View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4710R-Insertion-9 (Length: 320)
Name: NF4710R-Insertion-9
Description: NF4710R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4710R-Insertion-9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 9 - 320
Target Start/End: Complemental strand, 42178491 - 42178178
Alignment:
| Q |
9 |
gccttgaagaatatctctcaattttt-acacctaagcttgctatgacgttaatttgagtggtgcatttt-gtttcatgagcggttctatatggcatgata |
106 |
Q |
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| T |
42178491 |
gccttgaagaatatctcacaattttttacacctaagcttgctatgacgttaatttgagaggtgcatttttgtttcatgagcggttctatatggcatgata |
42178392 |
T |
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| Q |
107 |
ctctatcacacaaattgcacatgacatgaatgtgttttccatgcttgttttgcttgtctcatgaatgtgcttatgcttcttatcttatctcgtttatata |
206 |
Q |
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| T |
42178391 |
ctctatcacacaaattgcacatgacatgagtgtgttttccatgcttgttttgcttgtctcatgaatgtgcttatgcttcttatcttatctcatttatata |
42178292 |
T |
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| Q |
207 |
aagttaaaataaaaatatcttacaaaacaaattacaaatatgtgttcactgatatggacgatatacaaatatgagatgttggtagtgtttagaaactata |
306 |
Q |
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| T |
42178291 |
aatttaaaataaaaatatcttacaaaacaaattacaaatatgtgttcactgatatggacgatatacaaatatgagatgttggtagtgtttagaaactata |
42178192 |
T |
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| Q |
307 |
atcaagtgaagtgt |
320 |
Q |
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| T |
42178191 |
atcaagtgaagtgt |
42178178 |
T |
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