View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4710_low_9 (Length: 275)
Name: NF4710_low_9
Description: NF4710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4710_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 35 - 262
Target Start/End: Original strand, 33695092 - 33695316
Alignment:
| Q |
35 |
cagatcaacagacaaccctactatagcatcaaccgtaacaatcaatttatatataagctagctttcatcatttagttgtccttttctggaaatagtttat |
134 |
Q |
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| T |
33695092 |
cagatcaacagacaaccctactatagcatcaaccgtaacaatcaatttatatataagctagctttcatcatttagttgtccttttctggaaatagtttat |
33695191 |
T |
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| Q |
135 |
agtaacaccaatattgtggggataatttctcatataatccaccttaacacgtgattcaaaacagggtacacaaaaattagtggtggagaaacttgtgaac |
234 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
33695192 |
agtaacacca---ttgtggggataatttctcatataatccaccttaacacgtgattcaaaacagggtacacaaaaattagtggtggagaaaattgtgaac |
33695288 |
T |
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| Q |
235 |
cacactgaatcctaaaacacaaggagta |
262 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
33695289 |
cacactgaatcctaaaacacaaggagta |
33695316 |
T |
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