View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4710_low_8 (Length: 280)
Name: NF4710_low_8
Description: NF4710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4710_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 941311 - 941547
Alignment:
| Q |
18 |
aaatagaacattacttggcaacaaaataattgattattatgaatgcatatttttattgtacagatcgtatattttgtgttcactccagctcttctttata |
117 |
Q |
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| T |
941311 |
aaatagaacattacttggcaacaaaataattgattattatgaatgcatatttttattgtacagatcgtatattttgtgttcactccagctcttctttata |
941410 |
T |
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| Q |
118 |
gcagtctggcaaaaactataactttgaagagcttgattatgctgtaagttaatttgtactttcttgttattgactgtatttcattaattccatannnnnn |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
941411 |
gcagtctggcaaaaactataactttgaagagcttgattatgctgtaagttaatttgtactttcttgttattgactgtatttcattaattccatttttttt |
941510 |
T |
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| Q |
218 |
nnnatactctaatatcaaaaaatagataatgcatata |
254 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
941511 |
tttatactctaatatcaaaaaatagataatgcatata |
941547 |
T |
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