original strand, 27212598 - 27212868
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| |||||||| | || ||||||| ||||||| ||| ||||||| ||||| |||| ||||| |||||||| ||||||| |||  |       |||||     
T  27212598 atttcataatccgaactgatgttttcctttgttatagggtgaaaaaatgagttacgggttttttcggattttgtaatccgaaaatctcaaaaaatagggt 27212697  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagc 236  Q
    |||||||||||| |||  ||||||||||| | | | || |||| |||||| ||||| || | |||| |||||| ||||||||||| | || | ||||||     
T  27212698 gcgttacatgattttttcggattacataaccagaacacaccctgaacaccctttttgaagggaaaaacagttcggattatataattcgaactatatcagt 27212797  T
Q  237 acaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctg 312  Q
    ||||||| |||||||||||||||||| |||||||||     | |||||||||||||||||||||||||||||||||    
T  27212798 acaaattataaacatgtttgtaacatagatagtcat-----gaacaatattaatcttcctaactctcatccttctg 27212868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 228 - 309
Target Start/End: Original strand, 14111947 - 14112028
Alignment:
Q  228 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 309  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14111947 tgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatcctt 14112028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 176 - 307
Target Start/End: Original strand, 21070394 - 21070525
Alignment:
Q  176 cccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttt 275  Q
    |||||||||| ||||||| ||   |||| | |||||||||||||||||||| || ||||| ||||||||| ||||| |||||||||| ||||||||||||    
T  21070394 cccctaaacatcattttttaagaaaaaataattcagattatataatccaaactgaatcagtacaaattctgaacatatttgtaacatagatagtcatttt 21070493  T
Q  276 agggacaatattaatcttcctaactctcatcc 307  Q
    | ||||||||||||||||| |||| |||||||    
T  21070494 aaggacaatattaatcttcataaccctcatcc 21070525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 8739049 - 8738947
Alignment:
Q  205 agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 304  Q
    ||||| ||||| |||||||||| || |||| ||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  8739049 agttcggattacataatccaaactgcatcaacaccaattctgaacatgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctca 8738950  T
Q  305 tcc 307  Q
    |||    
T  8738949 tcc 8738947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 319 - 429
Target Start/End: Original strand, 15957978 - 15958088
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||||| | ||||||||||| ||||||||| || ||| |||| ||||||||||||||||  |||    
T  15957978 tccgaaacttccccagaaaatcagaaaaaattcaaggaccataactcccttagaagcgacttcttatgggacttcgcctctcaaaatccaaaatttcatc 15958077  T
Q  419 gtttagaccaa 429  Q
    |||||||||||    
T  15958078 gtttagaccaa 15958088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 319 - 428
Target Start/End: Complemental strand, 31221231 - 31221122
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||| | || ||||||||||||||||||  |||||||| ||||||||||||||||  |||    
T  31221231 tccgaaacttccccagaaaatcagaaaaaattcaaggaccgtgacttccatagaagggacttcttacgagactccgcccctcaaaatccaaaatttcatc 31221132  T
Q  419 gtttagacca 428  Q
    ||||||||||    
T  31221131 gtttagacca 31221122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 330 - 427
Target Start/End: Complemental strand, 32841852 - 32841755
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||| |||||||||||||||| ||||| |||| |||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||    
T  32841852 cccagaaaatcagaaaaaattcaaggatcatgactcccctagaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacc 32841755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 8739239 - 8739139
Alignment:
Q  218 taatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    ||||||||| || | |||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  8739239 taatccaaactgcaccagcaccaattctgaacatgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcatccttgtgctttt 8739140  T
Q  318 g 318  Q
    |    
T  8739139 g 8739139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 12847495 - 12847611
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||| | ||| ||||||| || |||||||||||||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||| |||    
T  12847495 aaaacagttcggtttaaataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatattaatcttcccaac 12847594  T
Q  300 tctcatccttctgtttt 316  Q
    |||| |  |||||||||    
T  12847595 tctcgtatttctgtttt 12847611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 37183673 - 37183565
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    |||||||  |||||| ||||| |||||||||||||||||||||| |||| |||||||||| |||||||| |||||||| ||||||||||||||||| |||    
T  37183673 tccgaaacatccccataaaatcagaaaaaattcaaggaccatgactcccgtagaagggacatcttacgggactccgcccctcaaaatccaaaattccatc 37183574  T
Q  419 gtttagacc 427  Q
     ||||||||    
T  37183573 atttagacc 37183565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 156 - 310
Target Start/End: Original strand, 27158093 - 27158246
Alignment:
Q  156 ggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgttt 255  Q
    |||||| | |||||| | ||||| || |||||||||| |||   |||||||| | ||||||||||||  || |||||||||||||||| | |||||||||    
T  27158093 ggattatagaatccgaacaccccatagacaccattttacaagaaaaaacagt-cggattatataatctgaactgtatcagcacaaattatgaacatgttt 27158191  T
Q  256 gtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    | ||||||||||||||||||| |||||||||||| ||||||||  ||||||||||    
T  27158192 gaaacatggatagtcattttaaggacaatattaagcttcctaatcctcatccttc 27158246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 180 - 309
Target Start/End: Complemental strand, 40613765 - 40613635
Alignment:
Q  180 taaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagg 278  Q
    |||||||||||||| || | |||| |||||| ||||||||||||| || ||||| |||| ||||| | ||||||||||||||||||||| | |||||| |    
T  40613765 taaacaccattttttaagggaaaaacagttcggattatataatccgaactgtatgagcaaaaattatgaacatgtttgtaacatggataattattttaag 40613666  T
Q  279 gacaatattaatcttcctaactctcatcctt 309  Q
    |||| ||||||||||||||||| ||||||||    
T  40613665 gacattattaatcttcctaactttcatcctt 40613635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 33487840 - 33487948
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||  || || ||||| || |||||||||||||| |||    
T  33487840 tccgaaacttccccagaaaatcagaaaaaagtcaaggatcatgactcccttagaagggacttcttttgggaccccgcccctaaaaatccaaaattccatc 33487939  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  33487940 gtttagacc 33487948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 319 - 419
Target Start/End: Original strand, 38372530 - 38372630
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| |||||||||| || |||||||||||||||||||||| | ||||||||| |||||||||||| ||||| || ||||||||||||||||| |||    
T  38372530 tccgaaacttccccagaagatcagaaaaaattcaaggaccatgacttccttagaagagacttcttacgggactccacccctcaaaatccaaaattccatc 38372629  T
Q  419 g 419  Q
    |    
T  38372630 g 38372630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 26898695 - 26898588
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||| ||||| |||||||||||||||||||||| |||  ||||||||||||||||| | |||||||| ||||||||||||||||  |||    
T  26898695 tccgaaacttgcccaaaaaatcagaaaaaattcaaggaccatgactcctgtagaagggacttcttacaggactccgcccctcaaaatccaaaatttcatc 26898596  T
Q  419 gtttagac 426  Q
    ||||||||    
T  26898595 gtttagac 26898588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 220 - 318
Target Start/End: Complemental strand, 27494202 - 27494104
Alignment:
Q  220 atccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttg 318  Q
    ||||||| || | |||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| | | ||||| ||||||||    
T  27494202 atccaaactgcaccagcaccaattctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaacccccgtccttgtgtttttg 27494104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 16429338 - 16429451
Alignment:
Q  204 cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctc 303  Q
    |||||| |||||  ||||||||| |  |||||||| |||||| ||||||||||||||||| |||||| ||||| |||||||||||||||||| ||||||     
T  16429338 cagttcggattacctaatccaaactacatcagcaccaattctgaacatgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactctt 16429437  T
Q  304 atccttctgttttt 317  Q
    |||||| |||||||    
T  16429438 atccttgtgttttt 16429451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 6800996 - 6800880
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    ||||||||||| ||||||||||   || |||||||||| ||||| | |||||||||| |||||||| |||||||||| |||||||  |||||||||| |     
T  6800996 aaaacagttcaaattatataatttgaactgtatcagcataaattatgaacatgtttgcaacatggacagtcattttaaggacaatgctaatcttcctcat 6800897  T
Q  300 tctcatccttctgtttt 316  Q
    |||||||||||||||||    
T  6800896 tctcatccttctgtttt 6800880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 311
Target Start/End: Original strand, 23269386 - 23269500
Alignment:
Q  200 aaaacagttcagattatataatccaaattgt---atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcct 296  Q
    |||||||||||||||||||||||| || | |   |||| ||||| |||| ||||||||||||||||| | | |||||||| |||||||||||||||||||    
T  23269386 aaaacagttcagattatataatccgaactttatcatcatcacaacttctgaacatgtttgtaacatgaacaatcattttaaggacaatattaatcttcct 23269485  T
Q  297 aactctcatccttct 311  Q
    ||||||||| |||||    
T  23269486 aactctcattcttct 23269500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 34530300 - 34530384
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||||||    
T  34530300 cagcactaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttcctaactttcatcattgtgttttt 34530384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 289
Target Start/End: Complemental strand, 1350404 - 1350290
Alignment:
Q  176 cccctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattt 274  Q
    |||||||||| | |||||||| | |||| |||||| ||||||||||| |||| | ||||| ||||||||||||||||||||||||||||||||  |||||    
T  1350404 cccctaaacatcttttttcaagggaaaaacagttcggattatataattcaaactatatcaacacaaattctaaacatgtttgtaacatggataaccattt 1350305  T
Q  275 tagggacaatattaa 289  Q
    || ||| ||||||||    
T  1350304 tatggataatattaa 1350290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 8973631 - 8973561
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  8973631 aacatgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcatccttgtgttttt 8973561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 429
Target Start/End: Original strand, 15799454 - 15799564
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| | |||||||||||||||||||  |||| |||||||||||||  | || ||||| || ||||||||||||||||| |||    
T  15799454 tccgaaacttgcccagaaaatcaaaaaaaattcaaggaccatgcctcccctagaagggacttccaatgggactccacccctcaaaatccaaaattccatc 15799553  T
Q  419 gtttagaccaa 429  Q
    |||||||||||    
T  15799554 gtttagaccaa 15799564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 28445247 - 28445161
Alignment:
Q  231 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||| ||| |||||| ||||||||||||||||| || ||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  28445247 atcaacaccaattctgaacatgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcatccttgtgttttt 28445161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 193
Target Start/End: Complemental strand, 36359817 - 36359662
Alignment:
Q  39 attttataatccggaatgg-tgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| |||||| ||||||| ||||||||||||||||||| |||||||||||| ||||| |||| |||||||| |||||| ||||  |       |||| |    
T  36359817 atttcataatctggaatgggtgttttcttttgttaaagggtgaaaaatgagttacggaatttttcggattttgtaatccagaaatctcaaaaaataggac 36359718  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattttt 193  Q
    |||| ||||||| |||  ||||||||||||| | |||||||||||||||| |||||    
T  36359717 gcgtaacatgattttttcggattacataatctgaaaaccccctaaacacctttttt 36359662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 26190211 - 26190106
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||| ||||| | ||||||||||| |||||||| |||| ||||||| |||||||| || |||||||| ||||||||||||||||| || |||    
T  26190211 gaaacttccccaaaaaatcaaaaaaaattcaacgaccatgactcccctagaaggaacttcttaagggactccgcccctcaaaatccaaaattccattgtt 26190112  T
Q  422 tagacc 427  Q
    ||||||    
T  26190111 tagacc 26190106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 28445441 - 28445357
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||  || || |||||||| |||||||    
T  28445441 cagcacgaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatctttgtagctttcatccttgtgttttt 28445357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 40619877 - 40619769
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||| ||||||| | |||||||||||||| ||||| |||   |||||| ||||||||||| |||||||| ||||||||||||||||| |||    
T  40619877 tccgaaacttccctagaaaatcataaaaaattcaaggatcatgactccaaaagaaggaacttcttacgggactccgcccctcaaaatccaaaattccatc 40619778  T
Q  419 gtttagacc 427  Q
     ||||||||    
T  40619777 atttagacc 40619769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 20891842 - 20891948
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||  |||||||||||||||| ||||| |||| || |||||||||||||||| | |||| |  |||||||||||||||| |||    
T  20891842 tccgaaacttccccagaaaac-agaaaaaattcaaggatcatgactcccctacaagggacttcttacgggattccgtccttcaaaatccaaaattccatc 20891940  T
Q  419 gtttagac 426  Q
    ||||||||    
T  20891941 gtttagac 20891948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 7884422 - 7884531
Alignment:
Q  319 tccgaaatttcccc-agaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaat 417  Q
    ||||||| |||||| | ||||| |||||| ||||||||||||||| |||| |||||| |||||||||||| |||||||| ||||||||| ||||||  ||    
T  7884422 tccgaaacttcccctataaaatcagaaaacattcaaggaccatgactcccgtagaagagacttcttacggaactccgcccctcaaaatctaaaatttcat 7884521  T
Q  418 cgtttagacc 427  Q
     |||||||||    
T  7884522 tgtttagacc 7884531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 16429164 - 16429233
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 309  Q
    |||||||||||||||||||||||||||||||||||||  || |||| |||||||| ||||||||||||||    
T  16429164 aattctaaacatgtttgtaacatggatagtcattttaatgataatactaatcttcataactctcatcctt 16429233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 38641026 - 38641103
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||  | |||||||| |||||||    
T  38641026 aattctgaacatgtttgtaacatagatagtcattttaaggacaatattaatcttcctagttttcatccttgtgttttt 38641103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 424
Target Start/End: Original strand, 38871900 - 38872005
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| |||||||||||||||||| ||| ||||  ||||| |||||||||||| |||  ||| || |||||||||||||| |||    
T  38871900 tccgaaactttcccagaaaatcagaaaaaattcaaggaccgtgactcccaaagaagagacttcttacgggactttgccccttaaaatccaaaattctatc 38871999  T
Q  419 gtttag 424  Q
    ||||||    
T  38872000 gtttag 38872005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 327 - 427
Target Start/End: Original strand, 27212941 - 27213040
Alignment:
Q  327 ttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    ||||| ||||||| ||||||| ||||| | |||||| |||| ||||||||||||||||||| |||||||| ||||||||| ||||||| || ||||||||    
T  27212941 ttccctagaaaatcagaaaaa-ttcaacgtccatgactcccctagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagac 27213039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 28108276 - 28108354
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatga-aaaatgagtaacggatttttccggattttataatccggaaa 121  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| |||||||||||    
T  28108276 tataatccggaatgatgttttcttttgttaaagg-tgagaaaatgagtaacgggtttttccagattttgtaatccggaaa 28108354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 37095146 - 37095007
Alignment:
Q  37 gaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagg 135  Q
    |||||| ||||||||||||||||||| |||| |||| ||| ||||||||| ||| ||||||||||||||||||| ||||||| ||||||       || |    
T  37095146 gaatttcataatccggaatggtgtttccttt-gttatagggtgaaaaatggagttacggatttttccggattttgtaatccgaaaactt-aaaaaataag 37095049  T
Q  136 gcgcgttacatgatgtttatggattacataatccggaaaccc 177  Q
    ||||||||||||||||||  |||||||  |||||| ||||||    
T  37095048 gcgcgttacatgatgtttccggattaccaaatccgaaaaccc 37095007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 14111851 - 14111945
Alignment:
Q  102 cggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaa 196  Q
    |||||||| |||||| |||||||       |||||||||||||||||||||| |||||||||||||| | ||| |||||||||||| ||||||||    
T  14111851 cggattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttttggattacataatctgaaaatcccctaaacaccctttttcaa 14111945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 27493987 - 27493902
Alignment:
Q  231 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||  |||| || |||||||||||||||||||||||||||||   ||||||||||||||||||||  |||||||| ||||||    
T  27493987 atcagcatcaattatatacatgtttgtaacatggatagtcattttaaaaacaatattaatcttcctaacattcatccttgtgtttt 27493902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 12464986 - 12464902
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||||||||||||| |||  ||||||| ||||||||||| |||| ||| ||||||||||||||||| ||  ||||||||    
T  12464986 aaaaaattcaaggaccatgactcctatagaaggaacttcttacgggactctgcccctcaaaatccaaaattccattatttagacc 12464902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 18514854 - 18514970
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||||||||||||||||  ||  | |||| ||||||||||||  ||||||||||||| ||||  || |||  |||| |||| ||||||||||||    
T  18514854 aaaacagttcagattatataatctgaaccgcatcatcacaaattctaagtatgtttgtaacatagataaccagttttaggaccatatcaatcttcctaac 18514953  T
Q  300 tctcatccttctgtttt 316  Q
    || |||||||| |||||    
T  18514954 tcacatccttcagtttt 18514970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 41639562 - 41639446
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||  ||||||||||||| || |||||||||||||||||| |   |||||||||||| ||||  || ||||  |||||||||||| | ||||||    
T  41639562 aaaacagtttggattatataatccgaactgtatcagcacaaattctgagtctgtttgtaacatagataaccagtttaatgacaatattaatttccctaac 41639463  T
Q  300 tctcatccttctgtttt 316  Q
    ||||||| || ||||||    
T  41639462 tctcatctttttgtttt 41639446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 24203576 - 24203501
Alignment:
Q  319 tccgaaatttccccagaaaatta-gaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactcc 393  Q
    ||||||| ||||| ||||||| | ||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  24203576 tccgaaacttcccaagaaaatcatgaaaaaattcaaggaccatgactcccttagaagggacttcttatgggactcc 24203501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 28083262 - 28083160
Alignment:
Q  327 ttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaag--ggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttag 424  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||    | |||||| || |||  ||| ||||||||||||||||| |||||| ||    
T  28083262 ttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaagcaaaaattcttatgggactatgcccctcaaaatccaaaattccatcgttcag 28083163  T
Q  425 acc 427  Q
    |||    
T  28083162 acc 28083160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 34530117 - 34530202
Alignment:
Q  231 atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||||| |||| |  ||||||||||| | ||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||    
T  34530117 atcagcaccaattttggacatgtttgtagc-tggatagtcattttaaggacagtattaatcttcctaactttcatccttgtgttttt 34530202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 11186048 - 11185971
Alignment:
Q  350 tcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||| || || |||| | ||||||||||||||||  |||||||| |||||||| |||||||||||||||||||||    
T  11186048 tcaaggatcaggactcccgttgaagggacttcttacgatactccgcccctcaaaattcaaaattcaatcgtttagacc 11185971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 16429255 - 16429316
Alignment:
Q  366 ccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||  ||||||||||||    
T  16429255 ccttagaagggacttcttacgggactccgcccctcaaaattcaaaattttatcgtttagacc 16429316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 38640818 - 38640895
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||| || || || ||||| |||||||    
T  38640818 aattctgaacatgtttataacatggatagtcaatttaaggacaatattaatcttcatagctttcgtccttgtgttttt 38640895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 364 - 426
Target Start/End: Complemental strand, 28445345 - 28445284
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    ||||||||||||||||||||| |  |||||||| ||||||||||||||||| |||||||||||    
T  28445345 tcccttagaagggacttcttatgatactccgcc-ctcaaaatccaaaattccatcgtttagac 28445284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 38640578 - 38640766
Alignment:
Q  8 attttttccaaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatg---aaaaatgagtaacggatttttccg 103  Q
    ||||||||||| |||| |||| | ||||| | ||||||||||| |||||||||||||| ||||||||||| ||   |||||||||  || ||  ||| ||    
T  38640578 attttttccaataatgcccttgaagtttccggattttataatctggaatggtgttttcctttgttaaagggtgaaaaaaaatgagctacagagattttcg 38640677  T
Q  104 gattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattttt 193  Q
    |||||||||||| |||||  |       |||||||||||| ||||| | |  |||||||||||||| |||  |||||||||||| |||||    
T  38640678 gattttataatctggaaatctcaaaaaatagggcgcgttaaatgatttattcggattacataatcc-gaacacccctaaacacccttttt 38640766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 174 - 316
Target Start/End: Original strand, 41253326 - 41253468
Alignment:
Q  174 accccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcatt 273  Q
    |||||||||||||||||||| |    |||| | ||| ||||||||||| | || |||| |||||| |||| | ||| ||||||||||||| |||   | |    
T  41253326 accccctaaacaccatttttaaggaaaaaataattcggattatataattcgaactgtaccagcaccaattatgaacttgtttgtaacatgaataacgaat 41253425  T
Q  274 ttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||| | || |||||||||||||||||| ||||||| |||||||    
T  41253426 ttaagtaccatattaatcttcctaactatcatcctcctgtttt 41253468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 34440717 - 34440778
Alignment:
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattttt 193  Q
    |||| |||||||||||||||||  ||||| ||||||||| |||||||||||||||| |||||    
T  34440717 taggacgcgttacatgatgttttcggattgcataatccgaaaaccccctaaacacccttttt 34440778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 5456333 - 5456389
Alignment:
Q  367 cttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttta 423  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||  ||||||||    
T  5456333 cttagaagggatttcttacgggactccgcctctcaaaatccaaaatttcatcgttta 5456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 26093712 - 26093796
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| ||||||| ||  | |||| |||| |||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||    
T  26093712 aaaaaaatcaaggatcaaaactcccgtagaggggacttcttacgggactcctcccctcaaaatccaaaattccatcatttagacc 26093796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 4650194 - 4650253
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    ||||||||||| ||||||||||||||| || | |||||||||||||||||| || |||||    
T  4650194 aacatgtttgtcacatggatagtcattgtaagaacaatattaatcttcctatctttcatc 4650253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 43388006 - 43387944
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||| ||||||||||||| |||||| | ||||||||||||||||| ||| ||||||||    
T  43388006 tcccttagaaaggacttcttacgggactccgtc-ctcaaaatccaaaattccatcatttagacc 43387944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 414
Target Start/End: Complemental strand, 8739129 - 8739079
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattc 414  Q
    |||||||||||| |||| |||||| |||||||| |||||||||||||||||    
T  8739129 tcccttagaaggaacttattacgggactccgcccctcaaaatccaaaattc 8739079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 26898790 - 26898756
Alignment:
Q  282 aatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||    
T  26898790 aatattaatcttcctaactctcatccttctgtttt 26898756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 11186233 - 11186128
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    ||||||||||||| || |||||||||| ||||||| |   | |||||||||||||||  |  ||||  ||| |||||||| ||| | |||||||||||||    
T  11186233 gattatataatccgaactgtatcagcataaattctgagtctatttgtaacatggataaccgatttaatgaccatattaattttcttgactctcatccttc 11186134  T
Q  311 tgtttt 316  Q
    ||||||    
T  11186133 tgtttt 11186128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 43388094 - 43388018
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| ||||| ||| |||||||||||||  ||||| |||||||||||||||||||| || || ||||| |||||||    
T  43388094 aattctgaacatatttataacatggatagtt-ttttaaggacaatattaatcttcctagctttcgtccttgtgttttt 43388018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 43388298 - 43388217
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaag---gatgaaaaatgagtaacggatttttccggattttataatccggaaa 121  Q
    ||||||||| |||||||||||| ||||||||||   ||  |||||||||| ||||||| ||  ||||||| |||||||||||    
T  43388298 tataatccgaaatggtgttttcctttgttaaagtgtgaaaaaaaatgagttacggattcttttggattttgtaatccggaaa 43388217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 5535501 - 5535397
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    |||||||||||| |||| ||||||||||||||  | | | |||||| |||||| |||  || |||| |||| ||| ||||| ||||||| |||||||||     
T  5535501 gattatataatctaaatcgtatcagcacaaatattgagcgtgtttgaaacatgaataaccagtttaaggactatactaatcatcctaac-ctcatccttg 5535403  T
Q  311 tgtttt 316  Q
    ||||||    
T  5535402 tgtttt 5535397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 8032217 - 8032319
Alignment:
Q  94 gatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattttt 193  Q
    ||||||| |||||||| ||||| ||||| ||       |||||| | ||||||||| |||  ||||||||||||||| | ||| |||||||||| |||||    
T  8032217 gattttttcggattttgtaatctggaaatttcaaaaaatagggcacattacatgatttttccggattacataatccgaacacctcctaaacacccttttt 8032316  T
Q  194 caa 196  Q
    |||    
T  8032317 caa 8032319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 14001737 - 14001778
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    |||||||||||||||||||||||| || ||||| ||||||||    
T  14001737 aaaacagttcagattatataatccgaactgtattagcacaaa 14001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 4028047 - 4028003
Alignment:
Q  200 aaaacagttcagattatataa-tccaaattgtatcagcacaaatt 243  Q
    |||||||||| |||||||||| ||| |||||||||||||||||||    
T  4028047 aaaacagttcggattatataaatccgaattgtatcagcacaaatt 4028003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 8032330 - 8032366
Alignment:
Q  238 caaattctaaacatgtttgtaacatggatagtcattt 274  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  8032330 caaattttaaacatgtttataacatggatagtcattt 8032366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 27158385 - 27158421
Alignment:
Q  391 tccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  27158385 tccgcccctcaaaatccaaaattccatcgtttagacc 27158421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 43 - 315
Target Start/End: Complemental strand, 142189 - 141917
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgtt 142  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||| |||||| ||||||||||||||       |||||||||||    
T  142189 tataattcggaatgatgttttcttttgttaaagggtgaaaaatgtgtaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgtt 142090  T
Q  143 acatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaat 242  Q
    |||||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||  ||| |||||||||||||| || |||||||||||||||    
T  142089 acatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaattgttgagattatataatccgaactgtatcagcacaaat 141990  T
Q  243 tctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  141989 tctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttctgttt 141917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 141826 - 141778
Alignment:
Q  379 ttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| || |||| ||| ||||||||||||||||| ||||||||||||    
T  141826 ttcttatgggactctgcccctcaaaatccaaaattccatcgtttagacc 141778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 182; Significance: 4e-98; HSPs: 98)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 43 - 312
Target Start/End: Original strand, 35142009 - 35142276
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgtt 142  Q
    ||||||||||||||||||| |||||||||||||| |||||||  |||||||||||||||||| |||| ||||||||||||||       |||||||||||    
T  35142009 tataatccggaatggtgttatcttttgttaaagggtgaaaaa--agtaacggatttttccgggttttgtaatccggaaacttcaaaaattagggcgcgtt 35142106  T
Q  143 acatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaat 242  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||   ||||||||||||||||||    
T  35142107 acatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaacagttcggattatataatatgaattgtatcagcacaaat 35142206  T
Q  243 tctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctg 312  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  35142207 tctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatccttctg 35142276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 39 - 311
Target Start/End: Complemental strand, 51540847 - 51540572
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaa---tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagg 135  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||   ||||||||||||||||| |||||||  |||||||||||||       ||||    
T  51540847 attttataatccgaaatggtgttttcttttgttaaagggtgaaaaaaaatgagtaacggatttttctggattttggaatccggaaacttcaaaaaatagg 51540748  T
Q  136 gcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcag 235  Q
    ||||||||||||||||||  | ||||||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||||  ||| |||||||    
T  51540747 gcgcgttacatgatgtttccgaattacataatccggaaaccccttaaacaccgtttttcaaggtaaaacagttcggattatataatctgaatagtatcag 51540648  T
Q  236 cacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51540647 cacaaattctaaacatgtttgtaacttggatagtcattttagggacaatattaatcttcctaactctcatccttct 51540572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 38977975 - 38977701
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    ||||||| ||||||||||||| |||||||||||| ||||||| | |||||||||||||||  |||||| ||||||||||||||       ||||||||||    
T  38977975 tataatctggaatggtgttttattttgttaaagggtgaaaaaataagtaacggatttttctagattttgtaatccggaaacttcaaaaaatagggcgcgt 38977876  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    |||||| |||||  ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||||| || ||||||||||||||    
T  38977875 tacatggtgttttgggattacataatccgaaaaccccctaaacaccttttttcaaggtaaaacagttcaaattatataatccgaactgtatcagcacaaa 38977776  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38977775 ttataaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgtttt 38977701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 47740159 - 47739885
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||| ||| ||||||||| |||||| ||||||||||||||       ||||||||||    
T  47740159 tataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagcaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgt 47740060  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||  |||  ||||||||||||  || ||||||||||||||    
T  47740059 tacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaattgttttgattatataatctgaactgtatcagcacaaa 47739960  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  47739959 ttctaaacatgtttgtaacatagatagtcatttaagggacaatattaatcttcataactctcatccttctgtttt 47739885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 9 - 318
Target Start/End: Original strand, 50716150 - 50716460
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggatt 107  Q
    |||||| |||| ||| |||| |||||| |||||| ||||||||||||||| ||||| ||||||| ||| ||||||||| ||| |||| ||||| ||||||    
T  50716150 tttttttcaaagatgcccttgagtttccgaatttcataatccggaatggtattttcctttgttatagggtgaaaaatggagttacgggttttttcggatt 50716249  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || ||||||| ||||||       ||||||| ||||||||||||||   ||||||||||||||||||||||||||||||| |||||||| |||||||| |    
T  50716250 ttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaacaat 50716349  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 307  Q
    || ||||||||||||  || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  50716350 tcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatca 50716449  T
Q  308 ttctgtttttg 318  Q
    ||| |||||||    
T  50716450 ttccgtttttg 50716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 9 - 318
Target Start/End: Complemental strand, 50796697 - 50796387
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggatt 107  Q
    |||||| |||| ||| |||| |||||| |||||| ||||||||||||||| ||||| ||||||| ||| ||||||||| ||| |||| ||||| ||||||    
T  50796697 tttttttcaaagatgcccttgagtttccgaatttcataatccggaatggtattttcctttgttatagggtgaaaaatggagttacgggttttttcggatt 50796598  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || ||||||| ||||||       ||||||| ||||||||||||||   ||||||||||||||||||||||||||||||| |||||||| |||||||| |    
T  50796597 ttgtaatccgaaaacttcaaaaaatagggcgtgttacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaacaat 50796498  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 307  Q
    || ||||||||||||  || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  50796497 tcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatca 50796398  T
Q  308 ttctgtttttg 318  Q
    ||| |||||||    
T  50796397 ttccgtttttg 50796387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 3903037 - 3902763
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||||||||||| ||||||| ||| |||||| || ||| || | |||||||||||||| ||||||| ||||||       ||| ||    
T  3903037 atttcataatccggaatggtgttttcctttgttatagggtgaaaagtggagttactggtttttccggattttgtaatccgaaaacttcaaaaaatagagc 3902938  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| || ||||||||||    
T  3902937 gcgttacatgatgtttttggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagca 3902838  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctg 312  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||    
T  3902837 caaattctaaacatgtttgtaacatggatgatcattttatggacaatattaatcttcataactctcatccttctg 3902763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 39 - 316
Target Start/End: Complemental strand, 3352298 - 3352019
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttataatccggaaacttnnnnnnntaggg 136  Q
    ||||||||||||  |||| |||||| |||||||||||| |||||||  ||||||||| ||||||||  ||||| ||||| ||||||||       |||||    
T  3352298 attttataatccaaaatgatgtttttttttgttaaagggtgaaaaaaatgagtaacgaatttttccaaattttgtaatcaggaaacttaaaaaaataggg 3352199  T
Q  137 cgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagc 236  Q
     ||||||||||||||||  |||||||||||| ||||||||||||||||||| ||| |||| ||||||||||||  |||||||||||  || |||||||||    
T  3352198 tgcgttacatgatgtttccggattacataattcggaaaccccctaaacaccctttatcaaggtaaaacagttcgaattatataatctgaactgtatcagc 3352099  T
Q  237 acaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3352098 acaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcattcttctgtttt 3352019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 33 - 316
Target Start/End: Original strand, 39149732 - 39150015
Alignment:
Q  33 ttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnn 131  Q
    ||||| ||| |||||||  |||| |||||||||||||||||||| ||||||| | || |||||||||||||||||||| |||||| ||||||            
T  39149732 ttctggattatataatctagaattgtgttttcttttgttaaagggtgaaaaaattagcaacggatttttccggattttgtaatccagaaact-caaaaaa 39149830  T
Q  132 tagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgta 231  Q
    |||||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| || | ||    
T  39149831 tagggcgcgttacatagtgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagttcgggttatataatccgaactcta 39149930  T
Q  232 tcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||| |||||||||||||||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  39149931 tcagcacaaattttaaacatgtttgtaacattggtagtcattttagagacaatattaattttcctaactctcatccttctgtttt 39150015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 45 - 316
Target Start/End: Complemental strand, 46623010 - 46622748
Alignment:
Q  45 taatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataat-ccggaaacttnnnnnnntagggcgcgtt 142  Q
    ||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||  ||||||||||       |||| | ||||    
T  46623010 taatctggaatgatgttttcttttgttaaatgatgaaaaaatgagtaacggatttttccggattttataaaaccggaaacttcaaaaaataggacacgtt 46622911  T
Q  143 acatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaat 242  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  46622910 acatgatgtttccggattacataatctggaaaccccctaaacaccatttttcaaagtaaaacagttcggattatataatccgaactgtatcagcacaaat 46622811  T
Q  243 tctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||           ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  46622810 tctaaa-----------catggatagtcattttagggacaatattaatcttccttactctcattcttctgtttt 46622748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 16 - 316
Target Start/End: Original strand, 51258307 - 51258610
Alignment:
Q  16 caaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataat 114  Q
    ||||||||||||| | ||||||| |||| |||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  51258307 caaaaatgtccttgaagtttctggatttcataatccggaattgtgttttcctttgttaaagggtgaaaaatgagttacggatttttccggattttgtaat 51258406  T
Q  115 ccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa-cagttcagat 213  Q
    ||  ||| ||       ||||||||||||||| || |||  ||||||||||||||| | ||||||||||||||||||||||| | |||| || ||   ||    
T  51258407 ccataaatttcaaaaaatagggcgcgttacataattttttcggattacataatccgaacaccccctaaacaccatttttcaagggaaaaacaatttgaat 51258506  T
Q  214 tatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg-acaatattaatcttcctaactctcatccttctg 312  Q
    |||||||||| || |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||    
T  51258507 tatataatccgaactgtatcagcacaaattttaaacatgtttataacatggatagtcattttagggaacaatattaatcttcataactctcatccttttg 51258606  T
Q  313 tttt 316  Q
    ||||    
T  51258607 tttt 51258610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 98 - 316
Target Start/End: Complemental strand, 34821514 - 34821296
Alignment:
Q  98 tttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaa 197  Q
    |||||| ||||| ||||||||||||||       ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||     
T  34821514 tttccgaattttgtaatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttttcaag 34821415  T
Q  198 gtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttccta 297  Q
    |||||| ||||| ||||||||||||  || ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  34821414 gtaaaatagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttccta 34821315  T
Q  298 actctcatccttctgtttt 316  Q
    | | |||||||||||||||    
T  34821314 aatttcatccttctgtttt 34821296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 80 - 316
Target Start/End: Original strand, 33438492 - 33438727
Alignment:
Q  80 aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccc 179  Q
    |||||| ||||||||||||||| | ||||| ||||||  ||||||       |||||||||||||||||||||   ||||||||||||  |||||||| |    
T  33438492 aaaaataagtaacggatttttctgaattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgttcc-ggattacataatgtggaaaccctc 33438590  T
Q  180 taaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg 279  Q
     |||||||||||||||| |||||||||||| ||||||||||||  || |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33438591 aaaacaccatttttcaaggtaaaacagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttaggg 33438690  T
Q  280 acaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||    
T  33438691 acaatattaatcttcctaactctcatccttctgtttt 33438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 39 - 316
Target Start/End: Complemental strand, 501372 - 501094
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||| ||| ||||||||||||| ||||||| |||  |||||||| ||| | |  |||||||||||||| ||||||  ||||||       ||||||    
T  501372 atttcatattcctgaatggtgttttcctttgttatagggcgaaaaatggagttatgagtttttccggattttgtaatccaaaaacttcaaaaaatagggc 501273  T
Q  138 gcgttacatgatgtttatggattacataatccggaaa-ccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagc 236  Q
    ||||||||||||||||  ||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| |||    
T  501272 gcgttacatgatgtttccggattgcataatccggaaaaccccctaaacaccttttttcaaggtaaaacagttc-gattatataatccgaactgtataagc 501174  T
Q  237 acaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  501173 acaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaatcttcctagctctcatccttctgtttt 501094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 39 - 316
Target Start/End: Complemental strand, 2358854 - 2358575
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnn-taggg 136  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| ||||||||| | ||||||| ||||||||||||||        |||||    
T  2358854 atttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggattttcctggattttgtaatccggaaacttcaaaaaaataggg 2358755  T
Q  137 cgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagc 236  Q
    || ||||||||||||||  || ||||||||||||||||||| | ||||||| ||||| || |||||| ||||| ||||||||||||| || |||||||||    
T  2358754 cgtgttacatgatgtttccggcttacataatccggaaaccctccaaacacccttttttaaggtaaaatagttcggattatataatccgaactgtatcagc 2358655  T
Q  237 acaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    | |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  2358654 ataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgtttt 2358575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 18 - 310
Target Start/End: Original strand, 28872910 - 28873205
Alignment:
Q  18 aaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatga-gtaacggatttttccggattttataatcc 116  Q
    ||||||||||| |||||  | |||| |||||| |||||| ||||||  ||||||| ||| |||||||||| || |||  |||||| ||||||||||||||    
T  28872910 aaaatgtccttgagttttcggatttcataatctggaatgatgtttttctttgttatagggtgaaaaatgaagttacgagtttttctggattttataatcc 28873009  T
Q  117 ggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttc--aaagtaaaacagttcagatt 214  Q
    | ||| ||       |||| |||||||||| ||||||  ||||||||||||||   ||||||||||||||| |||||   || |||||||||||| ||||    
T  28873010 gaaaatttcaaaaaataggacgcgttacattatgtttccggattacataatccaacaaccccctaaacacccttttttttaaggtaaaacagttcggatt 28873109  T
Q  215 atataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  28873110 atataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttagggacaatattaatcttcttaactctcattcttc 28873205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 47301947 - 47302224
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||| ||||||||||||||| ||||||| ||| ||||||||| ||| | ||||||||||||||||| ||||||||||||||       || |||    
T  47301947 atttcataattcggaatggtgttttcctttgttatagggtgaaaaatggagttatggatttttccggattttgtaatccggaaacttaaaaaaataaggc 47302046  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaag-taaaacagttcagattatataatccaaattgtatcagc 236  Q
    ||||||||||||||||  ||||||||||||||| ||||| |||||||||| |||||  ||| ||||| ||||| ||||||||||||| || |||||||||    
T  47302047 gcgttacatgatgtttccggattacataatccgaaaacctcctaaacaccctttttttaaggtaaaatagttcggattatataatccgaactgtatcagc 47302146  T
Q  237 acaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||| |||||||| ||||||||||| |||| ||||||| ||||||||||||| || |||||||| |||||| ||||||    
T  47302147 acaaatcctaaacatatttgtaacatgtatagccatttta-ggacaatattaatatt-ctaactcttatccttttgtttt 47302224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 16 - 316
Target Start/End: Complemental strand, 49096481 - 49096179
Alignment:
Q  16 caaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataat 114  Q
    ||||||||||||| | ||||| |||||| |||||| |||||| ||||||  ||| ||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  49096481 caaaaatgtccttgaagtttccgaatttcataatctggaatgatgtttttctttattaaagggtgaaaaataagttacggatttttccggattttgtaat 49096382  T
Q  115 ccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagatt 214  Q
    |||||||  |       || |||  |||||||||| |||  | ||||||||||||  | |||||||||||| | |||||||| | |||||||||   |||    
T  49096381 ccggaaatctcaaaaaatatggcatgttacatgattttttcgaattacataatccaaacaccccctaaacagcctttttcaaggaaaaacagtttgaatt 49096282  T
Q  215 atataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg-acaatattaatcttcctaactctcatccttctgt 313  Q
    ||||||||  || |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  49096281 atataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagatagtcattttagggaacaatataaatcttcctaactctcatccttctgt 49096182  T
Q  314 ttt 316  Q
    |||    
T  49096181 ttt 49096179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 141 - 316
Target Start/End: Complemental strand, 43473097 - 43472922
Alignment:
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||| |||||  |||||||||||| || |||||||||||||    
T  43473097 ttacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaatagttcgaattatataatccgaactgtatcagcacaa 43472998  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    || |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  43472997 atcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatccttttgtttt 43472922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 141 - 316
Target Start/End: Original strand, 52777261 - 52777437
Alignment:
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccattttt-caaagtaaaacagttcagattatataatccaaattgtatcagcaca 239  Q
    |||||||||||||  ||||||||||||  |||||||||||||||||| ||||| ||| |||||||||||| |||||||||||   || ||||||||||||    
T  52777261 ttacatgatgtttccggattacataataaggaaaccccctaaacacccttttttcaaggtaaaacagttcggattatataatttgaactgtatcagcaca 52777360  T
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  52777361 aattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttcttaactcttatccttttgtttt 52777437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 294
Target Start/End: Original strand, 3937285 - 3937563
Alignment:
Q  9 ttttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaat-gagtaacggatttttccggat 106  Q
    |||||| |||||||| |||| || |||| | |||||||||||| ||||||||||||| ||||||| |||||||||||| |||| |||  |||||||| ||    
T  3937285 tttttttcaaaaatgcccttgaggtttccggattttataatccagaatggtgttttcctttgttataggatgaaaaatggagttacgagtttttccgaat 3937384  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    ||| ||||||||||||||       |||||||||||||||||||||| ||||||||||||| ||          ||||||| ||||| || |||||| ||    
T  3937385 tttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataattcg---------aaaacacccttttttaaggtaaaatag 3937475  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttc 294  Q
    ||| ||||||||||||| || ||||||||||||||| |||||||| ||||||||||| |||  ||||||| |||||||||||||||||    
T  3937476 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttatggacaatattaatcttc 3937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 141 - 316
Target Start/End: Complemental strand, 30721934 - 30721763
Alignment:
Q  141 ttacatgatgtttatggattacataatccggaaac-cccctaaacaccatttttcaaagtaaaac-agttcagattatataatccaaattgtatcagcac 238  Q
    ||||||||| |||  ||||||||||||||| | || ||||||||||||||||||||| | ||||  ||||||||||||||||||| || |||||||||||    
T  30721934 ttacatgattttttcggattacataatccgaacactcccctaaacaccatttttcaagggaaaaatagttcagattatataatccgaactgtatcagcac 30721835  T
Q  239 aaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||||||||||    
T  30721834 aaattctaaacatgtttgtaac------tctcattttagggacaatattaatcttcctaactcttatccttctgtttt 30721763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 228 - 316
Target Start/End: Original strand, 47123144 - 47123232
Alignment:
Q  228 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47123144 tgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctgtttt 47123232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 228 - 316
Target Start/End: Original strand, 47130510 - 47130598
Alignment:
Q  228 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47130510 tgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccttctgtttt 47130598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 28873273 - 28873379
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||||| |||||||| ||||||||||||||||| |||    
T  28873273 tccgaaacttccccagaaaattagaaaaaattcaaggaacatgactcccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccatc 28873372  T
Q  419 gtttaga 425  Q
    |||||||    
T  28873373 gtttaga 28873379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 174 - 316
Target Start/End: Complemental strand, 27143511 - 27143369
Alignment:
Q  174 accccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcatt 273  Q
    |||| ||||||||| |||||||| | ||||||||||| |||||||||||  |  |||||||||||||||||| ||||||||||||||||||||||| |||    
T  27143511 accctctaaacaccctttttcaaggaaaaacagttcaaattatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttatt 27143412  T
Q  274 ttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||| ||| ||||||||  ||||||||  |||||||||| ||||    
T  27143411 ttaaggataatattaagattcctaaccatcatccttctatttt 27143369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 34821232 - 34821127
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||||||||| |||||||||||||||||||||| || | ||||||||||||||||||| | |||||| ||||||||||||||||| ||||||    
T  34821232 gaaacttccccagaaaatcagaaaaaattcaaggaccatgactctcatagaagggacttcttacgggagtccgcccctcaaaatccaaaattccatcgtt 34821133  T
Q  422 tagacc 427  Q
    ||||||    
T  34821132 tagacc 34821127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 201 - 318
Target Start/End: Original strand, 51492890 - 51493007
Alignment:
Q  201 aaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaact 300  Q
    ||||||||| |||| |||||||| || ||||  |||||||||||||| ||||||||||| ||| ||||| |||||| |||||||||||||||||||||||    
T  51492890 aaacagttcggattttataatccgaactgtactagcacaaattctaatcatgtttgtaatatgaatagttattttatggacaatattaatcttcctaact 51492989  T
Q  301 ctcatccttctgtttttg 318  Q
    ||||||||| ||||||||    
T  51492990 ctcatccttatgtttttg 51493007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 5127968 - 5127852
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||||| ||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||| || |    
T  5127968 aaaacagttcagtttatataatctgaattgtatcagcataaattttaaacatgtttgtaacatggatatccattttatggacaatattaatcttcatagc 5127869  T
Q  300 tctcatccttctgtttt 316  Q
    |||||||| | ||||||    
T  5127868 tctcatccatttgtttt 5127852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 51258671 - 51258779
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| |||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||  |||    
T  51258671 tccgaaactttcccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatc 51258770  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  51258771 gtttagacc 51258779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 330 - 425
Target Start/End: Complemental strand, 3902687 - 3902592
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttaga 425  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  3902687 cccagaaaatcagaaaaaattcaaggaccatgacacccttagaaggaatttcttacgggactccgcccctcaaaatccaaaattcaatcgtttaga 3902592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 34821623 - 34821512
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||||||||||       ||||||||||    
T  34821623 tataatccggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacggaattttccggattttgtaatccggaaacttcaaaaaatagggcgcgt 34821524  T
Q  142 tacatgatgttt 153  Q
    ||| ||||||||    
T  34821523 tacctgatgttt 34821512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 48303919 - 48304074
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||||||||||| ||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||  |       |||||     
T  48303919 atttcataatccggaatggtgttttcctttgttaaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctcaaaaaatagggt 48304018  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattttt 193  Q
    | |||||||||| |||   |||||||||||||| ||||||||| ||||||||||||    
T  48304019 gtgttacatgattttttcagattacataatccgaaaaccccctcaacaccattttt 48304074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 330 - 427
Target Start/End: Original strand, 35142351 - 35142448
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||  ||||||| || |||||||||||||| ||||||||||||    
T  35142351 cccagaaaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcttacggggctccgcccctaaaaatccaaaattccatcgtttagacc 35142448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 206 - 304
Target Start/End: Complemental strand, 26053584 - 26053485
Alignment:
Q  206 gttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg-acaatattaatcttcctaactctca 304  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||||||||| |||||    
T  26053584 gttctgattatataatccaaactgtatcaacacaaattctaaacatgtttataacttggatagtcattttagggaacaatactaatcttcctaattctca 26053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 2358511 - 2358406
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||| ||||||||| ||||||| || |||    
T  2358511 gaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccctagaagggacttcttacgggactacgcccctcaaaatctaaaattccattgtt 2358412  T
Q  422 tagacc 427  Q
    ||||||    
T  2358411 tagacc 2358406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 33842139 - 33842026
Alignment:
Q  204 cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctc 303  Q
    |||||| ||||| |||||| |||||| |||  ||| |||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||| ||||||||    
T  33842139 cagttcggattacataatctaaattgcatcgacaccaattttaaacatgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctc 33842040  T
Q  304 atccttctgttttt 317  Q
    |||||| |||||||    
T  33842039 atccttgtgttttt 33842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 50716520 - 50716628
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||| |||  |||||| |||||||||||| | |||||| ||||||||||||||||| |||    
T  50716520 tccgaaacttccccagaaaatcagaaaaaactcaaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattccatc 50716619  T
Q  419 gtttagacc 427  Q
     ||||||||    
T  50716620 ctttagacc 50716628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 50796327 - 50796219
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||| |||  |||||| |||||||||||| | |||||| ||||||||||||||||| |||    
T  50796327 tccgaaacttccccagaaaatcagaaaaaactcaaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattccatc 50796228  T
Q  419 gtttagacc 427  Q
     ||||||||    
T  50796227 ctttagacc 50796219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 3351958 - 3351852
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||| ||||||| |||||||||||| |||| |||| |||| |||||||||||||||| || |||||||| ||||||||| ||||||| |||    
T  3351958 tccgaaacttccctagaaaatcagaaaaaattcagggacaatgactcccgtagaagggacttcttatgggactccgcccctcaaaatctaaaattccatc 3351859  T
Q  419 gtttaga 425  Q
    |||||||    
T  3351858 gtttaga 3351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 29035888 - 29036005
Alignment:
Q  200 aaaacagttcagattatataatccaaattgt-atcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaa 298  Q
    ||||||||||  |||||||||||  || ||| |||| |||||||||||| ||||||||||||||||||| |||||||| |||| |||||| |||||||||    
T  29035888 aaaacagttcgaattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcctaa 29035987  T
Q  299 ctctcatccttctgtttt 316  Q
    |||||||| || ||||||    
T  29035988 ctctcatcattatgtttt 29036005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 39150076 - 39150177
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||      ||| ||||||||||||||||| |||    
T  39150076 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgacttccttagaagggacttcttacgg------gcc-ctcaaaatccaaaattccatc 39150168  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  39150169 gtttagacc 39150177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 326 - 427
Target Start/End: Original strand, 47302293 - 47302394
Alignment:
Q  326 tttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttaga 425  Q
    |||||| | ||||| |||||||||||||||| ||||| |||| ||||||||||||||||||| |||| ||| ||||||||||||||||| || |||||||    
T  47302293 tttcccaaaaaaatcagaaaaaattcaaggatcatgactcccatagaagggacttcttacgggactctgcccctcaaaatccaaaattccattgtttaga 47302392  T
Q  426 cc 427  Q
    ||    
T  47302393 cc 47302394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 47980063 - 47979970
Alignment:
Q  212 attatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 305  Q
    |||||||||||| || |||||||||||||||| | ||||| ||| |||||| ||||||||||||| |||||||||||||||| |||||||||||    
T  47980063 attatataatccgaactgtatcagcacaaattttgaacatatttataacatagatagtcattttaaggacaatattaatctttctaactctcat 47979970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 4394246 - 4394354
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| | |||||| ||||||||||||| |||| ||||||| |||| |||||| | |||||| ||||||||||||||||| |||    
T  4394246 tccgaaactttcccagaaaatcaaaaaaaaatcaaggaccatgactcccgtagaaggaactttttacgggattccgcccctcaaaatccaaaattccatc 4394345  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  4394346 gtttagacc 4394354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 45712153 - 45712053
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||| ||||||||||||  || |||||||||||||||| | | ||||||||||||||||||| ||||||||  ||| |||||||||||||||||    
T  45712153 aaaacagttcggattatataatctgaactgtatcagcacaaattatgatcatgtttgtaacatggataatcattttaaagaccatattaatcttcctaac 45712054  T
Q  300 t 300  Q
    |    
T  45712053 t 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 51540519 - 51540411
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||| |||||  ||||||||||||||||||||| ||||||||||||||||||| | || | || ||| |||||||||||||| || |||    
T  51540519 tccgaaacttccccaaaaaatccgaaaaaattcaaggaccatgactcccttagaagggacttctcatgggattctgcccctcaaaatccaaaactccatc 51540420  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  51540419 gtttagacc 51540411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 327 - 422
Target Start/End: Complemental strand, 38977632 - 38977537
Alignment:
Q  327 ttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttt 422  Q
    ||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||  || |||||||| ||||||||||||||||  |||||||    
T  38977632 ttccccagaaaataagaaaaaattcaaggaccgtgactcccgtagaagggacttcttgtgggactccgcccctcaaaatccaaaatttcatcgttt 38977537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 335 - 414
Target Start/End: Complemental strand, 43472844 - 43472765
Alignment:
Q  335 aaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattc 414  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||||||| |||||||| |||||||||||||||||    
T  43472844 aaaatcagaaaaaattcaaggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaattc 43472765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 46624855 - 46624926
Alignment:
Q  245 taaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||| |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  46624855 taaatatgtttgtaacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctgtttt 46624926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 35345931 - 35345861
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||| |||||||    
T  35345931 aacatgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatccttttgttttt 35345861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 501033 - 500968
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagaccaa 429  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  501033 tcccatagaagggacttcttacggcactccgcccctcaaaatccaaaattccatcgtttagaccaa 500968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 8735530 - 8735599
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  8735530 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatccttgtgtttt 8735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 9087771 - 9087840
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  9087771 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatccttgtgtttt 9087840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 156 - 316
Target Start/End: Original strand, 29048388 - 29048548
Alignment:
Q  156 ggattacataatccggaaaccccctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtt 254  Q
    |||||| | |||||| | |||||||||||| | |||||||| | |||| || ||||||||||||||||  || | ||||| |||||||||| || |||||    
T  29048388 ggattatagaatccgaacaccccctaaacatcctttttcaagggaaaaacaattcagattatataatcggaactatatcaacacaaattctgaatatgtt 29048487  T
Q  255 tgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||| || ||| |||||| ||| ||||||||||||| ||||||| |||||| ||||||    
T  29048488 tgtaacat-gacagttattttaaggataatattaatcttcataactcttatccttatgtttt 29048548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 46622687 - 46622579
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| |||||||||||||||||||| | |||| |||||   | ||||||||| |||||||| |||| |||||||||||| |||    
T  46622687 tccgaaactttcccagaaaatcagaaaaaattcaaggaccatcactcccatagaatcaatttcttacgggactccgcccctcagaatccaaaattccatc 46622588  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  46622587 gtttagacc 46622579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 47123038 - 47123120
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaa-atgagtaacggatttttccggattttataatccggaaactt 124  Q
    ||||||| |||||| ||||||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||||||||||||    
T  47123038 tataatctggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaactt 47123120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 47130404 - 47130486
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaa-atgagtaacggatttttccggattttataatccggaaactt 124  Q
    ||||||| |||||| ||||||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||||||||||||    
T  47130404 tataatctggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaactt 47130486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 316
Target Start/End: Original strand, 47769363 - 47769468
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    ||||||| ||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||| | |  |||||||||||  ||||| ||||| |||    
T  47769363 gattatagaatctgaattgtatcagcgcaaattctgaacatgtttgtaacatggatagtcattttaagaatcatattaatctttttaactatcatcattc 47769462  T
Q  311 tgtttt 316  Q
    | ||||    
T  47769463 tatttt 47769468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 8735309 - 8735393
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||| |  |||||||| |||||||    
T  8735309 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatattcctagcattcatccttgtgttttt 8735393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 9087550 - 9087634
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||| |  |||||||| |||||||    
T  9087550 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatattcctagcattcatccttgtgttttt 9087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 29035804 - 29035880
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttta 276  Q
    |||||||||| ||||||||||| | |||||||| |  ||||||||| ||||||||||||||||||||||||||||||    
T  29035804 aaaacagttcggattatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcatttta 29035880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 45244514 - 45244577
Alignment:
Q  234 agcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttccta 297  Q
    ||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  45244514 agcaccaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttccta 45244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 414
Target Start/End: Complemental strand, 47739817 - 47739730
Alignment:
Q  327 ttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattc 414  Q
    |||||||||||||||||||||||||||| ||| ||| |||| |||||| ||||||||  || |||||||| |||||||| ||||||||    
T  47739817 ttccccagaaaattagaaaaaattcaagaaccgtgactcccatagaagagacttctttggggactccgcccctcaaaattcaaaattc 47739730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 46555433 - 46555546
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    ||||||||||||||   ||||||  |||||||| |||||||||| | |  |||||| |||||| ||||  ||||||| |||| |||||||||||| ||||    
T  46555433 aaaacagttcagat---ataatctgaattgtataagcacaaattttgagtatgtttataacatagataaccattttaaggaccatattaatcttcataac 46555529  T
Q  300 tctcatccttctgtttt 316  Q
    |||||||||||||||||    
T  46555530 tctcatccttctgtttt 46555546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 322 - 427
Target Start/End: Original strand, 3938452 - 3938557
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||| ||||| |||||||||||||||||||||| ||||||| |||| |||||||||   |||||||| |||||||||  |||||  || |||    
T  3938452 gaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccttataaggaacttcttacaagactccgcccctcaaaatcttaaatttcattgtt 3938551  T
Q  422 tagacc 427  Q
    ||||||    
T  3938552 tagacc 3938557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 14828977 - 14828872
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    ||||||||||||| || | ||| | | ||||||||||| |||||| ||||||||||| | |||||| ||| ||||||||||||| |||| ||||||| ||    
T  14828977 gattatataatccgaaatatattaacgcaaattctaaatatgtttataacatggataataattttaaggataatattaatcttcataaccctcatccatc 14828878  T
Q  311 tgtttt 316  Q
    ||||||    
T  14828877 tgtttt 14828872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 33700658 - 33700730
Alignment:
Q  13 ttccaaaaatgtccttta-gtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa 84  Q
    |||||||||||||||| | ||||||| |||| ||||||||||||||||||||| ||||||||||| |||||||    
T  33700658 ttccaaaaatgtccttgaagtttctggatttcataatccggaatggtgttttcctttgttaaagggtgaaaaa 33700730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 35345801 - 35345697
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||| ||| ||||| | || || || | |||||||||||||| |||| |||||||| ||||||||||||||||| | |    
T  35345801 tccgaaacttccccagaaaatcagaagaaaatcaagtatcaagactctcgtagaagggacttctaacgggactccgcccctcaaaatccaaaattccacc 35345702  T
Q  419 gttta 423  Q
    |||||    
T  35345701 gttta 35345697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 168
Target Start/End: Original strand, 45244322 - 45244447
Alignment:
Q  44 ataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgtt 142  Q
    |||||||||||| |||||||| ||||||||| |||| |||||||||| | ||||||||||||||||| |||| || |||  |       |||||||||||    
T  45244322 ataatccggaattgtgttttcctttgttaaaagatgaaaaaatgagttatggatttttccggattttgtaattcgaaaatctcaaaaaatagggcgcgtt 45244421  T
Q  143 acatgatgtttatggattacataatc 168  Q
    ||||||| |||  |||||||||||||    
T  45244422 acatgattttttcggattacataatc 45244447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 306
Target Start/End: Complemental strand, 54229996 - 54229860
Alignment:
Q  171 gaaaccccctaaacaccatttttcaaagt-aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagt 269  Q
    |||| ||| |||||||| ||||||| ||  |||||||||| ||||||||||| |||| ||||||| |||||||||| |   ||||||||||||| |||      
T  54229996 gaaaacccttaaacaccctttttcagaggcaaaacagttcggattatataattcaaactgtatcaacacaaattctgagtctgtttgtaacatgaatatc 54229897  T
Q  270 cattttagggacaatattaatcttcctaactctcatc 306  Q
    || |||| |||| |||||||||||||| |||| ||||    
T  54229896 cagtttaaggaccatattaatcttccttactcgcatc 54229860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 344 - 427
Target Start/End: Original strand, 29048622 - 29048705
Alignment:
Q  344 aaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||| ||||||| || || |||| ||||| |||||| |||||| |||||||| ||||||||||||||||| ||||||||||||    
T  29048622 aaaaaatcaaggatcaagactcccgtagaaaggacttattacgggactccgcccctcaaaatccaaaattccatcgtttagacc 29048705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 42936588 - 42936683
Alignment:
Q  30 agtttctgaattttataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataatccggaaactt 124  Q
    |||||| | |||| ||||||||||||||||||||| ||||||||||| || ||||| |||| |||||||||||| |||| || ||||| |||||||    
T  42936588 agtttccggatttcataatccggaatggtgttttcctttgttaaagggtgaaaaaaggagttacggatttttccagattataaaatccagaaactt 42936683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 512315 - 512214
Alignment:
Q  202 aacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 301  Q
    |||| ||| |||||||| |||  ||||||||||  ||||||| | ||||||||| ||||||||||||||||||||  ||| |||||||| ||| ||||||    
T  512315 aacaattcggattatatcatctgaattgtatcaatacaaattatgaacatgtttataacatggatagtcattttaaagaccatattaatattcataactc 512216  T
Q  302 tc 303  Q
    ||    
T  512215 tc 512214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 43420188 - 43420110
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaa 289  Q
    ||||||||||||  |||||||||| |||||||| | |||| |||||||||||||||| |||||||| | || |||||||    
T  43420188 gattatataatcagaattgtatcaacacaaattatgaacacgtttgtaacatggataatcattttaagaaccatattaa 43420110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 51816481 - 51816587
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||||||||||| ||||| |||||||| ||||||| ||  |  ||| ||||| ||||||||||||| |||| ||| |||||||| |||| ||  |||    
T  51816481 tccgaaatttccccaaaaaataagaaaaaaatcaaggatcaaaacacccctagaatggacttcttacgggactctgcccctcaaaattcaaattttcatc 51816580  T
Q  419 gtttaga 425  Q
    |||||||    
T  51816581 gtttaga 51816587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 427
Target Start/End: Original strand, 33439494 - 33439562
Alignment:
Q  359 atgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||| |||| || ||||||||| |||||| |||||||| | ||||||||||||||| ||||||||||||    
T  33439494 atgactcccataaaagggacttgttacggaactccgccccacaaaatccaaaattccatcgtttagacc 33439562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 34010158 - 34010042
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||| ||| ||||||||||||| |||||||||| || ||||| | |   ||||||||||||||||||  | |||| |||  |||||||| || |||||    
T  34010158 aaaacaattcggattatataatccgaattgtatcaacataaattttgagtctgtttgtaacatggatagctagtttaaggatcatattaatttttctaac 34010059  T
Q  300 tctcatccttctgtttt 316  Q
    ||| |||||| ||||||    
T  34010058 tcttatccttttgtttt 34010042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 40062469 - 40062585
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||| ||||| ||||||||||||| || | |||||||||||||| | |   |||||||||||||||||   | ||||  ||| |||||||||||||||||    
T  40062469 aaaatagttcggattatataatccgaactatatcagcacaaattttgagtttgtttgtaacatggataactagtttaaagaccatattaatcttcctaac 40062568  T
Q  300 tctcatccttctgtttt 316  Q
    |||  ||||| ||||||    
T  40062569 tctggtccttttgtttt 40062585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 41300901 - 41300985
Alignment:
Q  343 aaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| ||||||||||| | ||||  |||||  ||||||||||| ||||||||  |||||||| ||||||| ||||||||||||    
T  41300901 aaaaaaatcaaggaccattactcccgcagaagaaacttcttacgggactccgcccatcaaaatcaaaaattccatcgtttagacc 41300985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 43473211 - 43473148
Alignment:
Q  9 ttttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgtt 71  Q
    |||||| ||||||||||||| || |||| |||||| ||||||||||||||||||||| ||||||    
T  43473211 tttttttcaaaaatgtccttgaggtttccgaatttcataatccggaatggtgttttcctttgtt 43473148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 45244609 - 45244671
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||| ||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||    
T  45244609 tcccttagaaaggacttcttacgagactccgcc-ctcaaaatccaaaattccatcatttagacc 45244671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 14828758 - 14828700
Alignment:
Q  369 tagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| |||||||||| | ||||||||  |||||||||||||||| ||||||||||||    
T  14828758 tagaagagacttcttacaggactccgcctttcaaaatccaaaattccatcgtttagacc 14828700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 233 - 294
Target Start/End: Original strand, 32025111 - 32025172
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttc 294  Q
    |||||| |||||| ||||||||||||| ||  |||||| ||||| |||||||||||||||||    
T  32025111 cagcaccaattctgaacatgtttgtaatataaatagtcgttttaaggacaatattaatcttc 32025172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 52777501 - 52777562
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttctt 383  Q
    |||| ||||||| ||||| ||||||||||||||||| |||  ||||||| ||||||||||||    
T  52777501 gaaacttccccaaaaaatcagaaaaaattcaaggactatgtctcccttaaaagggacttctt 52777562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 33701541 - 33701459
Alignment:
Q  45 taatccggaatggtgttttcttttgttaaaggatgaaaaa---tgagtaacggatttttccggattttataatccggaaactt 124  Q
    |||||| ||||||||||||| ||||||||| | |||||||   ||||| ||| |||||||||||||   ||||||||||||||    
T  33701541 taatccagaatggtgttttcctttgttaaaaggtgaaaaaaaatgagttacgaatttttccggattacgtaatccggaaactt 33701459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 427
Target Start/End: Original strand, 40062647 - 40062755
Alignment:
Q  320 ccgaaatttccccagaaaattagaaaaaat-tcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    |||||||||||| ||||||| || |||||  ||||||| || || || | ||||||||||||||||||| |||  | | ||||||||| ||||||| |||    
T  40062647 ccgaaatttccctagaaaatcaggaaaaacatcaaggatcaagactctcgtagaagggacttcttacggtactttgtctctcaaaatctaaaattccatc 40062746  T
Q  419 gtttagacc 427  Q
     ||||||||    
T  40062747 atttagacc 40062755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 50384545 - 50384429
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||| ||||||||||||||| | || |||||| ||| ||||| | |   ||||||||||||  ||| ||| |||| |||  |||||||||||  ||||    
T  50384545 aaaacatttcagattatataatacgaactgtatctgcataaattatgagtttgtttgtaacatacataatcagtttaaggaacatattaatctttataac 50384446  T
Q  300 tctcatccttctgtttt 316  Q
    ||| |||||||||||||    
T  50384445 tctaatccttctgtttt 50384429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 8735069 - 8735144
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa 84  Q
    |||||||| |||||| | || |||||  | |||| ||||| ||||||||||||||| ||||||||||| |||||||    
T  8735069 ttttttcccaaaatgcctttgagttttcggatttcataattcggaatggtgttttcctttgttaaagggtgaaaaa 8735144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 9087310 - 9087385
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa 84  Q
    |||||||| |||||| | || |||||  | |||| ||||| ||||||||||||||| ||||||||||| |||||||    
T  9087310 ttttttcccaaaatgcctttgagttttcggatttcataattcggaatggtgttttcctttgttaaagggtgaaaaa 9087385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 410
Target Start/End: Complemental strand, 45711929 - 45711886
Alignment:
Q  367 cttagaagggacttcttacggcactccgccgctcaaaatccaaa 410  Q
    ||||||||||||||||||||| ||||| || |||||||||||||    
T  45711929 cttagaagggacttcttacgggactccacccctcaaaatccaaa 45711886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 52777169 - 52777216
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg 86  Q
    |||| |||||| |||||||||||||| ||||||| |||||||||||||    
T  52777169 atttcataatctggaatggtgttttcctttgttataggatgaaaaatg 52777216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 4300301 - 4300240
Alignment:
Q  250 atgtttgtaacat--ggatagtcattttagggacaatattaatcttcctaactctcatcctt 309  Q
    |||||||||||||  |||||  || |||| ||||||||||||||||||||||| ||||||||    
T  4300301 atgtttgtaacatatggataaccagtttaaggacaatattaatcttcctaactatcatcctt 4300240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 4394166 - 4394224
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaa-cggatttt 99  Q
    ||||||| |||||| ||||||||||||||||||| || |||||||||||| ||||||||    
T  4394166 tataatctggaatgatgttttcttttgttaaagggtgaaaaaatgagtaatcggatttt 4394224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 423
Target Start/End: Complemental strand, 34009936 - 34009882
Alignment:
Q  369 tagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttta 423  Q
    ||||||||||||||||||  |||||||| | ||||||||||||||| ||| ||||    
T  34009936 tagaagggacttcttacgtgactccgccccccaaaatccaaaattccatcattta 34009882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 45244729 - 45244782
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctt 293  Q
    |||||| ||||||||| |||||| |||||||||| || |||| |||||||||||    
T  45244729 aattctgaacatgtttataacattgatagtcattataaggacgatattaatctt 45244782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 429
Target Start/End: Complemental strand, 43471524 - 43471464
Alignment:
Q  369 tagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagaccaa 429  Q
    ||||||| |||||||||   ||||| || ||||||||||||||||  ||||||||||||||    
T  43471524 tagaaggaacttcttacaagactccacccctcaaaatccaaaatttcatcgtttagaccaa 43471464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 48549469 - 48549429
Alignment:
Q  205 agttcagattatataatccaaattgtatcagcacaaattct 245  Q
    |||||| |||||| |||| ||||||||||||||||||||||    
T  48549469 agttcatattataaaatctaaattgtatcagcacaaattct 48549429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 9e-96; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 32817838 - 32817564
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||| |||||| ||||||||||||||       |||||||| |    
T  32817838 tataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccagattttgtaatccggaaacttcaaaaaatagggcgcat 32817739  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||   |||||||||||||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||| || ||||||||||||||    
T  32817738 tacatgatgtttccagattacataatccgaaaaccccctaaacaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaa 32817639  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32817638 tcctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttctgtttt 32817564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 37 - 311
Target Start/End: Complemental strand, 40650909 - 40650633
Alignment:
Q  37 gaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttataatccggaaacttnnnnnnntag 134  Q
    ||||| |||||||||||||||||||||||||||||||||  |||||||  |||||||||||||||| |||| ||| ||||||||||||||       |||    
T  40650909 gaattatataatccggaatggtgttttcttttgttaaagcgtgaaaaaaatgagtaacggattttttcggaatttgtaatccggaaacttcaaaaaatag 40650810  T
Q  135 ggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatca 234  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||  || |||||||    
T  40650809 ggcgtgttacatgatgtttctggattacataatccggaaaccccttaaacaccatttttcaaggtaaaacagttcggattatatgatctgaactgtatca 40650710  T
Q  235 gcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40650709 gcacaaattataaccatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttct 40650633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 43 - 316
Target Start/End: Original strand, 42545900 - 42546173
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgtt 142  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||       |||| ||||||    
T  42545900 tataatccggaatggtgttatcttttgttaaagggtgaaaaatgaataacggatttttccggattttgtaatccggaaacttcaaaaaataggacgcgtt 42545999  T
Q  143 acatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaat 242  Q
    |||||||||||  |||| |||| ||||| ||||||||||| |||| |||||||| |||||||||||| ||||||||||||| || |||||||||||||||    
T  42546000 acatgatgtttccggataacatgatccgaaaaccccctaagcaccctttttcaaggtaaaacagttcggattatataatccgaactgtatcagcacaaat 42546099  T
Q  243 tctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||||    
T  42546100 tctaaacatgtttgtaacatggatagtcattttagagataatattaatcattctaactctcatccttctgtttt 42546173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 9 - 318
Target Start/End: Original strand, 17000277 - 17000586
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggatt 107  Q
    ||||||||||||||| |||| |||||  | |||| ||||||| ||||||||||||| ||||||| ||| ||||||||| ||| |||| ||||||||||||    
T  17000277 ttttttccaaaaatgcccttgagttttcggatttcataatccagaatggtgttttcctttgttatagggtgaaaaatggagttacgg-tttttccggatt 17000375  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagt 207  Q
    || |||| ||||||| |       |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17000376 ttgtaattcggaaacatcaaataatagggcacgttagatgatgtttctggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacagt 17000475  T
Q  208 tcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 307  Q
    |   |||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17000476 ttgaattatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcc 17000575  T
Q  308 ttctgtttttg 318  Q
    ||| |||||||    
T  17000576 ttccgtttttg 17000586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 316
Target Start/End: Complemental strand, 15070075 - 15069794
Alignment:
Q  37 gaattttataatccggaatggtgttttcttttgttaaaggatgaa-aaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagg 135  Q
    ||||| ||||||||| |||| |||||||||||||||||||  ||| ||||||||||||||| ||| |||||||| ||||||||||||||       ||||    
T  15070075 gaattatataatccgaaatgatgttttcttttgttaaagggagaacaaatgagtaacggatattttcggattttgtaatccggaaacttcaaaaaatagg 15069976  T
Q  136 gcgcgttacatgatgtttatggattacataatccggaaaccccc-taaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatca 234  Q
     || ||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| || |||||||    
T  15069975 acgtgttacatgatgtttccggattatataatccggaaacccccctaaacaccatttttcaagataaaacagttcagattatataatccgaactgtatca 15069876  T
Q  235 gcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  15069875 gcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttactaactttcatccttctgtttt 15069794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 9 - 318
Target Start/End: Complemental strand, 34162983 - 34162673
Alignment:
Q  9 ttttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaat-gagtaac-ggatttttccggat 106  Q
    ||||||||||||||  |||| |||||| | |||| ||||||||||||||||||||| ||||||| ||| |||||||| ||||  | || |||||||||||    
T  34162983 ttttttccaaaaatacccttgagtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttgcgggttttttccggat 34162884  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    ||| ||||||||||||||       ||||||| |||| |||||||||  |||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  34162883 tttgtaatccggaaacttcaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggt-aaacag 34162785  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    |||  |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  34162784 ttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagccattttagggacaatattaatcttcctaactcctatc 34162685  T
Q  307 cttctgtttttg 318  Q
    |||| |||||||    
T  34162684 cttccgtttttg 34162673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 39 - 316
Target Start/End: Complemental strand, 41584901 - 41584618
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatga-gtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| |||||| |||||||||||||||||||||| ||| |||||||||| || |||| |||||| ||||||| ||||||||||| ||       ||||||    
T  41584901 atttcataatcaggaatggtgttttcttttgttatagggtgaaaaatgaagttacgggtttttctggattttgtaatccggaaatttcaaaaactagggc 41584802  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaa-----attgtat 232  Q
      ||||||||||||||  |||||||||||||||||||||||||||||| | |||||||| ||||| |||||| |||||||||||||||     | |||||    
T  41584801 atgttacatgatgttttcggattacataatccggaaaccccctaaacatcctttttcaaggtaaatcagttcggattatataatccaatccgaactgtat 41584702  T
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41584701 cagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgtttt 41584618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 43 - 316
Target Start/End: Original strand, 7011141 - 7011416
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttcc-ggattttataatccggaaacttnnnnnnnta-gggcgcg 140  Q
    |||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||        | |||||||    
T  7011141 tataattcggaaaggtgttttctattgttaaagggtgaaaaatgagtaacggattttttctggattttgtaatccggaaacttcaaaaaaaaagggcgcg 7011240  T
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
    |||||||||||||  | || |  ||||||| |||||||||||||| |||||||||| |||||| ||||| ||||||||||||| || |||||||||| ||    
T  7011241 ttacatgatgtttccgaatcatgtaatccgaaaaccccctaaacatcatttttcaaggtaaaatagttcggattatataatccgaactgtatcagcaaaa 7011340  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7011341 attctaaacatgtttctaacatggatagtcattttagggacaatattaatcttcttaactctcatccttctgtttt 7011416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 39 - 316
Target Start/End: Complemental strand, 18583775 - 18583497
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatga-gtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||||||||||||||||||| ||||||| ||| |||||||||| || ||||| ||||||||||||| ||||| ||||||||       ||||||    
T  18583775 atttcataatccggaatggtgttttcctttgttatagggtgaaaaatgaagttacggacttttccggattttgtaatctggaaacttaaaaaaatagggc 18583676  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||| || |||||| ||||| ||||||||||||  || |||||| |||    
T  18583675 gcgttacatgatgttttcggattacataatccggaaaccccctaaacacctttttttaaggtaaaatagttcggattatataatctgaactgtatcggca 18583576  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  18583575 caaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctgcctaactcttatccttttgtttt 18583497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 43 - 316
Target Start/End: Original strand, 49677425 - 49677689
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||           ||||| ||||||||       ||||||||||    
T  49677425 tataatccggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacgaattttg----------taatctggaaacttcaaaaaatagggcgcgt 49677514  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||  ||||||| |||||||||||| ||||||||||||| || |||||||||| |||    
T  49677515 tacatgatgtttccggattacataatccagaaaccccctaaacaccccttttcaaggtaaaacagttcggattatataatccgaactgtatcagcataaa 49677614  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  49677615 ttctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaactctcattcttatgtttt 49677689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 47 - 316
Target Start/End: Original strand, 23442674 - 23442944
Alignment:
Q  47 atccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttaca 145  Q
    |||||||||| ||||||| ||||||| | | ||||||||| ||| ||||||||||||||||||||||||| ||||||||       ||||||||||||||    
T  23442674 atccggaatgatgttttcctttgttataaggtgaaaaatggagttacggatttttccggattttataatctggaaacttcaaaaaatagggcgcgttaca 23442773  T
Q  146 tgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattct 245  Q
    ||||||||  |||||| ||||| ||||||||||| ||||| | ||||| || |||||| ||||| |||||||||||||||| ||||||||||||||| ||    
T  23442774 tgatgtttccggattatataattcggaaaccccccaaacatctttttttaaggtaaaatagttcggattatataatccaaactgtatcagcacaaatcct 23442873  T
Q  246 aaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||| ||||||||||| | || ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  23442874 aaacatatttgtaacatgtacagccattttagggacaatattaatcttcctaactcttatccttttgtttt 23442944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 67 - 316
Target Start/End: Complemental strand, 44573299 - 44573050
Alignment:
Q  67 ttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacata 165  Q
    |||||||||| ||||||| |||||||| ||||||| |||||||| ||||||||||||||       ||||||||||||||||||||||  ||||||||||    
T  44573299 ttgttaaagggtgaaaaaatgagtaacagattttttcggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacata 44573200  T
Q  166 atccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatgga 265  Q
    ||||||||| ||| ||||| || |||||||| |||||| ||||| ||||||||||||  || ||||| |||||||||| ||||||||||||||||||| |    
T  44573199 atccggaaatcccttaaactccttttttcaaggtaaaatagttcggattatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaa 44573101  T
Q  266 tagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44573100 tagtcattttagggacaatattaatctttctaactctcatccttctgtttt 44573050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 33611672 - 33611363
Alignment:
Q  9 ttttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggat 106  Q
    |||||| |||||||| |||| || |||||| |||| ||||||| ||||||||||||  ||||||| ||| ||||||||| ||| |||||||||| |||||    
T  33611672 tttttttcaaaaatgcccttgaggtttctggatttcataatccagaatggtgtttttctttgttatagggtgaaaaatggagttacggattttttcggat 33611573  T
Q  107 tttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacag 206  Q
    ||| ||||  ||||||||       ||||||||||||||||||||||  ||||||||||||| |||||||||||||||||| ||||| || |||||| ||    
T  33611572 tttgtaatttggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccccctaaacacccttttttaaggtaaaatag 33611473  T
Q  207 ttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatc 306  Q
    ||| ||||||||||||| || ||||||||||||||| |||||||| ||||||||||| |||| ||||||| |||||||||| |||||||||| ||| |||    
T  33611472 ttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatatttatcttcctaaatcttatc 33611373  T
Q  307 cttctgtttt 316  Q
    ||| ||||||    
T  33611372 cttttgtttt 33611363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 80 - 316
Target Start/End: Complemental strand, 45047039 - 45046803
Alignment:
Q  80 aaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccc 179  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||        ||||| | |||||||||||||  | ||||||||||||||||||||||    
T  45047039 aaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaagagggc-cattacatgatgtttccgaattacataatccggaaaccccc 45046941  T
Q  180 taaacaccat-ttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagg 278  Q
    ||||||||   ||||||| |||||| ||||| |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  45046940 taaacacccccttttcaatgtaaaatagttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagg 45046841  T
Q  279 gacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45046840 gacaatattaatcttcctaactctcatccttctgtttt 45046803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 40908165 - 40907891
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||  | |||||  |||||||||||||       | ||||    
T  40908165 attttataatccgaaatggtgttttcttttgttaaagggtgaaaaaatgagtaacggattttttagaattttgcaatccggaaacttcaaaaaattgggc 40908066  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaag-taaaacagttcagattatataatccaaattgtatcagc 236  Q
    | | ||||||||||||  ||||||||||||||| |||||||||||||||| |||||  ||| ||||||||||| ||||||||| ||  || |||||||||    
T  40908065 gtgctacatgatgttttcggattacataatccgaaaaccccctaaacaccctttttttaaggtaaaacagttcggattatata-tctgaactgtatcagc 40907967  T
Q  237 acaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctg 312  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |||||    
T  40907966 acaaattctaaacatgtttgtaacatggataatcattttagagacaatattaatcttcctaactcccatctttctg 40907891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 39 - 316
Target Start/End: Original strand, 49786197 - 49786474
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaatg-agtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| |||||| ||||| |||||||| ||| ||| ||| ||||||||| ||| | |||||||||||||||||  |||||| ||||||       |||| |    
T  49786197 atttcataatctggaattgtgttttcctttattatagggtgaaaaatggagttatggatttttccggattttgcaatccgaaaactttaaaaaataggac 49786296  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||||| ||||| ||  ||||| ||||| ||||||||||||| || ||||||||||    
T  49786297 gcgttacatgatgtttccggattacataatccggaaaccccc-aaacacccttttttaagataaaatagttcggattatataatcctaactgtatcagca 49786395  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||| |||||| | ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  49786396 caaatcctaaacttatttgtaacatgtatagccattttatggacaatattaatcttcctaactcttatccttttgtttt 49786474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 43 - 316
Target Start/End: Complemental strand, 45568104 - 45567843
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa--tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcg 140  Q
    |||||||||||||| | ||||||||||||||||| |||||||  |||||||||| |||||||| ||||| |||| |||||||||       |||||||||    
T  45568104 tataatccggaatgatattttcttttgttaaagggtgaaaaaaatgagtaacgggtttttccgaattttgtaattcggaaacttcaaaaaatagggcgcg 45568005  T
Q  141 ttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaa 240  Q
     |||||||| ||| |||||||||| ||||| |||||||||||||||| ||||| || ||||||||              |||| || |||||||||||||    
T  45568004 ctacatgatatttttggattacatgatccgaaaaccccctaaacaccctttttaaaggtaaaaca--------------atccgaactgtatcagcacaa 45567919  T
Q  241 attctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||    
T  45567918 attctaaacatgtttgtaatatggatagtcattttagggacaatattaatctttctaactctcatccatttgtttt 45567843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 97 - 316
Target Start/End: Original strand, 34006246 - 34006467
Alignment:
Q  97 ttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaa 196  Q
    ||||||||||||| ||||||||||| ||       ||||||| | |||||||| |||  ||||||||||||  | | ||||| |||||||| ||||||||    
T  34006246 ttttccggattttttaatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacaccctttttcaa 34006345  T
Q  197 agtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggg-acaatattaatcttc 294  Q
     | |||| ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  34006346 gggaaaaacagttcagattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatcttc 34006445  T
Q  295 ctaactctcatccttctgtttt 316  Q
    ||||||||||||||||| ||||    
T  34006446 ctaactctcatccttctatttt 34006467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 93 - 316
Target Start/End: Complemental strand, 28866806 - 28866583
Alignment:
Q  93 ggatttttccggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttt 192  Q
    ||||||||||||||||| |||||||||| ||        ||||||||| |||||||| |||  ||||||||||||| | | |||| ||||||||| ||||    
T  28866806 ggatttttccggattttgtaatccggaa-ctataaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacaccctttt 28866708  T
Q  193 tcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatc 291  Q
    | || | |||| |||||| ||||||||||||  || |||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| | ||||||    
T  28866707 taaagggaaaaacagttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaatc 28866608  T
Q  292 ttcctaactctcatccttctgtttt 316  Q
    ||| |||||||||||||||||||||    
T  28866607 ttcataactctcatccttctgtttt 28866583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 182 - 316
Target Start/End: Complemental strand, 52744930 - 52744796
Alignment:
Q  182 aacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggac 281  Q
    |||||| |||||||| |||||||| ||| ||||| ||||||  || ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  52744930 aacaccttttttcaaggtaaaacaattcggattaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaac 52744831  T
Q  282 aatattaatcttcctaactctcatccttctgtttt 316  Q
    || ||||||||||||||||||||||||||||||||    
T  52744830 aacattaatcttcctaactctcatccttctgtttt 52744796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 43 - 316
Target Start/End: Original strand, 38885171 - 38885419
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgt 141  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||           | ||||        |||||| ||    
T  38885171 tataatccggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacagatttttccggatt-----------acacttaaaaaaagagggcgtgt 38885259  T
Q  142 tacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||  | ||||||||||||||||||||| |||||||| |||||||| |||||||| ||| ||||||||||||| || ||||||||||||||    
T  38885260 tacatgatgtttcag-attacataatccggaaaccccttaaacaccctttttcaaggtaaaacatttcggattatataatccgaactgtatcagcacaaa 38885358  T
Q  242 ttctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||              ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  38885359 ttctaaacatgt--------------gtcattttaaggacaatattaattttcctaactctcatccttctgtttt 38885419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 102 - 280
Target Start/End: Original strand, 32542388 - 32542563
Alignment:
Q  102 cggattttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaa 201  Q
    |||||||| |||||||||| |||       ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||   || ||||    
T  32542388 cggattttgtaatccggaatcttcaaaaaatagggtgcgttacatgatgtttacggattacataatccagaaaccccctaaacacccttt---aaggtaa 32542484  T
Q  202 aacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggga 280  Q
    || ||||| ||||||||||||| || ||||||||||||||| |||||||| ||||||||||| ||||||||| ||||||    
T  32542485 aatagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattctaggga 32542563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 42546235 - 42546342
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||| |||    
T  42546235 tccgaaacttccccagaaaatcagaaaaaatttaaggaccatgactcccttagaaggaacttcttacgggactccgcc-ctcaaaatccaaaattccatc 42546333  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  42546334 gtttagacc 42546342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 200 - 318
Target Start/End: Complemental strand, 24472896 - 24472778
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||| ||| ||||||||||||| || | ||| |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||    
T  24472896 aaaacaattcggattatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaaaatattaagcttcctaac 24472797  T
Q  300 tctcatccttctgtttttg 318  Q
    | |||| ||||||||||||    
T  24472796 tatcattcttctgtttttg 24472778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 28866522 - 28866414
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||| |||||||| ||||||||||||||||  |||    
T  28866522 tccgaaacttccccaaaaaattagaaaaaattcaaggaccgtgactcccttagaaggcacttcctacgggactccgcccctcaaaatccaaaatttcatc 28866423  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  28866422 gtttagacc 28866414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 43319436 - 43319279
Alignment:
Q  30 agtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnn 128  Q
    |||||||| ||||||||||| ||||  |||||||| ||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||||||  |        
T  43319436 agtttctggattttataatctggaacagtgttttcctttgttaaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctaaaa 43319337  T
Q  129 nnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacac 186  Q
       || ||||||||||||||| |||  ||||||||||||||| |||||||||||||||    
T  43319336 aaatatggcgcgttacatgattttttcggattacataatccgaaaaccccctaaacac 43319279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 178 - 316
Target Start/End: Complemental strand, 3561427 - 3561288
Alignment:
Q  178 cctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttta 276  Q
    |||||||||| |||||||| | |||| | ||||  |||||||||||| || |||||||||||||||| | |||||||||||||||| |||||| ||||||    
T  3561427 cctaaacaccctttttcaagggaaaaacggttcgaattatataatccgaactgtatcagcacaaattatgaacatgtttgtaacatagatagtaatttta 3561328  T
Q  277 gggacaatattaatcttcctaactctcatccttctgtttt 316  Q
     ||||| |||||||||| |||||||||||| |||||||||    
T  3561327 aggacagtattaatctttctaactctcatcattctgtttt 3561288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 45046742 - 45046636
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| |  |||||||| ||||||||||||||||| |||    
T  45046742 tccgaaacttgcccaaaaaatcagaaaaaattcaaggaccatgactcccttagaagggacttcttatgagactccgcccctcaaaatccaaaattccatc 45046643  T
Q  419 gtttaga 425  Q
    |||||||    
T  45046642 gtttaga 45046636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 39 - 285
Target Start/End: Complemental strand, 6223969 - 6223730
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaacttnnnnnnn-taggg 136  Q
    |||| |||||||| | | |||||||| ||||||| ||| ||||||| ||||| |||||||||| || |||||  |||||| ||||||        ||| |    
T  6223969 atttcataatccgaactcgtgttttcctttgttatagggtgaaaaaatgagttacggattttttcgaatttttcaatccgaaaacttcaaaaaaatagag 6223870  T
Q  137 cgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagt-aaaacagttcagattatataatccaaattgtatcag 235  Q
    ||| ||||||||| ||| |||||||||||||||| | ||||| |||||| | |||||||| || |||||||||| |||||||||||||||              
T  6223869 cgcattacatgatttttttggattacataatccgaacaccccataaacatcctttttcaaggtaaaaacagttcggattatataatccaa---------- 6223780  T
Q  236 cacaaattctaaacatgtttgtaacatggatagtcattttagggacaata 285  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6223779 cacaaattttaaatatgtttgtaacatggatagtcattttagggacaata 6223730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 183 - 316
Target Start/End: Original strand, 27794904 - 27795036
Alignment:
Q  183 acaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggaca 282  Q
    ||||| |||||||| | |||| |||||  |||||||||||  || ||||||||| |||||| ||||||||||| |||||| ||||||||||||| |||||    
T  27794904 acaccctttttcaaggaaaaatagttcgaattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggaca 27795003  T
Q  283 atattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||| |||| ||||||||||    
T  27795004 atattaatcttcctaactatcat-cttctgtttt 27795036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 316
Target Start/End: Complemental strand, 26723596 - 26723441
Alignment:
Q  162 cataatccggaaaccccctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaac 260  Q
    ||||||||| | |||||||||||||| ||||| || | |||| | |||| ||||||||||||| || | ||||||||||||||  |||||||||||||||    
T  26723596 cataatccgaacaccccctaaacacccttttttaagggaaaaacggttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaac 26723497  T
Q  261 atggatagtcattttaggg-acaatattaatcttcctaactctcatccttctgtttt 316  Q
    || |||||||||||||||| ||||||||||||||||| ||||| ||| |||| ||||    
T  26723496 at-gatagtcattttagggaacaatattaatcttccttactctgatcattctatttt 26723441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 40907826 - 40907718
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||| || | || ||||||||||||| || |||||||| ||||||||||||||||| |||    
T  40907826 tccgaaacttccccagaaaatcagaaaaaattcaaggatcatgactctcataaaagggacttcttatgggactccgcccctcaaaatccaaaattccatc 40907727  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  40907726 gtttagacc 40907718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 41584557 - 41584449
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||| |||| ||||||| ||     
T  41584557 tccgaaacttgcccagaaaatcagaaaaaattcaaggaccatgactcccatagaagggacttcttacgggactccgcccctcacaatctaaaattccatt 41584458  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  41584457 gtttagacc 41584449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 319 - 413
Target Start/End: Original strand, 34006528 - 34006622
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaatt 413  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||||||||| |||||| | ||||||||||||||||    
T  34006528 tccgaaacttccccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacgggactccgtccctcaaaatccaaaatt 34006622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 44572992 - 44572885
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||| |||| |||||| ||||||||| || ||||||||  ||||||| |||||||| |||    
T  44572992 tccgaaacttccccataaaatcagaaaaaattcaaggaccatgactcccatagaagagacttcttaggggactccgcccatcaaaattcaaaattctatc 44572893  T
Q  419 gtttagac 426  Q
    ||||||||    
T  44572892 gtttagac 44572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 18583433 - 18583328
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||| ||||| |||| |||||||||||||| || |||| |||||| |||||||||||| |||||||| ||||||||||||||||| || |||    
T  18583433 gaaacttccccaaaaaatcagaacaaattcaaggaccacgactcccatagaagagacttcttacgggactccgcccctcaaaatccaaaattccattgtt 18583334  T
Q  422 tagacc 427  Q
    ||||||    
T  18583333 tagacc 18583328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 9445922 - 9445838
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||||||||| |||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||    
T  9445922 cagcaccaattctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcatccttgtgttttt 9445838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 43319016 - 43318932
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||| |||||||| |||||||    
T  43319016 cagcaccaattctgaacatgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcatccttgtgttttt 43318932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 52744735 - 52744627
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| || | |||||||||||||||||   ||||| || |||||||| |||||||  |||    
T  52744735 tccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactctcatagaagggacttcttacaagactccacctctcaaaattcaaaatttcatc 52744636  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  52744635 gtttagacc 52744627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 800621 - 800544
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    ||||| ||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||    
T  800621 aattcaaaacatgtttgtagcatggatagtcatttttaggacaatattaattttcctaactctcatccttgtgttttt 800544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 174 - 305
Target Start/End: Complemental strand, 8704614 - 8704482
Alignment:
Q  174 accccctaaacaccatttttcaaagtaaaac-agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcat 272  Q
    |||||||||||||||| |||||| | ||||  ||||||||||||||||||| || ||||||| ||| | |||| |||||| || || |||||||||||||    
T  8704614 accccctaaacaccatatttcaagggaaaaatagttcagattatataatccgaactgtatcaccaccagttctgaacatgattatatcatggatagtcat 8704515  T
Q  273 tttagggacaatattaatcttcctaactctcat 305  Q
    |||| |||   ||||||||||||||||| ||||    
T  8704514 tttaaggatcttattaatcttcctaactatcat 8704482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 24472719 - 24472612
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||||||||||| ||||||||| |||||| || || |||| ||||||||||||||| ||| ||||||||  |||||||||||||||  |||    
T  24472719 tccgaaacttccccagaaaatcagaaaaaat-caaggatcaagactcccatagaagggacttcttgcgggactccgcccttcaaaatccaaaatttcatc 24472621  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  24472620 gtttagacc 24472612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 27795097 - 27795205
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| |||| |||||||| |||||||||||||||| ||||| ||   |||||| |||||||||| | |||||||| ||||||||||||||||  |||    
T  27795097 tccgaaacttccacagaaaatcagaaaaaattcaaggatcatgactcttgtagaagagacttcttacaggactccgcccctcaaaatccaaaatttcatc 27795196  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  27795197 gtttagacc 27795205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 322 - 414
Target Start/End: Original strand, 49786538 - 49786630
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattc 414  Q
    |||| ||||||| ||||| |||||||||||||||||||||| |||| |||||| ||||||||| |  |||||||| |||||||||||||||||    
T  49786538 gaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccgtagaagagacttcttatgagactccgcccctcaaaatccaaaattc 49786630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 330 - 425
Target Start/End: Complemental strand, 6223632 - 6223539
Alignment:
Q  330 cccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttaga 425  Q
    |||||||||| ||||||| |||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||||| ||||||||||    
T  6223632 cccagaaaatcagaaaaa-ttcaaggatcatgactcccttagaagagacttcttacgg-acaccgcccctcaaaatccaaaattccatcgtttaga 6223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 890579 - 890704
Alignment:
Q  176 cccctaaacaccatttttcaaagtaaaa-cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattt 274  Q
    ||||||| |||| |||||||  | |||| |||||| |||||||| |||| || ||||||||||||||||||||   |||||||||||||||||  || ||    
T  890579 cccctaatcaccttttttcagtggaaaagcagttcggattatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtt 890678  T
Q  275 tagggacaatattaatcttcctaact 300  Q
    || ||||||||||||||||| |||||    
T  890679 taaggacaatattaatcttcataact 890704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 9446160 - 9446055
Alignment:
Q  204 cagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctc 303  Q
    |||||| |||||  |||||| ||  ||| |||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| || || ||    
T  9446160 cagttcggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatcttcttagctttc 9446061  T
Q  304 atcctt 309  Q
    ||||||    
T  9446060 atcctt 9446055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 30829695 - 30829542
Alignment:
Q  30 agtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataatccggaaacttnnnnn 129  Q
    |||||| | |||| ||||||||||||||||||||| ||||||| ||| ||||||||||           || |||||||| ||||||||||||||         
T  30829695 agtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatgaag---------ttacggattttgtaatccggaaacttcaaaa 30829605  T
Q  130 nntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccattttt 193  Q
      ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||    
T  30829604 a-tagggcgcgttacatgatgttttcggattacataatccgaaaaccccctaaacacccttttt 30829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 38950178 - 38950345
Alignment:
Q  9 ttttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggatt 107  Q
    |||||| |||||||||| || || |||| | |||||||||| ||||||||| ||||| ||||||||| | |||||||||||| |||||||||||| ||||    
T  38950178 ttttttacaaaaatgtctttgaggtttccggattttataattcggaatggtattttcctttgttaaaag-tgaaaaatgagttacggatttttccagatt 38950276  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacac 186  Q
    || ||||||  |||          |||||||||||||||||| |||   |||||||||||||| |||| ||||||||||    
T  38950277 ttgtaatccaaaaa----------tagggcgcgttacatgattttttcagattacataatccgaaaactccctaaacac 38950345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 316
Target Start/End: Complemental strand, 25563436 - 25563367
Alignment:
Q  247 aacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    ||||||||||||| |||||||||||||||| |||||||||||| |||| |||| ||||||||| ||||||    
T  25563436 aacatgtttgtaatatggatagtcattttaaggacaatattaagcttcataaccctcatccttttgtttt 25563367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 33611299 - 33611194
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||| ||||| ||||||||||| |||||| ||| | || || |||||||||||||||| ||| || | ||||||||||||||||| || |||    
T  33611299 gaaacttccccaaaaaatcagaaaaaattcgaggaccgtgacttccataaaagggacttcttacgggactacgtccctcaaaatccaaaattccattgtt 33611200  T
Q  422 tagacc 427  Q
    ||||||    
T  33611199 tagacc 33611194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 43319220 - 43319143
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||| || || |||||||| |||||||    
T  43319220 aattctgaacatgtttgtaacattgatagtcattttaaggataatattaatcttcatagctttcatccttgtgttttt 43319143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 800739 - 800676
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacca 428  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||||||||    
T  800739 tcccttagaagggacttcttacgggactctgcc-ctcaaaatccaaaattccatcgtttagacca 800676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 8364143 - 8364214
Alignment:
Q  245 taaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    ||||||||||||||||||||||||||||||||   | |||||||||| ||||||||||||||||| |||||||    
T  8364143 taaacatgtttgtaacatggatagtcattttaaaaataatattaatc-tcctaactctcatccttgtgttttt 8364214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 38885480 - 38885588
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| || |||| ||||| | |||||||||||| ||||| | || | | |||||||||||||| || |||||||| |||||||| |||||||| |||    
T  38885480 tccgaaactttcccaaaaaataaaaaaaaattcaagcaccataactctcctggaagggacttcttatgggactccgcccctcaaaattcaaaattccatc 38885579  T
Q  419 gtttagacc 427  Q
    |||||||||    
T  38885580 gtttagacc 38885588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 24471566 - 24471390
Alignment:
Q  9 ttttttccaaaaatgtcctttag-tttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggatt 107  Q
    |||||||||||||||||||| || |||| | |||| ||||||||||||||||||||| ||||||| ||| || |||||       |||   || ||||||    
T  24471566 ttttttccaaaaatgtccttgaggtttccggatttcataatccggaatggtgttttcctttgttatagggtgcaaaat-------gga--gttacggatt 24471476  T
Q  108 ttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaa-ccccctaaacaccattttt 193  Q
    || |||||| |||||||       ||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||| |||||    
T  24471475 ttgtaatccagaaactt-caaaaatagggcgcgttacatgatgtttccggattacataatccgaaaacccccctaaacacccttttt 24471390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 6100035 - 6099960
Alignment:
Q  203 acagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaac--atggatagtcatttta 276  Q
    |||||||| ||||||||||||||||||||||| |||||||| |||| ||| |||||||  |||||| |||||||||    
T  6100035 acagttcaaattatataatccaaattgtatcaacacaaattttaaatatgcttgtaacatatggatggtcatttta 6099960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 211 - 311
Target Start/End: Original strand, 26230152 - 26230252
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 310  Q
    |||||||||| || || ||||||| ||||| |||||| | || ||||||||||||||| || |||| |||  |||||||||||| || ||||||||||||    
T  26230152 gattatataacccgaactgtatcaacacaagttctaatcttgcttgtaacatggatagccaatttaaggatcatattaatcttcatagctctcatccttc 26230251  T
Q  311 t 311  Q
    |    
T  26230252 t 26230252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 374
Target Start/End: Original strand, 7011477 - 7011532
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaag 374  Q
    |||||||  |||||||||||| |||||||||||||||||||||| |||||||||||    
T  7011477 tccgaaacatccccagaaaatcagaaaaaattcaaggaccatgactcccttagaag 7011532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 9446035 - 9445973
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||||||||  ||||||||||||    
T  9446035 tcccttagaagggatttcttacgggactccgcc-ctcaaaatccaaaatttcatcgtttagacc 9445973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 26723380 - 26723317
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttct 382  Q
    ||||||| ||||||||||||| ||||||||||||||||  |||| ||||||| |||||||||||    
T  26723380 tccgaaacttccccagaaaatcagaaaaaattcaaggattatgactcccttataagggacttct 26723317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 41584423 - 41584365
Alignment:
Q  369 tagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||| || |||||||||    
T  41584423 tagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagacc 41584365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 49677783 - 49677837
Alignment:
Q  372 aagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    |||||||||||||||| |||||||| |||||||| |||||||| |||||||||||    
T  49677783 aagggacttcttacgggactccgcccctcaaaattcaaaattccatcgtttagac 49677837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 800834 - 800781
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatat 286  Q
    |||||| |||||| ||||||||| |||||||||||||||||||| |||||||||    
T  800834 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatat 800781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 23443008 - 23443109
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtt 421  Q
    |||| ||||||| ||||| |||||||||||||||||||| | |||| |||||| |||||||| |   |||| ||  ||||||||||||||||| || |||    
T  23443008 gaaacttccccaaaaaatcagaaaaaattcaaggaccataactcccatagaagagacttcttgcacgactctgctcctcaaaatccaaaattctattgtt 23443107  T
Q  422 ta 423  Q
    ||    
T  23443108 ta 23443109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 316
Target Start/End: Original strand, 42928974 - 42929090
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    ||||| |||| |||||||||||||  | |||||||| ||||||  | | ||||||| ||||||| || | ||||||| |||| |||||||| ||| ||||    
T  42928974 aaaactgttcggattatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaaggaccatattaattttcttaac 42929073  T
Q  300 tctcatccttctgtttt 316  Q
    |||||| ||| ||||||    
T  42929074 tctcattcttatgtttt 42929090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 52745044 - 52744962
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttccggattttataatccggaaactt 124  Q
    |||||||  ||||| | ||||||||||||||||  ||||||| ||||||||||||||||||| ||||| ||||| | ||||||    
T  52745044 tataatctagaatgatattttcttttgttaaagtgtgaaaaaatgagtaacggatttttccgaattttgtaatctgaaaactt 52744962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 43319129 - 43319073
Alignment:
Q  366 ccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttta 423  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  43319129 ccttagaagagacttcttacgggactccgcc-ctcaaaatccaaaattccatcattta 43319073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 45567782 - 45567726
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagg 375  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||| ||| | ||||||    
T  45567782 tccgaaacttccccaaaaaatcagaaaaaattcaaggaccatgactccataagaagg 45567726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 427
Target Start/End: Complemental strand, 6099775 - 6099725
Alignment:
Q  377 acttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||| || |||| ||| |||||||||||||||| |||||||||||||    
T  6099775 acttcttatgggactctgcccctcaaaatccaaaatttaatcgtttagacc 6099725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 427
Target Start/End: Complemental strand, 6099955 - 6099905
Alignment:
Q  377 acttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||| || |||| ||| |||||||||||||||| |||||||||||||    
T  6099955 acttcttatgggactctgcccctcaaaatccaaaatttaatcgtttagacc 6099905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 316
Target Start/End: Complemental strand, 38159043 - 38159013
Alignment:
Q  286 ttaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||||||||||||||||    
T  38159043 ttaatcttcctaactctcatccttctgtttt 38159013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 427
Target Start/End: Complemental strand, 40650526 - 40650488
Alignment:
Q  389 actccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  40650526 actccgcccctcaaaatccaaaattccatcgtttagacc 40650488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 426
Target Start/End: Complemental strand, 43318920 - 43318859
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    ||||||||||| |||||||||||| |||| ||| ||||||||||||||||  ||| |||||||    
T  43318920 tcccttagaagagacttcttacgggactctgcc-ctcaaaatccaaaatttcatcatttagac 43318859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 422
Target Start/End: Complemental strand, 8704360 - 8704307
Alignment:
Q  369 tagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgttt 422  Q
    ||||||||||||||||||| ||| | || ||||||||||||||||  |||||||    
T  8704360 tagaagggacttcttacgggactacacccctcaaaatccaaaatttcatcgttt 8704307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 316
Target Start/End: Complemental strand, 45880095 - 45880062
Alignment:
Q  283 atattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||| |||||||||||||||    
T  45880095 atattaatcttcctaactttcatccttctgtttt 45880062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 316
Target Start/End: Original strand, 11844407 - 11844483
Alignment:
Q  240 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||| |||||| || ||||||| ||| |||||||| |||  |||||||||||||| ||| ||| ||| |||||||    
T  11844407 aattctgaacatgcttataacatgtataatcattttaaggagcatattaatcttccttactatcaccctcctgtttt 11844483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 355
Target Start/End: Original strand, 49677750 - 49677786
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaagg 355  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  49677750 tccgaaacttccccagaaaatcagaaaaaattcaagg 49677786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 172; Significance: 3e-92; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 8 - 316
Target Start/End: Complemental strand, 3659 - 3348
Alignment:
Q  8 attttttccaaaaatgtcctttagtttctgaattttataatccggaatggtgttttcttttgttaaaggatgaaaaa-tgagtaacggatttttc--cgg 104  Q
    |||||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||   ||     
T  3659 attttttccaaaaatgcccttgagtttccgaatcttataatccggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacgaattttttttcga 3560  T
Q  105 attttataatccggaaacttnnnnnnntagggcgcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaac 204  Q
    ||||| |||||  |||||||       ||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  3559 attttgtaatctagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacaccctttttcaaggtaaaac 3460  T
Q  205 agttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 304  Q
    ||||| ||||||||||||  || |||||| || ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  3459 agttcggattatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcattttagggacaatattaatcttcgtaactctca 3360  T
Q  305 tccttctgtttt 316  Q
    ||||||||||||    
T  3359 tccttctgtttt 3348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 3283 - 3177
Alignment:
Q  322 gaaatttccccagaaaattagaaaaaa-ttcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgt 420  Q
    |||| ||||||||||||| |||||||| || |||||||||||  |||||||||||||||||||| || || || || ||||||||||||||||| |||||    
T  3283 gaaacttccccagaaaatcagaaaaaaatttaaggaccatgacccccttagaagggacttcttatgggaccccacccctcaaaatccaaaattccatcgt 3184  T
Q  421 ttagacc 427  Q
    |||||||    
T  3183 ttagacc 3177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 142; Significance: 3e-74; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 39 - 316
Target Start/End: Complemental strand, 9728 - 9450
Alignment:
Q  39 attttataatccggaatggtgttttcttttgttaaaggatgaaaaat-gagtaacggatttttccggattttataatccggaaacttnnnnnnntagggc 137  Q
    |||| ||||| |||||| |||||||| ||||||| ||| |||||||| |||| |||| |||||||| ||||| ||||||||||||||       |||| |    
T  9728 atttcataattcggaattgtgttttcctttgttatagggtgaaaaatagagttacgggtttttccgaattttgtaatccggaaacttcaaaaaataggac 9629  T
Q  138 gcgttacatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagca 237  Q
    ||||||||||||||||  ||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||||| || ||||||||||    
T  9628 gcgttacatgatgtttccggattacataatccgaaaaccccctgaacaccctttttcaaagtaaaacagttcggattatataatccgaactgtatcagca 9529  T
Q  238 caaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
     |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||  ||||| ||||| |||||||||    
T  9528 taaattctatacatgtttgtaacatggatagtcattttatggacaatattaatatttataactttcatcattctgtttt 9450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 333 - 427
Target Start/End: Complemental strand, 9375 - 9282
Alignment:
Q  333 agaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    ||||||| ||| |||||||||||||| ||| |||||||||||| ||||||||||| |||||||| |||||||| |||||| | ||||||||||||    
T  9375 agaaaatcagagaaaattcaaggaccttgactcccttagaagg-acttcttacgggactccgcccctcaaaattcaaaataccatcgtttagacc 9282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 43 - 311
Target Start/End: Original strand, 23055 - 23303
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatgaaaaatgagtaacggatttttccggattttataatccggaaacttnnnnnnntagggcgcgtt 142  Q
    ||||||||| |||  |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||       ||||| || ||    
T  23055 tataatccgtaattatgttttcttttgttgaagggtgaaaaatgagtaacggatttttccgaattttataatccggaaacttcaaaaaatagggtgcatt 23154  T
Q  143 acatgatgtttatggattacataatccggaaaccccctaaacaccatttttcaaagtaaaacagttcagattatataatccaaattgtatcagcacaaat 242  Q
    |||||||||||  |||||| ||||||||||||||||||||||||| ||||||||| ||||||||||  |||||                    |||||||    
T  23155 acatgatgtttccggattatataatccggaaaccccctaaacaccttttttcaaaataaaacagttaggatta--------------------cacaaat 23234  T
Q  243 tctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 311  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23235 tcgaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttct 23303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 23299 - 23348
Alignment:
Q  378 cttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  23299 cttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacc 23348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 174253 - 174146
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaaaattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatc 418  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||| |||  ||||||||||||||||||  |||||||| |||||||| |||||||| |||    
T  174253 tccgaaacttccctagaaaatcagaaaaaattcaaggaccatgactcctgtagaagggacttcttacgagactccgcccctcaaaattcaaaattccatc 174154  T
Q  419 gtttagac 426  Q
    ||||||||    
T  174153 gtttagac 174146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 140620 - 140691
Alignment:
Q  245 taaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttt 316  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  140620 taaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttttgtttt 140691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 140752 - 140860
Alignment:
Q  319 tccgaaatttccccagaaaattagaaaa-aattcaaggaccatgaatcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaat 417  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||| |||| || |||||||||||||||| ||| |||| ||||||||||||| ||  ||    
T  140752 tccgaaacttccccagaaaatcagaaaaaaattcaaggaccatgactcccataaaagggacttcttacgggacttcgcccctcaaaatccaaagtttcat 140851  T
Q  418 cgtttagac 426  Q
    |||||||||    
T  140852 cgtttagac 140860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 140540 - 140612
Alignment:
Q  43 tataatccggaatggtgttttcttttgttaaaggatg-aaaaatgagtaacggatttttccggattttataat 114  Q
    |||||||||||||| ||||||||||||||||| | || |||||||||||| ||||||||||||||||| ||||    
T  140540 tataatccggaatgatgttttcttttgttaaaaggtgaaaaaatgagtaaaggatttttccggattttgtaat 140612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 59480 - 59551
Alignment:
Q  230 tatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 301  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  59480 tatcagtacaaattttaaacatgtttgtgacatggatagtcattttaaggacaatattaatctttctaactc 59551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 60029 - 59938
Alignment:
Q  210 agattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 301  Q
    ||||||||||||   || |||| ||||||||||| | |||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  60029 agattatataatatgaactgtaccagcacaaattttgaacatgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactc 59938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 9e-19; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 205842 - 205758
Alignment:
Q  233 cagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttt 317  Q
    |||||| |||||| |||||||||||||||| | ||||||||||| ||| |||||||||||||||| || |||||||| |||||||    
T  205842 cagcaccaattctgaacatgtttgtaacattggtagtcattttaaggataatattaatcttcctagctttcatccttgtgttttt 205758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 205952 - 205894
Alignment:
Q  368 ttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagacc 427  Q
    |||||| ||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||    
T  205952 ttagaaaggacttcttacgggactccgcc-ctcaaaatccaaaattccatcatttagacc 205894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 426
Target Start/End: Complemental strand, 205745 - 205684
Alignment:
Q  364 tcccttagaagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    ||||||||||| |||||||||||| ||||| || ||||||||||||||||  ||| |||||||    
T  205745 tcccttagaagagacttcttacgggactccacc-ctcaaaatccaaaatttcatcatttagac 205684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 310
Target Start/End: Complemental strand, 100982 - 100872
Alignment:
Q  200 aaaacagttcagattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    |||||||||||||||||||||| |||  |||||| | ||| ||| | ||||||||| ||||||  ||||||| |||| || | |||| ||||||||||||    
T  100982 aaaacagttcagattatataattcaacctgtatcggtacagattttgaacatgtttataacatatatagtcagtttaagggccatatcaatcttcctaac 100883  T
Q  300 tctcatccttc 310  Q
    ||  |||||||    
T  100882 tcatatccttc 100872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 4472 - 4560
Alignment:
Q  211 gattatataatccaaattgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaac 299  Q
    ||||||||||||  || |||||| ||||||||| | ||| ||||||||| || |||||||||||||  ||| |||||||||||| ||||    
T  4472 gattatataatctgaactgtatcggcacaaattttgaacctgtttgtaaaatagatagtcattttaaagaccatattaatcttcttaac 4560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 4691 - 4745
Alignment:
Q  372 aagggacttcttacggcactccgccgctcaaaatccaaaattcaatcgtttagac 426  Q
    |||||||||||||||| ||||| || ||||||||||||||||  |||||||||||    
T  4691 aagggacttcttacgggactccacccctcaaaatccaaaattacatcgtttagac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 18086 - 18052
Alignment:
Q  207 ttcagattatataatccaaattgtatcagcacaaa 241  Q
    ||||||||||||||||| |||||||||||||||||    
T  18086 ttcagattatataatccgaattgtatcagcacaaa 18052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University